# terms

id: PBO:0047910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(9)(q32)","termid":"PBO:0047910"}


id: GO:0060955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neural crest cells to cardiac glial cell fates and their capacity to differentiate into cardiac glial cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac glial cell fate commitment","termid":"GO:0060953"},{"relation_name":"part_of","term_name":"neural crest-derived cardiac glial cell differentiation","termid":"GO:0060951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac glial cell fate commitment","termid":"GO:0060955"}


id: PBO:0078389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-4","termid":"PBO:0078389"}


id: PBO:0089444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent alpha-hydroxy acid dehydrogenase","termid":"PBO:0089444"}


id: PBO:0074409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 12","termid":"PBO:0074409"}


id: PR:Q9UUH4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg25 gene.","definition_xrefs":["UniProtKB:Q9UUH4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylsterol monooxygenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.08c","synonyms":[{"name":"C-4 methylsterol oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-erg25","type":"exact"}],"termid":"PR:Q9UUH4"}


id: PBO:0057746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1825","termid":"PBO:0057746"}


id: GO:0007281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell development","secondary_identifiers":["Reactome:R-HSA-9827857"],"synonyms":[{"name":"gametogenesis","type":"narrow"},{"name":"germ-cell development","type":"exact"},{"name":"primordial germ cell development","type":"narrow"}],"termid":"GO:0007281"}


id: PBO:0085050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; deletion mutant is synthetically sick or lethal with alpha-synuclein","termid":"PBO:0085050"}


id: PBO:0027287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027287"}


id: PBO:0087638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis prior to SNARE-mediated fusion; PtdIns[4,5]P2-binding protein that localizes to exocytic sites in an actin-independent manner, targeting and anchoring the exocyst with Sec3p; involved in exocyst assembly; direct downstream effector of Rho3p and Cdc42p; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0087638"}


id: MONDO:0018755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scorpion envenomation is a rare intoxication caused by a scorpion sting which typically manifests with localized pain, edema, erythema, and paresthesias at the site of the sting and, when severe, progresses to produce systemic symptoms of variable severity that include respiratory difficulties, abnormal systemic blood pressure, cardiac arrhythmia, and a combination of parasympathetic (i.e. excessive salivation and lacrimation, diaphoresis, miosis, frequent urination, diarrhea, vomiting, priapism) and sympathetic (e.g. hyperthermia, hyperglycemia, mydriasis) manifestations. Neurological manifestations may also be associated, such as abnormal eye movements, blurred vision, agitation and restlessness, as well as muscle fasciculations and spasms. Signs and symptoms are highly variable and in most severe cases may lead to cardiogenic shock and pulmonary edema.","definition_xrefs":["Orphanet:466677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scorpion envenomation","secondary_identifiers":["SCTID:217670007","GARD:21939"],"synonyms":[{"name":"poisoning caused by scorpion venom","type":"exact"},{"name":"poisoning due to scorpion venom","type":"exact"},{"name":"toxic effect of venom of scorpion","type":"exact"}],"termid":"MONDO:0018755","xrefs":{"Monarch":{"xref_id":"0018755"}}}


id: GO:0047426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + ricinine = NH3 + 3-carboxy-4-methoxy-N-methyl-2-pyridone.","definition_xrefs":["EC:3.5.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"ricinine nitrilase activity","secondary_identifiers":["RHEA:22704","MetaCyc:3.5.5.2-RXN"],"synonyms":[{"name":"ricinine aminohydrolase activity","type":"related"}],"termid":"GO:0047426"}


id: _global:has_role
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_characteristic","termid":"_global:has_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_role","secondary_identifiers":["RO:0000087"],"termid":"_global:has_role"}


id: PBO:0059002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMACHC pseudogene 1","termid":"PBO:0059002"}


id: GO:0051131
data:
  {"annotated_genes":["SJAG_00984","SJAG_01545","SJAG_03784"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92771,96257,100376],"is_not":false,"summary":null,"term":"GO:0051131"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a protein complex, mediated by chaperone molecules that do not form part of the finished complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00984":null,"SJAG_01545":null,"SJAG_03784":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"chaperone-mediated protein complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034619"],"synonyms":[{"name":"cellular chaperone-mediated protein complex assembly","type":"exact"},{"name":"chaperone activity","type":"related"},{"name":"protein complex assembly, multichaperone pathway","type":"exact"}],"termid":"GO:0051131","terms_by_termid":{"GO:0051131":null}}


id: GO:0006401
data:
  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degradation","type":"exact"}],"termid":"GO:0006401","terms_by_termid":{"GO:0000184":null,"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0000294":null,"GO:0000956":null,"GO:0000957":null,"GO:0006401":null,"GO:0006402":null,"GO:0016075":null,"GO:0016077":null,"GO:0016078":null,"GO:0031087":null,"GO:0033621":null,"GO:0036450":null,"GO:0043137":null,"GO:0043488":null,"GO:0043633":null,"GO:0043634":null,"GO:0048255":null,"GO:0060211":null,"GO:0060212":null,"GO:0060213":null,"GO:0061013":null,"GO:0061157":null,"GO:0061158":null,"GO:0070478":null,"GO:0070481":null,"GO:0070651":null,"GO:0070935":null,"GO:0070966":null,"GO:0071025":null,"GO:0071027":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0071035":null,"GO:0071036":null,"GO:0071037":null,"GO:0071038":null,"GO:0071039":null,"GO:0071040":null,"GO:0071042":null,"GO:0071044":null,"GO:0090669":null,"GO:0106354":null,"GO:0110064":null,"GO:0120271":null,"GO:0120272":null,"GO:0140746":null,"GO:0180036":null,"GO:0180037":null,"GO:1902369":null,"GO:1902373":null,"GO:1903469":null,"GO:1990074":null,"GO:2000815":null}}


id: PBO:0070200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 125 pseudogene","termid":"PBO:0070200"}


id: PBO:0056970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 26a-1","termid":"PBO:0056970"}


id: PBO:0054754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2165","termid":"PBO:0054754"}


id: GO:0090369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of ornithine carbamoyltransferase.","definition_xrefs":["GOC:jp","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0098772","GO:0004857","GO:0003674","GO:0030234","GO:0140678"],"is_obsolete":false,"name":"ornithine carbamoyltransferase inhibitor activity","termid":"GO:0090369"}


id: PR:Q10177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A divalent metal cation transporter MntH that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01796","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese transporter pdt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.08","secondary_identifiers":["UniProtKB:Q10177"],"synonyms":[{"name":"Spom972h-mntH","type":"exact"}],"termid":"PR:Q10177"}


id: GO:0040012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of locomotion of a cell or organism.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of locomotion","termid":"GO:0040012"}


id: PBO:0030067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_gluconate_carbon_source","termid":"PBO:0030067"}


id: MONDO:0020589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that arises within the myocardium or cardiac chambers. The reported cases have been teratomas and yolk sac tumors.","definition_xrefs":["NCIT:C147005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal germ cell tumor","termid":"MONDO:0018201"},{"relation_name":"is_a","term_name":"heart neoplasm","termid":"MONDO:0021209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac germ cell tumor","secondary_identifiers":["MEDGEN:1633290","UMLS:C4687640"],"synonyms":[{"name":"cardiac germ cell tumor","type":"exact"},{"name":"heart germ cell tumor","type":"exact"},{"name":"heart germ cell tumour","type":"exact"}],"termid":"MONDO:0020589","xrefs":{"Monarch":{"xref_id":"0020589"}}}


id: PBO:0027603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_spindle_microtubule_depolymerization","termid":"PBO:0027603"}


id: GO:0050087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 [Fe(III)cytochrome c] + D-mannitol = 2 [Fe(II)cytochrome c] + D-fructose + 2 H+.","definition_xrefs":["RHEA:17597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"mannitol dehydrogenase (cytochrome) activity","secondary_identifiers":["EC:1.1.2.2","MetaCyc:MANNITOL-DEHYDROGENASE-CYTOCHROME-RXN"],"synonyms":[{"name":"D-mannitol:ferricytochrome-c 2-oxidoreductase activity","type":"related"},{"name":"polyol dehydrogenase activity","type":"broad"}],"termid":"GO:0050087"}


id: PBO:0002940
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.76","termid":"PBO:0002940"}


id: FYPO:0006804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate and other catalytic properties of a 5'-deoxyribose-5-phosphate lyase activity are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal 5'-deoxyribose-5-phosphate lyase activity","synonyms":[{"name":"normal dRP lyase activity","type":"broad"},{"name":"normal dRPase activity","type":"broad"}],"termid":"FYPO:0006804"}


id: MONDO:0043707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A non-neoplastic or neoplastic disorder that affects the structures of the mediastinum. Representative examples include mediastinitis, mediastinal lipoma, mediastinal schwannoma, thymoma, and mediastinal lymphoma.","definition_xrefs":["NCIT:C26826"],"gene_count":0,"genotype_count":0,"name":"obsolete mediastinal disorder (obsolete MONDO:0043707)","secondary_identifiers":["MESH:D008477","SCTID:49483002"],"synonyms":[{"name":"disease of mediastinum","type":"exact"},{"name":"disease or disorder of mediastinum","type":"exact"},{"name":"disease, mediastinal","type":"related"},{"name":"diseases, mediastinal","type":"related"},{"name":"disorder of mediastinum","type":"exact"},{"name":"mediastinal disease","type":"exact"},{"name":"mediastinal disorder","type":"exact"},{"name":"mediastinum disease","type":"exact"},{"name":"mediastinum disease or disorder","type":"exact"}],"termid":"MONDO:0043707","xrefs":{"Monarch":{"xref_id":"0043707"}}}


id: GO:0031943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of glucocorticoid metabolic process","synonyms":[{"name":"regulation of glucocorticoid metabolism","type":"exact"}],"termid":"GO:0031943"}


id: PBO:0072869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine N1-acetyltransferase family member 2","termid":"PBO:0072869"}


id: GO:0090615
data:
  {"annotated_genes":["SJAG_00797","SJAG_04377","SJAG_00428","SJAG_00077","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89468,95754,103417,110059],"is_not":false,"summary":null,"term":"GO:0090615"},{"annotations":[109358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140040"}]},"cv_name":"biological_process","definition":"Steps involved in processing precursor RNAs arising from transcription of operons in the mitochondrial genome into mature mRNAs.","definition_xrefs":["PMID:25181358","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"mitochondrial RNA processing","termid":"GO:0000963"},{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00428":null,"SJAG_00797":null,"SJAG_04377":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"mitochondrial mRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090615","terms_by_termid":{"GO:0090615":null,"GO:0140040":null}}


id: RO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_ends","termid":"RO:0002084"}


id: MONDO:0016713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare Ewing sarcoma/peripheral primitive neuroectodermal tumor that affects the central nervous system either as a primary dural neoplasm or by direct extension from adjacent soft tissues or bone.","definition_xrefs":["NCIT:C129537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0021038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","secondary_identifiers":["UMLS:C4329632","MEDGEN:1389430","Orphanet:251870","MedDRA:10057846","GARD:20718"],"synonyms":[{"name":"CNS PNET","type":"related"},{"name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","type":"exact"},{"name":"central nervous system PNET","type":"broad"},{"name":"central nervous system primitive neuroectodermal tumor","type":"related"},{"name":"central nervous system primitive neuroectodermal tumour","type":"related"}],"termid":"MONDO:0016713","xrefs":{"Monarch":{"xref_id":"0016713"}}}


id: PBO:0114496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs; receives sulfur from the E1-like enzyme Uba4p and transfers it to tRNA; functions as a protein tag involved in the urmylation of proteins involved in nutrient sensing and the oxidative stress response; regulates stress-dependent condensate formation, promoting phase separation of numerous proteins to promote stress resilience and survival; forms co-condensates with Uba4p resulting in increased target urmylation","termid":"PBO:0114496"}


id: GO:0005581
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures.","definition_xrefs":["GOC:mah","ISBN:0721639976","PMID:21421911","GOC:dos","PMID:19693541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen trimer","secondary_identifiers":["Wikipedia:Collagen"],"termid":"GO:0005581"}


id: PBO:0000192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein Asl1, predicted O-glucosyl hydrolase","termid":"PBO:0000192"}


id: FYPO:0000717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to actinomycin D. Cells stop growing (and may die) at a concentration of actinomycin D that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to actinomycin D","synonyms":[{"name":"hypersensitive to actinomycin D","type":"exact"},{"name":"sensitive to actinomycin D during mitotic cell cycle","type":"related"},{"name":"sensitive to actinomycin D during vegetative growth","type":"exact"}],"termid":"FYPO:0000717"}


id: MONDO:0018312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by the fungus Histoplasma capsulatum. It primarily affects the lungs but can also occur as a disseminated disease that affects additional organs. The acute respiratory disease has symptoms similar to those of a cold or flu and it usually resolves without treatment in healthy individuals. The disseminated form is generally fatal if untreated.","definition_xrefs":["NCIT:C77201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary systemic mycosis","termid":"MONDO:0000308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histoplasmosis","secondary_identifiers":["ICD9:115.99","icd11.foundation:1553838370","GARD:18692","SCTID:12962009","UMLS:C0019655","MEDGEN:42468","EFO:0007310","MedDRA:10021808","MESH:D006660","DOID:1731","ICD10CM:B39","MESH:C538362","MedDRA:10020141","ICD9:115.9","ICD9:115.90","Orphanet:390","icd11.foundation:1303003466","ICD9:115"],"synonyms":[{"name":"Histoplasma caused disease or disorder","type":"exact"},{"name":"Histoplasma disease or disorder","type":"exact"},{"name":"Histoplasma infectious disease","type":"exact"},{"name":"darling disease","type":"exact"}],"termid":"MONDO:0018312","xrefs":{"Monarch":{"xref_id":"0018312"}}}


id: PBO:0080847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 2","termid":"PBO:0080847"}


id: MONDO:0018304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, underdiagnosed disorder in adults characterized by recurrent febrile rash, bone and/or joint pain, enlarged lymph nodes, fatigue, a monoclonal IgM component, leukocytosis and systemic inflammatory response.","definition_xrefs":["Orphanet:37748"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type IV hypersensitivity disease","termid":"MONDO:0002459"},{"relation_name":"excluded_subClassOf","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"excluded_subClassOf","term_name":"unexplained periodic fever syndrome","termid":"MONDO:0015158"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schnitzler syndrome","secondary_identifiers":["MedDRA:10062908","DOID:4371","GARD:12390","ICD9:708.8","NORD:1696","icd11.foundation:1867840545","EFO:1001165","MESH:D019873","MEDGEN:141892","SCTID:402415001","UMLS:C0524988"],"synonyms":[{"name":"chronic urticaria with gammapathy","type":"related"},{"name":"chronic urticaria with gammopathy","type":"exact"},{"name":"chronic urticaria with macroglobulinemia","type":"exact"}],"termid":"MONDO:0018304","xrefs":{"Monarch":{"xref_id":"0018304"}}}


id: PBO:0085082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear dsRNA-specific ribonuclease (RNase III); involved in rDNA transcription, rRNA processing and U2 snRNA 3' end formation by cleavage of a stem-loop structure at the 3' end of U2 snRNA; involved in polyadenylation-independent transcription termination; involved in the cell wall stress response, regulating the degradation of cell wall integrity and morphogenesis checkpoint genes","termid":"PBO:0085082"}


id: GO:1900884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tridecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tridecane metabolic process","termid":"GO:1900893"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"tridecane biosynthetic process","termid":"GO:1900632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tridecane biosynthetic process","synonyms":[{"name":"regulation of tridecane anabolism","type":"exact"},{"name":"regulation of tridecane biosynthesis","type":"exact"},{"name":"regulation of tridecane formation","type":"exact"},{"name":"regulation of tridecane synthesis","type":"exact"}],"termid":"GO:1900884"}


id: MONDO:0016752
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86838,86839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of cranial and spinal nerves","termid":"MONDO:0016749"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"benign peripheral nerve sheath tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:252131","UMLS:C5577926","MEDGEN:1843306"],"synonyms":[{"name":"BPNST","type":"exact"}],"termid":"MONDO:0016752","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0016752"}}}


id: MONDO:0020399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoplasia of the mitral valve annulus is a rare, congenital, mitral valve malformation characterized by hypoplastic annulus which usually appears within a complete mitral valve hypoplasia, causing mitral valve stenosis. Association with other cardiac malformation is common, including coarctation of the aorta, aortic valve stenosis, Shone complex and hypoplastic left heart syndrome.","definition_xrefs":["Orphanet:99058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypoplasia of the mitral valve annulus","secondary_identifiers":["MEDGEN:757607","SCTID:449270002","UMLS:C3165203","ICD9:746.89","ICD10CM:Q23.2","GARD:19625"],"termid":"MONDO:0020399","xrefs":{"Monarch":{"xref_id":"0020399"}}}


id: PBO:0040956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 27","termid":"PBO:0040956"}


id: PBO:0000972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II complex subunit Rpb11","termid":"PBO:0000972"}


id: PBO:0057551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 664b","termid":"PBO:0057551"}


id: PBO:0016910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug103","termid":"PBO:0016910"}


id: GO:1990711
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex that inhibits binding of Tcf to beta-catenin while preserving interaction of catenin with cadherin thus inhibiting transcription mediated by beta-catenin-Tcf complex.","definition_xrefs":["PMID:12408824","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"beta-catenin-ICAT complex","synonyms":[{"name":"CTNNB1-CTNNBIP1 complex","type":"exact"}],"termid":"GO:1990711"}


id: PBO:0054956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2370","termid":"PBO:0054956"}


id: PBO:0062643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily M member 1 pseudogene","termid":"PBO:0062643"}


id: PBO:0027874
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027874"}


id: PBO:0070083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 40, pseudogene","termid":"PBO:0070083"}


id: PBO:0039819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor GTPase activating protein 3","termid":"PBO:0039819"}


id: GO:0004470
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"malic enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyruvic-malic carboxylase activity","type":"related"}],"termid":"GO:0004470","terms_by_termid":{"GO:0004471":null}}


id: MONDO:0015329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation syndrome with short stature (obsolete MONDO:0015329)","secondary_identifiers":["SCTID:205808005","Orphanet:139021"],"synonyms":[{"name":"congenital malformation syndrome and short stature","type":"exact"},{"name":"congenital malformation syndrome associated with short stature","type":"exact"},{"name":"malformation syndrome associated with short stature","type":"exact"}],"termid":"MONDO:0015329","xrefs":{"Monarch":{"xref_id":"0015329"}}}


id: GO:0120212
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A centrosome-based structure consisting of two cylindrical microtubule-based centrioles and associated components which anchors the flagellum to the sperm head.","definition_xrefs":["PMID:24415959","GOC:krc","PMID:30032984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm head-tail coupling apparatus","secondary_identifiers":["MP:0009830"],"synonyms":[{"name":"HTCA","type":"related"},{"name":"head-tail coupling apparatus","type":"exact"},{"name":"implantation fossa","type":"related"},{"name":"sperm connecting piece","type":"related"},{"name":"sperm neck","type":"related"}],"termid":"GO:0120212"}


id: GO:0061819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of small fragments of circular extrachromosomal DNA elements which contain telomeric DNA. It is speculated that telomeric DNA-containing double minutes are formed through a recombination event between the telomere and chromosome-internal TTAGGG-like sequences. Telomeric DNA-containing double minutes appear as two closely positioned dots in metaphase.","definition_xrefs":["GOC:BHF_telomere","PMID:14690602","PMID:2397458","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310","GO:0032200"],"is_obsolete":false,"name":"telomeric DNA-containing double minutes formation","synonyms":[{"name":"TDMs formation","type":"exact"}],"termid":"GO:0061819"}


id: GO:1905506
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any plastid stroma that is part of a gerontoplast.","definition_xrefs":["GOC:TermGenie","GOC:mag","GO_REF:0000064","PMID:11212360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"gerontoplast","termid":"GO:0034400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"gerontoplast stroma","termid":"GO:1905506"}


id: PBO:0076414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 7 like","termid":"PBO:0076414"}


id: MONDO:0958117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"},{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"autosomal dominant combined immunodeficiency due to partial IL6ST deficiency","secondary_identifiers":["Orphanet:656313"],"termid":"MONDO:0958117","xrefs":{"Monarch":{"xref_id":"0958117"}}}


id: PBO:0005660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I upstream activation factor complex subunit Spp27","termid":"PBO:0005660"}


id: MONDO:1012943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in cattle due to a mutation in the ANKRD28 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, ANKRD28-related, cattle","secondary_identifiers":["OMIA:002596-9913"],"termid":"MONDO:1012943","xrefs":{"Monarch":{"xref_id":"1012943"}}}


id: MONDO:0018053
data:
  {"annotated_genes":["SJAG_00159","SJAG_01207","SJAG_01159","SJAG_00995","SJAG_01235","SJAG_03112","SJAG_01797","SJAG_03206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011125"},{"annotations":[84822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014615"},{"annotations":[84823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014619"},{"annotations":[84836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010495"},{"annotations":[85155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014841"},{"annotations":[86506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032806"},{"annotations":[85629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030517"},{"annotations":[85634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030518"}]},"cv_name":"mondo","definition":"Trichothiodystrophy or TTD is a heterogeneous group disorders characterized by short, brittle hair with low-sulphur content (due to an abnormal synthesis of the sulfur containing keratins).","definition_xrefs":["Orphanet:33364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00159":null,"SJAG_00995":null,"SJAG_01159":null,"SJAG_01207":null,"SJAG_01235":null,"SJAG_01797":null,"SJAG_03112":null,"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1366758649","SCTID:723551003","NANDO:1200627","NORD:1292","UMLS:C1955934","GARD:12109","NCIT:C4924","DOID:0111866","MedDRA:10044628","OMIMPS:601675","MEDGEN:363064"],"synonyms":[{"name":"trichothiodystrophy syndrome","type":"exact"}],"termid":"MONDO:0018053","terms_by_termid":{"MONDO:0010495":null,"MONDO:0011125":null,"MONDO:0014615":null,"MONDO:0014619":null,"MONDO:0014841":null,"MONDO:0030517":null,"MONDO:0030518":null,"MONDO:0032806":null},"xrefs":{"Monarch":{"xref_id":"0018053"}}}


id: GO:0061118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"regulates","term_name":"chemotaxis to cAMP","termid":"GO:0043327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis to cAMP","termid":"GO:0061118"}


id: PBO:0065956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD21 pseudogene 1","termid":"PBO:0065956"}


id: PBO:0051629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILVBL antisense RNA 1","termid":"PBO:0051629"}


id: GO:0085004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the haustorium, a projection from a cell or tissue that penetrates the host's cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from haustorium (obsolete GO:0085004)","termid":"GO:0085004"}


id: GO:0039581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host PKR (protein kinase regulated by RNA) activity by binding to double-stranded RNA (dsRNA). Binding of viral proteins to RNA may sequester or alter the RNA so it can not be recognized by host PKR, or may compete with PKR for dsRNA binding.","definition_xrefs":["PMID:7514679"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host PKR activity via double-stranded RNA binding (obsolete GO:0039581)","synonyms":[{"name":"suppression by virus of host PKR activity by binding to dsRNA","type":"exact"}],"termid":"GO:0039581"}


id: MONDO:1011618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Waardenburg syndrome that occurs in golden hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome, non-human animal","termid":"MONDO:1011447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, golden hamster","secondary_identifiers":["OMIA:001059-10036"],"termid":"MONDO:1011618","xrefs":{"Monarch":{"xref_id":"1011618"}}}


id: PBO:0068235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal N1","termid":"PBO:0068235"}


id: PBO:0011432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Sos7","termid":"PBO:0011432"}


id: GO:0140206
data:
  {"annotated_genes":["SJAG_01983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102495],"is_not":false,"summary":null,"term":"GO:0140206"}]},"cv_name":"biological_process","definition":"The directed movement of a dipeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:22226946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dipeptide transmembrane transport","termid":"GO:0035442"},{"relation_name":"is_a","term_name":"oligopeptide import across plasma membrane","termid":"GO:0140205"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"dipeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140206","terms_by_termid":{"GO:0140206":null}}


id: PBO:0003714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vezatin family","termid":"PBO:0003714"}


id: FYPO:0004529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial translation","synonyms":[{"name":"normal mitochondrial protein biosynthesis","type":"exact"},{"name":"normal mitochondrial protein synthesis","type":"exact"},{"name":"normal mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial translation during vegetative growth","type":"exact"}],"termid":"FYPO:0004529"}


id: GO:0033945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of cellobiose from the reducing end of xyloglucans consisting of a beta-(1->4) linked glucan carrying alpha-D-xylosyl groups on O-6 of the glucose residues. To be a substrate, the first residue must be unsubstituted, the second residue may bear a xylosyl group, whether further glycosylated or not, and the third residue, which becomes the new terminus by the action of the enzyme, is preferably xylosylated, but this xylose residue must not be further substituted.","definition_xrefs":["EC:3.2.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"oligoxyloglucan reducing-end-specific cellobiohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.150-RXN"],"synonyms":[{"name":"oligoxyloglucan reducing end-specific cellobiohydrolase activity","type":"related"},{"name":"oligoxyloglucan reducing-end cellobiohydrolase activity","type":"related"}],"termid":"GO:0033945"}


id: GO:0120105
data:
  {"annotated_genes":["SJAG_00807","SJAG_03379","SJAG_02278","SJAG_00082","SJAG_01889","SJAG_00268","SJAG_03625","SJAG_04597","SJAG_00845","SJAG_02831","SJAG_03631","SJAG_03703","SJAG_03564","SJAG_01787","SJAG_03704","SJAG_03145","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87788,89495,90279,93911,94439,95348,95821,96703,100423,103181,105671,108518,110248,111746,112797,117313,117330],"is_not":false,"summary":null,"term":"GO:0120105"}]},"cv_name":"cellular_component","definition":"The region of the mitotic actomyosin ring in between the proximal layer and the actin filament layer. This region contains the accessory protein network, some actin filaments and connections between the proximal layer and the actin filament layer.","definition_xrefs":["GOC:krc","GOC:vw","PMID:28914606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring","termid":"GO:0110085"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00268":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_02278":null,"SJAG_02392":null,"SJAG_02831":null,"SJAG_03145":null,"SJAG_03379":null,"SJAG_03564":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0070938"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737","GO:0070938","GO:0015629"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring, intermediate layer","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actomyosin contractile ring, intermediate layer","type":"exact"}],"termid":"GO:0120105","terms_by_termid":{"GO:0120105":null}}


id: MONDO:1011866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myeloencephalopathy, non-human animal","secondary_identifiers":["OMIA:001163"],"termid":"MONDO:1011866","xrefs":{"Monarch":{"xref_id":"1011866"}}}


id: PBO:0070114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 28 pseudogene","termid":"PBO:0070114"}


id: PBO:0081682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 603, pseudogene","termid":"PBO:0081682"}


id: SO:0000498
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"12 or 23 nucleotide spacer between the 5' D-heptamer (SO:0000496) and 5' D-nonamer (SO:0000497) of a 5' D-recombination signal sequence (SO:0000556) of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"five_prime_D_recombination_signal_sequence","termid":"SO:0000556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_D_spacer","synonyms":[{"name":"5'-SPACER","type":"exact"},{"name":"five prime D spacer","type":"exact"},{"name":"five prime D-spacer","type":"exact"}],"termid":"SO:0000498"}


id: MONDO:0007478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant form of Kenny-Caffey Syndrome due to mutation(s) in the FAM111A gene, encoding protein FAM111A. This condition is characterized by transient hypocalcemia, delayed closure of the anterior fontanel, eye anomalies, including microphthalmia, proportionate short stature, and cortical thickening and medullary stenosis of the tubular bones.","definition_xrefs":["NCIT:C130993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Kenny-Caffey syndrome","termid":"MONDO:0016516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Kenny-Caffey syndrome","secondary_identifiers":["GARD:83","UMLS:C4316787","OMIM:127000","MEDGEN:1373312","DOID:0080723","Orphanet:93325"],"synonyms":[{"name":"KCS2","type":"related"},{"name":"Kenny syndrome","type":"broad"},{"name":"Kenny-Caffey syndrome type 2","type":"exact"},{"name":"Kenny-Caffey syndrome, autosomal dominant","type":"exact"},{"name":"Kenny-Caffey syndrome, type 2","type":"related"},{"name":"dwarfism, cortical thickening of tubular bones and transient hypocalcemia","type":"related"},{"name":"dwarfism, cortical thickening of tubular bones, and transient hypocalcemia","type":"related"}],"termid":"MONDO:0007478","xrefs":{"Monarch":{"xref_id":"0007478"}}}


id: PBO:0039637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase O (putative)","termid":"PBO:0039637"}


id: MONDO:0031028
data:
  {"annotated_genes":["SJAG_00567","SJAG_03634","SJAG_03278"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86377,86378,86379],"is_not":false,"summary":null,"term":"MONDO:0031028"}]},"cv_name":"mondo","definition":"A developmental and epileptic encephalopathy characterized by onset of seizures and pituitary insufficiency in the first weeks or months of life with profoundly impaired development that has material basis in homozygous or compound heterozygous mutation in the HID1 gene on chromosome 17q25.","definition_xrefs":["DOID:0070391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00567":null,"SJAG_03278":null,"SJAG_03634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 105 with hypopituitarism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823963","OMIM:619983","UMLS:C5774190"],"synonyms":[{"name":"DEE105","type":"exact"},{"name":"developmental and epileptic encephalopathy 105 with hypopituitarism","type":"exact"}],"termid":"MONDO:0031028","terms_by_termid":{"MONDO:0031028":null},"xrefs":{"Monarch":{"xref_id":"0031028"}}}


id: PBO:0087260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase involved in vacuolar protein sorting; functions as a membrane-associated complex with Vps34p; active form recruits Vps34p to the Golgi membrane; interacts with the GDP-bound form of Gpa1p; myristoylated; a fraction is localized, with Vps34p, to nuclear pores at nucleus-vacuole junctions and may facilitate transcription elongation for genes positioned at the nuclear periphery","termid":"PBO:0087260"}


id: PBO:0083758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential Fe-S protein; required for ribosome biogenesis, translation initiation/termination; facilitates binding of multifactor complex (MFC) of initiation factors to small ribosomal subunit; Dom34-Hbs1 complex and Rli1p work in dissociating inactive ribosomes, thereby facilitating translation restart; forms complex with Lto1p and Yae1p; dependency on ROS-labile FeS clusters, activity in nuclear ribosomal-subunit export impaired by mild oxidative stress","termid":"PBO:0083758"}


id: PR:O14345
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A palmitoyltransferase ZDHHC21 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02966","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase pfa3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.15c","secondary_identifiers":["UniProtKB:O14345"],"synonyms":[{"name":"Spom972h-ZDHHC21","type":"exact"},{"name":"protein fatty acyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14345"}


id: GO:0097223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a sperm, a mature male germ cell that develops from a spermatid.","definition_xrefs":["GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete sperm part (obsolete GO:0097223)","termid":"GO:0097223"}


id: PBO:0078715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (CAG) 3-1","termid":"PBO:0078715"}


id: PBO:0084382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity Fe(II) transporter of the plasma membrane","termid":"PBO:0084382"}


id: PBO:0111879
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telobox motif","termid":"PBO:0111879"}


id: MONDO:0016948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 11","termid":"MONDO:0016932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 11","secondary_identifiers":["GARD:20868","UMLS:C5679716","Orphanet:262785","MEDGEN:1825972"],"synonyms":[{"name":"partial duplication of chromosome 11p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 11","type":"exact"},{"name":"partial trisomy of chromosome 11p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 11","type":"exact"}],"termid":"MONDO:0016948","xrefs":{"Monarch":{"xref_id":"0016948"}}}


id: PR:000037503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein Crb2 that is phosphorylated at two conserved SQ/TQ motifs in the N-terminal region. Example: UniProtKB:P87074-1, Thr-73, MOD:00047|Ser-80, MOD:00046.","definition_xrefs":["PMID:22792081","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein Crb2 (Schizosaccharomyces pombe)","termid":"PR:000029999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crb2/Phos(T73,S80)","pombase_gene_id":"SPBC342.05","synonyms":[{"name":"Crb2 phosphorylated","type":"related"},{"name":"DNA repair protein rhp9 phosphorylated 2 (Schizosaccharomyces pombe)","type":"related"},{"name":"PomBase_original_PRO_term_name: DNA repair protein Crb2 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rhp9/Phos:2","type":"exact"},{"name":"crb2/Phos(T73,S80)","type":"exact"}],"termid":"PR:000037503"}


id: PBO:0028254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitotic_G2_phase","termid":"PBO:0028254"}


id: GO:0045653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of megakaryocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"regulation of megakaryocyte differentiation","termid":"GO:0045652"},{"relation_name":"negatively_regulates","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of megakaryocyte differentiation","synonyms":[{"name":"down regulation of megakaryocyte differentiation","type":"exact"},{"name":"down-regulation of megakaryocyte differentiation","type":"exact"},{"name":"downregulation of megakaryocyte differentiation","type":"exact"},{"name":"inhibition of megakaryocyte differentiation","type":"narrow"}],"termid":"GO:0045653"}


id: SO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute to describe a feature that is independently known - not predicted.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"independently_known","synonyms":[{"name":"independently known","type":"exact"}],"termid":"SO:0000906"}


id: GO:0061414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of a nonfermentable carbon source leads to an increase of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["PMID:19686338","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"},{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source","termid":"GO:0061413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source","termid":"GO:0061414"}


id: MONDO:0010250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 49","secondary_identifiers":["OMIM:300114","UMLS:C0796221","Orphanet:485350","DOID:0112060","GARD:17880","MEDGEN:923000"],"synonyms":[{"name":"CLCN4-related X-linked intellectual disability syndrome","type":"exact"},{"name":"MRX49","type":"exact"},{"name":"Raynaud-Claes syndrome, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked 15","type":"exact"},{"name":"intellectual disability, X-linked 49","type":"exact"},{"name":"mental retardation, X-linked 15","type":"exact"},{"name":"mental retardation, X-linked 49","type":"related"}],"termid":"MONDO:0010250","xrefs":{"Monarch":{"xref_id":"0010250"}}}


id: SO:0000750
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin_of_replication that is used for the amplification of a chromosomal nucleic acid sequence.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amplification_origin","synonyms":[{"name":"amplification origin","type":"exact"}],"termid":"SO:0000750"}


id: GO:0015532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: alpha-ketoglutarate(out) + H+(out) = alpha-ketoglutarate(in) + H+(in).","definition_xrefs":["TC:2.A.1.6.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transmembrane transporter activity","termid":"GO:0015139"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"alpha-ketoglutarate:proton symporter activity","synonyms":[{"name":"2-oxoglutarate:hydrogen symporter activity","type":"exact"},{"name":"2-oxoglutarate:proton symporter activity","type":"exact"},{"name":"alpha-ketoglutarate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015532"}


id: PBO:0062219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AO member 1 pseudogene","termid":"PBO:0062219"}


id: MONDO:0009752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropathy, painful","secondary_identifiers":["UMLS:C1850383","OMIM:256870","MEDGEN:342490","MESH:C564945"],"synonyms":[{"name":"neuropathy, painful","type":"exact"}],"termid":"MONDO:0009752","xrefs":{"Monarch":{"xref_id":"0009752"}}}


id: GO:0060344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the liver. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"liver trabecula formation","synonyms":[{"name":"liver trabecula biogenesis","type":"related"},{"name":"liver trabeculation","type":"exact"}],"termid":"GO:0060344"}


id: MONDO:0009957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reese retinal dysplasia","secondary_identifiers":["UMLS:C1849450","MEDGEN:341456","OMIM:266400","MESH:C564854"],"synonyms":[{"name":"Reese retinal dysplasia","type":"exact"}],"termid":"MONDO:0009957","xrefs":{"Monarch":{"xref_id":"0009957"}}}


id: PBO:0061380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 40","termid":"PBO:0061380"}


id: GO:0090398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell aging process stimulated in response to cellular stress, whereby normal cells lose the ability to divide through irreversible cell cycle arrest.","definition_xrefs":["PMID:28682291","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular senescence","secondary_identifiers":["Reactome:R-HSA-2559583"],"termid":"GO:0090398"}


id: PBO:0087587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the APT subcomplex of cleavage and polyadenylation factor; may have a role in 3' end formation of both polyadenylated and non-polyadenylated RNAs; SYC1 has a paralog, YSH1, that arose from the whole genome duplication","termid":"PBO:0087587"}


id: PBO:0061492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of interferon response","termid":"PBO:0061492"}


id: MONDO:0044067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection by any of the Candida species in a sterile body compartment.","definition_xrefs":["NCIT:C116813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidiasis, invasive","secondary_identifiers":["MEDGEN:296300","MESH:D058365","Orphanet:636945","UMLS:C1609535"],"synonyms":[{"name":"candidiases, invasive","type":"exact"},{"name":"invasive candidiases","type":"exact"},{"name":"invasive candidiasis","type":"exact"}],"termid":"MONDO:0044067","xrefs":{"Monarch":{"xref_id":"0044067"}}}


id: GO:0008733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinose = L-ribulose.","definition_xrefs":["RHEA:14821","EC:5.3.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-arabinose isomerase activity","secondary_identifiers":["MetaCyc:ARABISOM-RXN","KEGG_REACTION:R01761"],"synonyms":[{"name":"L-arabinose aldose-ketose-isomerase activity","type":"related"},{"name":"L-arabinose ketol-isomerase activity","type":"related"}],"termid":"GO:0008733"}


id: PBO:0074875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 57","termid":"PBO:0074875"}


id: GO:0016061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of light-activated channel activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of light-activated channel activity (obsolete GO:0016061)","termid":"GO:0016061"}


id: GO:1901552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell development.","definition_xrefs":["GOC:pr","GOC:TermGenie","PMID:19470579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of endothelial cell development","termid":"GO:1901550"},{"relation_name":"positively_regulates","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell development","synonyms":[{"name":"activation of endothelial cell development","type":"narrow"},{"name":"up regulation of endothelial cell development","type":"exact"},{"name":"up-regulation of endothelial cell development","type":"exact"},{"name":"upregulation of endothelial cell development","type":"exact"}],"termid":"GO:1901552"}


id: PBO:0075623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBF pathway regulator in golgi 1","termid":"PBO:0075623"}


id: PBO:0004215
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.2.2","termid":"PBO:0004215"}


id: PBO:0077548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 256 pseudogene 1","termid":"PBO:0077548"}


id: PBO:0034301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tributary_of","termid":"PBO:0034301"}


id: PBO:0068669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 50, pseudogene","termid":"PBO:0068669"}


id: PBO:0049714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 2","termid":"PBO:0049714"}


id: PR:Q9P7Q9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alg9 gene.","definition_xrefs":["UniProtKB:Q9P7Q9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase alg9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.05","synonyms":[{"name":"Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-alg9","type":"exact"},{"name":"asparagine-linked glycosylation protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7Q9"}


id: PBO:0013790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumerate reductase Osm1 (predicted)","termid":"PBO:0013790"}


id: PBO:0070187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 105 pseudogene","termid":"PBO:0070187"}


id: PBO:0061854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin 4","termid":"PBO:0061854"}


id: PATO:0000540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000540 flooding sensitivity value (obsolete PATO:0000540)","termid":"PATO:0000540"}


id: GO:0071870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catecholamine stimulus. A catecholamine is any of a group of biogenic amines that includes 4-(2-aminoethyl)pyrocatechol [4-(2-aminoethyl)benzene-1,2-diol] and derivatives formed by substitution.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to monoamine stimulus","termid":"GO:0071868"},{"relation_name":"is_a","term_name":"response to catecholamine","termid":"GO:0071869"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to catecholamine stimulus","termid":"GO:0071870"}


id: PBO:0063877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class F pseudogene 3","termid":"PBO:0063877"}


id: PBO:0069646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 923, pseudogene","termid":"PBO:0069646"}


id: PBO:0060956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor beta","termid":"PBO:0060956"}


id: PBO:0079403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 6 class V pseudogene 1","termid":"PBO:0079403"}


id: MONDO:0009176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inherited genodermatosis characterized by chronic infection with human papillomavirus (HPV) leading to polymorphous cutaneous lesions and high risk of developing non melanoma skin cancer.","definition_xrefs":["Orphanet:302"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"epidermodysplasia verruciformis","secondary_identifiers":["DOID:13777","UMLS:C0014522","MedDRA:10052339","MESH:D004819","MEDGEN:41831","ICD9:078.19","icd11.foundation:1191479808","NANDO:2200768","NCIT:C126877","ICD9:757.8","GARD:6357","SCTID:19138001"],"synonyms":[{"name":"EV","type":"related"},{"name":"Lewandowsky-Lutz dysplasia","type":"exact"},{"name":"Lewandowsky-Lutz syndrome","type":"exact"},{"name":"Lutz-Lewandowsky epidermodysplasia verruciformis","type":"exact"},{"name":"epidermodysplasia verruciformis","type":"exact"},{"name":"ever","type":"related"}],"termid":"MONDO:0009176","xrefs":{"Monarch":{"xref_id":"0009176"}}}


id: MONDO:0019502
data:
  {"annotated_genes":["SJAG_03635","SJAG_03333","SJAG_01826","SJAG_04704","SJAG_03032","SJAG_04654","SJAG_03448","SJAG_04119","SJAG_04321","SJAG_01070","SJAG_01465","SJAG_04084","SJAG_04640","SJAG_02042","SJAG_01625","SJAG_04645","SJAG_01570","SJAG_03147","SJAG_00898","SJAG_02717","SJAG_01991","SJAG_02099","SJAG_00325","SJAG_00886","SJAG_01536","SJAG_03286","SJAG_04358","SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[84649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014648"},{"annotations":[84613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0040500"},{"annotations":[85797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032662"},{"annotations":[85575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032665"},{"annotations":[86482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032789"},{"annotations":[86617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030533"},{"annotations":[85932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957288"},{"annotations":[86618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958204"},{"annotations":[86017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013173"},{"annotations":[85475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013528"},{"annotations":[85927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014348"},{"annotations":[85816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014409"},{"annotations":[86610,86611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012613"},{"annotations":[84650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014649"},{"annotations":[85347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014815"},{"annotations":[86673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014930"},{"annotations":[86539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014996"},{"annotations":[86383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015020"},{"annotations":[86221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044313"},{"annotations":[85871,85869,85870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020850"},{"annotations":[86612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012615"},{"annotations":[85839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[86429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[85334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013624"}]},"cv_name":"mondo","definition":"Autosomal 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id: MONDO:0021240
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the tongue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tongue neoplasm","secondary_identifiers":["NCIT:C3416","SCTID:126778001","EFO:0003871","MEDGEN:52778","UMLS:C0040411"],"synonyms":[{"name":"neoplasm of the tongue","type":"exact"},{"name":"neoplasm of tongue","type":"exact"},{"name":"tongue neoplasm (disease)","type":"exact"},{"name":"tongue tumor","type":"exact"},{"name":"tongue tumour","type":"exact"},{"name":"tumor of the tongue","type":"exact"},{"name":"tumor of tongue","type":"exact"},{"name":"tumour of the tongue","type":"exact"},{"name":"tumour of tongue","type":"exact"}],"termid":"MONDO:0021240","xrefs":{"Monarch":{"xref_id":"0021240"}}}


id: GO:0120106
data:
  {"annotated_genes":["SJAG_03145","SJAG_03703","SJAG_02266","SJAG_03088","SJAG_01665"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100021,100189,104612,108517,117312],"is_not":false,"summary":null,"term":"GO:0120106"}]},"cv_name":"cellular_component","definition":"The region of the mitotic actomyosin ring containing actin filaments and cross linkers, myosin motors, and connections to the plasma membrane through the intermediate layer. It is further from the plasma membrane than the intermediate layer which it is adjacent to.","definition_xrefs":["PMID:28914606","GOC:vw","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring","termid":"GO:0110085"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01665":null,"SJAG_02266":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0070938"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0015629","GO:0005575","GO:0070938"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring, distal actin filament layer","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actomyosin contractile ring, distal actin filament layer","type":"exact"}],"termid":"GO:0120106","terms_by_termid":{"GO:0120106":null}}


id: PBO:0070273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 8","termid":"PBO:0070273"}


id: MONDO:0006279
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A rare, aggressive, poorly differentiated, non-small cell lung carcinoma characterized by the presence of a sarcomatoid component often associated with giant cell differentiation. There is a male to female ratio of 4:1. Clinical symptoms include cough, hemoptysis, chest pain, progressive dyspnea and fever secondary to recurrent pneumonia. Cigarette smoking is a major risk factor.","definition_xrefs":["NCIT:C45540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"},{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung sarcomatoid carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:353871","SCTID:707460002","UMLS:C1708781","DOID:0080777","EFO:1000336","ICD9:162.9","ONCOTREE:SARCL"],"synonyms":[{"name":"lung sarcomatoid carcinoma","type":"exact"},{"name":"sarcomatoid carcinoma of the lung","type":"related"}],"termid":"MONDO:0006279","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0006279"}}}


id: PBO:0050185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 2","termid":"PBO:0050185"}


id: PBO:0057232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 411","termid":"PBO:0057232"}


id: PBO:0110354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 pseudogene 1","termid":"PBO:0110354"}


id: MONDO:0020847
data:
  {"annotated_genes":["SJAG_00170"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85874],"is_not":false,"summary":null,"term":"MONDO:0020847"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 58","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618106","GARD:16476","MEDGEN:1648488","UMLS:C4748195"],"synonyms":[{"name":"MENTAL RETARDATION, autosomal dominant 58","type":"exact"},{"name":"MRD58","type":"exact"}],"termid":"MONDO:0020847","terms_by_termid":{"MONDO:0020847":null},"xrefs":{"Monarch":{"xref_id":"0020847"}}}


id: PBO:0080895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTHDF3 divergent transcript","termid":"PBO:0080895"}


id: PBO:0061834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 2","termid":"PBO:0061834"}


id: PBO:0109616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 16, pseudogene","termid":"PBO:0109616"}


id: MONDO:0022412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete albinism immunodeficiency (obsolete MONDO:0022412)","termid":"MONDO:0022412","xrefs":{"Monarch":{"xref_id":"0022412"}}}


id: PBO:0065286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 1B","termid":"PBO:0065286"}


id: GO:0008422
data:
  {"annotated_genes":["SJAG_01171","SJAG_01888","SJAG_01017","SJAG_02192","SJAG_03295","SJAG_02649","SJAG_05001","SJAG_00667","SJAG_02478","SJAG_03646"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86969,107857,115069],"is_not":false,"summary":null,"term":"GO:0008422"},{"annotations":[99643,93530,94606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042973"},{"annotations":[101440,101441,107534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046557"},{"annotations":[101443,101442,87797,94607,107535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004338"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-glucose residues with release of beta-D-glucose.","definition_xrefs":["PMID:12594539","EC:3.2.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02192":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_03295":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"beta-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016983","MetaCyc:3.2.1.21-RXN"],"synonyms":[{"name":"amygdalase activity","type":"narrow"},{"name":"amygdalinase","type":"narrow"},{"name":"arbutinase activity","type":"narrow"},{"name":"aryl-beta-glucosidase activity","type":"related"},{"name":"beta-1,6-glucosidase activity","type":"related"},{"name":"beta-D-glucosidase activity","type":"exact"},{"name":"beta-D-glucoside glucohydrolase activity","type":"related"},{"name":"beta-glucoside glucohydrolase activity","type":"exact"},{"name":"cellobiase activity","type":"narrow"},{"name":"cytokine beta-glucosidase activity","type":"narrow"},{"name":"elaterase activity","type":"narrow"},{"name":"emulsin","type":"related"},{"name":"gentiobiase activity","type":"narrow"},{"name":"gentobiase activity","type":"narrow"},{"name":"limarase activity","type":"narrow"},{"name":"p-nitrophenyl beta-glucosidase activity","type":"narrow"},{"name":"primeverosidase activity","type":"narrow"},{"name":"quercetin 3'-O-beta-D-glucopyranoside hydrolase activity","type":"narrow"},{"name":"quercetin 4'-O-beta-D-glucopyranoside hydrolase activity","type":"narrow"},{"name":"salicilinase activity","type":"narrow"}],"termid":"GO:0008422","terms_by_termid":{"GO:0004338":null,"GO:0008422":null,"GO:0042973":null,"GO:0046557":null}}


id: PBO:0041939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 7","termid":"PBO:0041939"}


id: MONDO:0005129
data:
  {"annotated_genes":["SJAG_04567","SJAG_00404","SJAG_01745","SJAG_00624","SJAG_03581","SJAG_02919","SJAG_00750","SJAG_03815","SJAG_02645","SJAG_01242"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86442,86443,86444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013411"},{"annotations":[86457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011547"},{"annotations":[85841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013859"},{"annotations":[84965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014565"},{"annotations":[84621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014673"},{"annotations":[85519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008925"},{"annotations":[86638,86639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032735"},{"annotations":[84919,84920,84918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011413"}]},"cv_name":"mondo","definition":"Partial or complete opacity of the crystalline lens of one or both eyes that decreases visual acuity and eventually results in blindness. Some cataracts appear in infancy or in childhood, but most develop in older individuals. (Sternberg Diagnostic Surgical Pathology, 3rd ed.)","definition_xrefs":["NCIT:C26713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00624":null,"SJAG_00750":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_02645":null,"SJAG_02919":null,"SJAG_03581":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:366","ICD9:366.9","ICD9:366.44","MEDGEN:39462","MESH:D002386","DOID:83","OMIMPS:116200","SCTID:193570009","UMLS:C0086543","HP:0000518","ICD9:366.8","icd11.foundation:109841337"],"synonyms":[{"name":"cataract","type":"exact"},{"name":"cataract (disease)","type":"exact"},{"name":"opacity of the lens","type":"exact"}],"termid":"MONDO:0005129","terms_by_termid":{"MONDO:0008925":null,"MONDO:0011413":null,"MONDO:0011547":null,"MONDO:0013411":null,"MONDO:0013859":null,"MONDO:0014565":null,"MONDO:0014673":null,"MONDO:0032735":null},"xrefs":{"Monarch":{"xref_id":"0005129"}}}


id: GO:0030196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formamide = H2O + hydrogen cyanide.","definition_xrefs":["EC:4.2.1.66","RHEA:21720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"cyanide hydratase activity","secondary_identifiers":["MetaCyc:CYANIDE-HYDRATASE-RXN","KEGG_REACTION:R01408"],"synonyms":[{"name":"formamide dehydratase activity","type":"related"},{"name":"formamide hydro-lyase (cyanide-forming)","type":"related"},{"name":"formamide hydro-lyase activity","type":"related"}],"termid":"GO:0030196"}


id: PBO:0083476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SSH4","termid":"PBO:0083476"}


id: MONDO:0024286
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  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"}]},"cv_name":"mondo","definition":"A benign neoplasm arising from arteries or veins.","definition_xrefs":["NCIT:C8537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"},{"relation_name":"is_a","term_name":"blood vessel neoplasm","termid":"MONDO:0021080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"benign blood vessel neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:60006","MEDGEN:195779","UMLS:C0685121"],"synonyms":[{"name":"benign blood vessel neoplasm","type":"exact"},{"name":"benign blood vessel tumor","type":"exact"},{"name":"benign blood vessel tumour","type":"exact"}],"termid":"MONDO:0024286","terms_by_termid":{"MONDO:0007154":null},"xrefs":{"Monarch":{"xref_id":"0024286"}}}


id: GO:0090034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of chaperone-mediated protein complex assembly. Chaperone-mediated protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex, mediated by chaperone molecules that do not form part of the finished complex.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"chaperone-mediated protein complex assembly","termid":"GO:0051131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of chaperone-mediated protein complex assembly","termid":"GO:0090034"}


id: PATO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000093 chemical sensitivity (obsolete PATO:0000093)","termid":"PATO:0000093"}


id: GO:0102277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucosaminyl-(1->4)-N-acetyl-D-glucosamine + H2O = D-glucosamine + N-acetyl-D-glucosamine.","definition_xrefs":["RHEA:62164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"2-acetamido-4-O-(2-amino-2-deoxy-beta-D-glucopyranosyl)-2-deoxy-D-glucose exo-beta-D-glucosaminidase activity","secondary_identifiers":["MetaCyc:RXN-12544"],"termid":"GO:0102277"}


id: PATO:0000590
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000590 relative thickness value (obsolete PATO:0000590)","termid":"PATO:0000590"}


id: GO:0009873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the reception of ethylene (ethene, C2H4) by a receptor and ending with modulation of a cellular process, e.g. transcription.","definition_xrefs":["PMID:24012247","GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"},{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to ethylene stimulus","termid":"GO:0071369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ethylene-activated signaling pathway","synonyms":[{"name":"ethene mediated signaling pathway","type":"related"},{"name":"ethene mediated signalling pathway","type":"exact"},{"name":"ethylene mediated signaling pathway","type":"related"},{"name":"ethylene mediated signalling pathway","type":"related"},{"name":"ethylene signal transduction","type":"related"},{"name":"ethylene signaling pathway","type":"related"}],"termid":"GO:0009873"}


id: MONDO:0004438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the breast and is not caused by inherited genetic mutations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sporadic breast cancer","secondary_identifiers":["NCIT:C7566","UMLS:C1336076","DOID:8029","MEDGEN:233463"],"synonyms":[{"name":"sporadic breast cancer","type":"exact"},{"name":"sporadic breast carcinoma","type":"exact"}],"termid":"MONDO:0004438","xrefs":{"Monarch":{"xref_id":"0004438"}}}


id: GO:0051054
data:
  {"annotated_genes":["SJAG_00995","SJAG_03438","SJAG_03300","SJAG_01584","SJAG_04457","SJAG_03957","SJAG_02074","SJAG_03695","SJAG_00364","SJAG_02104","SJAG_00823","SJAG_03720","SJAG_00266","SJAG_03160","SJAG_02214","SJAG_03624","SJAG_00100","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[111486,116717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[111487,102807,116718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[93385,109641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000781"},{"annotations":[106872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[115679,101864,106087,88574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[107817,101867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[95250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"},{"annotations":[101868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[91683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045951"},{"annotations":[105597,115865,88514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120292"},{"annotations":[88575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[96690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving DNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"positively_regulates","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00823":null,"SJAG_00995":null,"SJAG_01584":null,"SJAG_02074":null,"SJAG_02104":null,"SJAG_02214":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03300":null,"SJAG_03438":null,"SJAG_03624":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03957":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA metabolic process","type":"narrow"},{"name":"positive regulation of DNA metabolism","type":"exact"},{"name":"stimulation of DNA metabolic process","type":"narrow"},{"name":"up regulation of DNA metabolic process","type":"exact"},{"name":"up-regulation of DNA metabolic process","type":"exact"},{"name":"upregulation of DNA metabolic process","type":"exact"}],"termid":"GO:0051054","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0032215":null,"GO:0045739":null,"GO:0045951":null,"GO:0090297":null,"GO:0120292":null,"GO:1903465":null,"GO:1903468":null,"GO:1904514":null,"GO:1905263":null,"GO:2000781":null,"GO:2001034":null}}


id: MONDO:1011082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, pig","secondary_identifiers":["OMIA:001033-9823"],"termid":"MONDO:1011082","xrefs":{"Monarch":{"xref_id":"1011082"}}}


id: PBO:0067163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 216, pseudogene","termid":"PBO:0067163"}


id: MONDO:0100056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder in which anaphylaxis occurs in association with physical activity.","definition_xrefs":["GARD:0006392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphylaxis","termid":"MONDO:0100053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"exercise-induced anaphylaxis","secondary_identifiers":["icd11.foundation:1069179856","MEDGEN:576137","UMLS:C0344183"],"synonyms":[{"name":"EIAn","type":"exact"}],"termid":"MONDO:0100056","xrefs":{"Monarch":{"xref_id":"0100056"}}}


id: MOD:00161
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-glucosylated L-cysteine.","definition_xrefs":["Unimod:41#C","PubMed:5286858","RESID:AA0152","PubMed:1145128","PubMed:15279557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycosylated residue","termid":"MOD:00426"},{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00764","MOD:00905"],"is_obsolete":false,"name":"S-glucosyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-[(beta-D-glucopyranosyl)sulfanyl]propanoic acid","type":"exact"},{"name":"CARBOHYD S-linked (Glc) cysteine","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"S-(beta-D-glucopyranosyl)cysteine","type":"exact"},{"name":"S-glucosyl-L-cysteine","type":"exact"},{"name":"S-glycosyl-cysteine","type":"exact"},{"name":"SGlcCys","type":"exact"}],"termid":"MOD:00161"}


id: GO:0032332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chondrocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation","termid":"GO:0032330"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of cartilage development","termid":"GO:0061036"},{"relation_name":"positively_regulates","term_name":"chondrocyte differentiation","termid":"GO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chondrocyte differentiation","synonyms":[{"name":"activation of chondrocyte differentiation","type":"narrow"},{"name":"stimulation of chondrocyte differentiation","type":"narrow"},{"name":"up regulation of chondrocyte differentiation","type":"exact"},{"name":"up-regulation of chondrocyte differentiation","type":"exact"},{"name":"upregulation of chondrocyte differentiation","type":"exact"}],"termid":"GO:0032332"}


id: MONDO:1011224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectropion that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectropion, non-human animal","termid":"MONDO:1010322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectropion, dog","secondary_identifiers":["OMIA:000325-9615"],"termid":"MONDO:1011224","xrefs":{"Monarch":{"xref_id":"1011224"}}}


id: PATO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color that falls about midway between red and blue in hue.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purple","termid":"PATO:0000951"}


id: PBO:0034419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulation_by_(obsolete_requires_regulation_by)","termid":"PBO:0034419"}


id: PBO:0040069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin 3","termid":"PBO:0040069"}


id: GO:0005682
data:
  {"annotated_genes":["SJAG_05240","SJAG_02295","SJAG_00414","SJAG_03070","SJAG_04222","SJAG_00147","SJAG_02455","SJAG_02469","SJAG_04230","SJAG_01870","SJAG_02304","SJAG_03469","SJAG_02843","SJAG_04497","SJAG_03954","SJAG_01327","SJAG_02279","SJAG_05235","SJAG_00278","SJAG_01547","SJAG_03460","SJAG_01819","SJAG_01301"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94429,94682,95106,95327,96904,97513,100123,102035,102195,105346,105813,106014,107996,109525,110079,111694,112329,113801,114378,114651,115312,115850,117268],"is_not":false,"summary":null,"term":"GO:0005682"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U5, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U5 snRNP, most of which remain associated with the U5 snRNA both while the U5 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:mah","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00278":null,"SJAG_00414":null,"SJAG_01301":null,"SJAG_01327":null,"SJAG_01547":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03954":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04497":null,"SJAG_05235":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U5 snRNP","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snRNP U5","type":"exact"}],"termid":"GO:0005682","terms_by_termid":{"GO:0005682":null}}


id: GO:1902805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle transport.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000058","PMID:23527112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle transport","synonyms":[{"name":"activation of synaptic vesicle fission","type":"related"},{"name":"activation of synaptic vesicle fusion","type":"related"},{"name":"activation of synaptic vesicle transport","type":"narrow"},{"name":"positive regulation of synaptic vesicle fission","type":"related"},{"name":"positive regulation of synaptic vesicle fusion","type":"related"},{"name":"up regulation of synaptic vesicle fission","type":"related"},{"name":"up regulation of synaptic vesicle fusion","type":"related"},{"name":"up regulation of synaptic vesicle transport","type":"exact"},{"name":"up-regulation of synaptic vesicle fission","type":"related"},{"name":"up-regulation of synaptic vesicle fusion","type":"related"},{"name":"up-regulation of synaptic vesicle transport","type":"exact"},{"name":"upregulation of synaptic vesicle fission","type":"related"},{"name":"upregulation of synaptic vesicle fusion","type":"related"},{"name":"upregulation of synaptic vesicle transport","type":"exact"}],"termid":"GO:1902805"}


id: GO:0052601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: limonene + NAD(P)H + H+ + O2 = NAD(P)+ + H2O + limonene-1,2-epoxide. Can use either (4S)-limonene or (4R)-limonene as substrate. NADPH can act instead of NADH, although more slowly.","definition_xrefs":["EC:1.14.13.107","PMID:8820855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"},{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"limonene 1,2-monooxygenase activity","synonyms":[{"name":"(-)-limonene 1,2-monooxygenase activity","type":"related"},{"name":"(-)-limonene,NAD(P)H:oxygen oxidoreductase activity","type":"related"},{"name":"(S)-limonene 1,2-monooxygenase activity","type":"narrow"},{"name":"(S)-limonene,NAD(P)H:oxygen oxidoreductase activity","type":"exact"}],"termid":"GO:0052601"}


id: PBO:0047793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box F2","termid":"PBO:0047793"}


id: PBO:0045980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS homologous factor","termid":"PBO:0045980"}


id: MONDO:0013641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Warburg micro syndrome in which the cause of the disease is a mutation in the RAB3GAP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Warburg micro syndrome","termid":"MONDO:0016649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"Warburg micro syndrome 2","secondary_identifiers":["OMIM:614225","GARD:15780","MEDGEN:481844","UMLS:C3280214","DOID:0110717"],"synonyms":[{"name":"RAB3GAP2 Warburg micro syndrome","type":"exact"},{"name":"WARBM2","type":"exact"},{"name":"WARBURG micro syndrome 2","type":"related"},{"name":"Warburg micro syndrome 2","type":"exact"},{"name":"Warburg micro syndrome caused by mutation in RAB3GAP2","type":"exact"},{"name":"Warburg micro syndrome type 2","type":"exact"},{"name":"micro syndrome 2","type":"exact"}],"termid":"MONDO:0013641","xrefs":{"Monarch":{"xref_id":"0013641"}}}


id: GO:0045735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Functions in the storage of nutritious substrates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"nutrient reservoir activity","synonyms":[{"name":"storage protein","type":"related"},{"name":"storage protein of fat body","type":"related"},{"name":"yolk protein","type":"related"}],"termid":"GO:0045735"}


id: GO:0001964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action or movement due to the application of a sudden unexpected stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"neuromuscular process","termid":"GO:0050905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"startle response","secondary_identifiers":["Wikipedia:Startle_reaction"],"termid":"GO:0001964"}


id: PBO:0000804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15a (predicted)","termid":"PBO:0000804"}


id: PBO:0027448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_bleomycin","termid":"PBO:0027448"}


id: PBO:0076194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 3","termid":"PBO:0076194"}


id: MONDO:0014296
data:
  {"annotated_genes":["SJAG_04938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85169],"is_not":false,"summary":null,"term":"MONDO:0014296"}]},"cv_name":"mondo","definition":"Any Warburg micro syndrome in which the cause of the disease is a mutation in the TBC1D20 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Warburg micro syndrome","termid":"MONDO:0016649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04938":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Warburg micro syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:816595","GARD:15998","DOID:0110719","OMIM:615663","UMLS:C3810265"],"synonyms":[{"name":"TBC1D20 Warburg micro syndrome","type":"exact"},{"name":"WARBM4","type":"exact"},{"name":"WARBURG micro syndrome 4","type":"related"},{"name":"Warburg micro syndrome 4","type":"exact"},{"name":"Warburg micro syndrome caused by mutation in TBC1D20","type":"exact"},{"name":"Warburg micro syndrome type 4","type":"exact"},{"name":"micro syndrome 4","type":"exact"}],"termid":"MONDO:0014296","terms_by_termid":{"MONDO:0014296":null},"xrefs":{"Monarch":{"xref_id":"0014296"}}}


id: PBO:0084002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerol kinase; converts glycerol to glycerol-3-phosphate; glucose repression of expression is mediated by Adr1p and Ino2p-Ino4p; derepression of expression on non-fermentable carbon sources is mediated by Opi1p and Rsf1p","termid":"PBO:0084002"}


id: GO:0102376
data:
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id: FYPO:0003415
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id: PBO:0080198
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id: MONDO:0100112
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id: PBO:0028222
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id: PATO:0000062
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id: PBO:0108923
data:
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id: PBO:0043971
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id: PBO:0001985
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id: GO:0098772
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id: GO:0015476
data:
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id: GO:0071807
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id: PATO:0000689
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id: MONDO:0013261
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id: PBO:0030714
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id: PBO:0049947
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id: MONDO:0002520
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id: PBO:0072452
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id: PBO:0092038
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id: PBO:0066951
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id: GO:0046325
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id: GO:0003994
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id: PBO:0047116
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id: SO:0001411
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id: PBO:0069739
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id: PBO:0090003
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific serine/threonine rich protein","termid":"PBO:0090003"}


id: MOD:01174
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(15-deoxy-Delta12,14-prostaglandin J2-9-yl)-L-cysteine.","definition_xrefs":["RESID:AA0426","PubMed:11466314","PubMed:12684535","ChEBI:27485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"S-(15-deoxy-Delta12,14-prostaglandin J2-9-yl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(5Z,9Xi,12E,14Z)-1-hydroxy-1,11-oxoprosta-5,12,14-trien-9-yl]sulfanyl)propanoic acid","type":"exact"},{"name":"(5Z,9Xi,12E,14Z)-9-([(2R)-2-amino-3-carboxyethyl]sulfanyl)-11-oxoprosta-5,12,14-trien-1-oic acid","type":"exact"},{"name":"LIPID S-(15-deoxy-Delta12,14-prostaglandin J2-9-yl)cysteine","type":"exact"},{"name":"PG-J2Cys","type":"exact"},{"name":"S-(15-deoxy-Delta12,14-prostaglandin J2-9-yl)-L-cysteine","type":"exact"}],"termid":"MOD:01174"}


id: PR:O59745
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose 6-phosphate receptor-like protein C530.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.09c","synonyms":[{"name":"Spom972h-mrl1","type":"exact"}],"termid":"PR:O59745"}


id: GO:0032598
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id: PBO:0091187
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 6","termid":"PBO:0091187"}


id: MONDO:0021013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of trichothiodystrophy caused by mutation(s) in the MPLKIP gene, encoding M-phase-specific PLK1-interacting protein.","definition_xrefs":["NCIT:C146899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 4, nonphotosensitive","secondary_identifiers":["OMIM:234050","SCTID:403796005","DOID:0050528","MEDGEN:272036","ICD9:783.43","ICD9:704.8","Orphanet:75790","UMLS:C1313961","GARD:5271"],"synonyms":[{"name":"Amish brittle hair brain syndrome","type":"related"},{"name":"BIDS syndrome","type":"related"},{"name":"MPLKIP nonphotosensitive trichothiodystrophy","type":"exact"},{"name":"Pollitt syndrome","type":"exact"},{"name":"TTD4","type":"exact"},{"name":"hair-brain syndrome","type":"related"},{"name":"nonphotosensitive trichothiodystrophy","type":"related"},{"name":"nonphotosensitive trichothiodystrophy caused by mutation in MPLKIP","type":"exact"},{"name":"trichothiodystrophy 4, nonphotosensitive","type":"exact"},{"name":"trichothiodystrophy, nonphotosensitive 1","type":"related"},{"name":"trichothiodystrophy-neurocutaneous syndrome","type":"related"}],"termid":"MONDO:0021013","xrefs":{"Monarch":{"xref_id":"0021013"}}}


id: PBO:0070010
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1307, pseudogene","termid":"PBO:0070010"}


id: PBO:0047648
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 1","termid":"PBO:0047648"}


id: PBO:0079543
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 5","termid":"PBO:0079543"}


id: GO:0042938
data:
  {"annotated_genes":["SJAG_01983","SJAG_02139","SJAG_05182"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[117781,117780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035442"}]},"cv_name":"biological_process","definition":"The directed movement of a dipeptide, a combination of two amino acids by means of a peptide (-CO-NH-) link, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01983":null,"SJAG_02139":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"dipeptide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042938","terms_by_termid":{"GO:0035442":null,"GO:0140206":null}}


id: GO:1990972
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Glycoprotein complex of the C1q/TNF superfamily involved in cell adhesion. A homotrimer that will combine to form supramolecular Multimerin structures.","definition_xrefs":["PMID:9454761","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"multimerin complex","synonyms":[{"name":"EMILIN-3 complex","type":"narrow"},{"name":"EMILIN-4 complex","type":"narrow"},{"name":"Elastic microfibrillar interface 3 complex","type":"narrow"},{"name":"Elastic microfibrillar interface 4 complex","type":"narrow"},{"name":"Multimerin-1 complex","type":"narrow"},{"name":"Multimerin-2 complex","type":"narrow"},{"name":"Platelet glycoprotein Ia* complex","type":"narrow"},{"name":"p155 complex","type":"narrow"}],"termid":"GO:1990972"}


id: MONDO:0008931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cenani-Lenz syndrome (CLS) is a congenital malformation syndrome that associates a complex syndactyly of the hands with malformations of the forearm bones and similar manifestations in the lower limbs.","definition_xrefs":["Orphanet:3258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cenani-Lenz syndactyly syndrome","secondary_identifiers":["GARD:5084","MEDGEN:395226","OMIM:212780","SCTID:720633009","MESH:C538150","UMLS:C1859309","DOID:0090015"],"synonyms":[{"name":"CLSS","type":"related"},{"name":"Cenani syndactylism","type":"related"},{"name":"Cenani syndactyly","type":"exact"},{"name":"Cenani-Lenz syndactyly","type":"exact"},{"name":"Cenani-Lenz syndactyly syndrome","type":"exact"},{"name":"Cenani-Lenz syndrome","type":"related"},{"name":"Cenani-Lenz type syndactyly","type":"related"},{"name":"syndactyly Cenani Lenz type","type":"related"},{"name":"syndactyly type 7","type":"exact"},{"name":"syndactyly, type 7","type":"related"}],"termid":"MONDO:0008931","xrefs":{"Monarch":{"xref_id":"0008931"}}}


id: PBO:0039379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine monophosphate deaminase 2","termid":"PBO:0039379"}


id: PBO:0047832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box P3","termid":"PBO:0047832"}


id: MONDO:0007752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperheparinemia","secondary_identifiers":["ICD9:286.5","UMLS:C3203346","MESH:C562723","MEDGEN:469019","OMIM:144050","SCTID:79674009"],"synonyms":[{"name":"hyperheparinemia","type":"exact"}],"termid":"MONDO:0007752","xrefs":{"Monarch":{"xref_id":"0007752"}}}


id: MONDO:0009605
data:
  {"annotated_genes":["SJAG_03929","SJAG_04217"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85067,85068],"is_not":false,"summary":null,"term":"MONDO:0009605"}]},"cv_name":"mondo","definition":"Any methemoglobinemia in which the cause of the disease is a mutation in the CYB5A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary methemoglobinemia","termid":"MONDO:0018963"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03929":null,"SJAG_04217":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"methemoglobinemia type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:925090","OMIM:250790","DOID:0112316","MESH:C567102","UMLS:C4285231","GARD:15196"],"synonyms":[{"name":"CYB5A methemoglobinemia","type":"exact"},{"name":"METAG","type":"related"},{"name":"isolated 17,20-lyase deficiency, Pure","type":"related"},{"name":"methemoglobinemia and ambiguous genitalia","type":"related"},{"name":"methemoglobinemia caused by mutation in CYB5A","type":"exact"},{"name":"methemoglobinemia due to deficiency of cytochrome B5","type":"related"},{"name":"methemoglobinemia due to deficiency of cytochrome B5, formerly","type":"related"},{"name":"methemoglobinemia type 4","type":"exact"},{"name":"methemoglobinemia type IV","type":"related"},{"name":"methemoglobinemia type IV, formerly","type":"related"}],"termid":"MONDO:0009605","terms_by_termid":{"MONDO:0009605":null},"xrefs":{"Monarch":{"xref_id":"0009605"}}}


id: GO:0043174
data:
  {"annotated_genes":["SJAG_05029","SJAG_03881","SJAG_06634","SJAG_01781","SJAG_01070","SJAG_03096","SJAG_02179","SJAG_00134","SJAG_04264","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98091,98092],"is_not":false,"summary":null,"term":"GO:0043174"},{"annotations":[116282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[107962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[115283,89288,93040,93258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[97236,113257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"}]},"cv_name":"biological_process","definition":"Any process which produces a nucleotide, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose (a deoxyribonucleotide), from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"cellular metabolic compound salvage","termid":"GO:0043094"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_01070":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_05029":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleoside salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043174","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0043097":null,"GO:0043174":null}}


id: PBO:0086252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that negatively regulates the SCF E3-ubiquitin ligase; regulates by interacting with and preventing neddyation of the cullin subunit, Cdc53p; longevity determinant that is preferentially expressed in young cells; similar to mammalian Cand1","termid":"PBO:0086252"}


id: PBO:0090852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic acid transmembrane transporter Tna1","termid":"PBO:0090852"}


id: PBO:0087561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex; role in proteolysis of spindle positioning protein Kar9, DNA repair proteins Rad52p and Rad57p; stimulated by SUMO-modified substrates; contains a C-terminal RING domain; forms nuclear foci upon DNA replication stress; required for maintenance of genome integrity like human ortholog RNF","termid":"PBO:0087561"}


id: PBO:0004287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor complex subunit Rep1","termid":"PBO:0004287"}


id: GO:0070784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which cells remain attached after division and form thread-like filaments that may penetrate into a solid growth medium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"}


id: PBO:0062485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 1 pseudogene","termid":"PBO:0062485"}


id: FYPO:0006486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006486"}


id: GO:1904583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polyamine macromolecule stimulus.","definition_xrefs":["PMID:20805360","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to polyamine macromolecule","synonyms":[{"name":"response to polyamine","type":"exact"},{"name":"response to polyamines","type":"exact"}],"termid":"GO:1904583"}


id: PBO:0080192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox","termid":"PBO:0080192"}


id: MONDO:0010325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Stocco dos Santos type","secondary_identifiers":["MEDGEN:335202","GARD:1133","OMIM:300434","UMLS:C1845530","Orphanet:85288","DOID:0112126","SCTID:718910006","MESH:C537495"],"synonyms":[{"name":"SDSX","type":"related"},{"name":"Sdsx","type":"related"},{"name":"Stocco DOS Santos X-linked intellectual disability syndrome","type":"related"},{"name":"Stocco DOS Santos X-linked mental retardation syndrome","type":"related"},{"name":"Stocco dos Santos syndrome","type":"related"},{"name":"intellectual developmental disorder, X-linked syndromic, Stocco dos Santos type","type":"exact"},{"name":"intellectual disability, Stocco dos Santos type","type":"related"},{"name":"intellectual disability, X-linked, Stocco Dos Santos type","type":"related"},{"name":"mental retardation, Stocco dos Santos type","type":"related"},{"name":"mental retardation, X-linked, Stocco Dos Santos type","type":"related"}],"termid":"MONDO:0010325","xrefs":{"Monarch":{"xref_id":"0010325"}}}


id: MOD:01723
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01723"}


id: GO:2000902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellooligosaccharide metabolic process","synonyms":[{"name":"cellooligosaccharide metabolism","type":"exact"}],"termid":"GO:2000902"}


id: GO:0034067
data:
  {"annotated_genes":["SJAG_01516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98221],"is_not":false,"summary":null,"term":"GO:0034067"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to Golgi apparatus","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000042","GO:0072600"],"synonyms":[{"name":"establishment of protein localisation to Golgi","type":"narrow"},{"name":"establishment of protein localization in Golgi","type":"narrow"},{"name":"establishment of protein localization to Golgi","type":"narrow"},{"name":"establishment of protein localization to Golgi apparatus","type":"narrow"},{"name":"protein localisation in Golgi apparatus","type":"exact"},{"name":"protein localization in Golgi apparatus","type":"exact"},{"name":"protein targeting to Golgi","type":"related"},{"name":"protein-Golgi targeting","type":"related"}],"termid":"GO:0034067","terms_by_termid":{"GO:0034067":null}}


id: PBO:0085104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein that negatively regulates pseudohyphal differentiation; plays a regulatory role in the cyclic AMP (cAMP)-dependent protein kinase (PKA) signal transduction pathway; relocalizes to the cytosol in response to hypoxia; SOK2 has a paralog, PHD1, that arose from the whole genome duplication","termid":"PBO:0085104"}


id: PBO:0013030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snu66","termid":"PBO:0013030"}


id: PBO:0068798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 35, pseudogene","termid":"PBO:0068798"}


id: PBO:0084511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of an oxysterol-binding protein family; this family has seven members in S. cerevisiae; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; contains FFAT motif; interacts with ER anchor Scs2p at patches at the plasma membrane; regulated by sterol binding","termid":"PBO:0084511"}


id: GO:0070819
data:
  {"annotated_genes":["SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91853],"is_not":false,"summary":null,"term":"GO:0070819"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protoporphyrinogen IX + menaquinone = protoporphyrin IX + reduced menaquinone.","definition_xrefs":["GOC:mah","PMID:19583219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"},{"relation_name":"is_a","term_name":"protoporphyrinogen oxidase activity","termid":"GO:0070818"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"menaquinone-dependent protoporphyrinogen oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protoporphyrinogen-IX:menaquinone oxidoreductase activity","type":"exact"}],"termid":"GO:0070819","terms_by_termid":{"GO:0070819":null}}


id: SO:0002149
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 15th residue (a lysine), from the start of the H2AZ histone protein is acetylated.","definition_xrefs":["PMID:24316985","PMID:27087541","PMID:19385636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2AZ_acetylation_site","termid":"SO:0002144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AZK15_acetylation_site","synonyms":[{"name":"H2A.ZK15ac","type":"exact"},{"name":"H2AZK15 acetylation site","type":"exact"},{"name":"H2AZK15ac","type":"exact"}],"termid":"SO:0002149"}


id: PBO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps52 (predicted)","termid":"PBO:0004191"}


id: PBO:0039661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 2 subunit mu 1","termid":"PBO:0039661"}


id: PBO:0004186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZnF type","termid":"PBO:0004186"}


id: PR:Q10442
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet801 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C12B10.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.09","synonyms":[{"name":"Spom972h-pet801","type":"exact"}],"termid":"PR:Q10442"}


id: MONDO:0037149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"HSD10 mitochondrial disease","termid":"MONDO:0010327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"HSD10 disease, atypical type","secondary_identifiers":["Orphanet:85295","MEDGEN:1843277","GARD:16749","UMLS:C5680206"],"synonyms":[{"name":"HSD10 deficiency, atypical type","type":"exact"},{"name":"Syndromic X-linked intellectual disability type 10","type":"exact"},{"name":"X-linked intellectual disability-choreoathetosis-abnormal behavior syndrome","type":"broad"},{"name":"X-linked intellectual disability-choreoathetosis-abnormal behaviour syndrome","type":"broad"}],"termid":"MONDO:0037149","xrefs":{"Monarch":{"xref_id":"0037149"}}}


id: GO:0002752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a cell surface pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["PMID:15199967","GOC:ar","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response activating cell surface receptor signaling pathway","termid":"GO:0002220"},{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell surface pattern recognition receptor signaling pathway","synonyms":[{"name":"cell surface PAMP receptor signaling pathway","type":"exact"},{"name":"cell surface PRR signaling pathway","type":"exact"},{"name":"cell surface pathogen receptor signaling pathway","type":"exact"},{"name":"cell surface pattern recognition receptor signalling pathway","type":"exact"}],"termid":"GO:0002752"}


id: PBO:0079973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 11","termid":"PBO:0079973"}


id: PBO:0062132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily E member 1","termid":"PBO:0062132"}


id: GO:0021561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the facial nerve over time, from its formation to the mature structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives off nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nerve development","synonyms":[{"name":"CN VII development","type":"related"},{"name":"cranial nerve 7 development","type":"exact"},{"name":"cranial nerve VII development","type":"exact"}],"termid":"GO:0021561"}


id: MONDO:0016983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bartter syndrome with hypocalcemia is a type of Bartter syndrome characterized by hypocalcemia, hypomagnesemia and hypoparathyroidism along with features of Henle's loop dysfunction (polyuria, hypokalemic alkalosis, increased levels of plasma renin and aldosterone, low blood pressure and vascular resistance to angiotensin II). Bartter syndrome with hypocalcemia is a very rare manifestation of autosomal dominant hypocalcemia (ADH)","definition_xrefs":["Orphanet:263417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome","termid":"MONDO:0015231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter syndrome with hypocalcemia","secondary_identifiers":["UMLS:C3715128","MEDGEN:811594"],"synonyms":[{"name":"Bartter syndrome type 5","type":"exact"},{"name":"Bartter syndrome type V","type":"exact"}],"termid":"MONDO:0016983","xrefs":{"Monarch":{"xref_id":"0016983"}}}


id: PBO:0077557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM263 divergent transcript","termid":"PBO:0077557"}


id: PBO:0050130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 40","termid":"PBO:0050130"}


id: PBO:0083098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase; DNA recombination/repair translocase, supercoils DNA, promotes DNA strand opening; stimulates strand exchange by modifying dsDNA topology; involved in recombinational repair of DNA double-strand breaks (DSBs) during mitosis, meiosis; implicated in cell divisions in telomerase-negative strains through adaptation to DNA damage, which allows bypass of cell cycle arrest and contributes senescence-specific genome instability; phosphorylated in response to DNA damage","termid":"PBO:0083098"}


id: PBO:0036110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_actin_cable_assembly","termid":"PBO:0036110"}


id: GO:0010883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid storage","synonyms":[{"name":"regulation of lipid sequestration","type":"narrow"}],"termid":"GO:0010883"}


id: GO:0021630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory nerve to attain its fully functional state. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve maturation","synonyms":[{"name":"CN I maturation","type":"exact"}],"termid":"GO:0021630"}


id: GO:0018241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O5 atom of peptidyl-hydroxylysine, forming O5-glycosyl-L-hydroxylysine; the most common form is galactosyl hydroxylysine.","definition_xrefs":["RESID:AA0153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein O-linked glycosylation via hydroxylysine","synonyms":[{"name":"protein amino acid O-linked glycosylation via hydroxylysine","type":"exact"}],"termid":"GO:0018241"}


id: PBO:0029308
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spheroid_cell_during_G0","termid":"PBO:0029308"}


id: MONDO:0002575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete prostate rhabdomyosarcoma (obsolete MONDO:0002575)","termid":"MONDO:0002575","xrefs":{"Monarch":{"xref_id":"0002575"}}}


id: PATO:0001463
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a cell's plasma membrane by virtue of a brief fluctuation in the bearer's potential caused by the rapid opening and closing of voltage-gated ion channels.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Action_potential"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electric potential","termid":"PATO:0001464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"action potential","termid":"PATO:0001463"}


id: PBO:0057743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1538","termid":"PBO:0057743"}


id: MONDO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucopolysaccharidosis type 4 (obsolete MONDO:0001587)","termid":"MONDO:0001587","xrefs":{"Monarch":{"xref_id":"0001587"}}}


id: GO:0019607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylethylamine, an amine with pharmacological properties similar to those of amphetamine, occurs naturally as a neurotransmitter in the brain, and is present in chocolate and oil of bitter almonds.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine catabolic process","termid":"GO:0042402"},{"relation_name":"is_a","term_name":"phenylethylamine metabolic process","termid":"GO:0042443"},{"relation_name":"is_a","term_name":"primary amino compound catabolic process","termid":"GO:1901161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylethylamine catabolic process","secondary_identifiers":["MetaCyc:2PHENDEG-PWY"],"synonyms":[{"name":"phenylethylamine breakdown","type":"exact"},{"name":"phenylethylamine catabolism","type":"exact"},{"name":"phenylethylamine degradation","type":"exact"}],"termid":"GO:0019607"}


id: GO:0030636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of derivatives of acetic acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete acetate derivative biosynthetic process (obsolete GO:0030636)","synonyms":[{"name":"acetate derivative anabolism","type":"exact"},{"name":"acetate derivative biosynthesis","type":"exact"},{"name":"acetate derivative biosynthetic process","type":"exact"},{"name":"acetate derivative formation","type":"exact"},{"name":"acetate derivative synthesis","type":"exact"}],"termid":"GO:0030636"}


id: FYECO:0000056
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 3'5'-cyclic AMP was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["CHEBI:17489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 3,5-cyclic AMP","termid":"FYECO:0000056"}


id: GO:0047688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate = L-alanine + CO2.","definition_xrefs":["EC:4.1.1.12","MetaCyc:ASPARTATE-4-DECARBOXYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"aspartate 4-decarboxylase activity","secondary_identifiers":["RHEA:12621"],"synonyms":[{"name":"L-aspartate 4-carboxy-lyase (L-alanine-forming)","type":"related"},{"name":"L-aspartate 4-carboxy-lyase activity","type":"related"},{"name":"L-aspartate beta-decarboxylase activity","type":"related"},{"name":"L-cysteine sulfinate acid desulfinase activity","type":"related"},{"name":"aminomalonic decarboxylase activity","type":"related"},{"name":"aspartate beta-decarboxylase activity","type":"related"},{"name":"aspartate omega-decarboxylase activity","type":"related"},{"name":"aspartic beta-decarboxylase activity","type":"related"},{"name":"aspartic omega-decarboxylase activity","type":"related"},{"name":"cysteine sulfinic desulfinase activity","type":"related"},{"name":"desulfinase activity","type":"related"}],"termid":"GO:0047688"}


id: PBO:0018169
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latrunculin sensitive gamma subunit","termid":"PBO:0018169"}


id: PBO:0069451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 716, pseudogene","termid":"PBO:0069451"}


id: MONDO:0025505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly contagious parvovirus infection in mink, caused by mink enteritis virus or the closely related feline panleukopenia virus or canine parvovirus. Transmission usually occurs by the fecal/oral route.","definition_xrefs":["MESH:D053489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parvoviridae infectious disease, non-human animal","termid":"MONDO:0700206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mink viral enteritis","synonyms":[{"name":"enteritides, mink viral","type":"exact"},{"name":"enteritis, infectious, of mink","type":"exact"},{"name":"enteritis, mink viral","type":"exact"},{"name":"mink viral enteritides","type":"exact"},{"name":"viral enteritides, mink","type":"exact"},{"name":"viral enteritis, mink","type":"exact"}],"termid":"MONDO:0025505","xrefs":{"Monarch":{"xref_id":"0025505"}}}


id: GO:0009926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin in the stem from tip to base along the vector of gravity or basipetally.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transport","termid":"GO:0060918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"auxin polar transport","termid":"GO:0009926"}


id: PR:Q9P7J1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional protein swt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.15","synonyms":[{"name":"Spom972h-swt1","type":"exact"}],"termid":"PR:Q9P7J1"}


id: MONDO:0011654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, microcephaly, growth retardation, joint contractures, and facial dysmorphism","secondary_identifiers":["MEDGEN:342889","UMLS:C1853480","MESH:C565246","OMIM:606242"],"synonyms":[{"name":"Kondoh syndrome","type":"related"},{"name":"intellectual disability, microcephaly, growth retardation, JOINT contractures, and facial dysmorphism","type":"related"},{"name":"mental retardation, microcephaly, growth retardation, JOINT contractures, and facial dysmorphism","type":"related"}],"termid":"MONDO:0011654","xrefs":{"Monarch":{"xref_id":"0011654"}}}


id: GO:0051543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of elastin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"elastin biosynthetic process","termid":"GO:0051542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of elastin biosynthetic process","termid":"GO:0051543"}


id: MONDO:0007379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meesmann corneal dystrophy (MECD) is a rare form of superficial corneal dystrophy characterized by distinct tiny bubble-like, round-to-oval punctate bilateral opacities in the central corneal epithelium, and to a lesser extent in the peripheral cornea, with little impact on vision.","definition_xrefs":["Orphanet:98954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial and subepithelial corneal dystrophy","termid":"MONDO:0000763"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Meesmann corneal dystrophy","secondary_identifiers":["DOID:0060451","MEDGEN:83283","NCIT:C84795","OMIMPS:122100","SCTID:1674008","MESH:D053559","GARD:9688","ICD9:371.51","UMLS:C0339277"],"synonyms":[{"name":"MECD","type":"exact"},{"name":"Meesman dystrophy","type":"related"},{"name":"Meesmann corneal dystrophy","type":"exact"},{"name":"Meesmann corneal epithelial dystrophy","type":"related"},{"name":"corneal dystrophy, Meesmann","type":"related"},{"name":"corneal dystrophy, Meesmann epithelial","type":"related"},{"name":"corneal dystrophy, juvenile epithelial of Meesmann","type":"related"},{"name":"corneal dystrophy, juvenile epithelial, of Meesmann","type":"related"},{"name":"juvenile epithelial of Meesmann corneal dystrophy","type":"exact"},{"name":"juvenile hereditary epithelial dystrophy","type":"exact"},{"name":"juvenile hereditary epithelial dystrophy of Meesmann","type":"exact"},{"name":"stocker-Holt dystrophy","type":"exact"}],"termid":"MONDO:0007379","xrefs":{"Monarch":{"xref_id":"0007379"}}}


id: PBO:0072730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 1","termid":"PBO:0072730"}


id: GO:0045229
data:
  {"annotated_genes":["SJAG_03444","SJAG_02733","SJAG_01321","SJAG_02845","SJAG_03013","SJAG_01171","SJAG_04595","SJAG_01017","SJAG_01181","SJAG_03295","SJAG_01888","SJAG_02718","SJAG_02649","SJAG_03646","SJAG_00163","SJAG_02590","SJAG_00974","SJAG_03631","SJAG_02192","SJAG_01835","SJAG_05001","SJAG_01290","SJAG_01453","SJAG_04462","SJAG_01227","SJAG_02446","SJAG_04868","SJAG_00218","SJAG_00667","SJAG_04073","SJAG_04620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88219,89760,91278,87726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[88607,107532,101436,101437,99639,93527,87794,110768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"},{"annotations":[90111,107242,93907,94605,93723,87795,98163,101945,102131,109508,79788,88847,112800,107855,86965,87585,91095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031505"},{"annotations":[104815,87112,110431],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of external structures that lie outside the plasma membrane and surround the entire cell.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00218":null,"SJAG_00667":null,"SJAG_00974":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01181":null,"SJAG_01227":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_01888":null,"SJAG_02192":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02649":null,"SJAG_02718":null,"SJAG_02733":null,"SJAG_02845":null,"SJAG_03013":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03631":null,"SJAG_03646":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04595":null,"SJAG_04620":null,"SJAG_04868":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"external encapsulating structure organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"external encapsulating structure organisation","type":"exact"},{"name":"external encapsulating structure organization and biogenesis","type":"exact"}],"termid":"GO:0045229","terms_by_termid":{"GO:0030476":null,"GO:0031505":null,"GO:0060237":null,"GO:1904541":null}}


id: PBO:0052401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 2","termid":"PBO:0052401"}


id: PBO:0052944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated like protein 29-1","termid":"PBO:0052944"}


id: PBO:0029378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_G0","termid":"PBO:0029378"}


id: PBO:0036087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0036087"}


id: MONDO:0018832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTRA1-related autosomal dominant cerebral small vessel disease","secondary_identifiers":["UMLS:C5568568","GARD:17877","MEDGEN:1799991","Orphanet:482077"],"synonyms":[{"name":"HTRA1-related autosomal dominant cerebral angiopathy","type":"exact"}],"termid":"MONDO:0018832","xrefs":{"Monarch":{"xref_id":"0018832"}}}


id: PBO:0047821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O1B (pseudogene)","termid":"PBO:0047821"}


id: GO:0141096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription repressor activity regulated by binding to a ligand and that inhibits the transcription of specific genes and gene sets.","definition_xrefs":["PMID:21555518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"},{"relation_name":"is_a","term_name":"ligand-modulated transcription factor activity","termid":"GO:0098531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0001217"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0003700","GO:0003674","GO:0001217","GO:0140110"],"is_obsolete":false,"name":"ligand-modulated transcription repressor activity","synonyms":[{"name":"ligand-activated transcription repressor activity","type":"narrow"}],"termid":"GO:0141096"}


id: GO:0031127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->2) linkage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"alpha-(1,2)-fucosyltransferase activity","synonyms":[{"name":"alpha-(1->2)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,2-fucosyltransferase activity","type":"exact"}],"termid":"GO:0031127"}


id: FYPO:0005266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sodium dodecyl sulfate (SDS) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to sodium dodecyl sulfate","synonyms":[{"name":"resistance to sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to sodium dodecyl sulphate","type":"exact"},{"name":"resistant to SDS","type":"exact"},{"name":"resistant to sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0005266"}


id: GO:0047971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-guanidinobutanoate + H2O = 4-aminobutanoate + urea.","definition_xrefs":["RHEA:19501","EC:3.5.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"guanidinobutyrase activity","secondary_identifiers":["MetaCyc:GUANIDINOBUTYRASE-RXN","KEGG_REACTION:R01990"],"synonyms":[{"name":"4-guanidinobutanoate amidinohydrolase activity","type":"related"},{"name":"4-guanidinobutyrate amidinobutyrase activity","type":"related"},{"name":"G-base activity","type":"related"},{"name":"GBH","type":"related"},{"name":"gamma-guanidinobutyrate amidinohydrolase activity","type":"related"},{"name":"gamma-guanidobutyrase activity","type":"related"},{"name":"guanidinobutyrate ureahydrolase activity","type":"related"}],"termid":"GO:0047971"}


id: MONDO:0012233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any Li-Fraumeni syndrome in which the cause of the disease is a mutation in the CHEK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"gene_count":0,"genotype_count":0,"name":"obsolete Li-Fraumeni syndrome 2 (obsolete MONDO:0012233)","secondary_identifiers":["OMIM:609265","DOID:0111504","MESH:C563755"],"synonyms":[{"name":"CHEK2 Li-Fraumeni syndrome","type":"exact"},{"name":"LFS2","type":"related"},{"name":"Li-Fraumeni syndrome 2","type":"exact"},{"name":"Li-Fraumeni syndrome caused by mutation in CHEK2","type":"exact"},{"name":"Li-Fraumeni syndrome type 2","type":"exact"}],"termid":"MONDO:0012233","xrefs":{"Monarch":{"xref_id":"0012233"}}}


id: MONDO:0018142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe neonatal pyruvate carboxylase (PC) deficiency (Type B) is a rare, extremely severe form of PC deficiency characterized by severe, early-onset metabolic acidosis, and a generally fatal outcome in early infancy.","definition_xrefs":["Orphanet:353314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate carboxylase deficiency disease","termid":"MONDO:0009949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"pyruvate carboxylase deficiency, severe neonatal type","secondary_identifiers":["UMLS:C5679929","GARD:17537","MEDGEN:1842956"],"synonyms":[{"name":"pyruvate carboxylase deficiency type B","type":"exact"}],"termid":"MONDO:0018142","xrefs":{"Monarch":{"xref_id":"0018142"}}}


id: GO:0018659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + NADPH + H+ + O2 = protocatechuate + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0109","MetaCyc:4-HYDROXYBENZOATE-3-MONOOXYGENASE-RXN"],"synonyms":[{"name":"4-hydroxybenzoate 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxybenzoate monooxygenase activity","type":"related"},{"name":"4-hydroxybenzoate,NADPH:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"p-hydroxybenzoate hydrolyase activity","type":"related"},{"name":"p-hydroxybenzoate hydroxylase activity","type":"broad"},{"name":"p-hydroxybenzoate-3-hydroxylase activity","type":"related"},{"name":"p-hydroxybenzoic acid hydrolase activity","type":"related"},{"name":"p-hydroxybenzoic acid hydroxylase activity","type":"broad"},{"name":"p-hydroxybenzoic hydroxylase activity","type":"related"},{"name":"para-hydroxybenzoate hydroxylase activity","type":"broad"}],"termid":"GO:0018659"}


id: MONDO:0014820
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85359],"is_not":false,"summary":null,"term":"MONDO:0014820"}]},"cv_name":"mondo","definition":"Any mitochondrial DNA depletion syndrome in which the cause of the disease is a mutation in the OPA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 14 (cardioencephalomyopathic type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080336","UMLS:C4225163","MEDGEN:903789","OMIM:616896"],"synonyms":[{"name":"MTDPS14","type":"exact"},{"name":"OPA1 mitochondrial DNA depletion syndrome","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 14 (cardioencephalomyopathic type)","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 14 (cardioencephalomyopathic type); MTDPS14","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 14 (encephalocardiomyopathic type)","type":"exact"},{"name":"mitochondrial DNA depletion syndrome caused by mutation in OPA1","type":"exact"}],"termid":"MONDO:0014820","terms_by_termid":{"MONDO:0014820":null},"xrefs":{"Monarch":{"xref_id":"0014820"}}}


id: PBO:0016542
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human U2AF1","termid":"PBO:0016542"}


id: MONDO:0011517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertension due to gain-of-function mutations in the mineralocorticoid receptor is a rare genetic hypertension characterized by a familial severe hypertension with an onset before age 20 years, associated with suppressed plasma renin and low aldosterone levels in the presence of low or normal levels of the mineralocorticoid aldosterone, that is highly resistant to antihypertensive medication. During pregnancy, there is a marked exacerbation of hypertension, accompanied by low serum potassium levels and undetectable aldosterone levels, but without signs of preeclampsia, requiring early delivery.","definition_xrefs":["Orphanet:88660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudohyperaldosteronism type 2","secondary_identifiers":["icd11.foundation:538048714","MEDGEN:343170","UMLS:C1854631","OMIM:605115","GARD:19093","MESH:C565359","SCTID:766937004"],"synonyms":[{"name":"early-onset hypertension with exacerbation in pregnancy","type":"exact"},{"name":"hypertension due to gain-of-function mutations in the mineralocorticoid receptor","type":"exact"},{"name":"hypertension, early-onset, autosomal dominant, with Severe exacerbation in pregnancy","type":"related"},{"name":"hypertension, early-onset, autosomal dominant, with exacerbation in pregnancy","type":"exact"},{"name":"hypertension, early-onset, autosomal dominant, with severe exacerbation in pregnancy","type":"related"}],"termid":"MONDO:0011517","xrefs":{"Monarch":{"xref_id":"0011517"}}}


id: PBO:0089664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh4","termid":"PBO:0089664"}


id: PBO:0058963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 6, pseudogene","termid":"PBO:0058963"}


id: GO:0080182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 4 of the histone.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:se"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 trimethylation (obsolete GO:0080182)","termid":"GO:0080182"}


id: PBO:0065008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 12","termid":"PBO:0065008"}


id: PBO:0080802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin for tRNA","termid":"PBO:0080802"}


id: PBO:0067248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 321, pseudogene","termid":"PBO:0067248"}


id: MOD:01992
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and the alpha-carbon of another amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"}


id: PBO:0052502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 14","termid":"PBO:0052502"}


id: MONDO:0020276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmentation disorder with eye involvement, excluding albinism (obsolete MONDO:0020276)","secondary_identifiers":["Orphanet:98708"],"termid":"MONDO:0020276","xrefs":{"Monarch":{"xref_id":"0020276"}}}


id: PBO:0076157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 pseudogene 1","termid":"PBO:0076157"}


id: PBO:0080923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 1","termid":"PBO:0080923"}


id: GO:0010719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial to mesenchymal transition","termid":"GO:0010719"}


id: GO:0036338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer of a virion, a complete fully infectious extracellular virus particle.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral membrane","termid":"GO:0036338"}


id: GO:0015262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete taurine channel activity (obsolete GO:0015262)","synonyms":[{"name":"taurine channel activity","type":"exact"}],"termid":"GO:0015262"}


id: PBO:0084429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major transcriptional repressor of DNA-damage-regulated genes; recruits repressors Tup1p and Cyc8p to their promoters; involved in DNA damage and replication checkpoint pathway; similar to a family of mammalian DNA binding RFX1-4 proteins","termid":"PBO:0084429"}


id: GO:1900891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pentadecane metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of pentadecane metabolic process","termid":"GO:1900890"},{"relation_name":"negatively_regulates","term_name":"pentadecane metabolic process","termid":"GO:1900633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pentadecane metabolic process","synonyms":[{"name":"down regulation of pentadecane metabolic process","type":"exact"},{"name":"down regulation of pentadecane metabolism","type":"related"},{"name":"down-regulation of pentadecane metabolic process","type":"exact"},{"name":"down-regulation of pentadecane metabolism","type":"related"},{"name":"downregulation of pentadecane metabolic process","type":"exact"},{"name":"downregulation of pentadecane metabolism","type":"related"},{"name":"inhibition of pentadecane metabolic process","type":"narrow"},{"name":"inhibition of pentadecane metabolism","type":"narrow"},{"name":"negative regulation of pentadecane metabolism","type":"related"}],"termid":"GO:1900891"}


id: GO:0047012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(P)+ + 3-beta-hydroxy-4-alpha-methyl-5-alpha-cholest-7-ene-4-beta-carboxylate = NAD(P)H + H+ + CO2 + 4-alpha-methyl-5-alpha-cholest-7-en-3-one.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity (obsolete GO:0047012)","synonyms":[{"name":"3-beta-hydroxy-4-alpha-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating) activity","type":"exact"}],"termid":"GO:0047012"}


id: FYPO:0001202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to calcium starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000298"],"is_obsolete":false,"name":"normal cellular response to calcium starvation","synonyms":[{"name":"normal cellular response to calcium depletion","type":"exact"},{"name":"normal cellular response to calcium deprivation","type":"exact"},{"name":"normal cellular response to calcium ion starvation","type":"exact"},{"name":"normal cellular response to calcium starvation during mitotic cell cycle","type":"related"},{"name":"normal cellular response to calcium starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0001202"}


id: GO:0051940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of catecholamine neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"regulates","term_name":"catecholamine uptake involved in synaptic transmission","termid":"GO:0051934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"regulation of catecholamine neurotransmitter reuptake","type":"exact"},{"name":"regulation of catecholamine neurotransmitter uptake","type":"exact"},{"name":"regulation of catecholamine uptake during transmission of nerve impulse","type":"broad"}],"termid":"GO:0051940"}


id: MONDO:0044767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pheochromocytoma of the adrenal gland that occurs during childhood.","definition_xrefs":["NCIT:C118822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland pheochromocytoma","termid":"MONDO:0004974"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood adrenal gland pheochromocytoma","secondary_identifiers":["GTR:AN0102113","DOID:0070325","MEDGEN:859271","UMLS:C3899677"],"synonyms":[{"name":"childhood adrenal gland pheochromocytoma","type":"exact"},{"name":"malignant childhood adrenal gland pheochromocytoma","type":"exact"},{"name":"pheochromocytoma, childhood","type":"related"}],"termid":"MONDO:0044767","xrefs":{"Monarch":{"xref_id":"0044767"}}}


id: FYPO:0006787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A)-specific ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal poly(A)-specific ribonuclease activity","termid":"FYPO:0006787"}


id: MONDO:0003473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma that arises from the spinal cord.","definition_xrefs":["NCIT:C3875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"},{"relation_name":"is_a","term_name":"ependymal tumor of spinal cord","termid":"MONDO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spinal cord ependymoma","secondary_identifiers":["MONDO:0021544","DOID:5503","SCTID:254949006","MEDGEN:65968","UMLS:C0238432"],"synonyms":[{"name":"ependymal neoplasm of the spinal cord","type":"exact"},{"name":"ependymoma of spinal cord","type":"exact"},{"name":"ependymoma of the spinal cord","type":"exact"},{"name":"spinal cord ependymoma","type":"exact"}],"termid":"MONDO:0003473","xrefs":{"Monarch":{"xref_id":"0003473"}}}


id: PBO:0005835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human THADA ortholog","termid":"PBO:0005835"}


id: PBO:0033780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0033780"}


id: FYPO:0007303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in metaphase under conditions where arrest does not normally occur, and in which chromosomes remain condensed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic metaphase","termid":"FYPO:0000620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic metaphase with condensed chromosomes","synonyms":[{"name":"abnormal cell cycle arrest in metaphase of mitotic cell cycle with condensed chromosomes","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic metaphase with condensed chromosomes during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in metaphase with condensed chromosomes","type":"exact"}],"termid":"FYPO:0007303"}


id: PBO:0038744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 3","termid":"PBO:0038744"}


id: PBO:0051331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-26 (pseudogene)","termid":"PBO:0051331"}


id: PBO:0048769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glia maturation factor gamma","termid":"PBO:0048769"}


id: MONDO:0020269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A ichthyosis associated with ocular features that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic ichthyosis associated with ocular features (obsolete MONDO:0020269)","secondary_identifiers":["Orphanet:98699"],"synonyms":[{"name":"syndrome associated with ichthyosis associated with ocular features","type":"exact"},{"name":"syndromic ichthyosis associated with ocular features","type":"exact"}],"termid":"MONDO:0020269","xrefs":{"Monarch":{"xref_id":"0020269"}}}


id: PBO:0083991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione-dependent oxidoreductase; mitochondrial matrix protein involved at an early step in the biogenesis of iron-sulfur centers along with Bol1p; hydroperoxide and superoxide-radical responsive; monothiol glutaredoxin subfamily member along with Grx3p and Grx4p","termid":"PBO:0083991"}


id: PBO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diadenosine 5',5'''-p1,p6-hexaphosphate hydrolase Aps1","termid":"PBO:0000200"}


id: PBO:0040693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCDIN3D antisense RNA 1","termid":"PBO:0040693"}


id: GO:0097231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a calcium ion stimulus.","definition_xrefs":["PMID:19363786","GOC:pf","PMID:21239624","PMID:8937985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"cellular response to calcium ion","termid":"GO:0071277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility in response to calcium ion","synonyms":[{"name":"Ca2+ facilitation of cell motility","type":"exact"},{"name":"calcium ion facilitation of cell motility","type":"exact"}],"termid":"GO:0097231"}


id: GO:0005381
data:
  {"annotated_genes":["SJAG_02473","SJAG_02968","SJAG_04867","SJAG_04675","SJAG_04260","SJAG_04737"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97581,112657,113232],"is_not":false,"summary":null,"term":"GO:0005381"},{"annotations":[103283,99983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015093"},{"annotations":[91959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061840"}]},"cv_name":"molecular_function","definition":"Enables the transfer of iron (Fe) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02473":null,"SJAG_02968":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04737":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"iron ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097689","Reactome:R-HSA-917936","GO:0016033","Reactome:R-HSA-5623558","Reactome:R-HSA-5655733","GO:0005382","Reactome:R-HSA-435349","Reactome:R-HSA-904830"],"synonyms":[{"name":"iron cation channel activity","type":"exact"},{"name":"iron channel activity","type":"exact"},{"name":"iron transporter activity","type":"exact"},{"name":"multicopper ferroxidase iron transport mediator activity","type":"related"},{"name":"transmembrane iron ion permease activity","type":"exact"},{"name":"transmembrane iron permease activity","type":"exact"},{"name":"zinc, iron permease activity","type":"related"}],"termid":"GO:0005381","terms_by_termid":{"GO:0005381":null,"GO:0015093":null,"GO:0061840":null}}


id: MONDO:0003033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the prostate.","definition_xrefs":["NCIT:C5528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate sarcoma","termid":"MONDO:0002854"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate angiosarcoma","secondary_identifiers":["DOID:4524","MEDGEN:235498","UMLS:C1335504"],"synonyms":[{"name":"angiosarcoma (disease) of prostate gland","type":"exact"},{"name":"angiosarcoma of prostate","type":"exact"},{"name":"angiosarcoma of the prostate","type":"exact"},{"name":"hemangiosarcoma of prostate","type":"exact"},{"name":"hemangiosarcoma of the prostate","type":"exact"},{"name":"prostate angiosarcoma","type":"exact"},{"name":"prostate gland angiosarcoma (disease)","type":"exact"},{"name":"prostate hemangiosarcoma","type":"exact"},{"name":"prostatic angiosarcoma","type":"exact"},{"name":"prostatic hemangiosarcoma","type":"exact"}],"termid":"MONDO:0003033","xrefs":{"Monarch":{"xref_id":"0003033"}}}


id: GO:1901296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment (obsolete GO:1901296)","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:1901296"}


id: GO:0005171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an hepatocyte growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"hepatocyte growth factor receptor binding","synonyms":[{"name":"HGF receptor binding","type":"exact"},{"name":"hepatocyte growth factor","type":"narrow"},{"name":"hepatocyte growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005171"}


id: PBO:0012839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of rudimentary homolog Erh1","termid":"PBO:0012839"}


id: PBO:0051851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 4 pseudogene 1","termid":"PBO:0051851"}


id: PBO:0087192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit AC40; common to RNA polymerase I and III; predominant determinant targeting Ty1 integration upstream of Pol III-transcribed genes","termid":"PBO:0087192"}


id: PBO:0066140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB1 inducible coiled-coil 1","termid":"PBO:0066140"}


id: MOD:00935
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Oxidation of methionine to methionine sulfoxide with neutral loss of CH3SOH.","definition_xrefs":["PubMed:18688235","PubMed:9004526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine oxidation with neutral loss of 64 Da","termid":"MOD:00935"}


id: FYPO:0006880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the center (as observed end-on) of the site of cell division is increased.","definition_xrefs":["PMID:30044717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to center of cell division site","synonyms":[{"name":"abnormal protein localization to cell division site, protein concentrated at division site center","type":"exact"},{"name":"increased protein localization at division center","type":"exact"},{"name":"increased protein recruitment to center of cell division site","type":"related"}],"termid":"FYPO:0006880"}


id: PBO:0076915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 gamma","termid":"PBO:0076915"}


id: SO:0002124
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rearranges at the DNA level and codes the diversity region of the variable domain of an immunoglobuin (IG) gene.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_D_gene","synonyms":[{"name":"IGD_gene","type":"exact"},{"name":"Immunoglobulin_Diversity_ gene","type":"exact"},{"name":"immunoglobulin_D_gene","type":"exact"}],"termid":"SO:0002124"}


id: PBO:0065854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 5","termid":"PBO:0065854"}


id: MONDO:0004091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basaloid squamous cell carcinoma that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"basaloid squamous cell carcinoma","termid":"MONDO:0003486"},{"relation_name":"is_a","term_name":"keratinizing squamous cell carcinoma","termid":"MONDO:0005056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin basaloid carcinoma","secondary_identifiers":["UMLS:C1335973","DOID:7049","MEDGEN:233446","NCIT:C27543"],"synonyms":[{"name":"basaloid skin squamous cell carcinoma","type":"exact"},{"name":"basaloid squamous cell skin carcinoma","type":"related"},{"name":"skin basaloid carcinoma","type":"exact"},{"name":"skin basaloid squamous cell carcinoma","type":"exact"},{"name":"zone of skin basaloid squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004091","xrefs":{"Monarch":{"xref_id":"0004091"}}}


id: MONDO:0013983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive hypohidrotic ectodermal dysplasia","termid":"MONDO:0016619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 11B, hypohidrotic/hair/tooth type, autosomal recessive","secondary_identifiers":["GARD:15885","UMLS:C3539920","OMIM:614941","MEDGEN:761671","DOID:0111654"],"synonyms":[{"name":"ECTD11B","type":"related"},{"name":"ectodermal dysplasia 11B, hypohidrotic/hair/tooth type, autosomal recessive","type":"exact"},{"name":"ectodermal dysplasia, anhidrotic","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic","type":"related"}],"termid":"MONDO:0013983","xrefs":{"Monarch":{"xref_id":"0013983"}}}


id: PBO:0082337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding protein that is a subunit of the HOPS and CORVET complexes; essential for protein sorting, vesicle docking, and fusion at the vacuole; binds to SNARE domains","termid":"PBO:0082337"}


id: MONDO:0012169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 3","secondary_identifiers":["UMLS:C1837008","MEDGEN:373230","DOID:0080860","OMIM:608996","MESH:C563816"],"synonyms":[{"name":"Pof3","type":"related"},{"name":"premature ovarian failure 3","type":"exact"},{"name":"premature ovarian failure type 3","type":"exact"}],"termid":"MONDO:0012169","xrefs":{"Monarch":{"xref_id":"0012169"}}}


id: PBO:0050581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 5","termid":"PBO:0050581"}


id: PBO:0048807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 1 like","termid":"PBO:0048807"}


id: PBO:0052431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klotho","termid":"PBO:0052431"}


id: MONDO:0021673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-bacterial disorder","secondary_identifiers":["MEDGEN:928118","UMLS:C4302449"],"termid":"MONDO:0021673","xrefs":{"Monarch":{"xref_id":"0021673"}}}


id: PBO:0110349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMPK1 pseudogene 1","termid":"PBO:0110349"}


id: GO:0050111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + 7n H+ + n methylmalonyl-CoA + 2n NADPH = n CO2 + n CoA + n H2O + multi-methyl-branched acyl-CoA + 2n NADP+.","definition_xrefs":["EC:2.3.1.111","RHEA:10588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"mycocerosate synthase activity","secondary_identifiers":["MetaCyc:MYCOCEROSATE-SYNTHASE-RXN","KEGG_REACTION:R05189"],"synonyms":[{"name":"acyl-CoA:methylmalonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing)","type":"related"},{"name":"mycocerosic acid synthase activity","type":"related"}],"termid":"GO:0050111"}


id: PBO:0082114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-CoA carboxylase, biotin containing enzyme; catalyzes carboxylation of cytosolic acetyl-CoA to form malonyl-CoA and regulates histone acetylation by regulating the availability of acetyl-CoA; rate-limiting step for de novo biosynthesis of long-chain fatty acids; translational regulation in response to nutrients and cell cycle stage depends on its upstream ORF; ACC1 has a paralog, HFA1, that arose from the whole genome duplication","termid":"PBO:0082114"}


id: MONDO:0006664
data:
  {"annotated_genes":["SJAG_02431","SJAG_02730","SJAG_03703","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85496,85495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013567"},{"annotations":[84867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013011"},{"annotations":[86184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013770"}]},"cv_name":"mondo","definition":"Interauricular communication is a congenital malformation characterized by a communication between the atrial chambers of the heart.","definition_xrefs":["Orphanet:1478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart septal defect","termid":"MONDO:0002078"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_02730":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84473","NANDO:2100085","OMIMPS:108800","EFO:1000825","GARD:15018","DOID:1882","MedDRA:10003664","MedDRA:10019308","MESH:D006344","SCTID:253366007","MedDRA:10068864","UMLS:C0018817","NORD:820","MEDGEN:6753"],"synonyms":[{"name":"ASD","type":"exact"},{"name":"Atrial Septal Defects","type":"exact"},{"name":"atrial septal defect","type":"exact"},{"name":"atrial septum defect","type":"exact"},{"name":"atrioseptal defect","type":"exact"},{"name":"auricular septal defect","type":"exact"},{"name":"congenital atrial septal defect","type":"exact"},{"name":"interatrial communication","type":"related"},{"name":"interatrial septal defect","type":"exact"},{"name":"interauricular communication","type":"exact"},{"name":"interauricular septal defect","type":"exact"}],"termid":"MONDO:0006664","terms_by_termid":{"MONDO:0013011":null,"MONDO:0013567":null,"MONDO:0013770":null},"xrefs":{"Monarch":{"xref_id":"0006664"}}}


id: GO:0010109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photosynthesis.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photosynthesis","termid":"GO:0010109"}


id: PBO:0046178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II","termid":"PBO:0046178"}


id: SO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_threonyl_carbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_threonyl_carbamoyladenosine","secondary_identifiers":["RNAMOD:012"],"synonyms":[{"name":"2-methylthio-N6-threonyl carbamoyladenosine","type":"exact"},{"name":"ms2t6A","type":"exact"},{"name":"two methylthio N6 threonyl carbamoyladenosine","type":"exact"}],"termid":"SO:0001306"}


id: PATO:0001212
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001212 length_unit (obsolete PATO:0001212)","termid":"PATO:0001212"}


id: PBO:0085699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in retrograde transport to the cis-Golgi network; forms heterodimer with Rgp1p that acts as a GTP exchange factor for Ypt6p; involved in transcription of rRNA and ribosomal protein genes","termid":"PBO:0085699"}


id: MONDO:0015866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant tumor of fallopian tubes (obsolete MONDO:0015866)","termid":"MONDO:0015866","xrefs":{"Monarch":{"xref_id":"0015866"}}}


id: GO:0018202
data:
  {"annotated_genes":["SJAG_01058","SJAG_04085","SJAG_02467","SJAG_04544","SJAG_00235","SJAG_04846","SJAG_00251","SJAG_01418"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115168,109167,116898,100208,104718,100064,118210,110612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017183"}]},"cv_name":"biological_process","definition":"The modification of peptidyl-histidine.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00251":null,"SJAG_01058":null,"SJAG_01418":null,"SJAG_02467":null,"SJAG_04085":null,"SJAG_04544":null,"SJAG_04846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0018202","terms_by_termid":{"GO:0017183":null}}


id: MONDO:0021358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the hypopharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of hypopharynx","secondary_identifiers":["MEDGEN:43797","UMLS:C0020627","NCIT:C3127","SCTID:126686005"],"synonyms":[{"name":"hypopharyngeal neoplasm","type":"exact"},{"name":"hypopharyngeal neoplasms","type":"exact"},{"name":"hypopharyngeal tumor","type":"exact"},{"name":"hypopharyngeal tumour","type":"exact"},{"name":"hypopharynx neoplasm","type":"exact"},{"name":"hypopharynx neoplasm (disease)","type":"exact"},{"name":"hypopharynx tumor","type":"exact"},{"name":"hypopharynx tumour","type":"exact"},{"name":"neoplasm of hypopharynx","type":"exact"},{"name":"neoplasm of the hypopharynx","type":"exact"},{"name":"tumor of hypopharynx","type":"exact"},{"name":"tumor of the hypopharynx","type":"exact"},{"name":"tumour of hypopharynx","type":"exact"},{"name":"tumour of the hypopharynx","type":"exact"}],"termid":"MONDO:0021358","xrefs":{"Monarch":{"xref_id":"0021358"}}}


id: PBO:0053945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1248","termid":"PBO:0053945"}


id: GO:0039557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway by reducing the activity of IRF7 (interferon regulatory factor-7). IRF7 a transcription factor in the RIG-I/MDA-5 signaling pathway. Viral infection triggers phosphorylation of cytoplasmic IRF7, which allows IRF7 to form a homodimer, migrate to the nucleus, and activate transcription of IFN-alpha and IFN-beta genes.","definition_xrefs":["PMID:16014964","PMID:11943871","PMID:19557165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF7 activity","secondary_identifiers":["VZ:653"],"synonyms":[{"name":"inhibition of host IRF7 by virus","type":"related"},{"name":"inhibition of host interferon regulatory factor-7 by virus","type":"related"},{"name":"suppression by virus of host IRF7 activity","type":"related"},{"name":"suppression by virus of host interferon regulatory factor 7 activity","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF7 activity","type":"narrow"}],"termid":"GO:0039557"}


id: MONDO:0016959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 8","termid":"MONDO:0016929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 8","secondary_identifiers":["icd11.foundation:397762525","Orphanet:262896","MEDGEN:1826035","GARD:20879","UMLS:C5679703"],"synonyms":[{"name":"partial duplication of chromosome 8q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 8","type":"exact"},{"name":"partial trisomy of chromosome 8q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 8","type":"exact"}],"termid":"MONDO:0016959","xrefs":{"Monarch":{"xref_id":"0016959"}}}


id: PBO:0109601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CR1 antisense RNA 1","termid":"PBO:0109601"}


id: GO:0003352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"cilium movement","termid":"GO:0003341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cilium movement","secondary_identifiers":["GO:1900172"],"synonyms":[{"name":"regulation of flagellar movement","type":"related"},{"name":"regulation of flagellum movement","type":"related"},{"name":"regulation of microtubule-based flagellum movement","type":"exact"}],"termid":"GO:0003352"}


id: MONDO:0017504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"apodia","termid":"MONDO:0017446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"apodia, unilateral","secondary_identifiers":["Orphanet:295105","icd11.foundation:1499762342"],"synonyms":[{"name":"congenital absence of foot, unilateral","type":"exact"}],"termid":"MONDO:0017504","xrefs":{"Monarch":{"xref_id":"0017504"}}}


id: MOD:00144
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["DeltaMass:0","PubMed:2536325","PubMed:170910","ChEBI:17627","RESID:AA0135","PubMed:192772","PubMed:9535866","Unimod:390#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"heme-L-cysteine","synonyms":[{"name":"(12-ethenyl-7-[(1S)-1-([(2R)-2-amino-2-carboxyethyl]sulfanyl)ethyl]-3,8,13,17-tetramethyl-21H,23H-porphine-2,18-bis[2-carboxyethyl]-N21,N22,N23,N24)-ferrate","type":"exact"},{"name":"4-[1-(S-cysteinyl)ethyl]protoporphyrin IX","type":"exact"},{"name":"BINDING Heme (covalent; via 1 link)","type":"exact"},{"name":"Heme","type":"related"},{"name":"HemeCys1","type":"exact"},{"name":"S-Heme (on Cysteine)","type":"exact"},{"name":"cysteinyl heme","type":"exact"},{"name":"heme","type":"related"},{"name":"heme-L-cysteine","type":"exact"}],"termid":"MOD:00144"}


id: MONDO:0022919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of cytokine receptor activity.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cytokine receptor deficiency","synonyms":[{"name":"cytokine receptor activity disease","type":"exact"},{"name":"disorder of cytokine receptor activity","type":"exact"}],"termid":"MONDO:0022919","xrefs":{"Monarch":{"xref_id":"0022919"}}}


id: PATO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's structureresembling an irregular meshwork with cross-linking struts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trabecular","termid":"PATO:0002121"}


id: GO:0097057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising tumor necrosis factor (TNF) receptor-associated factor 2 (TRAF2) and glutathione S-transferase pi 1 (GSTP1). This complex is thought to disrupt the TNF signaling cascade, thus down-regulating inflammatory responses.","definition_xrefs":["GOC:BHF","PMID:16636664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TRAF2-GSTP1 complex","termid":"GO:0097057"}


id: FYPO:0008105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromatin moves within the nucleus to a greater extent than normal during stationary phase.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin mobility","termid":"FYPO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"increased chromatin mobility during stationary phase","termid":"FYPO:0008105"}


id: GO:0098792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective degradation of intracellular pathogen or some part of an intracellular pathogen (e.g. viral capsid) by macroautophagy.","definition_xrefs":["GOC:autophagy","GOC:pad","PMID:25497060","PMID:20159618","PMID:19802565","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"},{"relation_name":"part_of","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"xenophagy","termid":"GO:0098792"}


id: GO:1903333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein folding.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of protein folding","termid":"GO:1903332"},{"relation_name":"negatively_regulates","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0008150","GO:0006457"],"is_obsolete":false,"name":"negative regulation of protein folding","synonyms":[{"name":"down regulation of alpha-tubulin folding","type":"narrow"},{"name":"down regulation of beta-tubulin folding","type":"narrow"},{"name":"down regulation of chaperone activity","type":"related"},{"name":"down regulation of chaperonin ATPase activity","type":"related"},{"name":"down regulation of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"down regulation of co-chaperone activity","type":"related"},{"name":"down regulation of co-chaperonin activity","type":"related"},{"name":"down regulation of glycoprotein-specific chaperone activity","type":"related"},{"name":"down regulation of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"down regulation of protein complex assembly, multichaperone pathway","type":"related"},{"name":"down regulation of protein folding","type":"exact"},{"name":"down-regulation of alpha-tubulin folding","type":"narrow"},{"name":"down-regulation of beta-tubulin folding","type":"narrow"},{"name":"down-regulation of chaperone activity","type":"related"},{"name":"down-regulation of chaperonin ATPase activity","type":"related"},{"name":"down-regulation of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"down-regulation of co-chaperone activity","type":"related"},{"name":"down-regulation of co-chaperonin activity","type":"related"},{"name":"down-regulation of glycoprotein-specific chaperone activity","type":"related"},{"name":"down-regulation of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"down-regulation of protein complex assembly, multichaperone pathway","type":"related"},{"name":"down-regulation of protein folding","type":"exact"},{"name":"downregulation of alpha-tubulin folding","type":"narrow"},{"name":"downregulation of beta-tubulin folding","type":"narrow"},{"name":"downregulation of chaperone activity","type":"related"},{"name":"downregulation of chaperonin ATPase activity","type":"related"},{"name":"downregulation of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"downregulation of co-chaperone activity","type":"related"},{"name":"downregulation of co-chaperonin activity","type":"related"},{"name":"downregulation of glycoprotein-specific chaperone activity","type":"related"},{"name":"downregulation of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"downregulation of protein complex assembly, multichaperone pathway","type":"related"},{"name":"downregulation of protein folding","type":"exact"},{"name":"inhibition of alpha-tubulin folding","type":"narrow"},{"name":"inhibition of beta-tubulin folding","type":"narrow"},{"name":"inhibition of chaperone activity","type":"related"},{"name":"inhibition of chaperonin ATPase activity","type":"related"},{"name":"inhibition of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"inhibition of co-chaperone activity","type":"related"},{"name":"inhibition of co-chaperonin activity","type":"related"},{"name":"inhibition of glycoprotein-specific chaperone activity","type":"related"},{"name":"inhibition of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"inhibition of protein complex assembly, multichaperone pathway","type":"related"},{"name":"inhibition of protein folding","type":"narrow"},{"name":"negative regulation of alpha-tubulin folding","type":"narrow"},{"name":"negative regulation of beta-tubulin folding","type":"narrow"},{"name":"negative regulation of chaperone activity","type":"related"},{"name":"negative regulation of chaperonin ATPase activity","type":"related"},{"name":"negative regulation of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"negative regulation of co-chaperone activity","type":"related"},{"name":"negative regulation of co-chaperonin activity","type":"related"},{"name":"negative regulation of glycoprotein-specific chaperone activity","type":"related"},{"name":"negative regulation of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"negative regulation of protein complex assembly, multichaperone pathway","type":"related"}],"termid":"GO:1903333"}


id: _global:has_pathogen
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"host_of","termid":"_global:host_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_pathogen","secondary_identifiers":["RO:0002557"],"termid":"_global:has_pathogen"}


id: PBO:0086431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein; member of DUP240 gene family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086431"}


id: FYPO:0000333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G1/S transition of the mitotic cell cycle begins later than normal. The duration of G1 phase is thus longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"},{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal mitotic G1 phase progression","termid":"FYPO:0000602"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"mitotic G1/S phase transition delay","secondary_identifiers":["FYPO:0000543","FYPO:0000480","FYPO:0000396"],"synonyms":[{"name":"G1/S transition delay during mitotic cell cycle","type":"related"},{"name":"cell cycle progression through the G1/S phase transition: delayed","type":"related"},{"name":"delayed cell cycle progression through mitotic G1/S phase transition","type":"exact"},{"name":"delayed mitotic G1 phase progression","type":"related"},{"name":"increased duration of mitotic G1 phase","type":"related"},{"name":"increased duration of mitotic G1 phase during vegetative growth","type":"related"},{"name":"increased duration of mitotic G1 phase progression","type":"related"},{"name":"mitotic G1/S phase transition delay during vegetative growth","type":"exact"},{"name":"mitotic G1/S transition delay","type":"exact"},{"name":"mitotic cell cycle delay at G1/S transition","type":"exact"},{"name":"mitotic cell cycle delay in G1","type":"related"},{"name":"transient cell cycle arrest in mitotic G1 phase","type":"exact"}],"termid":"FYPO:0000333"}


id: PBO:0056939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR7-3 host gene","termid":"PBO:0056939"}


id: PBO:0062797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL sphingolipid biosynthesis regulator 2","termid":"PBO:0062797"}


id: PBO:0063451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 9A","termid":"PBO:0063451"}


id: PBO:0034639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K16_acetylation_at_telomere","termid":"PBO:0034639"}


id: SO:0000876
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that is bound by a nucleic acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bound_by_factor","termid":"SO:0000277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bound_by_nucleic_acid","synonyms":[{"name":"bound by nucleic acid","type":"exact"}],"termid":"SO:0000876"}


id: GO:0140463
data:
  {"annotated_genes":["SJAG_04508","SJAG_01205","SJAG_04932","SJAG_03989","SJAG_01601","SJAG_01377","SJAG_02551","SJAG_04613","SJAG_00213","SJAG_03543","SJAG_03942","SJAG_03941","SJAG_02097","SJAG_02513","SJAG_00640","SJAG_01873","SJAG_04942","SJAG_04142","SJAG_04253","SJAG_04755","SJAG_04623","SJAG_01713","SJAG_00266","SJAG_00302","SJAG_00335"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87386,87560,87678,88875,91303,92336,93452,98635,99231,101510,101511,101512,107165,107441,108777,110673,110942,111185,111186,111632,112067,112068,112069,112421,112674,114015,114742,117153,117161],"is_not":false,"summary":null,"term":"GO:0140463"}]},"cv_name":"molecular_function","definition":"An adaptor activity that brings together a protein and a region of the chromatin, such as a nucleosome, to establish or maintain the chromatin localization of the protein, or the complex to which it belongs.","definition_xrefs":["PMID:32277274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00213":null,"SJAG_00266":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00640":null,"SJAG_01205":null,"SJAG_01377":null,"SJAG_01601":null,"SJAG_01713":null,"SJAG_01873":null,"SJAG_02097":null,"SJAG_02513":null,"SJAG_02551":null,"SJAG_03543":null,"SJAG_03941":null,"SJAG_03942":null,"SJAG_03989":null,"SJAG_04142":null,"SJAG_04253":null,"SJAG_04508":null,"SJAG_04613":null,"SJAG_04623":null,"SJAG_04755":null,"SJAG_04932":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"chromatin-protein adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromatin adaptor","type":"exact"},{"name":"chromatin adaptor activity","type":"exact"},{"name":"chromatin receptor","type":"exact"},{"name":"chromatin recruitment","type":"related"},{"name":"chromatin-protein adaptor","type":"exact"},{"name":"protein-chromatin adaptor activity","type":"exact"}],"termid":"GO:0140463","terms_by_termid":{"GO:0140463":null}}


id: MONDO:0018343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial periodic paralysis","termid":"MONDO:0000995"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"periodic paralysis with later-onset distal motor neuropathy","secondary_identifiers":["GARD:21634","MEDGEN:1670241","UMLS:C4751573","Orphanet:397750"],"termid":"MONDO:0018343","xrefs":{"Monarch":{"xref_id":"0018343"}}}


id: GO:0030818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cAMP biosynthetic process (obsolete GO:0030818)","synonyms":[{"name":"down regulation of cAMP biosynthetic process","type":"exact"},{"name":"down-regulation of cAMP biosynthetic process","type":"exact"},{"name":"downregulation of cAMP biosynthetic process","type":"exact"},{"name":"inhibition of cAMP biosynthetic process","type":"narrow"},{"name":"negative regulation of 3',5' cAMP biosynthesis","type":"exact"},{"name":"negative regulation of 3',5' cAMP biosynthetic process","type":"exact"},{"name":"negative regulation of 3',5'-cAMP biosynthesis","type":"exact"},{"name":"negative regulation of 3',5'-cAMP biosynthetic process","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate biosynthesis","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate biosynthetic process","type":"exact"},{"name":"negative regulation of cAMP anabolism","type":"exact"},{"name":"negative regulation of cAMP biosynthesis","type":"exact"},{"name":"negative regulation of cAMP formation","type":"exact"},{"name":"negative regulation of cAMP synthesis","type":"exact"},{"name":"negative regulation of cyclic AMP biosynthesis","type":"exact"},{"name":"negative regulation of cyclic AMP biosynthetic process","type":"exact"}],"termid":"GO:0030818"}


id: PBO:0070391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ROR1 antisense RNA 1","termid":"PBO:0070391"}


id: PBO:0000872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1752 family protein, involved in regulation of transcription (predicted)","termid":"PBO:0000872"}


id: MONDO:0020233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dentocutaneous disease with cataract (obsolete MONDO:0020233)","secondary_identifiers":["Orphanet:98649"],"termid":"MONDO:0020233","xrefs":{"Monarch":{"xref_id":"0020233"}}}


id: GO:0042613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen.","definition_xrefs":["PMID:15928678","GOC:add","GOC:jl","ISBN:0120781859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MHC class II protein complex","termid":"GO:0042613"}


id: PBO:0049122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor associated sorting protein 2","termid":"PBO:0049122"}


id: SO:0000590
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The signal recognition particle (SRP) is a universally conserved ribonucleoprotein. It is involved in the co-translational targeting of proteins to membranes. The eukaryotic SRP consists of a 300-nucleotide 7S RNA and six proteins: SRPs 72, 68, 54, 19, 14, and 9. Archaeal SRP consists of a 7S RNA and homologues of the eukaryotic SRP19 and SRP54 proteins. In most eubacteria, the SRP consists of a 4.5S RNA and the Ffh protein (a homologue of the eukaryotic SRP54 protein). Eukaryotic and archaeal 7S RNAs have very similar secondary structures, with eight helical elements. These fold into the Alu and S domains, separated by a long linker region. Eubacterial SRP is generally a simpler structure, with the M domain of Ffh bound to a region of the 4.5S RNA that corresponds to helix 8 of the eukaryotic and archaeal SRP S domain. Some Gram-positive bacteria (e.g. Bacillus subtilis), however, have a larger SRP RNA that also has an Alu domain. The Alu domain is thought to mediate the peptide chain elongation retardation function of the SRP. The universally conserved helix which interacts with the SRP54/Ffh M domain mediates signal sequence recognition. In eukaryotes and archaea, the SRP19-helix 6 complex is thought to be involved in SRP assembly and stabilizes helix 8 for SRP54 binding.","direct_ancestors":[{"relation_name":"derives_from","term_name":"SRP_RNA_primary_transcript","termid":"SO:0000589"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA","synonyms":[{"name":"7S RNA","type":"related"},{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:SRP_RNA","type":"exact"},{"name":"SRP RNA","type":"exact"},{"name":"signal recognition particle RNA","type":"related"}],"termid":"SO:0000590"}


id: PBO:0073727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 8","termid":"PBO:0073727"}


id: PBO:0061216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 8","termid":"PBO:0061216"}


id: PBO:0073482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum/glucocorticoid regulated kinase family member 3","termid":"PBO:0073482"}


id: GO:1904763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a chaperone-mediated autophagy translocation complex.","definition_xrefs":["GOC:pad","GO_REF:0000079","GOC:TermGenie","GOC:PARL","PMID:18644871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044085","GO:0065003","GO:0030163"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex assembly","synonyms":[{"name":"CMA receptor complex assembly","type":"related"},{"name":"CMA receptor complex formation","type":"related"},{"name":"CMA translocation complex assembly","type":"exact"},{"name":"CMA translocation complex formation","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex assembly","type":"related"},{"name":"chaperone-mediated autophagy receptor complex formation","type":"related"},{"name":"chaperone-mediated autophagy translocation complex formation","type":"exact"}],"termid":"GO:1904763"}


id: FYPO:0002195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable and have normal morphology (i.e. size, shape, and structure) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal morphology viable vegetative cell population (obsolete FYPO:0002195)","synonyms":[{"name":"viable vegetative cell population with normal cell morphology","type":"exact"},{"name":"viable vegetative cell population with normal cell shape and size","type":"exact"}],"termid":"FYPO:0002195"}


id: GO:0140877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mevastatin , also known as compactin or ML-236B, and which acts as a potent competitive inhibitor of HMG-CoA reductase.","definition_xrefs":["PMID:12172803","PMID:12242508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"mevastatin biosynthetic process","synonyms":[{"name":"mevastatin anabolism","type":"exact"},{"name":"mevastatin biosynthesis","type":"exact"},{"name":"mevastatin formation","type":"exact"},{"name":"mevastatin synthesis","type":"exact"}],"termid":"GO:0140877"}


id: PBO:0112835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved nucleolar protein, human CCDC137 ortholog, implicated in rDNA metabolism or ribosome biogenesis","termid":"PBO:0112835"}


id: PBO:0029268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_during_vegetative_growth","termid":"PBO:0029268"}


id: FYPO:0003795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha-glucan level","termid":"FYPO:0001196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell wall alpha-glucan level","synonyms":[{"name":"normal cell wall alpha-D-glucan level","type":"exact"},{"name":"normal cell wall alpha-glucan accumulation","type":"related"},{"name":"normal cell wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"normal cell wall alpha-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0003795"}


id: MONDO:0012946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the CDH15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 3","secondary_identifiers":["GARD:16454","MEDGEN:436447","OMIM:612580","UMLS:C2675488","DOID:0070033","MESH:C567241"],"synonyms":[{"name":"CDH15 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD3","type":"exact"},{"name":"autosomal dominant intellectual disability 3","type":"exact"},{"name":"autosomal dominant mental retardation 3","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 3","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in CDH15","type":"exact"},{"name":"intellectual disability, autosomal dominant 3","type":"exact"},{"name":"intellectual disability, autosomal dominant type 3","type":"exact"},{"name":"mental retardation, autosomal dominant 3","type":"related"},{"name":"mental retardation, autosomal dominant type 3","type":"exact"}],"termid":"MONDO:0012946","xrefs":{"Monarch":{"xref_id":"0012946"}}}


id: PBO:0025442
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocystinuria","termid":"PBO:0025442"}


id: MONDO:0024326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign neoplasm that arises from the mesothelial cells of the pleura. It is characterized by a proliferation of epithelioid cells forming glandular and tubular patterns in a fibrous stroma.","definition_xrefs":["NCIT:C4499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign mesothelioma","termid":"MONDO:0002373"},{"relation_name":"is_a","term_name":"pleural mesothelioma","termid":"MONDO:0003308"},{"relation_name":"is_a","term_name":"adenomatoid tumor","termid":"MONDO:0004230"},{"relation_name":"is_a","term_name":"benign neoplasm of pleura","termid":"MONDO:0021457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleural adenomatoid tumor","secondary_identifiers":["Orphanet:675814","MEDGEN:83408","UMLS:C0346112"],"synonyms":[{"name":"benign mesothelioma of pleura","type":"exact"},{"name":"benign mesothelioma of the pleura","type":"exact"},{"name":"pleura adenomatoid tumor","type":"exact"},{"name":"pleura adenomatoid tumour","type":"exact"},{"name":"pleural adenomatoid tumor","type":"exact"},{"name":"pleural benign mesothelioma","type":"exact"},{"name":"pleural mesothelioma, benign","type":"exact"}],"termid":"MONDO:0024326","xrefs":{"Monarch":{"xref_id":"0024326"}}}


id: PBO:0075295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 33 pseudogene 1","termid":"PBO:0075295"}


id: GO:0106319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4R)-limonene + NADH + H+ + O2 = NAD+ + H2O + (4R)-limonene-1,2-epoxide.","definition_xrefs":["RHEA:26093"],"gene_count":0,"genotype_count":0,"name":"obsolete (R)-limonene 1,2-monooxygenase NADH activity (obsolete GO:0106319)","termid":"GO:0106319"}


id: PBO:0014593
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA Maintenance","termid":"PBO:0014593"}


id: MONDO:1012477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disproportionate short-limbed chondrodysplasia, non-human animal","termid":"MONDO:1011965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disproportionate short-limbed chondrodysplasia, dog","secondary_identifiers":["OMIA:001886-9615"],"termid":"MONDO:1012477","xrefs":{"Monarch":{"xref_id":"1012477"}}}


id: MONDO:0024987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic urogenital tract malformation (obsolete MONDO:0024987)","secondary_identifiers":["Orphanet:156622"],"termid":"MONDO:0024987","xrefs":{"Monarch":{"xref_id":"0024987"}}}


id: GO:0032251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of adenosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleoside transport","termid":"GO:0032248"},{"relation_name":"is_a","term_name":"regulation of adenosine transport","termid":"GO:0032249"},{"relation_name":"positively_regulates","term_name":"adenosine transport","termid":"GO:0032238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of adenosine transport","synonyms":[{"name":"activation of adenosine transport","type":"narrow"},{"name":"stimulation of adenosine transport","type":"narrow"},{"name":"up regulation of adenosine transport","type":"exact"},{"name":"up-regulation of adenosine transport","type":"exact"},{"name":"upregulation of adenosine transport","type":"exact"}],"termid":"GO:0032251"}


id: PBO:0113259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal matrix-localized lipase; target of SCFCdc4 ubiquitin ligase complex; peroxisomal, nuclear and cytosolic localization is dependent on the presence of oleate; transcription is regulated by Azf1p; LPX2 has a paralog, EIS1, that arose from the whole genome duplication","termid":"PBO:0113259"}


id: MONDO:0003684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually low grade chondrosarcoma characterized by the presence of tumor cells with clear cytoplasm. It usually arises in the epiphyseal ends of long bones.","definition_xrefs":["NCIT:C6475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone chondrosarcoma","termid":"MONDO:0000515"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clear cell chondrosarcoma","secondary_identifiers":["MEDGEN:226848","ICDO:9242/3","DOID:5867","UMLS:C1266167"],"synonyms":[{"name":"clear cell chondrosarcoma","type":"exact"},{"name":"clear cell chondrosarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003684","xrefs":{"Monarch":{"xref_id":"0003684"}}}


id: PBO:0075112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 161","termid":"PBO:0075112"}


id: MONDO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease caused by infection with rickettsia conorii subsp. coronorii.","definition_xrefs":["PMID:18760001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsia conorii infectious disease","termid":"MONDO:0005677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Indian tick typhus","secondary_identifiers":["MEDGEN:1843392","DOID:0050042","UMLS:C0343768","Orphanet:101335"],"termid":"MONDO:0000229","xrefs":{"Monarch":{"xref_id":"0000229"}}}


id: PBO:0062580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 4","termid":"PBO:0062580"}


id: MOD:00334
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between the tele nitrogen of a histidine residue and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["Unimod:390#H","RESID:AA0329","PubMed:12033922","PubMed:12121092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-heme-L-histidine","synonyms":[{"name":"(S)-[7-ethenyl-12-[1-((2-amino-2-carboxyethyl)-1H-imidazol-1-yl)ethyl]-3,8,13,17-tetramethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"1'-heme-L-histidine","type":"exact"},{"name":"2-[1-(N1'-histidyl)ethyl]protoporphyrin IX","type":"exact"},{"name":"BINDING Heme (covalent; via tele nitrogen)","type":"exact"},{"name":"Heme","type":"related"},{"name":"N(epsilon)-histidyl heme","type":"exact"},{"name":"N(tau)-histidyl heme","type":"exact"},{"name":"N1'-histidyl heme","type":"exact"},{"name":"heme","type":"related"},{"name":"tele-histidyl heme","type":"exact"}],"termid":"MOD:00334"}


id: GO:0006166
data:
  {"annotated_genes":["SJAG_00134","SJAG_01070","SJAG_01859","SJAG_03096","SJAG_03881","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89288,93040,93258,115283],"is_not":false,"summary":null,"term":"GO:0006166"},{"annotations":[116282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[107962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"}]},"cv_name":"biological_process","definition":"Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"},{"relation_name":"is_a","term_name":"nucleoside salvage","termid":"GO:0043174"},{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleoside salvage","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:P121-PWY"],"termid":"GO:0006166","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null}}


id: PBO:0078323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA aspartic acid methyltransferase 1","termid":"PBO:0078323"}


id: PBO:0030945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_linear_element_assembly","termid":"PBO:0030945"}


id: GO:1903513
data:
  {"annotated_genes":["SJAG_03345","SJAG_00530"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88776,92455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030970"}]},"cv_name":"biological_process","definition":"The directed movement of substances from endoplasmic reticulum to cytosol.","definition_xrefs":["PMID:16402920","GO_REF:0000076","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00530":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"endoplasmic reticulum to cytosol transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER to cytosol transport","type":"exact"}],"termid":"GO:1903513","terms_by_termid":{"GO:0030970":null}}


id: PBO:0050840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly factor IBA57","termid":"PBO:0050840"}


id: FYPO:0005488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to arsenite ions. Cells stop growing (and may die) at a concentration of arsenite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to arsenite","synonyms":[{"name":"hypersensitive to arsenite","type":"exact"},{"name":"sensitive to arsenite during mitotic cell cycle","type":"related"},{"name":"sensitive to arsenite during vegetative growth","type":"exact"},{"name":"sensitive to arsenite ions","type":"exact"}],"termid":"FYPO:0005488"}


id: GO:0052335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of the symbiont cytoskeleton. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by host of symbiont cytoskeleton (obsolete GO:0052335)","termid":"GO:0052335"}


id: MONDO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrofrontofacionasal dysostosis (obsolete MONDO:0000717)","termid":"MONDO:0000717","xrefs":{"Monarch":{"xref_id":"0000717"}}}


id: GO:0070792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of Hulle cells over time, from their formation to the mature structures. Hulle cells are specialized multinucleate cells that originate from a nest-like aggregation of hyphae during sexual development and serve as nurse cells to the developing cleistothecium, or fruiting body.","definition_xrefs":["PMID:19210625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Hulle cell development","synonyms":[{"name":"Huelle cell development","type":"exact"},{"name":"Hulle cell formation","type":"narrow"}],"termid":"GO:0070792"}


id: PBO:0048700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxalase domain containing 4","termid":"PBO:0048700"}


id: FYPO:0008163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of nuclear foci are increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of nuclear foci","termid":"FYPO:0008163"}


id: PBO:0084100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanosine diphosphatase located in the Golgi; involved in the transport of GDP-mannose into the Golgi lumen, converting GDP to GMP after mannose is transferred to substrates; null mutants are defective in sporulation and pre-meiotic S phase entry; orthologous to human ENTPD6, a meiosis-associated non-obstructive azoospermia (NOA) related gene identified in GWAS studies","termid":"PBO:0084100"}


id: MONDO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloid neoplasm (obsolete MONDO:0000832)","termid":"MONDO:0000832","xrefs":{"Monarch":{"xref_id":"0000832"}}}


id: MONDO:0008859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"berry aneurysm, cirrhosis, pulmonary emphysema, and cerebral calcification","secondary_identifiers":["UMLS:C1859519","MESH:C565905","OMIM:210050","MEDGEN:347170"],"synonyms":[{"name":"berry aneurysm, cirrhosis, pulmonary emphysema, and cerebral calcification","type":"exact"},{"name":"cerebral aneurysm-cirrhosis syndrome","type":"related"}],"termid":"MONDO:0008859","xrefs":{"Monarch":{"xref_id":"0008859"}}}


id: PBO:0028499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ribosome_binding","termid":"PBO:0028499"}


id: GO:0061286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric capsule are generated and organized. The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule morphogenesis","termid":"GO:0072128"},{"relation_name":"part_of","term_name":"mesonephric capsule development","termid":"GO:0061285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule morphogenesis","termid":"GO:0061286"}


id: MONDO:0014001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Usher syndrome type 1 that has material basis in variation in the chromosome region 10p11.21-q21.1.","definition_xrefs":["DOID:0110837","PMID:22718019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 1","termid":"MONDO:0010168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 1K","secondary_identifiers":["UMLS:C3539124","OMIM:614990","MEDGEN:761332","ICD10CM:H35.5","GARD:15890"],"synonyms":[{"name":"USH1K","type":"exact"},{"name":"USHER syndrome, type IK","type":"related"},{"name":"Usher syndrome type IK","type":"exact"}],"termid":"MONDO:0014001","xrefs":{"Monarch":{"xref_id":"0014001"}}}


id: PBO:0073675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein delta","termid":"PBO:0073675"}


id: PBO:0039757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atherosclerotic plaque pathogenesis associated transcript","termid":"PBO:0039757"}


id: PBO:0039793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1","termid":"PBO:0039793"}


id: SO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The many tandem repeats (identical or related) of a short basic repeating unit; many have a base composition or other property different from the genome average that allows them to be separated from the bulk (main band) genomic DNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_repeat","termid":"SO:0000705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"satellite_DNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Satellite_DNA"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:satellite","type":"exact"},{"name":"satellite DNA","type":"exact"}],"termid":"SO:0000005"}


id: PBO:0062534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 3 pseudogene","termid":"PBO:0062534"}


id: PR:O13942
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.12c","synonyms":[{"name":"Spom972h-SPAC23H3.12c","type":"exact"}],"termid":"PR:O13942"}


id: GO:0140418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the modulation (either activation or suppression) of a host structure or process. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21467214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host process","termid":"GO:0044003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated perturbation of host process by symbiont","synonyms":[{"name":"effector mediated modulation of host process by symbiont","type":"exact"},{"name":"effector triggered modulation of host process by symbiont","type":"exact"},{"name":"effector-dependent modulation of host process by symbiont","type":"exact"},{"name":"effector-mediated modulation of host process by symbiont","type":"exact"}],"termid":"GO:0140418"}


id: PBO:0031231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylation","termid":"PBO:0031231"}


id: PBO:0077524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 238 like","termid":"PBO:0077524"}


id: PBO:0112645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAse P component","termid":"PBO:0112645"}


id: FYPO:0007682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly, exploratory movement, or disassembly of the Cdc42-containing cortical polarity patch is abnormal during mating.","definition_xrefs":["PMID:30279276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cortical polarity patch dynamics during mating","synonyms":[{"name":"abnormal cortical polarity patch dynamics during conjugation with cellular fusion","type":"exact"},{"name":"altered cortical polarity patch dynamics during mating","type":"exact"}],"termid":"FYPO:0007682"}


id: PBO:0057367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aj-1","termid":"PBO:0057367"}


id: RO:0002553
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is a hyperparasite of y iff x is a parasite of a parasite of the target organism y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_host","termid":"RO:0002454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparasite_of","synonyms":[{"name":"epiparasite of","type":"related"},{"name":"hyperparasitoid of","type":"related"}],"termid":"RO:0002553"}


id: FYPO:0007458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which nuclear pore localization to the portion of the nuclear envelope enclosing the mitotic nuclear bridge does not occur. The nuclear bridge is a narrow constricted region of the nucleus that forms around the mitotic spindle during anaphase. Normally, nuclear pores that lack baskets are found in the midzone of the nuclear bridge.","definition_xrefs":["GO:0140510","PMID:32848252","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear pore localization during mitosis","termid":"FYPO:0003783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear pore localization to mitotic nuclear bridge","synonyms":[{"name":"abolished NPC localization to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore complex localization to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore distribution to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore localisation to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore localization in nuclear envelope at mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore localization to mitotic nuclear bridge during mitotic cell cycle","type":"related"},{"name":"abolished nuclear pore localization to mitotic nuclear bridge during vegetative growth","type":"exact"},{"name":"abolished nuclear pore localization to mitotic nuclear bridge membrane domain","type":"exact"}],"termid":"FYPO:0007458"}


id: PR:P12000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA ligase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10459:SF10","OMA:SCHPO00562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.01","secondary_identifiers":["UniProtKB:P12000"],"synonyms":[{"name":"DNA ligase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LIG1","type":"exact"},{"name":"polydeoxyribonucleotide synthase [ATP] 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P12000"}


id: GO:0098945
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic active zone membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic active zone membrane (obsolete GO:0098945)","synonyms":[{"name":"intrinsic to presynaptic active zone membrane","type":"narrow"}],"termid":"GO:0098945"}


id: MONDO:0016341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal disease with restrictive cardiomyopathy (obsolete MONDO:0016341)","secondary_identifiers":["Orphanet:217638"],"termid":"MONDO:0016341","xrefs":{"Monarch":{"xref_id":"0016341"}}}


id: GO:0030538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the genitalia are generated and organized.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"},{"relation_name":"is_a","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic genitalia morphogenesis","synonyms":[{"name":"embryonic genital morphogenesis","type":"related"}],"termid":"GO:0030538"}


id: GO:1901094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein homotetramerization.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein homooligomerization","termid":"GO:0032463"},{"relation_name":"is_a","term_name":"negative regulation of protein tetramerization","termid":"GO:1901091"},{"relation_name":"is_a","term_name":"regulation of protein homotetramerization","termid":"GO:1901093"},{"relation_name":"negatively_regulates","term_name":"protein homotetramerization","termid":"GO:0051289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein homotetramerization","synonyms":[{"name":"down regulation of protein homotetramer assembly","type":"exact"},{"name":"down regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"down regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"down regulation of protein homotetramer formation","type":"exact"},{"name":"down regulation of protein homotetramerization","type":"exact"},{"name":"down-regulation of protein homotetramer assembly","type":"exact"},{"name":"down-regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"down-regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"down-regulation of protein homotetramer formation","type":"exact"},{"name":"down-regulation of protein homotetramerization","type":"exact"},{"name":"downregulation of protein homotetramer assembly","type":"exact"},{"name":"downregulation of protein homotetramer biosynthesis","type":"exact"},{"name":"downregulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"downregulation of protein homotetramer formation","type":"exact"},{"name":"downregulation of protein homotetramerization","type":"exact"},{"name":"inhibition of protein homotetramer assembly","type":"narrow"},{"name":"inhibition of protein homotetramer biosynthesis","type":"narrow"},{"name":"inhibition of protein homotetramer biosynthetic process","type":"narrow"},{"name":"inhibition of protein homotetramer formation","type":"narrow"},{"name":"inhibition of protein homotetramerization","type":"narrow"},{"name":"negative regulation of protein homotetramer assembly","type":"exact"},{"name":"negative regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"negative regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"negative regulation of protein homotetramer formation","type":"exact"}],"termid":"GO:1901094"}


id: GO:0043008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex using energy from ATP hydrolysis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ATP-dependent protein binding","termid":"GO:0043008"}


id: GO:0030178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Wnt signaling pathway.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"negatively_regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Wnt signaling pathway","secondary_identifiers":["GO:0045810"],"synonyms":[{"name":"down regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"down regulation of frizzled signaling pathway","type":"exact"},{"name":"down-regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"down-regulation of frizzled signaling pathway","type":"exact"},{"name":"downregulation of Wnt receptor signaling pathway","type":"exact"},{"name":"downregulation of frizzled signaling pathway","type":"exact"},{"name":"inhibition of Wnt receptor signaling pathway","type":"narrow"},{"name":"inhibition of frizzled signaling pathway","type":"narrow"},{"name":"negative regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"negative regulation of frizzled signaling pathway","type":"exact"},{"name":"negative regulation of frizzled signalling pathway","type":"exact"}],"termid":"GO:0030178"}


id: PBO:0042168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCM2 scaffold protein","termid":"PBO:0042168"}


id: MONDO:0012161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Susceptibility to respiratory infections associated with CD8 alpha chain mutation is a rare primary immunodeficiency due to a defect in adaptive immunity characterized by the absence of CD8+ T cells with normal immunoglobulin and specific antibody titres in blood and susceptibility to recurrent respiratory bacterial and viral infections. Symptom severity range from fatal respiratory insufficiency to mild or asymptomatic phenotypes.","definition_xrefs":["Orphanet:169085"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to respiratory infections associated with CD8alpha chain mutation","secondary_identifiers":["SCTID:766983005","NANDO:1200326","UMLS:C1837065","MEDGEN:323058","MESH:C563824","NANDO:2200699","OMIM:608957"],"synonyms":[{"name":"CD8 deficiency, familial","type":"related"},{"name":"familial CD8 deficiency","type":"exact"},{"name":"susceptibility to respiratory infections associated with CD8alpha chain mutation","type":"exact"}],"termid":"MONDO:0012161","xrefs":{"Monarch":{"xref_id":"0012161"}}}


id: SO:1001279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding stimulatory region, the stem-loop secondary structural element is downstream of the redefined region.","definition_xrefs":["SO:ke","PMID:12519954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_stem_loop_structure","synonyms":[{"name":"three prime stem loop structure","type":"exact"}],"termid":"SO:1001279"}


id: PBO:0055105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2523","termid":"PBO:0055105"}


id: PBO:0067380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 482, pseudogene","termid":"PBO:0067380"}


id: PBO:0077220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane BAX inhibitor motif containing 1","termid":"PBO:0077220"}


id: FYPO:0006712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetyl-CoA measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular acetyl-CoA level","synonyms":[{"name":"decreased cellular acetyl-CoA level during mitotic cell cycle","type":"related"},{"name":"decreased cellular acetyl-CoA level during vegetative growth","type":"exact"},{"name":"reduced cellular acetyl-CoA level","type":"exact"}],"termid":"FYPO:0006712"}


id: GO:1904183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of pyruvate dehydrogenase activity.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:25525879","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pyruvate dehydrogenase activity (obsolete GO:1904183)","synonyms":[{"name":"down regulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"down regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"down regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"down-regulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"down-regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"down-regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"downregulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"downregulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"downregulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"inhibition of pyruvate dehydrogenase activity","type":"narrow"},{"name":"inhibition of pyruvic acid dehydrogenase activity","type":"narrow"},{"name":"inhibition of pyruvic dehydrogenase activity","type":"narrow"},{"name":"negative regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"negative regulation of pyruvic dehydrogenase activity","type":"exact"}],"termid":"GO:1904183"}


id: PBO:0083554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene ECM1/YAL059W","termid":"PBO:0083554"}


id: GO:0060463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a lung lobe are generated and organized. A lung lobe is a projection that extends from the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"lung morphogenesis","termid":"GO:0060425"},{"relation_name":"part_of","term_name":"lung lobe development","termid":"GO:0060462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung lobe morphogenesis","termid":"GO:0060463"}


id: PBO:0046091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 2","termid":"PBO:0046091"}


id: PBO:0084867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S10 ribosomal protein; essential for viability, unlike most other mitoribosomal proteins","termid":"PBO:0084867"}


id: MONDO:0003935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare breast adenocarcinoma characterized by the presence of neoplastic oncocytic cells. The oncocytic cells comprise more than 70 percent of the malignant cellular population.","definition_xrefs":["NCIT:C40366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oncocytic breast carcinoma","secondary_identifiers":["UMLS:C1518574","DOID:6585","MEDGEN:309476"],"synonyms":[{"name":"oncocytic breast carcinoma","type":"exact"}],"termid":"MONDO:0003935","xrefs":{"Monarch":{"xref_id":"0003935"}}}


id: PBO:0062403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 26 pseudogene","termid":"PBO:0062403"}


id: PBO:0055931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37B pseudogene 1","termid":"PBO:0055931"}


id: GO:0031781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 melanocortin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 3 melanocortin receptor binding","synonyms":[{"name":"type 3 melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0031781"}


id: MONDO:0019940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrichosis-acromegaloid facial appearance syndrome (HAFF) is a very rare multiple congenital abnormality syndrome manifesting from birth with progressive hypertrichosis congenita terminalis (thick scalp hair extending onto the forehead with generalized increased body hair) associated with a typical acromegaloid facial appearance (thick eyebrows, prominent supraorbital ridges, broad nasal bridge, anteverted nares, long and large philtrum, and prominent mouth with full lips) appearing during childhood. HAFF seems to belong to a spectrum of phenotypes with the clinically overlapping acromegaloid facial appearance syndrome and hypertrichotic osteochondrodysplasia, CantC9 type.","definition_xrefs":["Orphanet:966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrichosis-acromegaloid facial appearance syndrome","secondary_identifiers":["GARD:502","SCTID:721837000"],"synonyms":[{"name":"acromegaloid facial appearance syndrome and hypertrichosis","type":"related"},{"name":"acromegaloid hypertrichosis syndrome","type":"related"},{"name":"haff","type":"exact"},{"name":"hypertrichosis-acromegaloid facial features syndrome","type":"exact"},{"name":"hypertrichosis-coarse face syndrome","type":"exact"}],"termid":"MONDO:0019940","xrefs":{"Monarch":{"xref_id":"0019940"}}}


id: PBO:0075948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 3 (pseudogene)","termid":"PBO:0075948"}


id: GO:0075237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of zoospore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of zoospore movement on or near host (obsolete GO:0075237)","termid":"GO:0075237"}


id: MONDO:0000655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete heavy chain disease (obsolete MONDO:0000655)","termid":"MONDO:0000655","xrefs":{"Monarch":{"xref_id":"0000655"}}}


id: PBO:0040839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell acute lymphoblastic leukemia expressed","termid":"PBO:0040839"}


id: PBO:0116393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mug2/mug135/meu2 family protein","termid":"PBO:0116393"}


id: FYPO:0008107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is decreased during stationary phase.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus","termid":"FYPO:0004455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus during stationary phase","termid":"FYPO:0008107"}


id: PBO:0028288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_S-phase_DNA_damage_checkpoint","termid":"PBO:0028288"}


id: PBO:0071891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 29","termid":"PBO:0071891"}


id: PBO:0000873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex epsilon subunit Cct5","termid":"PBO:0000873"}


id: PR:O13892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc1 gene.","definition_xrefs":["UniProtKB:O13892","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20G4.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.08","synonyms":[{"name":"Spom972h-pdc1","type":"exact"}],"termid":"PR:O13892"}


id: GO:0034760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of iron ions from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of iron ion transport","termid":"GO:0034757"},{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"iron ion transmembrane transport","termid":"GO:0034755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of iron ion transmembrane transport","synonyms":[{"name":"down regulation of transmembrane iron ion transport","type":"exact"},{"name":"down-regulation of transmembrane iron ion transport","type":"exact"},{"name":"downregulation of transmembrane iron ion transport","type":"exact"},{"name":"inhibition of transmembrane iron ion transport","type":"narrow"},{"name":"negative regulation of iron ion membrane transport","type":"exact"},{"name":"negative regulation of transmembrane iron ion transport","type":"exact"},{"name":"negative regulation of transmembrane iron transport","type":"exact"}],"termid":"GO:0034760"}


id: MONDO:0100138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mitochondrial myopathy caused by defects in the MICOS subunit gene APOO (MIC26). Modelling in yeast and flies demonstrate an inability to insert MICOS complex into the inner mitohondrial membrane. Associated symptoms include, lactic acidosis, cognitive impairment and autistic features.","definition_xrefs":["PMID:32439808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069","MONDO:0002320"],"is_obsolete":false,"name":"X-linked recessive mitochondrial myopathy","synonyms":[{"name":"X-linked recessive mitochondrial myopathy, lactic acidosis, cognitive impairment and autistic features","type":"exact"}],"termid":"MONDO:0100138","xrefs":{"Monarch":{"xref_id":"0100138"}}}


id: FYPO:0003407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of glyoxal than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to glyoxal","synonyms":[{"name":"resistance to GO","type":"broad"},{"name":"resistance to glyoxal during mitotic cell cycle","type":"related"},{"name":"resistance to glyoxal during vegetative growth","type":"exact"},{"name":"resistant to glyoxal","type":"exact"}],"termid":"FYPO:0003407"}


id: PBO:0079445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB like protein 3","termid":"PBO:0079445"}


id: PBO:0051921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 4","termid":"PBO:0051921"}


id: PR:Q9UUJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A COP9 signalosome complex subunit 7b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02077","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.12c","secondary_identifiers":["UniProtKB:Q9UUJ7"],"synonyms":[{"name":"Spom972h-COPS7B","type":"exact"}],"termid":"PR:Q9UUJ7"}


id: GO:0048361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur in the root epithelium; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root epithelial mucilage metabolic process","synonyms":[{"name":"root epithelial mucilage metabolism","type":"exact"}],"termid":"GO:0048361"}


id: GO:0005395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + eye pigment precursor(in) = ADP + phosphate + eye pigment precursor(out).","definition_xrefs":["TC:3.A.1.204.1"],"gene_count":0,"genotype_count":0,"name":"obsolete eye pigment precursor transporter activity (obsolete GO:0005395)","termid":"GO:0005395"}


id: GO:0061241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric nephron epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. The mesonephric nephron epithelium is a tissue that covers the surface of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"is_a","term_name":"mesonephric epithelium development","termid":"GO:0072163"},{"relation_name":"part_of","term_name":"mesonephric nephron development","termid":"GO:0061215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron epithelium development","termid":"GO:0061241"}


id: PBO:0029367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029367"}


id: GO:0006291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The excision of damaged DNA during pyrimidine-dimer repair. A large multienzyme complex scans the DNA for a distortion in the double helix rather than for a specific base change. Once a bulky lesion is found, the phosphodiester backbone of the abnormal strand is cleaved on both sides of the distortion, and the portion of the strand containing the lesion (an oligonucleotide) is peeled away from the DNA double helix by a DNA helicase enzyme.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine-dimer repair, DNA damage excision (obsolete GO:0006291)","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage excision","type":"exact"}],"termid":"GO:0006291"}


id: GO:0070547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an amino group from L-tyrosine to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete L-tyrosine aminotransferase activity (obsolete GO:0070547)","termid":"GO:0070547"}


id: GO:0070405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ammonium ions (NH4+).","definition_xrefs":["CHEBI:28938","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ammonium ion binding","synonyms":[{"name":"ammonium binding","type":"related"}],"termid":"GO:0070405"}


id: PBO:0027917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_growth_on_myriocin","termid":"PBO:0027917"}


id: GO:0003067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hormones modulate the force with which blood passes through the circulatory system contributing to different values of blood pressure oscillating with a regularity of approximately 24 hours. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"},{"relation_name":"part_of","term_name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure by hormone","termid":"GO:0003067"}


id: MONDO:0019605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of very rare glomerular diseases, composed of immunotactoid glomerulopathy (ITG) and non-amyloid fibrillary glomerulopathy (non-amyloid FGP), that are characterized by mesangial deposition of monoclonal microtubular or polyclonal fibrillar deposits. Both present clinically with nephrotic range proteinuria, hematuria and renal insufficiency leading to renal failure in many cases. ITG is more likely to manifest with underlying lymphoproliferative disease, hypocomplementemia, dysproteinemia, monoclonal gammopathy or occult cryoglobulinemia. Non-amyloid FGP is 10 times more frequent than ITG.","definition_xrefs":["Orphanet:91137"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"glomerular disorder","termid":"MONDO:0019722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"immunotactoid or fibrillary glomerulopathy","secondary_identifiers":["MEDGEN:1842578","UMLS:C5680195","GARD:12741"],"synonyms":[{"name":"Immunotactoid or fibrillary glomerulonephritis","type":"exact"},{"name":"fibrillary glomerulonephritis and immunotactoid glomerulopathy","type":"related"}],"termid":"MONDO:0019605","xrefs":{"Monarch":{"xref_id":"0019605"}}}


id: MONDO:0005852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the left atrioventricular mitral orifice.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve disorder","termid":"MONDO:0003767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"mitral valve stenosis","secondary_identifiers":["EFO:0007372","UMLS:C0026269","MESH:D008946","NANDO:1200963","NANDO:2200302","SCTID:79619009","DOID:1754","MEDGEN:44466","icd11.foundation:2115139779","NCIT:C50654"],"synonyms":[{"name":"mitral stenoses","type":"related"},{"name":"mitral stenosis","type":"exact"},{"name":"mitral valve stenoses","type":"related"},{"name":"stenoses, mitral","type":"related"},{"name":"stenoses, mitral valve","type":"related"},{"name":"stenosis, mitral","type":"related"},{"name":"stenosis, mitral valve","type":"related"},{"name":"valve stenoses, mitral","type":"related"},{"name":"valve stenosis, mitral","type":"related"}],"termid":"MONDO:0005852","xrefs":{"Monarch":{"xref_id":"0005852"}}}


id: GO:0003173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventriculo bulbo valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventriculo bulbo valve development","termid":"GO:0003173"}


id: PBO:0072429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 3","termid":"PBO:0072429"}


id: GO:0034050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes after interaction with a symbiont (defined as the smaller of two, or more, organisms engaged in symbiosis, a close interaction encompassing mutualism through parasitism). This can be triggered by direct interaction with the organism, for example, contact with penetrating hyphae of a fungus; or an indirect interaction such as symbiont-secreted molecules.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-induced defense-related programmed cell death","synonyms":[{"name":"host programmed cell death induced by symbiont","type":"exact"},{"name":"programmed cell death induced by symbiont","type":"exact"}],"termid":"GO:0034050"}


id: MONDO:0035735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired form of hemophilia A, resulting in spontaneous bleeding in individuals with no history of bleeding disorders. It is believed to be caused by spontaneous inhibition of clotting factor VIII by autoantibodies, and is usually associated with other autoimmune conditions.","definition_xrefs":["PMID:31632887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired hemophilia","termid":"MONDO:0019139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired hemophilia A","secondary_identifiers":["NCIT:C35345","MESH:C536392","GARD:6405","MEDGEN:124426","Orphanet:599480","UMLS:C0272325"],"synonyms":[{"name":"AHA","type":"exact"}],"termid":"MONDO:0035735","xrefs":{"Monarch":{"xref_id":"0035735"}}}


id: PBO:0048877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member C","termid":"PBO:0048877"}


id: GO:0002194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a hepatocyte during the development of the liver. Hepatocytes emerge from the hepatic epithelium, populating the septum transversum and lateral mesenchymal areas of the hepatic lobes.","definition_xrefs":["CL:0000182","PMID:9794819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte cell migration","termid":"GO:0002194"}


id: PBO:0076296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin repeat containing nuclear envelope protein 1","termid":"PBO:0076296"}


id: GO:2001120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methanofuran.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanofuran biosynthetic process","synonyms":[{"name":"methanofuran biosynthesis","type":"exact"}],"termid":"GO:2001120"}


id: PR:Q9UTC6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An iron-sulfur cluster assembly enzyme ISCU, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00204","PRO:DNx","PANTHER:PTHR10093:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron sulfur cluster assembly protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.13c","secondary_identifiers":["UniProtKB:Q9UTC6"],"synonyms":[{"name":"Spom972h-ISCU","type":"exact"},{"name":"iron sulfur cluster scaffold protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTC6"}


id: GO:0038076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in innate immune response (obsolete GO:0038076)","synonyms":[{"name":"MAP2K activity involved in innate immune response","type":"exact"},{"name":"MAPKK activity involved in innate immune response","type":"exact"}],"termid":"GO:0038076"}


id: GO:0006973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation of glycerol within a cell, for example by increased glycerol biosynthesis combined with decreased permeability of the cell membrane to glycerol, in response to the detection of a hyperosmotic environment.","definition_xrefs":["PMID:11752666","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"},{"relation_name":"part_of","term_name":"cellular hyperosmotic response","termid":"GO:0071474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular accumulation of glycerol","termid":"GO:0006973"}


id: PBO:0073196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectin P","termid":"PBO:0073196"}


id: GO:1905237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclosporin A stimulus.","definition_xrefs":["GO_REF:0000071","PMID:24914722","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclosporin A","synonyms":[{"name":"response to cyclophilin","type":"exact"}],"termid":"GO:1905237"}


