# terms

id: GO:0002188
data:
  {"annotated_genes":["SJAG_02628","SJAG_01487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103541,104792],"is_not":false,"summary":null,"term":"GO:0002188"}]},"cv_name":"biological_process","definition":"A gene-specific translational control mechanism where the small ribosomal subunit remains attached to the mRNA following termination of translation, then resumes scanning on the same mRNA molecule and initiates again at a downstream start site. Reinitiation depends on de novo recruitment of the ternary complex that is required to recognize the next AUG codon.","definition_xrefs":["PMID:18056426","PMID:18765792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01487":null,"SJAG_02628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translation reinitiation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002188","terms_by_termid":{"GO:0002188":null}}


id: MONDO:0016446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of cutis laxa that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutis laxa","termid":"MONDO:0016175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acquired cutis laxa","secondary_identifiers":["SCTID:19726003","Orphanet:228285","icd11.foundation:807277512","UMLS:C0406549","GARD:20586","MEDGEN:590500"],"synonyms":[{"name":"acquired cutis laxa","type":"exact"},{"name":"cutis laxa acquisita","type":"exact"}],"termid":"MONDO:0016446","xrefs":{"Monarch":{"xref_id":"0016446"}}}


id: GO:0047598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + NADP+ = 7-dehydrocholesterol + H+ + NADPH.","definition_xrefs":["RHEA:23984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"7-dehydrocholesterol reductase activity","secondary_identifiers":["Reactome:R-HSA-196402","EC:1.3.1.21","Reactome:R-HSA-6807055","MetaCyc:RXN66-323"],"synonyms":[{"name":"7-DHC reductase activity","type":"related"},{"name":"cholesterol:NADP+ delta7-oxidoreductase activity","type":"related"},{"name":"sterol Delta(7)-reductase activity","type":"broad"},{"name":"sterol delta7-reductase activity","type":"related"}],"termid":"GO:0047598"}


id: PBO:0005231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1941 family protein","termid":"PBO:0005231"}


id: PBO:0017568
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Walker-Warburg syndrome","termid":"PBO:0017568"}


id: GO:0075110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host receptor-mediated signal transduction (obsolete GO:0075110)","synonyms":[{"name":"positive regulation by symbiont of host receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075110"}


id: PBO:0058271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4649","termid":"PBO:0058271"}


id: PBO:0069325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 583, pseudogene","termid":"PBO:0069325"}


id: MONDO:0034819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare familial intestinal malformation characterized by failure of the rotation of the developing gastrointestinal tract around the superior mesenteric artery during embryonic development, resulting in a spectrum of abnormalities of intestinal position and fixation. Patients most typically present in the neonatal period with midgut volvulus, which can lead to short bowel syndrome or even death. Signs and symptoms include bilious vomiting, feeding intolerance, failure to thrive, constipation, bloody stools, or intermittent apnea. The condition may also manifest later in life with complications like kinking or hernias and a broad range of intestinal symptoms. It can be an isolated finding or occur in association with other anomalies.","definition_xrefs":["Orphanet:508410"],"gene_count":0,"genotype_count":0,"name":"obsolete familial intestinal malrotation (obsolete MONDO:0034819)","termid":"MONDO:0034819","xrefs":{"Monarch":{"xref_id":"0034819"}}}


id: PBO:0091315
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae TEM1","termid":"PBO:0091315"}


id: PBO:0052824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 90, pseudogene","termid":"PBO:0052824"}


id: GO:0034852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,4-dimethyl-3-oxopentanal + H2O = 4,4-dimethyl-3-oxopentanoate + 3 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,4-dimethyl-3-oxopentanal dehydrogenase activity (obsolete GO:0034852)","termid":"GO:0034852"}


id: GO:0090453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of aspartate into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate transmembrane transport","termid":"GO:0015810"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"vacuolar amino acid transmembrane transport","termid":"GO:0034487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"aspartate transmembrane import into vacuole","synonyms":[{"name":"vacuolar aspartate import","type":"exact"}],"termid":"GO:0090453"}


id: GO:1902728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of satellite cell proliferation; dependent on specific growth factor activity such as fibroblast growth factors and transforming growth factor beta.","definition_xrefs":["GO_REF:0000058","PMID:23212449","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle satellite cell proliferation","termid":"GO:1902724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth factor dependent skeletal muscle satellite cell proliferation","termid":"GO:1902728"}


id: PBO:0084788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; forms heterodimer complex with Mss1p that performs 5-carboxymethylaminomethyl modification of the wobble uridine base in mitochondrial tRNAs; required for respiration in paromomycin-resistant 15S rRNA mutants; human homolog MTO1 can complement yeast null mutant","termid":"PBO:0084788"}


id: PBO:0113450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of CPF cleavage and polyadenylation factor and E3 Ub-ligase; detects polyadenylation signal in nascent pre-mRNA and triggers 3' end formation of mRNA via cleavage and polyadenylation; binds pre-mRNA via zinc knuckle and RING finger; E3 ubiquitin ligase involved in polyubiquitination of endonuclease Ysh1p; contains a ubiquitin-like (UBL) domain, a RNA-binding zinc knuckle motif and a RING finger domain; relocalizes to cytosol in response to hypoxia; homolog of human RBBP6","termid":"PBO:0113450"}


id: MOD:01774
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-octanoyl-L-lysine.","definition_xrefs":["PubMed:2215217","RESID:AA0527","PubMed:12591875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanoylated residue","termid":"MOD:00666"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:01875"],"is_obsolete":false,"name":"N6-octanoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(octanoylamino)hexanoic acid","type":"exact"},{"name":"N(zeta)-octanoyllysine","type":"exact"},{"name":"N6-(1-oxooctyl)-L-lysine","type":"exact"},{"name":"N6-octanoyl-L-lysine","type":"exact"},{"name":"epsilon-octanoyllysine","type":"exact"}],"termid":"MOD:01774"}


id: GO:0032728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interferon-beta production.","definition_xrefs":["PMID:15546383","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of type I interferon production","termid":"GO:0032481"},{"relation_name":"is_a","term_name":"regulation of interferon-beta production","termid":"GO:0032648"},{"relation_name":"positively_regulates","term_name":"interferon-beta production","termid":"GO:0032608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interferon-beta production","secondary_identifiers":["GO:0045359","GO:0035549"],"synonyms":[{"name":"activation of interferon-beta production","type":"narrow"},{"name":"positive regulation of IFN-beta production","type":"exact"},{"name":"positive regulation of interferon-beta biosynthetic process","type":"narrow"},{"name":"positive regulation of interferon-beta secretion","type":"narrow"},{"name":"stimulation of interferon-beta production","type":"narrow"},{"name":"up regulation of interferon-beta production","type":"exact"},{"name":"up-regulation of interferon-beta production","type":"exact"},{"name":"upregulation of interferon-beta production","type":"exact"}],"termid":"GO:0032728"}


id: FYPO:0001979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which excised introns in lariat form (i.e. not linearized) are present at greater levels than normal.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased lariat intron level","synonyms":[{"name":"accumulation of lariat introns","type":"related"},{"name":"increased lariat intron level during mitotic cell cycle","type":"related"},{"name":"increased lariat intron level during vegetative growth","type":"exact"},{"name":"increased level of lariat introns","type":"exact"},{"name":"lariat intron accumulation","type":"related"}],"termid":"FYPO:0001979"}


id: PBO:0110204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single stranded DNA specific 5'-3' exodeoxyribonuclease Exo5.2","termid":"PBO:0110204"}


id: PBO:0018286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMP deaminase family/ methyltransferase bifunctional enzyme involved in riboflavin biosynthesis and tRNA pseudouridine biosynthesis Rib2 (predicted)","termid":"PBO:0018286"}


id: PBO:0057027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-3","termid":"PBO:0057027"}


id: MONDO:0700025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 20 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 disorder","termid":"MONDO:0700025","xrefs":{"Monarch":{"xref_id":"0700025"}}}


id: FYPO:0007339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which of RNAs transcribed from dg repeats in the centromere outer repeat region are present at higher levels than normal.","definition_xrefs":["PMID:18957202","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric outer repeat transcript level","termid":"FYPO:0000220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased cen-dg RNA level","synonyms":[{"name":"increased cen-dg RNA accumulation","type":"related"},{"name":"increased cen-dg RNA level during mitotic cell cycle","type":"related"},{"name":"increased cen-dg RNA level during vegetative growth","type":"exact"},{"name":"increased cen-dg transcript level","type":"exact"},{"name":"increased level of cen-dg RNA","type":"exact"},{"name":"increased level of cen-dg transcripts","type":"exact"},{"name":"increased level of centromeric dg repeat RNA","type":"exact"},{"name":"increased level of centromeric dg repeat transcripts","type":"exact"}],"termid":"FYPO:0007339"}


id: PBO:0008966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIb-related protein (predicted)","termid":"PBO:0008966"}


id: MONDO:0018221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immune hydrops fetalis (IHF), a form of HF, describes the excessive accumulation of fetal fluid within the fetal extravascular compartments and body cavities due to maternal rhesus (Rh) incompatibility.","definition_xrefs":["Orphanet:364013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrops fetalis","termid":"MONDO:0015193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune hydrops fetalis","secondary_identifiers":["MEDGEN:105328","UMLS:C0455990","GARD:21561","ICD9:773.3","NCIT:C111904","SCTID:15539009","icd11.foundation:1589938690"],"synonyms":[{"name":"IHF","type":"exact"},{"name":"immune HF","type":"exact"},{"name":"immune fetal edema","type":"exact"},{"name":"immune fetal hydrops","type":"exact"},{"name":"immune foetal hydrops","type":"exact"},{"name":"immune foetal oedema","type":"exact"}],"termid":"MONDO:0018221","xrefs":{"Monarch":{"xref_id":"0018221"}}}


id: GO:0051731
data:
  {"annotated_genes":["SJAG_02680","SJAG_01979","SJAG_01791","SJAG_00956","SJAG_03789"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117996],"is_not":false,"summary":null,"term":"GO:0051731"},{"annotations":[93206,87645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046404"},{"annotations":[92970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051736"},{"annotations":[90161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051730"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NTP + 5'-dephosphopolynucleotide = NDP + 5'-phosphopolynucleotide. The polynucleotide may be DNA or RNA.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00956":null,"SJAG_01791":null,"SJAG_01979":null,"SJAG_02680":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"polynucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5'-dephosphopolynucleotide kinase activity","type":"exact"},{"name":"5'-hydroxyl polynucleotide kinase activity","type":"exact"},{"name":"PNK","type":"related"},{"name":"polynucleotide 5'-hydroxy-kinase activity","type":"exact"},{"name":"polynucleotide 5'-hydroxyl kinase (phosphorylating) activity","type":"exact"},{"name":"polynucleotide kinase activity","type":"broad"}],"termid":"GO:0051731","terms_by_termid":{"GO:0046404":null,"GO:0051730":null,"GO:0051731":null,"GO:0051736":null}}


id: MONDO:0001314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute episode of pain, swelling, and redness, sometimes associated with fever. It is caused by the deposition of calcium pyrophosphate crystals in the joints.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"},{"relation_name":"is_a","term_name":"metabolic bone disorder","termid":"MONDO:0800486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"chondrocalcinosis","secondary_identifiers":["ICD9:275.49","MESH:D002805","NCIT:C34955","HP:0000934","icd11.foundation:2041797033","ICD9:712.1","SCTID:239832006","UMLS:C0553730","DOID:1156","MEDGEN:154303"],"synonyms":[{"name":"calcium pyrophosphate deposition disease","type":"exact"},{"name":"pseudogout","type":"exact"}],"termid":"MONDO:0001314","xrefs":{"Monarch":{"xref_id":"0001314"}}}


id: GO:0120132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process in the bone marrow.","definition_xrefs":["PMID:27908889","GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of apoptotic process in bone marrow cell","termid":"GO:0071865"},{"relation_name":"positively_regulates","term_name":"apoptotic process in bone marrow cell","termid":"GO:0071839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process in bone marrow cell","synonyms":[{"name":"activation of apoptosis in bone marrow","type":"narrow"},{"name":"positive regulation of apoptosis in bone marrow","type":"narrow"},{"name":"positive regulation of apoptotic process in bone marrow","type":"exact"},{"name":"positive regulation of bone marrow cell apoptosis","type":"exact"},{"name":"positive regulation of bone marrow cell programmed cell death by apoptosis","type":"exact"},{"name":"positive regulation of killing of bone marrow cells","type":"exact"},{"name":"positive regulation of programmed cell death of bone marrow cells by apoptosis","type":"exact"},{"name":"positive regulation of programmed cell death, bone marrow cells","type":"exact"},{"name":"up regulation of apoptosis in bone marrow","type":"exact"},{"name":"up-regulation of apoptosis in bone marrow","type":"exact"},{"name":"upregulation of apoptosis in bone marrow","type":"exact"}],"termid":"GO:0120132"}


id: PBO:0046854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 2B, pseudogene","termid":"PBO:0046854"}


id: GO:0018410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The alteration of the C-terminal amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein amino acid modification","synonyms":[{"name":"peptide or protein carboxyl-terminal blocking","type":"related"},{"name":"peptide/protein carboxyl-terminal blocking","type":"related"}],"termid":"GO:0018410"}


id: FYPO:0007834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is altered such that more of the protein is present at the 3' end, and less at the 5' end, than normal.","definition_xrefs":["PMID:31837996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes","synonyms":[{"name":"decreased protein localization to chromatin at 5' end of RNA polymerase II-transcribed genes with increased localization towards 3' end","type":"exact"},{"name":"protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes during vegetative growth","type":"exact"}],"termid":"FYPO:0007834"}


id: PBO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNS1/SUR4 family protein (predicted)","termid":"PBO:0000242"}


id: GO:0048303
data:
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id: PBO:0011083
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id: GO:0002181
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id: GO:0102289
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id: MONDO:0020944
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id: MONDO:0006484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic ductal proliferative lesion of the breast characterized by the formation of secondary lumens and prominent intraductal proliferation of a heterogeneous cellular population that may include epithelial cells, myoepithelial cells, or metaplastic apocrine cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast intraductal proliferative lesion","termid":"MONDO:0004007"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"usual ductal breast hyperplasia","secondary_identifiers":["NCIT:C27941","ICD9:611.89","EFO:1000612","SCTID:472905007","UMLS:C3532429","MEDGEN:759542"],"synonyms":[{"name":"UDH","type":"exact"},{"name":"ductal breast hyperplasia of usual type","type":"exact"},{"name":"ordinary intraductal breast hyperplasia","type":"exact"}],"termid":"MONDO:0006484","xrefs":{"Monarch":{"xref_id":"0006484"}}}


id: PBO:0085132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein involved in the early steps of 35S rRNA processing; interacts with Faf1p; member of a transcriptionally co-regulated set of genes called the RRB regulon; essential gene","termid":"PBO:0085132"}


id: PBO:0077379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 120B","termid":"PBO:0077379"}


id: PBO:0087343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spermine synthase; required for the biosynthesis of spermine and also involved in biosynthesis of pantothenic acid","termid":"PBO:0087343"}


id: GO:0098901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"}


id: PR:O94313
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbamoyl-phosphate synthase [ammonia], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase arginine-specific large chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.08c","secondary_identifiers":["UniProtKB:O94313"],"synonyms":[{"name":"Spom972h-CPS1","type":"exact"},{"name":"arginine-specific carbamoyl-phosphate synthetase, ammonia chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94313"}


id: PATO:0001012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001012 relative intensity value (obsolete PATO:0001012)","termid":"PATO:0001012"}


id: PBO:0116306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein based on available experimental and comparative sequence data","termid":"PBO:0116306"}


id: PBO:0018076
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DCP1A","termid":"PBO:0018076"}


id: MONDO:0700128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Down syndrome in which the extra (partial or total) copy of chromosome 21 genetic material is attached to another chromosome.","definition_xrefs":["PMID:29218069","PMID:20691415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Down syndrome","termid":"MONDO:0008608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation Down syndrome","secondary_identifiers":["MEDGEN:693553","UMLS:C1269751"],"synonyms":[{"name":"Robertsonian Translocation Trisomy 21","type":"narrow"}],"termid":"MONDO:0700128","xrefs":{"Monarch":{"xref_id":"0700128"}}}


id: PBO:0009930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peloto ortholog (predicted)","termid":"PBO:0009930"}


id: PBO:0040193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 6","termid":"PBO:0040193"}


id: PBO:0083541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YLR201C; ORF contains a putative intron","termid":"PBO:0083541"}


id: GO:0044461
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the bacterial-type flagellum, a 20 nm diameter filament composed of subunits of flagellin driven passively at its base by a motor powered by a transmembrane ion potential, typically a proton or sodium potential.","definition_xrefs":["GOC:mtg_sensu","PMID:10572114","PMID:12624192","PMID:25251856","GOC:jl","DOI:10.1002/9780470015902.a0000744.pub4","GOC:cilia"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial-type flagellum part (obsolete GO:0044461)","synonyms":[{"name":"flagellin-based flagellum part","type":"exact"}],"termid":"GO:0044461"}


id: GO:1904412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac ventricle development.","definition_xrefs":["GOC:TermGenie","PMID:19590510","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac ventricle development","termid":"GO:1904412"}


id: MONDO:0013789
data:
  {"annotated_genes":["SJAG_01069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85955],"is_not":false,"summary":null,"term":"MONDO:0013789"}]},"cv_name":"mondo","definition":"DDOST-CDG is a form of congenital disorders of N-linked glycosylation characterized by failure to thrive, developmental delay, hypotonia, strabismus and hepatic dysfunction. The disease is caused by mutations in the gene DDOST (1p36.1).","definition_xrefs":["Orphanet:300536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"DDOST-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12398","OMIM:614507","DOID:0080569","SCTID:733083006","UMLS:C3281084","MEDGEN:482714"],"synonyms":[{"name":"CDG syndrome type Ir","type":"exact"},{"name":"CDG-Ir","type":"exact"},{"name":"CDG1R","type":"exact"},{"name":"DDOST-CDG","type":"exact"},{"name":"DDOST-CDG (CDG-Ir)","type":"related"},{"name":"DDOST-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type Ir","type":"exact"},{"name":"congenital disorder of glycosylation type 1r","type":"exact"},{"name":"congenital disorder of glycosylation type Ir","type":"exact"},{"name":"congenital disorder of glycosylation, type Ir","type":"related"}],"termid":"MONDO:0013789","terms_by_termid":{"MONDO:0013789":null},"xrefs":{"Monarch":{"xref_id":"0013789"}}}


id: GO:0036509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of an alpha-1,2-linked mannose from the B-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["GOC:bf","PMID:22160784","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete trimming of terminal mannose on B branch (obsolete GO:0036509)","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8B(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8B","type":"related"},{"name":"glycoprotein mannose trimming on B branch","type":"exact"}],"termid":"GO:0036509"}


id: MONDO:0017152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension associated with congenital heart disease (PAH-CHD) is a form of pulmonary arterial hypertension (PAH), characterized by elevated pulmonary arterial resistance leading to right heart failure occurring as a common complication of congenital heart malformations with left to right cardiac shunts. Eisenmenger syndrome is the most advanced form of PAH-CHD and is defined as the complete or partial reversal of an initial left-to-right shunt to a right-to-left shunt, causing cyanosis and limited exercise capacity. PAH-CHD also includes mild to moderate systemic-to-pulmonary shunts with no cyanosis at rest, patients with small defects, and those with residual PAH following corrective cardiac surgery.","definition_xrefs":["Orphanet:275803"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with congenital heart disease (obsolete MONDO:0017152)","secondary_identifiers":["ICD9:416.8","SCTID:697905000"],"synonyms":[{"name":"PAH associated with congenital heart disease","type":"exact"}],"termid":"MONDO:0017152","xrefs":{"Monarch":{"xref_id":"0017152"}}}


id: GO:0071942
data:
  {"annotated_genes":["SJAG_01049","SJAG_01887"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87802,116585],"is_not":false,"summary":null,"term":"GO:0071942"}]},"cv_name":"cellular_component","definition":"A nucleotide-excision repair complex that is involved in damage sensing during global genome nucleotide excision repair (GG-NER). It is part of the pre-incision (or initial recognition) complex bound to sites of DNA damage. In human, it is composed of XPC, RAD23B and CETN2.","definition_xrefs":["PMID:19941824","PMID:15964821","PMID:11279143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"XPC complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071942","terms_by_termid":{"GO:0071942":null}}


id: PBO:0089008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VI","termid":"PBO:0089008"}


id: PBO:0004366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKC subfamily","termid":"PBO:0004366"}


id: GO:0075303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of frequency, rate or extent of basidiospore formation, a process in which a sexually produced fungal spore is formed on a basidium in the fungi basidiomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"regulation of basidiospore formation","termid":"GO:0075302"},{"relation_name":"positively_regulates","term_name":"basidiospore formation","termid":"GO:0034295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of basidiospore formation","termid":"GO:0075303"}


id: FYPO:0006259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the length of the mitotic spindle is normal (i.e. indistinguishable from wild type) during metaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic spindle morphology","termid":"FYPO:0007106"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle length during metaphase","synonyms":[{"name":"normal mitotic spindle length during metaphase during vegetative growth","type":"exact"},{"name":"normal spindle length during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal spindle length during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006259"}


id: PBO:0084546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the Puf family of RNA-binding proteins; interacts with mRNAs encoding membrane-associated proteins; involved in localizing the Arp2/3 complex to mitochondria; overexpression causes increased sensitivity to benomyl; JSN1 has a paralog, PUF2, that arose from the whole genome duplication","termid":"PBO:0084546"}


id: MONDO:0017867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal 17p13.1 microdeletion syndrome is a rare chromosomal anomaly syndrome characterized by mild global developmental delay/intellectual disability with poor to absent speech, dysmorphic features (long midface, retrognathia with overbite, protruding ears), microcephaly, failure to thrive, wide-based gait and a body posture with knee and elbow flexion and hands held in a midline.","definition_xrefs":["Orphanet:319171"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"chromosome 17p13.1 deletion syndrome","termid":"MONDO:0013415"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal 17p13.1 microdeletion syndrome","secondary_identifiers":["GARD:10996","MEDGEN:1657963","UMLS:C4749349"],"synonyms":[{"name":"distal del(17)(p13.1)","type":"exact"}],"termid":"MONDO:0017867","xrefs":{"Monarch":{"xref_id":"0017867"}}}


id: PR:Q9USM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16A11.15c gene.","definition_xrefs":["UniProtKB:Q9USM2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16A11.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.15c","synonyms":[{"name":"Spom972h-SPCC16A11.15c","type":"exact"}],"termid":"PR:Q9USM2"}


id: PBO:0049639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 42","termid":"PBO:0049639"}


id: MONDO:0001771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urethral stricture","termid":"MONDO:0002127"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infective urethral stricture","secondary_identifiers":["ICD9:136.9","ICD9:598.00","MEDGEN:588592","SCTID:80375002","ICD9:598.01","UMLS:C0403696","DOID:13658"],"termid":"MONDO:0001771","xrefs":{"Monarch":{"xref_id":"0001771"}}}


id: FYECO:0000110
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are first grown in minimal medium lacking nitrogen and are then allowed to recover in rich medium.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen starvation and recovery","synonyms":[{"name":"recovery from nitrogen depletion","type":"exact"},{"name":"recovery from nitrogen starvation","type":"exact"}],"termid":"FYECO:0000110"}


id: PBO:0055094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2512","termid":"PBO:0055094"}


id: MONDO:0010694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus, myoclonic","secondary_identifiers":["MESH:C564088","MEDGEN:326918","OMIM:310800","UMLS:C1839579"],"synonyms":[{"name":"myoclonic nystagmus","type":"related"},{"name":"nystagmus, myoclonic","type":"exact"}],"termid":"MONDO:0010694","xrefs":{"Monarch":{"xref_id":"0010694"}}}


id: MONDO:0003010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of renal cell carcinoma. It is a well-circumscribed multicystic mass without solid areas. The inner lining of the cystic structures is composed of clear cells.","definition_xrefs":["NCIT:C4524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell renal carcinoma","termid":"MONDO:0005005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"multilocular clear cell renal cell carcinoma","secondary_identifiers":["ICDO:8316/3","GARD:21417","DOID:4463","ICD9:189.0","UMLS:C0346249","SCTID:254916002","Orphanet:319287","MEDGEN:87547"],"synonyms":[{"name":"MCRCC","type":"exact"},{"name":"cystadenocarcinoma of kidney","type":"exact"},{"name":"multilocular clear cell adenocarcinoma","type":"exact"},{"name":"multilocular clear cell carcinoma","type":"exact"},{"name":"multilocular clear cell renal cell adenocarcinoma","type":"exact"},{"name":"multilocular clear cell renal cell carcinoma","type":"exact"},{"name":"multilocular cystic clear cell renal cell neoplasm of low malignant potential","type":"exact"},{"name":"multilocular cystic renal cell adenocarcinoma","type":"exact"},{"name":"multilocular cystic renal cell cancer","type":"exact"},{"name":"multilocular cystic renal cell carcinoma","type":"exact"},{"name":"multilocular cystic renal neoplasm of low malignant potential","type":"related"},{"name":"renal cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0003010","xrefs":{"Monarch":{"xref_id":"0003010"}}}


id: PBO:0060951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFIL3 like basic leucine zipper","termid":"PBO:0060951"}


id: PBO:0005526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn6 (predicted)","termid":"PBO:0005526"}


id: MONDO:1010534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gingival hypertrophy that occurs in red fox.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival hypertrophy, non-human animal","termid":"MONDO:1010038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival hypertrophy, red fox","secondary_identifiers":["OMIA:000409-9627"],"termid":"MONDO:1010534","xrefs":{"Monarch":{"xref_id":"1010534"}}}


id: GO:0140492
data:
  {"annotated_genes":["SJAG_00546","SJAG_03429","SJAG_00742","SJAG_01312","SJAG_00573","SJAG_01281","SJAG_03752","SJAG_02244","SJAG_04215","SJAG_00795","SJAG_02419","SJAG_02900","SJAG_00764","SJAG_03686","SJAG_04651","SJAG_01528","SJAG_02341"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88009,91150,93646,94802,95902,96046,99367,104095,105108,105274,109792,111214,113066,114259,114613,114685,115399],"is_not":false,"summary":null,"term":"GO:0140492"}]},"cv_name":"molecular_function","definition":"An metal-dependent isopeptidase activity that cleaves ubiquitin from a target protein to which it is conjugated.","definition_xrefs":["PMID:19489724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallopeptidase activity","termid":"GO:0008237"},{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00546":null,"SJAG_00573":null,"SJAG_00742":null,"SJAG_00764":null,"SJAG_00795":null,"SJAG_01281":null,"SJAG_01312":null,"SJAG_01528":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02900":null,"SJAG_03429":null,"SJAG_03686":null,"SJAG_03752":null,"SJAG_04215":null,"SJAG_04651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0008233","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"metal-dependent deubiquitinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"metal-dependent ubiquitin-like hydrolase activity","type":"exact"},{"name":"metal-dependent ubiquitinyl-like hydrolase activity","type":"exact"}],"termid":"GO:0140492","terms_by_termid":{"GO:0140492":null}}


id: MONDO:0017389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetrahydrobiopterin-responsive hyperphenylalaninemia/ phenylketonuria (BH4-responsive hyperphenylalaninemia/ phenylketonuria) is a form of phenylketonuria (PKU), an inborn error of amino acid metabolism, characterized by mild to moderate symptoms of PKU including impaired cognitive function, seizures, and behavioral and developmental disorders, and a marked reduction and normalization of elevated phenylalanine concentrations after oral loading with tetrahydrobiopterin (BH4; sapropterin dihydrochloride), an essential cofactor of phenylalanine hydroxylase.","definition_xrefs":["Orphanet:293284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"tetrahydrobiopterin-responsive hyperphenylalaninemia/phenylketonuria","secondary_identifiers":["GARD:21166","MEDGEN:1842546","NANDO:1200787","NANDO:2201077","UMLS:C5679945"],"synonyms":[{"name":"BH4-responsive HPA/PKU","type":"exact"},{"name":"BH4-responsive hyperphenylalaninemia/phenylketonuria","type":"exact"},{"name":"tetrahydrobiopterin-responsive HPA/PKU","type":"exact"}],"termid":"MONDO:0017389","xrefs":{"Monarch":{"xref_id":"0017389"}}}


id: PBO:0077008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 10","termid":"PBO:0077008"}


id: PBO:0057752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1911","termid":"PBO:0057752"}


id: MONDO:0010941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nocturnal enuresis where the child has been dry for at least 6 months but enuresis has recurred.","direct_ancestors":[{"relation_name":"is_a","term_name":"nocturnal enuresis","termid":"MONDO:0000022"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nocturnal enuresis, 2","secondary_identifiers":["MEDGEN:331473","UMLS:C1833268","MESH:C563439","OMIM:600808"],"synonyms":[{"name":"ENUR2","type":"related"},{"name":"enuresis, nocturnal, 2","type":"related"}],"termid":"MONDO:0010941","xrefs":{"Monarch":{"xref_id":"0010941"}}}


id: PBO:0053759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1001","termid":"PBO:0053759"}


id: GO:1905707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial ATP synthesis coupled proton transport.","definition_xrefs":["GOC:TermGenie","PMID:12809520","PMID:15294286","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial ATP synthesis coupled proton transport","termid":"GO:1905706"},{"relation_name":"is_a","term_name":"negative regulation of ATP biosynthetic process","termid":"GO:2001170"},{"relation_name":"negatively_regulates","term_name":"proton motive force-driven mitochondrial ATP synthesis","termid":"GO:0042776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial ATP synthesis coupled proton transport","termid":"GO:1905707"}


id: SO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Plastid rRNA is an RNA component of the small or large subunits of plastid (such as chloroplast) ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA","termid":"SO:0000252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_rRNA","synonyms":[{"name":"plastid rRNA","type":"exact"}],"termid":"SO:0002346"}


id: PBO:0054110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1475","termid":"PBO:0054110"}


id: MONDO:0001731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the vagina and is characterized by the presence of benign epithelial and benign mesenchymal elements.","definition_xrefs":["NCIT:C40275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign vaginal neoplasm","termid":"MONDO:0000647"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign vaginal mixed epithelial and mesenchymal neoplasm","secondary_identifiers":["DOID:135","MEDGEN:267349","UMLS:C1511106"],"synonyms":[{"name":"benign vaginal carcinosarcoma","type":"related"},{"name":"benign vaginal mixed epithelial and mesenchymal neoplasm","type":"exact"},{"name":"benign vaginal mixed epithelial and mesenchymal tumor","type":"exact"},{"name":"benign vaginal mixed epithelial and mesenchymal tumour","type":"exact"}],"termid":"MONDO:0001731","xrefs":{"Monarch":{"xref_id":"0001731"}}}


id: PBO:0081707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 627","termid":"PBO:0081707"}


id: PBO:0057128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 211","termid":"PBO:0057128"}


id: PBO:0084528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the lipid-translocating exporter (LTE) family; present in multiple copies associated with SUC telomeric loci, amplified in yeasts used for industrial biomass or ethanol production with molasses as substrate","termid":"PBO:0084528"}


id: PBO:0090207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex subunit Sfc9","termid":"PBO:0090207"}


id: MONDO:0033047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Perrault syndrome","termid":"MONDO:0017312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005047","MONDO:0005066","MONDO:0006025","MONDO:0004069"],"is_obsolete":false,"name":"Perrault syndrome 6","secondary_identifiers":["GARD:16237","OMIM:617565","DOID:0080256","MEDGEN:1391447","UMLS:C4479656"],"synonyms":[{"name":"PRLTS6","type":"related"},{"name":"Perrault syndrome 6","type":"exact"}],"termid":"MONDO:0033047","xrefs":{"Monarch":{"xref_id":"0033047"}}}


id: PBO:0071040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 42","termid":"PBO:0071040"}


id: PBO:0054919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2333","termid":"PBO:0054919"}


id: MONDO:1011015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebellar degeneration that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"cerebellar degeneration, non-human animal","termid":"MONDO:1010243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar degeneration, chicken","secondary_identifiers":["OMIA:001221-9031"],"termid":"MONDO:1011015","xrefs":{"Monarch":{"xref_id":"1011015"}}}


id: PBO:0036323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get3 (predicted)","termid":"PBO:0036323"}


id: PBO:0049408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 1 soluble subunit alpha 1","termid":"PBO:0049408"}


id: GO:1901305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of spermidine biosynthetic process","termid":"GO:1901304"},{"relation_name":"negatively_regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spermidine biosynthetic process","synonyms":[{"name":"down regulation of spermidine anabolism","type":"exact"},{"name":"down regulation of spermidine biosynthesis","type":"exact"},{"name":"down regulation of spermidine biosynthetic process","type":"exact"},{"name":"down regulation of spermidine formation","type":"exact"},{"name":"down regulation of spermidine synthesis","type":"exact"},{"name":"down-regulation of spermidine anabolism","type":"exact"},{"name":"down-regulation of spermidine biosynthesis","type":"exact"},{"name":"down-regulation of spermidine biosynthetic process","type":"exact"},{"name":"down-regulation of spermidine formation","type":"exact"},{"name":"down-regulation of spermidine synthesis","type":"exact"},{"name":"downregulation of spermidine anabolism","type":"exact"},{"name":"downregulation of spermidine biosynthesis","type":"exact"},{"name":"downregulation of spermidine biosynthetic process","type":"exact"},{"name":"downregulation of spermidine formation","type":"exact"},{"name":"downregulation of spermidine synthesis","type":"exact"},{"name":"inhibition of spermidine anabolism","type":"exact"},{"name":"inhibition of spermidine biosynthesis","type":"exact"},{"name":"inhibition of spermidine biosynthetic process","type":"narrow"},{"name":"inhibition of spermidine formation","type":"exact"},{"name":"inhibition of spermidine synthesis","type":"exact"},{"name":"negative regulation of spermidine anabolism","type":"exact"},{"name":"negative regulation of spermidine biosynthesis","type":"exact"},{"name":"negative regulation of spermidine formation","type":"exact"},{"name":"negative regulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901305"}


id: GO:2000382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of mesoderm development","termid":"GO:2000380"},{"relation_name":"positively_regulates","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesoderm development","termid":"GO:2000382"}


id: PBO:0034800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress associated Endoplasmic Reticulum protein Tam14","termid":"PBO:0034800"}


id: MOD:00562
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:12766232","Unimod:212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d5","synonyms":[{"name":"N-ethyl iodoacetamide-d5","type":"related"},{"name":"NEIAA:2H(5)","type":"related"}],"termid":"MOD:00562"}


id: MONDO:0044250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tongue curling, folding, or rolling (obsolete MONDO:0044250)","secondary_identifiers":["OMIM:189300"],"synonyms":[{"name":"cloverleaf tongue","type":"related"},{"name":"tongue curling, folding, or rolling","type":"related"},{"name":"trefoil tongue","type":"related"}],"termid":"MONDO:0044250","xrefs":{"Monarch":{"xref_id":"0044250"}}}


id: PBO:0030145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_leptomycin_B","termid":"PBO:0030145"}


id: GO:0052480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont jasmonic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway (obsolete GO:0052480)","synonyms":[{"name":"negative regulation by organism of defense-related symbiont JA-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052480"}


id: GO:0019103
data:
  {"annotated_genes":["SJAG_03453","SJAG_02370","SJAG_02288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87253,90365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002135"},{"annotations":[91186,90371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002134"}]},"cv_name":"molecular_function","definition":"Binding to a pyrimidine nucleotide, a pyrimidine nucleoside esterified with (ortho)phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02288":null,"SJAG_02370":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyrimidine nucleotide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019103","terms_by_termid":{"GO:0002134":null,"GO:0002135":null}}


id: GO:0090060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of metaxylem development. Metaxylem development is the process whose specific outcome is the progression of the metaxylem over time, from its formation to the mature structure. The metaxylem is the part of the primary xylem that differentiates after the protoxylem and before the secondary xylem, if any of the latter is formed.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"metaxylem development","termid":"GO:0090058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metaxylem development","termid":"GO:0090060"}


id: PBO:0069662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 939, pseudogene","termid":"PBO:0069662"}


id: PBO:0049746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box transcription factor 1","termid":"PBO:0049746"}


id: MONDO:0016910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cytogenetic abnormality that refers to the allelic loss of all or part of the long arm of chromosome 11.","definition_xrefs":["NCIT:C37312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 11","termid":"MONDO:0016876"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 11","secondary_identifiers":["GTR:AN0100480","UMLS:C2931804","GARD:20831","GTR:AN0100478","icd11.foundation:237602200","MESH:C538296","MEDGEN:419905","Orphanet:262092","GTR:AN0100479"],"synonyms":[{"name":"11q deletion","type":"related"},{"name":"11q monosomy","type":"related"},{"name":"Deletion 11q partial","type":"related"},{"name":"chromosome 11q deletion","type":"related"},{"name":"chromosome 11q partial deletion","type":"related"},{"name":"del(11q)","type":"related"},{"name":"deletion 11q","type":"related"},{"name":"loss of chromosome 11q","type":"related"},{"name":"monosomy 11q","type":"related"},{"name":"monosomy 11q partial","type":"related"},{"name":"partial deletion of chromosome 11q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 11","type":"exact"},{"name":"partial monosomy 11q","type":"related"},{"name":"partial monosomy of chromosome 11q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 11","type":"exact"}],"termid":"MONDO:0016910","xrefs":{"Monarch":{"xref_id":"0016910"}}}


id: GO:1902567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eosinophil activation.","definition_xrefs":["GOC:TermGenie","PMID:16254138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of eosinophil activation","termid":"GO:1902566"},{"relation_name":"negatively_regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil activation","synonyms":[{"name":"down regulation of eosinophil activation","type":"exact"},{"name":"down-regulation of eosinophil activation","type":"exact"},{"name":"downregulation of eosinophil activation","type":"exact"},{"name":"inhibition of eosinophil activation","type":"narrow"}],"termid":"GO:1902567"}


id: GO:0060864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals that increases the rate or extent of floral organ abscission.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of floral organ abscission by small GTPase mediated signal transduction (obsolete GO:0060864)","termid":"GO:0060864"}


id: PBO:0043651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8 pseudogene 1","termid":"PBO:0043651"}


id: PBO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-P subunit (predicted)","termid":"PBO:0000821"}


id: MONDO:0018257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of syringomyelia that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary syringomyelia","termid":"MONDO:0020508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial syringomyelia","secondary_identifiers":["MEDGEN:1842994","GARD:21589","Orphanet:370034","UMLS:C5680970"],"synonyms":[{"name":"hereditary syringomyelia","type":"exact"}],"termid":"MONDO:0018257","xrefs":{"Monarch":{"xref_id":"0018257"}}}


id: PBO:0012851
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.1","termid":"PBO:0012851"}


id: GO:0071847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of tumor necrosis factor ligand superfamily member 11 (TNFSF11) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:18606301","GOC:BHF","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete TNFSF11-mediated signaling pathway (obsolete GO:0071847)","synonyms":[{"name":"RANKL-mediated signaling pathway","type":"exact"},{"name":"TNF-related activation-induced cytokine-mediated signaling pathway","type":"exact"},{"name":"TNFSF11-mediated signalling pathway","type":"exact"},{"name":"receptor activator of nuclear factor kappa-B ligand signaling pathway","type":"exact"},{"name":"tumor necrosis factor superfamily member 11-mediated signaling pathway","type":"exact"}],"termid":"GO:0071847"}


id: GO:0010118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of opening or closing of stomata, which is directly related to the stomatal conductance (measuring rate of passage of either water vapor or carbon dioxide (CO2) through stomata).","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal movement","termid":"GO:0010118"}


id: GO:1902923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(3-hydroxyvalerate).","definition_xrefs":["GO_REF:0000068","GOC:mengo_curators","PMID:21705209","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) biosynthetic process","termid":"GO:1902921"},{"relation_name":"is_a","term_name":"poly(3-hydroxyvalerate) metabolic process","termid":"GO:1902922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(3-hydroxyvalerate) biosynthetic process","synonyms":[{"name":"poly(3-hydroxyvalerate) anabolism","type":"exact"},{"name":"poly(3-hydroxyvalerate) biosynthesis","type":"exact"},{"name":"poly(3-hydroxyvalerate) formation","type":"exact"},{"name":"poly(3-hydroxyvalerate) synthesis","type":"exact"}],"termid":"GO:1902923"}


id: PR:Q10077
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lid2 complex component snt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.12c","synonyms":[{"name":"Lid2C component snt2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snt2","type":"exact"}],"termid":"PR:Q10077"}


id: GO:0035474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The segregation of angioblasts into discrete arterial and venous vessels from one common precursor vessel.","definition_xrefs":["PMID:19815777","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selective angioblast sprouting","termid":"GO:0035474"}


id: FYPO:0001151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition when the cell is subject to starvation for one or more nutrients.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition during starvation","synonyms":[{"name":"cell cycle arrest at mitotic G2/M phase transition during depletion","type":"exact"},{"name":"cell cycle arrest at mitotic G2/M phase transition during deprivation","type":"exact"},{"name":"cell cycle arrest in mitotic G2 phase during starvation","type":"related"},{"name":"mitotic G2 phase arrest during starvation","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition during starvation","type":"exact"}],"termid":"FYPO:0001151"}


id: PBO:0031551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_peptidase_activity","termid":"PBO:0031551"}


id: PBO:0081171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 9 pseudogene 1","termid":"PBO:0081171"}


id: SO:0001199
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ss_RNA_viral_sequence is a viral_sequence that is the sequence of a virus that exists as single stranded RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ss_RNA_viral_sequence","synonyms":[{"name":"single strand RNA virus","type":"exact"},{"name":"ss RNA viral sequence","type":"exact"}],"termid":"SO:0001199"}


id: PBO:0072507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 36","termid":"PBO:0072507"}


id: PBO:0073399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 2","termid":"PBO:0073399"}


id: MONDO:0016527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease due to lactate dehydrogenase deficiency","secondary_identifiers":["icd11.foundation:1092207912","MEDGEN:1805539","GARD:3159","MESH:C580233","Orphanet:2364","UMLS:C5575057"],"synonyms":[{"name":"GSD due to lactate dehydrogenase deficiency","type":"exact"},{"name":"LDH deficiency","type":"exact"},{"name":"glycogenosis due to lactate dehydrogenase deficiency","type":"exact"},{"name":"lactate dehydrogenase deficiency","type":"related"}],"termid":"MONDO:0016527","xrefs":{"Monarch":{"xref_id":"0016527"}}}


id: PBO:0057518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 636","termid":"PBO:0057518"}


id: MONDO:0007343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated congenital digital clubbing is a rare genodermatosis disorder characterized by enlargement of the terminal segments of fingers and toes with thickened nails without any other abnormality.","definition_xrefs":["Orphanet:217059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital digital clubbing","secondary_identifiers":["GARD:17117","icd11.foundation:130631845","MEDGEN:576901","UMLS:C0345408","OMIM:119900"],"synonyms":[{"name":"acropachy, hereditary","type":"related"},{"name":"clubbing of digits","type":"related"},{"name":"digital clubbing, isolated congenital","type":"related"},{"name":"isolated congenital acropachy","type":"exact"},{"name":"isolated congenital nail clubbing","type":"exact"}],"termid":"MONDO:0007343","xrefs":{"Monarch":{"xref_id":"0007343"}}}


id: FYPO:0004333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PMID:22139357","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during cellular response to oxidative stress","termid":"FYPO:0003692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to hydrogen peroxide","synonyms":[{"name":"increased protein phosphorylation during cellular response to H2O2","type":"exact"},{"name":"increased protein phosphorylation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0004333"}


id: PBO:0091287
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not complemented by S. cerevisiae NRD1","termid":"PBO:0091287"}


id: GO:0070829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chromatin organization process that preserves heterochromatin in a stable functional or structural state.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heterochromatin maintenance (obsolete GO:0070829)","synonyms":[{"name":"heterochromatin maintenance involved in chromatin silencing","type":"related"},{"name":"maintenance of chromatin silencing","type":"related"},{"name":"maintenance of heterochromatic silencing","type":"related"}],"termid":"GO:0070829"}


id: MOD:01663
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(ADP-ribosyl)-L-threonine.","definition_xrefs":["PubMed:20185726","RESID:AA0519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(ADP-ribosyl)-L-threonine","synonyms":[{"name":"(S)-2-amino-3-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]oxy)-butanoic acid","type":"exact"},{"name":"O-(ADP-ribosyl)-L-threonine","type":"exact"},{"name":"O3-(ADP-ribosyl)-L-threonine","type":"exact"},{"name":"O3-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-threonine","type":"exact"},{"name":"O3-alpha-D-ribofuranosyl-L-threonine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"}],"termid":"MOD:01663"}


id: MONDO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma of the ovary composed exclusively or predominantly of a single type of tissue derived from the ectoderm or endoderm. A representative example is struma ovarii which is a teratoma composed exclusively or predominantly of thyroid tissue.","definition_xrefs":["NCIT:C8113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian monodermal teratoma","termid":"MONDO:0003331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian monodermal and highly specialized teratoma","secondary_identifiers":["UMLS:C0280134","DOID:2641","MEDGEN:83601"],"synonyms":[{"name":"ovarian germ cell monodermal and highly specialised teratoma","type":"exact"},{"name":"ovarian germ cell monodermal and highly specialized teratoma","type":"exact"},{"name":"ovarian monodermal and highly specialized teratoma","type":"exact"}],"termid":"MONDO:0002372","xrefs":{"Monarch":{"xref_id":"0002372"}}}


id: GO:0070403
data:
  {"annotated_genes":["SJAG_04039","SJAG_04186","SJAG_03152","SJAG_01075","SJAG_04652"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89571,103683,111422,113869,114251],"is_not":false,"summary":null,"term":"GO:0070403"}]},"cv_name":"molecular_function","definition":"Binding to the oxidized form, NAD, of nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"NAD binding","termid":"GO:0051287"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_03152":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04652":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NAD+ binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD (oxidized) binding","type":"exact"},{"name":"NAD binding","type":"related"},{"name":"oxidized NAD binding","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide binding","type":"exact"}],"termid":"GO:0070403","terms_by_termid":{"GO:0070403":null}}


id: GO:1900722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein adenylylation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein adenylylation","termid":"GO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein adenylylation","synonyms":[{"name":"regulation of protein AMPylation","type":"exact"},{"name":"regulation of protein adenylation","type":"exact"},{"name":"regulation of protein amino acid adenylylation","type":"exact"}],"termid":"GO:1900722"}


id: GO:0070305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cGMP (cyclic GMP, guanosine 3',5'-cyclophosphate) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cGMP","synonyms":[{"name":"response to 3',5' cGMP","type":"exact"},{"name":"response to 3',5'-cGMP","type":"exact"},{"name":"response to cyclic GMP","type":"exact"},{"name":"response to guanosine 3',5'-cyclophosphate","type":"exact"}],"termid":"GO:0070305"}


id: GO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a misfolded protein stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:add","PMID:15226511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to misfolded protein","termid":"GO:0051788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of misfolded protein","termid":"GO:0002236"}


id: MONDO:1010572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in long-tailed chinchilla.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, long-tailed chinchilla","secondary_identifiers":["OMIA:000279-34839"],"termid":"MONDO:1010572","xrefs":{"Monarch":{"xref_id":"1010572"}}}


id: FYPO:0002661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose 6-phosphate measured in a cell is lower than normal when the cell is subject to heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose 6-phosphate level","termid":"FYPO:0002660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular trehalose 6-phosphate level during heat shock","synonyms":[{"name":"decreased cellular trehalose 6-phosphate level during heat shock during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose 6-phosphate level during vegetative growth and during heat shock","type":"exact"},{"name":"decreased cellular trehalose-6P level during heat shock","type":"exact"},{"name":"decreased trehalose 6-phosphate accumulation during heat shock","type":"related"},{"name":"reduced cellular trehalose 6-phosphate level during heat shock","type":"exact"}],"termid":"FYPO:0002661"}


id: GO:0102832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: verbascose + alpha-D-galactosyl-(1->3)-1D-myo-inositol = ajugose + myo-inositol.","definition_xrefs":["GOC:pz","PMID:11675396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"verbascose galactinol:ajugose galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8288"],"termid":"GO:0102832"}


id: PBO:0073365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family H member 1 pseudogene 1","termid":"PBO:0073365"}


id: GO:0005148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prolactin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"prolactin receptor binding","synonyms":[{"name":"prolactin","type":"narrow"},{"name":"prolactin receptor ligand","type":"narrow"}],"termid":"GO:0005148"}


id: PBO:0005846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, unknown biological role","termid":"PBO:0005846"}


id: SO:0000027
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_junction_loop","termid":"SO:0000026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_hook_turn","synonyms":[{"name":"RNA hook turn","type":"exact"},{"name":"hook turn","type":"related"},{"name":"hook-turn motif","type":"exact"}],"termid":"SO:0000027"}


id: FYECO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with proline as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, proline nitrogen source","termid":"FYECO:0000246"}


id: GO:0046560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity, cleaving Phe24-Phe, but not Leu15-Tyr and Phe25-Tyr in the B chain of insulin.","definition_xrefs":["EC:3.4.23.32"],"gene_count":0,"genotype_count":0,"name":"obsolete scytalidopepsin B activity (obsolete GO:0046560)","synonyms":[{"name":"Ganoderma lucidum aspartic proteinase activity","type":"related"},{"name":"Ganoderma lucidum carboxyl proteinase activity","type":"related"},{"name":"SLB","type":"related"},{"name":"Scytalidium aspartic proteinase B activity","type":"related"},{"name":"Scytalidium lignicolum aspartic proteinase B","type":"related"},{"name":"scytalidopepsin B activity","type":"exact"}],"termid":"GO:0046560"}


id: PBO:0030082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip","termid":"PBO:0030082"}


id: PBO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Iec5","termid":"PBO:0001994"}


id: GO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a protein or protein complex, to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, protein binding (obsolete GO:0000988)","synonyms":[{"name":"protein binding transcription factor activity","type":"exact"},{"name":"transcription factor activity","type":"broad"}],"termid":"GO:0000988"}


id: MONDO:0800364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX12 defect","termid":"MONDO:0100266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0019053","MONDO:0005066","MONDO:0005244","MONDO:0006025"],"is_obsolete":false,"name":"peroxisome biogenesis disorder, complementation group 3","secondary_identifiers":["UMLS:C1866340","MEDGEN:356508"],"synonyms":[{"name":"CG3","type":"exact"}],"termid":"MONDO:0800364","xrefs":{"Monarch":{"xref_id":"0800364"}}}


id: MONDO:0012435
data:
  {"annotated_genes":["SJAG_01597"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84878],"is_not":false,"summary":null,"term":"MONDO:0012435"}]},"cv_name":"mondo","definition":"A syndrome characterized by severe early onset (before the age of three years) dilated cardiomyopathy (DCM) with conduction defects (long QT syndrome), non-progressive cerebellar ataxia, testicular dysgenesis, and 3-methylglutaconic aciduria.","definition_xrefs":["Orphanet:66634"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565706","MEDGEN:347542","NCIT:C173146","UMLS:C1857776","SCTID:711412004","OMIM:610198","icd11.foundation:422277813","DOID:0110000","GARD:12964"],"synonyms":[{"name":"3 alpha methylglutaconic aciduria type V","type":"related"},{"name":"3 methylglutaconic aciduria type V","type":"related"},{"name":"3-METHYLGLUTACONIC aciduria, type V","type":"related"},{"name":"3-Methylglutaconic aciduria, type 5","type":"related"},{"name":"3-methylglutaconic aciduria caused by mutation in DNAJC19","type":"exact"},{"name":"3-methylglutaconic aciduria type 5","type":"exact"},{"name":"3-methylglutaconic aciduria type V","type":"exact"},{"name":"DCMA","type":"exact"},{"name":"DCMA syndrome","type":"exact"},{"name":"DNAJC19 3-methylglutaconic aciduria","type":"exact"},{"name":"MGA 5","type":"related"},{"name":"MGA V","type":"related"},{"name":"MGA5","type":"exact"},{"name":"MGCA5","type":"exact"},{"name":"Mga, type 5","type":"related"},{"name":"cardiomyopathy, dilated, with ataxia","type":"related"},{"name":"dilated cardiomyopathy with ataxia","type":"exact"}],"termid":"MONDO:0012435","terms_by_termid":{"MONDO:0012435":null},"xrefs":{"Monarch":{"xref_id":"0012435"}}}


id: FYPO:0009032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of bortezomib than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to bortezomib","synonyms":[{"name":"resistance to bortezomib during mitotic cell cycle","type":"related"},{"name":"resistance to bortezomib during vegetative growth","type":"exact"},{"name":"resistant to bortezomib","type":"exact"}],"termid":"FYPO:0009032"}


id: FYPO:0007026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional modification of a guanosine residue in a tRNA molecule to form wybutosine occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"},{"relation_name":"is_a","term_name":"abnormal tRNA modification","termid":"FYPO:0001765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"decreased tRNA wybutosine biosynthesis","synonyms":[{"name":"decreased tRNA wybutosine biosynthesis during mitotic cell cycle","type":"related"},{"name":"decreased tRNA wybutosine biosynthesis during vegetative growth","type":"exact"},{"name":"decreased tRNA wybutosine biosynthetic process","type":"exact"},{"name":"decreased tRNA wybutosine formation","type":"exact"},{"name":"decreased tRNA yW formation","type":"exact"},{"name":"decreased wybutosine level in tRNA","type":"related"},{"name":"reduced tRNA wybutosine biosynthesis","type":"exact"}],"termid":"FYPO:0007026"}


id: MONDO:0013031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"periventricular nodular heterotopia","termid":"MONDO:0020341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"chromosome 5Q14.3 deletion syndrome, distal","secondary_identifiers":["OMIM:612881","GARD:15589","MEDGEN:442882","MESH:C567876","UMLS:C2752071"],"synonyms":[{"name":"chromosome 5Q14.3 deletion syndrome, distal","type":"exact"},{"name":"heterotopia, periventricular, associated with chromosome 5Q deletion","type":"related"},{"name":"periventricular nodular heterotopia 5","type":"related"}],"termid":"MONDO:0013031","xrefs":{"Monarch":{"xref_id":"0013031"}}}


id: PBO:0067370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 471, pseudogene","termid":"PBO:0067370"}


id: PBO:0112998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha arrestin, substrate of calcineurin; controls nutrient-mediated intracellular sorting of permease Gap1p; interacts with AP-1 subunit Apl4p; dephosphorylation of Aly1p required for the endocytosis of Dip5p; may regulate endocytosis of plasma membrane proteins by recruiting ubiquitin ligase Rsp5p to plasma membrane targets; regulates intracellular pH; ALY1 has a paralog, ALY2, that arose from the whole genome duplication","termid":"PBO:0112998"}


id: GO:0072633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-30 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:30328794","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-30 production","secondary_identifiers":["GO:0072634"],"synonyms":[{"name":"IL-30 production","type":"exact"},{"name":"interleukin-30 complex production","type":"exact"},{"name":"interleukin-30 secretion","type":"narrow"}],"termid":"GO:0072633"}


id: GO:0042636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair.","definition_xrefs":["GOC:go_curators","PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair cycle","termid":"GO:0042634"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"hair cycle","termid":"GO:0042633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hair cycle","synonyms":[{"name":"down regulation of hair cycle","type":"exact"},{"name":"down-regulation of hair cycle","type":"exact"},{"name":"downregulation of hair cycle","type":"exact"},{"name":"inhibition of hair cycle","type":"narrow"}],"termid":"GO:0042636"}


id: PBO:0030219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_alpha,alpha-trehalase_activity","termid":"PBO:0030219"}


id: FYPO:0003276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium hypochlorite. Cells stop growing (and may die) at a concentration of sodium hypochlorite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to sodium hypochlorite","synonyms":[{"name":"hypersensitive to sodium hypochlorite","type":"exact"},{"name":"sensitive to NaOCl","type":"exact"},{"name":"sensitive to sodium hypochlorite during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium hypochlorite during vegetative growth","type":"exact"}],"termid":"FYPO:0003276"}


id: GO:0019295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of coenzyme M (2-thioethansulfonate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"coenzyme M metabolic process","termid":"GO:0019296"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"coenzyme M biosynthetic process","secondary_identifiers":["MetaCyc:P261-PWY"],"synonyms":[{"name":"coenzyme M anabolism","type":"exact"},{"name":"coenzyme M biosynthesis","type":"exact"},{"name":"coenzyme M formation","type":"exact"},{"name":"coenzyme M synthesis","type":"exact"}],"termid":"GO:0019295"}


id: PBO:0057837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3153","termid":"PBO:0057837"}


id: PATO:0002129
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition to invade surrounding tissues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, invasive","termid":"PATO:0002129"}


id: PBO:0061579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTM intronic transcript","termid":"PBO:0061579"}


id: PATO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001147 absolute resistance value (obsolete PATO:0001147)","termid":"PATO:0001147"}


id: GO:0033452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"GUG codon-amino acid adaptor activity","synonyms":[{"name":"GTG codon-amino acid adaptor activity","type":"exact"},{"name":"valine tRNA","type":"related"}],"termid":"GO:0033452"}


id: GO:0000477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cleavage within ITS2 to generate the mature 5'-end of an LSU-rRNA derived from a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","synonyms":[{"name":"processing at C1","type":"narrow"}],"termid":"GO:0000477"}


id: PBO:0070527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 26","termid":"PBO:0070527"}


id: GO:0003939
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104520],"is_not":false,"summary":null,"term":"GO:0003939"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-iditol + NAD+ = L-sorbose + NADH + H+. Acts on a number of sugar alcohols, including (but not limited to) L-iditol, D-glucitol, D-xylitol, and D-galactitol.","definition_xrefs":["EC:1.1.1.14","PMID:13373783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-iditol 2-dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:L-IDITOL-2-DEHYDROGENASE-RXN","Reactome:R-HSA-5652195"],"synonyms":[{"name":"L-iditol (sorbitol) dehydrogenase activity","type":"related"},{"name":"L-iditol:NAD oxidoreductase activity","type":"related"},{"name":"L-iditol:NAD+ 5-oxidoreductase activity","type":"related"},{"name":"NAD+-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-sorbitol dehydrogenase","type":"related"},{"name":"glucitol dehydrogenase activity","type":"related"},{"name":"polyol dehydrogenase activity","type":"broad"},{"name":"sorbitol dehydrogenase activity","type":"related"}],"termid":"GO:0003939","terms_by_termid":{"GO:0003939":null}}


id: PATO:0000815
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000815 absolute odor acuity value (obsolete PATO:0000815)","termid":"PATO:0000815"}


id: PBO:0030700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hydrogen_peroxide","termid":"PBO:0030700"}


id: GO:0008650
data:
  {"annotated_genes":["SJAG_00722","SJAG_03773","SJAG_03332"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89143,100840,107846],"is_not":false,"summary":null,"term":"GO:0008650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing 2'-O-methyluridine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (uridine) methyltransferase activity","termid":"GO:0016436"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_03332":null,"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140098","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"rRNA (uridine-2'-O-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6793127"],"termid":"GO:0008650","terms_by_termid":{"GO:0008650":null}}


id: MONDO:0023003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double fingernail of fifth finger","termid":"MONDO:0023003","xrefs":{"Monarch":{"xref_id":"0023003"}}}


id: GO:0120246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylenic compound metabolic process","synonyms":[{"name":"alkyne substituted compound metabolic process","type":"exact"},{"name":"alkyne substituted compound metabolism","type":"exact"}],"termid":"GO:0120246"}


id: MONDO:0060766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic polypoid lesion that arises from the anus. Representative examples include the fibroepithelial polyp and squamous papilloma.","definition_xrefs":["NCIT:C3957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anus disorder","termid":"MONDO:0002519"},{"relation_name":"is_a","term_name":"polyp of rectum","termid":"MONDO:0021398"},{"relation_name":"is_a","term_name":"gastrointestinal polyp","termid":"MONDO:0024292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anal polyp","secondary_identifiers":["SCTID:88580009","icd11.foundation:2038426249","UMLS:C0267573","MEDGEN:75637"],"synonyms":[{"name":"anal polyp","type":"exact"},{"name":"polyp of anus","type":"exact"},{"name":"polyp of the anus","type":"exact"}],"termid":"MONDO:0060766","xrefs":{"Monarch":{"xref_id":"0060766"}}}


id: MONDO:0004373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary meningioma occurring in adults.","definition_xrefs":["NCIT:C8293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdoid meningioma","termid":"MONDO:0003262"},{"relation_name":"is_a","term_name":"papillary meningioma","termid":"MONDO:0021088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult papillary meningioma","secondary_identifiers":["MEDGEN:76256","UMLS:C0281334","DOID:7826"],"synonyms":[{"name":"adult papillary meningioma","type":"exact"},{"name":"papillary meningioma","type":"broad"},{"name":"papillary meningioma of adults","type":"exact"}],"termid":"MONDO:0004373","xrefs":{"Monarch":{"xref_id":"0004373"}}}


id: PBO:0076582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 7","termid":"PBO:0076582"}


id: GO:0060835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the specification of the oral/aboral axis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor receptor beta signaling pathway involved in oral/aboral axis specification (obsolete GO:0060835)","synonyms":[{"name":"transforming growth factor receptor beta signalling pathway involved in oral/aboral axis specification","type":"exact"}],"termid":"GO:0060835"}


id: GO:0045194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of oxidized low-density lipoproteins.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidized low-density lipoprotein catabolic process (obsolete GO:0045194)","synonyms":[{"name":"Ox-LDL catabolic process","type":"exact"},{"name":"Ox-LDL catabolism","type":"exact"},{"name":"oxidized low-density lipoprotein breakdown","type":"exact"},{"name":"oxidized low-density lipoprotein catabolic process","type":"exact"},{"name":"oxidized low-density lipoprotein catabolism","type":"exact"},{"name":"oxidized low-density lipoprotein degradation","type":"exact"}],"termid":"GO:0045194"}


id: FYPO:0003960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of diacylglycerol O-acyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal diacylglycerol O-acyltransferase activity","termid":"FYPO:0003958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased diacylglycerol O-acyltransferase activity","synonyms":[{"name":"increased DGAT activity","type":"exact"},{"name":"increased diacylglycerol acyltransferase activity","type":"broad"}],"termid":"FYPO:0003960"}


id: PBO:0024819
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains PCB","termid":"PBO:0024819"}


id: GO:0141196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transposable element silencing mechanism mediated by Piwi-associated RNA (piRNA)-directed DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:32674113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposable element silencing by heterochromatin formation","termid":"GO:0141005"},{"relation_name":"is_a","term_name":"gene silencing by piRNA-directed DNA methylation","termid":"GO:0141176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"transposable element silencing by piRNA-mediated DNA methylation","synonyms":[{"name":"retrotransposon silencing by piRNA-directed DNA methylation","type":"narrow"},{"name":"transposable element silencing by piRNA-directed DNA methylation","type":"exact"}],"termid":"GO:0141196"}


id: PBO:0074916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 87","termid":"PBO:0074916"}


id: MONDO:0009820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoporosis pseudoglioma syndrome is a very rare autosomal recessive disorder characterized by congenital or infancy-onset blindness and severe juvenile-onset osteoporosis and spontaneous fractures.","definition_xrefs":["Orphanet:2788"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"},{"relation_name":"is_a","term_name":"LRP5-related exudative vitreoretinopathy","termid":"MONDO:0700228"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320","MONDO:0005559","MONDO:0005497","MONDO:0005328"],"is_obsolete":false,"name":"osteoporosis-pseudoglioma syndrome","secondary_identifiers":["MESH:C536063","MEDGEN:98480","OMIM:259770","GARD:4160","NCIT:C130998","UMLS:C0432252","DOID:0060849","MedDRA:10052452"],"synonyms":[{"name":"OPPG","type":"exact"},{"name":"Ops","type":"related"},{"name":"ocular form of osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta ocular form","type":"related"},{"name":"osteogenesis imperfecta, ocular form","type":"related"},{"name":"osteoporosis pseudoglioma syndrome","type":"related"},{"name":"osteoporosis-pseudoglioma syndrome","type":"exact"},{"name":"pseudoglioma with bone fragility","type":"related"}],"termid":"MONDO:0009820","xrefs":{"Monarch":{"xref_id":"0009820"}}}


id: FYPO:0000922
data:
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id: GO:0033554
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vps4-ts(I307T L327S aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild 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temperature","references_by_uniquename":{"PMID:23786411":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01956","SJAG_04464","SJAG_04697","SJAG_02592","SJAG_04312","SJAG_03575","SJAG_03048","SJAG_04332","SJAG_00426","SJAG_00266","SJAG_03596","SJAG_03892"],"single_locus_genotype_uniquenames":["cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","gms1delta","sty1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pka1delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","atf1delta"],"synonyms":[{"name":"33 degrees Celsius","type":"narrow"},{"name":"34 degrees Celsius","type":"narrow"},{"name":"35 degrees Celsius","type":"narrow"},{"name":"36 degrees Celsius","type":"narrow"},{"name":"37 degrees Celsius","type":"narrow"},{"name":"38 degrees Celsius","type":"narrow"},{"name":"39 degrees Celsius","type":"narrow"},{"name":"40 degrees Celsius","type":"narrow"},{"name":"41 degrees Celsius","type":"related"},{"name":"42 degrees Celsius","type":"related"},{"name":"43 degrees Celsius","type":"related"}],"termid":"FYECO:0000004","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: FYPO:0006028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:11694585","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"decreased protein localization to actin cortical patch","termid":"FYPO:0006120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to actin cortical patch, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to actin cortical patch, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to actin cortical patch, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to actin cortical patch, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to actin patch, with protein mislocalized to cytoplasm","type":"exact"},{"name":"reduced protein localization to actin cortical patch, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0006028"}


id: FYPO:0001479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal alpha,alpha-trehalase activity","synonyms":[{"name":"abnormal neutral trehalase activity","type":"exact"},{"name":"abnormal trehalase activity","type":"broad"}],"termid":"FYPO:0001479"}


id: GO:0034155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 7 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 7 signaling pathway","termid":"GO:0034154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 7 signaling pathway","synonyms":[{"name":"regulation of TLR7 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034155"}


id: PBO:0078913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 3-2","termid":"PBO:0078913"}


id: PBO:0003285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Elg1","termid":"PBO:0003285"}


id: GO:0031816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y6 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"P2Y6 nucleotide receptor binding","synonyms":[{"name":"P2Y6 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031816"}


id: GO:0071063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive sensory mechanical stimulus resulting from air flow, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["GOC:mah","PMID:19279637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of wind","synonyms":[{"name":"perception of wind","type":"exact"},{"name":"sensory perception of air flow","type":"exact"}],"termid":"GO:0071063"}


id: SO:0001646
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genetic marker, discovered using Diversity Arrays Technology (DArT) technology.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic_marker","termid":"SO:0001645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DArT_marker","synonyms":[{"name":"DArT marker","type":"exact"}],"termid":"SO:0001646"}


id: PBO:0082794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U4/U6.U5 snRNP complex; involved in mRNA splicing via spliceosome","termid":"PBO:0082794"}


id: MONDO:0016464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type B insulin-resistance syndrome belongs to the group of extreme insulin-resistance syndromes (which includes leprechaunism, the lipodystrophies, Rabson-Mendenhall syndrome, and type A insulin resistance syndrome) and occurs in the context of immune dysfunction.","definition_xrefs":["Orphanet:2298"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"insulin-resistance syndrome type B","secondary_identifiers":["GARD:3009","MEDGEN:574967","icd11.foundation:408487090","UMLS:C0342337"],"synonyms":[{"name":"insulin-resistance type B","type":"related"}],"termid":"MONDO:0016464","xrefs":{"Monarch":{"xref_id":"0016464"}}}


id: PBO:0078403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma locus","termid":"PBO:0078403"}


id: PBO:0089759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine protein transferase Ate1","termid":"PBO:0089759"}


id: GO:0019523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-idonate, the anion of idonic acid, an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-idonate metabolic process","secondary_identifiers":["MetaCyc:IDNCAT-PWY"],"synonyms":[{"name":"L-idonate metabolism","type":"exact"}],"termid":"GO:0019523"}


id: PBO:0089432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bet1","termid":"PBO:0089432"}


id: GO:0060522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range from mesenchymal cells to cells of an epithelium that results in a developmental change in the epithelial cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive cell-cell signaling","termid":"GO:0031129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inductive mesenchymal to epithelial cell signaling","synonyms":[{"name":"inductive mesenchymal to epithelial cell signalling","type":"exact"}],"termid":"GO:0060522"}


id: PBO:0000578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family","termid":"PBO:0000578"}


id: PBO:0042188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin C","termid":"PBO:0042188"}


id: MONDO:0006977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign testicular cyst that is located in the epididymis, and which contains serous fluid, lymphocytes, spermatozoa, and debris.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatocele","secondary_identifiers":["icd11.foundation:1907004531","EFO:1001189","ICD9:608.1","MEDGEN:20857","UMLS:C0037859","MESH:D013088","MedDRA:10041490","SCTID:49263001","DOID:11997","ICD10CM:N43.4"],"termid":"MONDO:0006977","xrefs":{"Monarch":{"xref_id":"0006977"}}}


id: PBO:0083195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene GIP3/YPL137C","termid":"PBO:0083195"}


id: PBO:0085985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for efficient 5' processing of mitochondrial tRNAs, for respiratory growth and mitochondrial genome maintenance; null mutation results in a decrease in plasma membrane electron transport; localizes to the matrix side of the inner mitochondrial membrane","termid":"PBO:0085985"}


id: PBO:0048265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 3","termid":"PBO:0048265"}


id: PBO:0046329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase superfamily member 1","termid":"PBO:0046329"}


id: FYPO:0003532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the monopolar index is higher than normal. The monopolar index is the proportion of the population undergoing monopolar growth at any given time.","definition_xrefs":["PomBase:mah","PMID:20501954","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"output_of","term_name":"decreased NETO","termid":"FYPO:0003150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005568","FYPO:0000003","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased monopolar index","synonyms":[{"name":"increased frequency of monopolar growth polarity","type":"related"},{"name":"increased number of cells undergoing monopolar growth","type":"exact"}],"termid":"FYPO:0003532"}


id: PBO:0025502
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase deficiency","termid":"PBO:0025502"}


id: GO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amphetamine","termid":"GO:0001975"}


id: GO:0120317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and organization of the sperm mitochondrial sheath, the tightly packed helical sheath of ATP-producing mitochondria restricted to the midpiece of the sperm flagellum.","definition_xrefs":["GOC:krc","PMID:32791035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"sperm flagellum assembly","termid":"GO:0120316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"sperm mitochondrial sheath assembly","termid":"GO:0120317"}


id: PATO:0000856
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000856 flinch reflex value (obsolete PATO:0000856)","termid":"PATO:0000856"}


id: PBO:0088084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing substrate adaptor for Cdc48p; ubiquitin regulatory X domain-containing protein that acts as a substrate recruiting cofactor for Cdc48p; positively regulates Glc7p PPase activity to promote growth and mitotic progression in complex with Cdc48p; ubiquitinated protein interactor involved in ER-associated degradation (ERAD); regulated by nuclear Ub-dependent degradation (INMAD pathway) independent of the Asi and Doa10 complexes; homolog of human p47 (NSFL1C)","termid":"PBO:0088084"}


id: FYPO:0001012
data:
  {"alleles_by_uniquename":{"SJAG_03164:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03164","name":"ura4delta","uniquename":"SJAG_03164:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118649],"is_not":false,"summary":null,"term":"FYPO:0001012"}]},"cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize uracil, and therefore requires uracil in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03164":null},"genotype_count":1,"genotypes_by_uniquename":{"ura4delta":{"display_name":"ura4delta","display_uniquename":"ura4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03164:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for uracil","references_by_uniquename":{"PMID:19330769":null},"single_locus_annotated_genes":["SJAG_03164"],"single_locus_genotype_uniquenames":["ura4delta"],"synonyms":[{"name":"growth auxotrophic for uracil during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for uracil during vegetative growth","type":"exact"},{"name":"uracil auxotrophy","type":"exact"}],"termid":"FYPO:0001012","terms_by_termid":{"FYPO:0001012":null}}


id: PBO:0059058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1A pseudogene 1","termid":"PBO:0059058"}


id: GO:0045021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. DNA repair pathways that do not increase the mutation rate above spontaneous background levels, e.g. excision and recombination pathways.","definition_xrefs":["GOC:jl","PMID:11459974"],"gene_count":0,"genotype_count":0,"name":"obsolete error-free DNA repair (obsolete GO:0045021)","synonyms":[{"name":"error-free DNA repair","type":"exact"}],"termid":"GO:0045021"}


id: GO:2001255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K36 trimethylation.","definition_xrefs":["PMID:17948059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K36 trimethylation (obsolete GO:2001255)","termid":"GO:2001255"}


id: PBO:0044372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cylicin 2","termid":"PBO:0044372"}


id: MONDO:0018469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary non-tuberculous mycobacterial infection","secondary_identifiers":["icd11.foundation:1798822437","GARD:12829","UMLS:C3472679","MEDGEN:758704","NORD:1887","Orphanet:411703"],"synonyms":[{"name":"Nontuberculous Mycobacterial Lung Disease","type":"exact"},{"name":"non-tuberculous mycobacterial lung disease","type":"exact"},{"name":"nontuberculous mycobacterial lung disease","type":"related"}],"termid":"MONDO:0018469","xrefs":{"Monarch":{"xref_id":"0018469"}}}


id: GO:0070855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the head/neck region of a myosin VI heavy chain.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin head/neck binding","termid":"GO:0032028"},{"relation_name":"is_a","term_name":"myosin VI heavy chain binding","termid":"GO:0070854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"myosin VI head/neck binding","termid":"GO:0070855"}


id: FYPO:0002276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein degradation","synonyms":[{"name":"increased protein breakdown","type":"exact"},{"name":"increased protein catabolic process","type":"exact"},{"name":"increased protein catabolism","type":"exact"}],"termid":"FYPO:0002276"}


id: GO:0016679
data:
  {"annotated_genes":["SJAG_07006","SJAG_00601","SJAG_MIT03","SJAG_00755","SJAG_01490","SJAG_02646","SJAG_03490"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117601,107428,118490,112844,117128,103975,103562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_00755":null,"SJAG_01490":null,"SJAG_02646":null,"SJAG_03490":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.10.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors","type":"narrow"}],"termid":"GO:0016679","terms_by_termid":{"GO:0008121":null}}


id: PBO:0083370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps verified ORF ALG3","termid":"PBO:0083370"}


id: PBO:0089188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein, nucleoside-triphosphate diphosphatase, human ASMTL ortholog","termid":"PBO:0089188"}


id: GO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the melanosome membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"melanosome","termid":"GO:0042470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"melanosome lumen","termid":"GO:0034493"}


id: GO:0003176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the aortic valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semi-lunar valve development","termid":"GO:1905314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aortic valve development","termid":"GO:0003176"}


id: GO:2000777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of proteasomal ubiquitin-dependent protein catabolic process that is involved in a cellular response to hypoxia.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia (obsolete GO:2000777)","synonyms":[{"name":"positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxic stress","type":"exact"},{"name":"positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:2000777"}


id: PBO:0031676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_localization","termid":"PBO:0031676"}


id: GO:0043422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein kinase B, an intracellular kinase that is important in regulating glucose metabolism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein kinase B binding","synonyms":[{"name":"Akt binding","type":"exact"},{"name":"PKB binding","type":"exact"}],"termid":"GO:0043422"}


id: GO:0030840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate filament polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intermediate filament polymerization","termid":"GO:0030839"},{"relation_name":"is_a","term_name":"negative regulation of protein polymerization","termid":"GO:0032272"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"negatively_regulates","term_name":"intermediate filament polymerization","termid":"GO:0045107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of intermediate filament polymerization","synonyms":[{"name":"down regulation of intermediate filament polymerization","type":"exact"},{"name":"down-regulation of intermediate filament polymerization","type":"exact"},{"name":"downregulation of intermediate filament polymerization","type":"exact"},{"name":"inhibition of intermediate filament polymerization","type":"narrow"},{"name":"negative regulation of intermediate filament polymerization and/or depolymerization","type":"broad"}],"termid":"GO:0030840"}


id: PR:G2TRP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21B10.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21B10.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.15","synonyms":[{"name":"Spom972h-SPBC21B10.15","type":"exact"}],"termid":"PR:G2TRP4"}


id: MOD:01964
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2-acetamido-4-glyceramido-2,4,6-trideoxy-D-glucosyl)-L-serine.","definition_xrefs":["PubMed:17804791","RESID:AA0608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(2-acetamido-4-glyceramido-2,4,6-trideoxy-D-glucosyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[(2-acetamido-4-glycerylamino-2,4,6-trideoxy-D-glucopyranosyl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GATDGlc) serine","type":"exact"},{"name":"GATDH","type":"exact"},{"name":"O-(2-acetamido-4-glyceramido-2,4,6-trideoxy-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O-(2-acetamido-4-glyceramido-2,4,6-trideoxy-D-glucosyl)-L-serine","type":"exact"},{"name":"O-(N2-acetyl-N4-glycerylbacillosaminyl)-L-serine","type":"exact"}],"termid":"MOD:01964"}


id: MONDO:0008882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Long bone bowing is a congenital condition described by the presence of symmetric or asymmetric angular deformity and shortening of the long bones, particularly the femurs, tibiae and ulnae.","definition_xrefs":["Orphanet:2292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital deformities of limbs","termid":"MONDO:0017427"},{"relation_name":"is_a","term_name":"bent bone dysplasia","termid":"MONDO:0019698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital bowing of long bones","secondary_identifiers":["icd11.foundation:1261565213","GARD:953","MedDRA:10054064","MEDGEN:395251","OMIM:211355","UMLS:C1859394","SCTID:716098006"],"synonyms":[{"name":"bowing of long bones congenital","type":"related"},{"name":"bowing of long bones, asymmetric and symmetric","type":"related"}],"termid":"MONDO:0008882","xrefs":{"Monarch":{"xref_id":"0008882"}}}


id: PR:Q92375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04025","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3F6.03","secondary_identifiers":["UniProtKB:Q92375"],"synonyms":[{"name":"Spom972h-trxB","type":"exact"},{"name":"caffeine resistance protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92375"}


id: GO:0006726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment biosynthetic process","synonyms":[{"name":"eye pigment anabolism","type":"exact"},{"name":"eye pigment biosynthesis","type":"exact"},{"name":"eye pigment formation","type":"exact"},{"name":"eye pigment synthesis","type":"exact"}],"termid":"GO:0006726"}


id: PR:Q9Y7K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Nogo-B receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03491","PANTHER:PTHR21528:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate syntase complex subunit nus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.06c","secondary_identifiers":["UniProtKB:Q9Y7K8"],"synonyms":[{"name":"Spom972h-NUS1","type":"exact"},{"name":"UDS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"di-trans,poly-cis-decaprenylcistransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"undecaprenyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7K8"}


id: PBO:0062501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 1","termid":"PBO:0062501"}


id: PBO:0004602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protease cofactor Glp1 (predicted)","termid":"PBO:0004602"}


id: FYPO:0006145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ions is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:24569997","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion during meiotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper during meiotic cell cycle","type":"exact"},{"name":"decreased RNA level during meiotic cell cycle during copper excess","type":"related"},{"name":"decreased transcript level during cellular response to copper ion during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006145"}


id: MONDO:1011402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, non-human animal","secondary_identifiers":["OMIA:000284"],"termid":"MONDO:1011402","xrefs":{"Monarch":{"xref_id":"1011402"}}}


id: MONDO:0024245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine carcinoma","termid":"MONDO:0024240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"ductal eccrine adenocarcinoma","secondary_identifiers":["MEDGEN:266048","UMLS:C1260964","SCTID:403939009","DOID:5570","NCIT:C43345"],"synonyms":[{"name":"anaplastic syringoma","type":"exact"},{"name":"ductal eccrine adenocarcinoma","type":"exact"},{"name":"ductal eccrine carcinoma","type":"exact"},{"name":"eccrine ductal carcinoma","type":"exact"},{"name":"eccrine ductal carcinoma (morphologic abnormality)","type":"related"},{"name":"eccrine ductal carcinoma of skin","type":"related"},{"name":"hidradenocarcinoma","type":"related"},{"name":"malignant acrospiroma","type":"exact"},{"name":"malignant hidradenoma","type":"related"},{"name":"primary mucoepidermoid cutaneous carcinoma","type":"related"},{"name":"sweat gland carcinoma of the hand","type":"narrow"}],"termid":"MONDO:0024245","xrefs":{"Monarch":{"xref_id":"0024245"}}}


id: GO:0043729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + H2O = 2,5-diamino-6-(1-D-ribosylamino)pyrimidin-4(3H)-one 5'-phosphate + formate + H+.","definition_xrefs":["RHEA:27282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"2-amino-5-formylamino-6-(5-phosphoribosylamino)pyrimidin-4(3H)-one formate-lyase activity","secondary_identifiers":["EC:3.5.1.102"],"termid":"GO:0043729"}


id: FYPO:0001689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing 4-nitroquinoline N-oxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on 4-nitroquinoline N-oxide","synonyms":[{"name":"normal cell population growth in presence of 4-nitroquinoline N-oxide","type":"exact"},{"name":"normal cell population growth on 4-NQO","type":"exact"},{"name":"normal cell population growth on 4-nitroquinoline N-oxide","type":"exact"},{"name":"normal cell population growth on 4NQO","type":"exact"},{"name":"normal cellular response to 4-nitroquinoline N-oxide","type":"related"},{"name":"normal vegetative cell population growth on 4-nitroquinoline N-oxide","type":"exact"}],"termid":"FYPO:0001689"}


id: GO:0009824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + dimethylallyl diphosphate = N(6)-(dimethylallyl)adenosine 5'-phosphate + diphosphate.","definition_xrefs":["RHEA:15285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"AMP dimethylallyltransferase activity","secondary_identifiers":["EC:2.5.1.27","MetaCyc:RXN-4307","KEGG_REACTION:R04038"],"synonyms":[{"name":"2-isopentenyl-diphosphate:AMP 2-isopentenyltransferase activity","type":"exact"},{"name":"2-isopentenyl-diphosphate:AMP delta2-isopentenyltransferase activity","type":"exact"},{"name":"adenylate dimethylallyltransferase (AMP-dependent) activity","type":"exact"},{"name":"adenylate dimethylallyltransferase activity","type":"related"},{"name":"adenylate isopentenyltransferase activity","type":"broad"},{"name":"cytokinin synthase activity","type":"broad"},{"name":"dimethylallyl-diphosphate:AMP dimethylallyltransferase activity","type":"related"},{"name":"isopentenyltransferase activity","type":"broad"}],"termid":"GO:0009824"}


id: GO:0019465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The exchange of the amino group of aspartate, the anion derived from aspartic acid, for another amino group.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartate transamidation (obsolete GO:0019465)","termid":"GO:0019465"}


id: FYPO:0005473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate synthase activity using NADH as a cofactor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal glutamate synthase (NADH) activity","synonyms":[{"name":"normal L-glutamate synthase (NADH) activity","type":"exact"},{"name":"normal NADH-dependent glutamate synthase activity","type":"exact"},{"name":"normal NADH: GOGAT activity","type":"related"},{"name":"normal glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"}],"termid":"FYPO:0005473"}


id: GO:0016428
data:
  {"annotated_genes":["SJAG_00325","SJAG_02099","SJAG_01314"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89973,89974,93433,93434,105251],"is_not":false,"summary":null,"term":"GO:0016428"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in tRNA + S-adenosyl-L-methionine = a 5-methylcytidine in tRNA + S-adenosyl-L-homocysteine + H+. This modification can occur on seversal residues, including cytidine(34), cytidine(40), cytidine(48), and cytidine(49).","definition_xrefs":["RHEA:61468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (cytidine) methyltransferase activity","termid":"GO:0016427"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_01314":null,"SJAG_02099":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0140101","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"tRNA (cytidine-5-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8932765","Reactome:R-HSA-6785438","Reactome:R-HSA-6782419","Reactome:R-HSA-6782388","Reactome:R-HSA-6785409"],"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"tRNA (cytosine-5-)-methyltransferase activity","type":"exact"},{"name":"transfer RNA cytosine 5-methyltransferase activity","type":"related"},{"name":"transfer ribonucleate cytosine 5-methyltransferase activity","type":"related"}],"termid":"GO:0016428","terms_by_termid":{"GO:0016428":null}}


id: GO:0035696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a monocyte from the blood vessels into the surrounding tissue.","definition_xrefs":["CL:0000576","GOC:BHF","PMID:10657654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte extravasation","termid":"GO:0035696"}


id: PBO:0049940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA3 antisense RNA 1","termid":"PBO:0049940"}


id: GO:2000160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in heart morphogenesis (obsolete GO:2000160)","termid":"GO:2000160"}


id: PBO:0079065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 1-1","termid":"PBO:0079065"}


id: FYPO:0006625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in the plasma membrane is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatidylinositol phosphate level in plasma membrane","termid":"FYPO:0006222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased phosphatidylinositol-4,5-bisphosphate level in plasma membrane","synonyms":[{"name":"decreased 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate level in plasma membrane","type":"exact"},{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in cell membrane","type":"exact"},{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"decreased plasma membrane PI(4,5)P2 level","type":"exact"},{"name":"decreased plasma membrane phosphatidylinositol-4,5-bisphosphate level","type":"exact"},{"name":"reduced phosphatidylinositol-4,5-bisphosphate level in plasma membrane","type":"exact"}],"termid":"FYPO:0006625"}


id: GO:0046462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monoacylglycerol, any ester of glycerol in which any one of its hydroxyl groups has been acylated with a fatty acid, the other being non-esterified.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoacylglycerol metabolic process","synonyms":[{"name":"monoacylglycerol metabolism","type":"exact"},{"name":"monoglyceride metabolic process","type":"exact"},{"name":"monoglyceride metabolism","type":"exact"}],"termid":"GO:0046462"}


id: PBO:0028942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_non-growing_cell_tip","termid":"PBO:0028942"}


id: PBO:0064155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A1 member A","termid":"PBO:0064155"}


id: PR:O94449
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication factor C subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.03c","secondary_identifiers":["UniProtKB:O94449"],"synonyms":[{"name":"Spom972h-RFC2","type":"exact"},{"name":"replication factor C4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94449"}


id: GO:0031930
data:
  {"annotated_genes":["SJAG_03319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88357],"is_not":false,"summary":null,"term":"GO:0031930"}]},"cv_name":"biological_process","definition":"The series of molecular signals that forms a pathway of communication from the mitochondria to the nucleus and initiates cellular changes in response to changes in mitochondrial function.","definition_xrefs":["PMID:15068799","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mitochondria-nucleus signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondria-nucleus signal transduction","type":"exact"},{"name":"mitochondrial signaling pathway","type":"exact"},{"name":"mitochondrial signalling pathway","type":"exact"},{"name":"retrograde response","type":"exact"}],"termid":"GO:0031930","terms_by_termid":{"GO:0031930":null}}


id: GO:0061623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactose into pyruvate, with the concomitant production of a small amount of ATP.","definition_xrefs":["ISBN:0201090910","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose catabolic process","termid":"GO:0019388"},{"relation_name":"is_a","term_name":"glycolytic process through glucose-1-phosphate","termid":"GO:0061622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0005975","GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"glycolytic process from galactose","termid":"GO:0061623"}


id: PBO:0079946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 1","termid":"PBO:0079946"}


id: GO:1905751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endosome to plasma membrane protein transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22869721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"is_a","term_name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"},{"relation_name":"is_a","term_name":"positive regulation of endocytic recycling","termid":"GO:2001137"},{"relation_name":"positively_regulates","term_name":"endosome to plasma membrane protein transport","termid":"GO:0099638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of endosome to plasma membrane protein transport","synonyms":[{"name":"activation of endosome to plasma membrane protein transport","type":"narrow"},{"name":"up regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"up-regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"upregulation of endosome to plasma membrane protein transport","type":"exact"}],"termid":"GO:1905751"}


id: GO:1905561
data:
  {"annotated_genes":["SJAG_00718","SJAG_03048","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89162,101865,116118],"is_not":false,"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of kinetochore assembly.","definition_xrefs":["PMID:18765790","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of kinetochore assembly","termid":"GO:0090234"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"kinetochore assembly","termid":"GO:0051382"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of kinetochore assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901721"],"synonyms":[{"name":"activation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"activation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"activation of chromosome-kinetochore attachment","type":"narrow"},{"name":"activation of kinetochore assembly","type":"narrow"},{"name":"activation of kinetochore formation","type":"related"},{"name":"positive regulation of NMS complex assembly","type":"narrow"},{"name":"positive regulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"positive regulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"positive regulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"positive regulation of kinetochore formation","type":"related"},{"name":"up regulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"up regulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"up regulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"up regulation of kinetochore assembly","type":"exact"},{"name":"up regulation of kinetochore formation","type":"related"},{"name":"up-regulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"up-regulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"up-regulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"up-regulation of kinetochore assembly","type":"exact"},{"name":"up-regulation of kinetochore formation","type":"related"},{"name":"upregulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"upregulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"upregulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"upregulation of kinetochore assembly","type":"exact"},{"name":"upregulation of kinetochore formation","type":"related"}],"termid":"GO:1905561","terms_by_termid":{"GO:1905561":null}}


id: FYPO:0004349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methylglyoxal is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to methylglyoxal","synonyms":[{"name":"decreased RNA accumulation during cellular response to methylglyoxal","type":"related"},{"name":"decreased RNA level during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to methylglyoxal during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to methylglyoxal","type":"exact"},{"name":"reduced RNA level during cellular response to methylglyoxal","type":"exact"}],"termid":"FYPO:0004349"}


id: GO:1901832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of all-trans-neoxanthin.","definition_xrefs":["MetaCyc:PWY-6809","PMID:11029576","UniPathway:UPA00388","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"all-trans-neoxanthin metabolic process","termid":"GO:1901831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"all-trans-neoxanthin catabolic process","synonyms":[{"name":"all-trans-neoxanthin breakdown","type":"exact"},{"name":"all-trans-neoxanthin catabolism","type":"exact"},{"name":"all-trans-neoxanthin degradation","type":"exact"},{"name":"neoxanthin breakdown","type":"exact"},{"name":"neoxanthin catabolic process","type":"exact"},{"name":"neoxanthin catabolism","type":"exact"},{"name":"neoxanthin degradation","type":"exact"}],"termid":"GO:1901832"}


id: GO:0070796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cleistothecium development","termid":"GO:0070796"}


id: MONDO:0000090
data:
  {"annotated_genes":["SJAG_02050","SJAG_04816","SJAG_06022","SJAG_00885","SJAG_02658","SJAG_04183","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[86061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[84692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[85063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[85876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[84654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[85947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[85589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia","termid":"MONDO:0005181"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02050":null,"SJAG_02658":null,"SJAG_04183":null,"SJAG_04665":null,"SJAG_04816":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:157640"],"synonyms":[{"name":"progressive external ophthalmoplegia with mtDNA deletions","type":"exact"}],"termid":"MONDO:0000090","terms_by_termid":{"MONDO:0009783":null,"MONDO:0012238":null,"MONDO:0013117":null,"MONDO:0014062":null,"MONDO:0014656":null,"MONDO:0020845":null,"MONDO:0024528":null,"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0000090"}}}


id: MONDO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple congenital anomalies-hypotonia-seizures syndrome (obsolete MONDO:0000142)","termid":"MONDO:0000142","xrefs":{"Monarch":{"xref_id":"0000142"}}}


id: PBO:0080620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 59","termid":"PBO:0080620"}


id: GO:0150031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to lysosome.","definition_xrefs":["GOC:aruk","PMID:24305806","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to lysosome","termid":"GO:0061462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to lysosome","termid":"GO:0150031"}


id: PBO:0089909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3d","termid":"PBO:0089909"}


id: MONDO:0014500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrial conduction disorder is a form of heart disease in which the conduction of the cardiac atrium is disrupted.","definition_xrefs":["EFO:0005304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conduction system disorder","termid":"MONDO:0005449"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial conduction disease","secondary_identifiers":["Orphanet:436242","OMIM:616117","GARD:17729","MEDGEN:863722","UMLS:C4015285"],"synonyms":[{"name":"CARDIAC conduction disease with or without dilated cardiomyopathy","type":"related"},{"name":"CCDD","type":"related"},{"name":"familial atrial tachyarrhythmia-infra-Hisian cardiac conduction disease","type":"related"}],"termid":"MONDO:0014500","xrefs":{"Monarch":{"xref_id":"0014500"}}}


id: PBO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 22","termid":"PBO:0044430"}


id: PBO:0069276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 532, pseudogene","termid":"PBO:0069276"}


id: MONDO:0006953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mother develops antibodies against red blood cell Rhesus antigens. This may lead to potential fetal adverse outcomes such as anemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood group incompatibility","termid":"MONDO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Rh isoimmunization","secondary_identifiers":["MEDGEN:11224","DOID:4175","MedDRA:10039016","SCTID:44795003","EFO:1001159","UMLS:C0035404"],"synonyms":[{"name":"Rh incompatibility affecting management of mother","type":"exact"}],"termid":"MONDO:0006953","xrefs":{"Monarch":{"xref_id":"0006953"}}}


id: PBO:0012539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_acquisition_of_features_of","termid":"PBO:0012539"}


id: PR:P87127
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase mitochondrial F1 complex assembly factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13126:SF0","PRO:DNx","OMA:SCHPO00582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein atp11, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.12","secondary_identifiers":["UniProtKB:P87127"],"synonyms":[{"name":"Spom972h-ATPAF1","type":"exact"}],"termid":"PR:P87127"}


id: GO:0047990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-L-glutamate + H+ = 4-amino-3-hydroxybutanoate + CO2.","definition_xrefs":["EC:4.1.1.16","RHEA:14073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"hydroxyglutamate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R04135","MetaCyc:HYDROXYGLUTAMATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"3-hydroxy-L-glutamate 1-carboxy-lyase (4-amino-3-hydroxybutanoate-forming)","type":"related"},{"name":"3-hydroxy-L-glutamate 1-carboxy-lyase activity","type":"related"}],"termid":"GO:0047990"}


id: PBO:0067396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 502, pseudogene","termid":"PBO:0067396"}


id: MOD:01608
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N2-(L-isoglutamyl)-L-lysine. This is not an isopeptide cross-link.","definition_xrefs":["PubMed:19620981","RESID:AA0505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2-(L-isoglutamyl)-L-lysine","synonyms":[{"name":"(2S)-6-amino-2-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"5-glutamyl N2-lysine","type":"exact"},{"name":"MOD_RES 5-glutamyl N2-lysine","type":"exact"},{"name":"N2-(L-isoglutamyl)-L-lysine","type":"exact"},{"name":"N2-(gamma-glutamyl)lysine","type":"exact"},{"name":"alpha-(gamma-glutamyl)lysine","type":"exact"},{"name":"gamma-glutamyl N2-lysine","type":"exact"}],"termid":"MOD:01608"}


id: PBO:0042911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 8","termid":"PBO:0042911"}


id: PBO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multi copy Suppressor of Chk1","termid":"PBO:0001102"}


id: PBO:0004284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc6","termid":"PBO:0004284"}


id: PBO:0090980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein She9","termid":"PBO:0090980"}


id: PBO:0054997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2412","termid":"PBO:0054997"}


id: PR:Q9P6Q0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med11 gene.","definition_xrefs":["UniProtKB:Q9P6Q0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.10","synonyms":[{"name":"Spom972h-med11","type":"exact"},{"name":"mediator complex subunit 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6Q0"}


id: GO:0106358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + sn-glycerol 1-phosphate = dihydroxyacetone phosphate + H+ + NADPH.","definition_xrefs":["RHEA:21416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-1-phosphate dehydrogenase [NAD(P)+] activity","termid":"GO:0050492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycerol-1-phosphate dehydrogenase (NADP+) activity","synonyms":[{"name":"glycerol-1-phosphate dehydrogenase [NADP+] activity","type":"exact"}],"termid":"GO:0106358"}


id: MONDO:0010104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noneruption of teeth - maxillary hypoplasia - genu valgum is an extremely rare syndrome that is characterized by multiple unerupted permanent teeth, hypoplasia of the alveolar process and of the maxillo-zygomatic region, severe genu valgum and deformed ears.","definition_xrefs":["Orphanet:2972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-eruption of teeth-maxillary hypoplasia-genu valgum syndrome","secondary_identifiers":["SCTID:723442008","GARD:5027","UMLS:C1848903","MEDGEN:341331","OMIM:273050"],"synonyms":[{"name":"Stoelinga de Koomen Davis syndrome","type":"related"},{"name":"Stoelinga-de Koomen-Davis syndrome","type":"exact"},{"name":"multiple non-erupting teeth, maxillo-zygomatical hypoplasia and other congenital defects","type":"related"},{"name":"multiple none-erupting teeth, maxillo-zygomatical hypoplasia and other congenital defects","type":"related"},{"name":"non erupted teeth with maxillary hypoplasia and genu valgum","type":"related"},{"name":"teeth noneruption of with maxillary hypoplasia and genu valgum","type":"related"},{"name":"teeth, noneruption of, with maxillary hypoplasia and genu valgum","type":"related"}],"termid":"MONDO:0010104","xrefs":{"Monarch":{"xref_id":"0010104"}}}


id: PBO:0072594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radical S-adenosyl methionine domain containing 1","termid":"PBO:0072594"}


id: PR:Q9UT81
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NSFL1 cofactor p47 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.09","secondary_identifiers":["UniProtKB:Q9UT81"],"synonyms":[{"name":"Spom972h-NSFL1C","type":"exact"},{"name":"meiotically up-regulated gene 39 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT81"}


id: MONDO:0014587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the MUSK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 9","secondary_identifiers":["DOID:0110670","GARD:16088","MEDGEN:895641","OMIM:616325","UMLS:C4225368"],"synonyms":[{"name":"CMS9","type":"exact"},{"name":"MUSK congenital myasthenic syndrome","type":"exact"},{"name":"congenital myasthenic syndrome 9, associated with acetylcholine receptor deficiency","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in MUSK","type":"exact"},{"name":"congenital myasthenic syndrome type 9","type":"exact"},{"name":"myasthenic syndrome, congenital, 9, associated with acetylcholine receptor deficiency","type":"related"}],"termid":"MONDO:0014587","xrefs":{"Monarch":{"xref_id":"0014587"}}}


id: MONDO:0010673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifier, X-linked, for Neurofunctional defects","secondary_identifiers":["UMLS:C1839708","OMIM:309840","MESH:C564098","MEDGEN:326945"],"synonyms":[{"name":"Tourette syndrome, modifier of","type":"related"},{"name":"modifier, X-linked, for Neurofunctional defects","type":"exact"}],"termid":"MONDO:0010673","xrefs":{"Monarch":{"xref_id":"0010673"}}}


id: PBO:0073852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member 3 pseudogene 2","termid":"PBO:0073852"}


id: PBO:0059877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 14","termid":"PBO:0059877"}


id: PBO:0043905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein LCCL domain containing 2","termid":"PBO:0043905"}


id: GO:0072062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the S1 cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"proximal convoluted tubule segment 1 development","termid":"GO:0072031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal convoluted tubule segment 1 cell differentiation","synonyms":[{"name":"S1 cell differentiation","type":"exact"}],"termid":"GO:0072062"}


id: PBO:0065708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylate synthase 7 pseudogene 1","termid":"PBO:0065708"}


id: MOD:00043
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-phospho-L-cysteine.","definition_xrefs":["PubMed:7961745","PubMed:8128219","Unimod:21#C","PubMed:3142516","RESID:AA0034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated residue","termid":"MOD:00696"},{"relation_name":"is_a","term_name":"residues isobaric at 182.96-182.98 Da","termid":"MOD:00777"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00696","MOD:00905"],"is_obsolete":false,"name":"S-phospho-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(phosphonosulfanyl)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(phosphonosulfanyl)propanoic acid","type":"exact"},{"name":"ACT_SITE Phosphocysteine intermediate","type":"exact"},{"name":"MOD_RES Phosphocysteine","type":"exact"},{"name":"PCys","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"S-phospho-L-cysteine","type":"exact"},{"name":"S-phosphonocysteine","type":"exact"},{"name":"S-phosphorylated L-cysteine","type":"exact"},{"name":"S3-phosphocysteine","type":"exact"},{"name":"cysteine phosphate thioester","type":"exact"}],"termid":"MOD:00043"}


id: MONDO:0035002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete isolated inherited retinal disorder (obsolete MONDO:0035002)","secondary_identifiers":["Orphanet:520817"],"termid":"MONDO:0035002","xrefs":{"Monarch":{"xref_id":"0035002"}}}


id: GO:0052846
data:
  {"annotated_genes":["SJAG_01154","SJAG_00244","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88237,104668,114502],"is_not":false,"summary":null,"term":"GO:0052846"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-bisdiphospho-1D-myo-inositol 2,3,4,6-tetrakisphosphate + H2O = 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate + phosphate + H+.","definition_xrefs":["PMID:11502751","PMID:26422458","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisdiphosphate tetrakisphosphate diphosphatase activity","termid":"GO:0052841"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0101012","MetaCyc:RXN-10965"],"synonyms":[{"name":"inositol 1,5-bisdiphosphate 2,3,4,6-tetrakisphosphate 1-diphosphatase activity","type":"exact"},{"name":"inositol 1,5-bispyrophosphate 2,3,4,6-tetrakisphosphate 1-pyrophosphatase activity","type":"exact"}],"termid":"GO:0052846","terms_by_termid":{"GO:0052846":null}}


id: PBO:0081861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 793","termid":"PBO:0081861"}


id: MONDO:0003942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromophobe renal cell carcinoma","termid":"MONDO:0017885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"eosinophilic variant of chromophobe renal cell carcinoma","secondary_identifiers":["NCIT:C27889","UMLS:C1333405","DOID:6606","MEDGEN:232458"],"synonyms":[{"name":"eosinophilic variant of chromophobe renal cell carcinoma","type":"exact"}],"termid":"MONDO:0003942","xrefs":{"Monarch":{"xref_id":"0003942"}}}


id: PBO:0033750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_regulation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0033750"}


id: PBO:0085038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential component of the HAT-B histone acetyltransferase complex; localized to the nucleus; has a role in telomeric silencing; other members are Hat1p and Hat2p","termid":"PBO:0085038"}


id: FYPO:0005118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a lower extent than normal when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"decreased gene expression during nitrogen starvation","termid":"FYPO:0006550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription during nitrogen starvation","synonyms":[{"name":"decreased transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased transcription during nitrogen depletion","type":"exact"},{"name":"decreased transcription during nitrogen deprivation","type":"exact"},{"name":"decreased transcription during nitrogen limitation","type":"exact"},{"name":"decreased transcription in response to nitrogen starvation","type":"exact"},{"name":"decreased transcriptional response to nitrogen starvation","type":"exact"},{"name":"reduced transcription during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005118"}


id: PBO:0114351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter Dip5","termid":"PBO:0114351"}


id: MONDO:0004958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma arising from the oral cavity. It affects predominantly adults in their fifth and sixth decades of life and is associated with alcohol and tobacco use. Human papillomavirus is present in approximately half of the cases. It is characterized by a tendency to metastasize early to the lymph nodes. When the tumor is small, patients are often asymptomatic. Physical examination may reveal erythematous or white lesions or plaques. The majority of patients present with signs and symptoms of locally advanced disease including mucosal ulceration, pain, difficulty with speaking, chewing, and swallowing, bleeding, weight loss, and neck swelling. Patients may also present with swollen neck lymph nodes without any symptoms from the oropharyngeal tumor. The most significant prognostic factors are the size of the tumor and the lymph nodes status.","definition_xrefs":["NCIT:C4833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lip and oral cavity squamous cell carcinoma","termid":"MONDO:0044710"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"oral cavity squamous cell carcinoma","secondary_identifiers":["MEDGEN:108436","ONCOTREE:OCSC","Orphanet:502363","EFO:0000199","DOID:0050866","GARD:17932","SCTID:307502000","UMLS:C0585362"],"synonyms":[{"name":"OCSC","type":"related"},{"name":"mouth scc","type":"exact"},{"name":"mouth squamous cell carcinoma","type":"exact"},{"name":"oral cavity scc","type":"exact"},{"name":"oral cavity squamous cell cancer","type":"exact"},{"name":"oral cavity squamous cell carcinoma","type":"exact"},{"name":"oral squamous cell carcinoma","type":"related"},{"name":"scc of mouth","type":"exact"},{"name":"scc of oral cavity","type":"exact"},{"name":"scc of the mouth","type":"exact"},{"name":"scc of the oral cavity","type":"exact"},{"name":"squamous cell carcinoma of mouth","type":"exact"},{"name":"squamous cell carcinoma of oral cavity","type":"exact"},{"name":"squamous cell carcinoma of the mouth","type":"exact"},{"name":"squamous cell carcinoma of the oral cavity","type":"exact"}],"termid":"MONDO:0004958","xrefs":{"Monarch":{"xref_id":"0004958"}}}


id: PBO:0055861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 8","termid":"PBO:0055861"}


id: FYPO:0004757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal. May result in re-replication of all or part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation","synonyms":[{"name":"DNA re-replication","type":"related"},{"name":"DNA replication defects, endoreduplication","type":"related"},{"name":"DNA rereplication","type":"related"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0004757"}


id: PBO:0108987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 11","termid":"PBO:0108987"}


id: PR:Q9C0X7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB8E5.08 gene.","definition_xrefs":["UniProtKB:Q9C0X7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein PB8E5.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.08","synonyms":[{"name":"Spom972h-SPAPB8E5.08","type":"exact"}],"termid":"PR:Q9C0X7"}


id: GO:0010489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-4-keto-6-deoxyglucose = UDP-4-keto-rhamnose.","definition_xrefs":["PMID:17190829","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity","termid":"GO:0010489"}


id: MONDO:0009278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperinsulinism due to short chain 3-hydroxylacyl-CoA dehydrogenase deficiency (obsolete MONDO:0009278)","secondary_identifiers":["NANDO:2200516"],"synonyms":[{"name":"SCHAD deficiency, formerly","type":"related"}],"termid":"MONDO:0009278","xrefs":{"Monarch":{"xref_id":"0009278"}}}


id: FYPO:0008324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular phenotype observed in the vegetative growth phase of the life cycle in which the total cytosolic ribosome content (monosomes + polysomes) in a cell is lower than normal.","definition_xrefs":["PMID:39358553","PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytosolic ribosome content","termid":"FYPO:0008324"}


id: GO:0032293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a non-myelinating glial cell membrane encircles an axon in the central nervous system.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-myelinated axon ensheathment","termid":"GO:0032285"},{"relation_name":"is_a","term_name":"axon ensheathment in central nervous system","termid":"GO:0032291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"non-myelinated axon ensheathment in central nervous system","synonyms":[{"name":"ensheathment of non-myelinated axons in central nervous system","type":"exact"}],"termid":"GO:0032293"}


id: MONDO:0014045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Cowden disease in which the cause of the disease is a mutation in the SDHD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"Cowden syndrome 3","secondary_identifiers":["OMIM:615106"],"synonyms":[{"name":"CWS3","type":"related"},{"name":"Cowden disease caused by mutation in SDHD","type":"exact"},{"name":"Cowden syndrome 3","type":"exact"},{"name":"Cowden syndrome type 3","type":"exact"},{"name":"SDHD Cowden disease","type":"exact"}],"termid":"MONDO:0014045","xrefs":{"Monarch":{"xref_id":"0014045"}}}


id: PR:P54069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha/beta hydrolase domain-containing protein 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bem46 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.03","secondary_identifiers":["UniProtKB:P54069"],"synonyms":[{"name":"Spom972h-ABHD13","type":"exact"}],"termid":"PR:P54069"}


id: FYPO:0007913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which organelle localization is normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal organelle localization","termid":"FYPO:0007913"}


id: PR:Q9C0W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A palmitoyltransferase ZDHHC2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase PFA5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.01","secondary_identifiers":["UniProtKB:Q9C0W9"],"synonyms":[{"name":"Spom972h-ZDHHC2","type":"exact"},{"name":"protein fatty acyltransferase 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C0W9"}


id: PBO:0108556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) H3-K9 specific complex subunit Clr6","termid":"PBO:0108556"}


id: PBO:0028363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_cell","termid":"PBO:0028363"}


id: PBO:0082513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the Hat1p-Hat2p histone acetyltransferase complex; uses the cofactor acetyl coenzyme A to acetylate free nuclear and cytoplasmic histone H4; involved in telomeric silencing and DNA double-strand break repair","termid":"PBO:0082513"}


id: PBO:0090615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb1","termid":"PBO:0090615"}


id: PBO:0076237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 6 pseudogene 1","termid":"PBO:0076237"}


id: GO:0070161
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix.","definition_xrefs":["ISBN:0815332181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction","termid":"GO:0030054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"anchoring junction","synonyms":[{"name":"anchoring cell junction","type":"exact"}],"termid":"GO:0070161"}


id: PBO:0034614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_vegetative_cell_with_normal_cell_length","termid":"PBO:0034614"}


id: PBO:0047795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box G1","termid":"PBO:0047795"}


id: PBO:0002487
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.101","termid":"PBO:0002487"}


id: MONDO:0022790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft tongue","secondary_identifiers":["MEDGEN:82731","UMLS:C0266111"],"synonyms":[{"name":"bifid tongue","type":"related"},{"name":"cleft tongue syndrome","type":"related"}],"termid":"MONDO:0022790","xrefs":{"Monarch":{"xref_id":"0022790"}}}


id: PBO:0004095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAF assembly factor (CAF-1) complex large subunit Pcf1","termid":"PBO:0004095"}


id: PBO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEK kinase (MEKK) Mkh1","termid":"PBO:0000485"}


id: PBO:0057479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 598","termid":"PBO:0057479"}


id: MONDO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal microaneurysm","secondary_identifiers":["DOID:11295","ICD9:362.14","SCTID:34037000","UMLS:C0154834","MEDGEN:472899"],"termid":"MONDO:0001257","xrefs":{"Monarch":{"xref_id":"0001257"}}}


id: PBO:0069460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 725, pseudogene","termid":"PBO:0069460"}


id: MONDO:0017616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Schutz type","secondary_identifiers":["Orphanet:3062"],"termid":"MONDO:0017616","xrefs":{"Monarch":{"xref_id":"0017616"}}}


id: FYPO:0003151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to heat is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level during cellular response to heat","synonyms":[{"name":"decreased protein accumulation during cellular response to heat","type":"related"},{"name":"decreased protein level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to heat during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to heat","type":"exact"},{"name":"thermo-sensitive","type":"related"},{"name":"thermosensitive","type":"related"}],"termid":"FYPO:0003151"}


id: MONDO:0004357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma of the larynx that arises from the supraglottic area.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supraglottis cancer","termid":"MONDO:0001724"},{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of supraglottis","secondary_identifiers":["NCIT:C5973","SCTID:372105009","MEDGEN:266243","UMLS:C1299240","DOID:7763"],"synonyms":[{"name":"cancer of supraglottis","type":"exact"},{"name":"cancer of the supraglottis","type":"exact"},{"name":"carcinoma of supraglottic part of larynx","type":"exact"},{"name":"carcinoma of supraglottis","type":"exact"},{"name":"carcinoma of the supraglottis","type":"exact"},{"name":"supraglottic cancer","type":"exact"},{"name":"supraglottic carcinoma","type":"exact"},{"name":"supraglottic part of larynx carcinoma","type":"exact"},{"name":"supraglottic throat cancer","type":"exact"},{"name":"supraglottis carcinoma","type":"exact"}],"termid":"MONDO:0004357","xrefs":{"Monarch":{"xref_id":"0004357"}}}


id: GO:0055049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart, in the presence of centrosomes.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete astral spindle assembly (obsolete GO:0055049)","termid":"GO:0055049"}


id: PBO:0041836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 16","termid":"PBO:0041836"}


id: MONDO:0011010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Matthew-Wood syndrome is a rare clinical entity including as main characteristics anophthalmia or severe microphthalmia, and pulmonary hypoplasia or aplasia.","definition_xrefs":["Orphanet:2470"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Matthew-Wood syndrome","secondary_identifiers":["GARD:713","MESH:C537768","DOID:0111807","OMIM:601186","SCTID:722458000","DOID:0050819","UMLS:C1832661","MEDGEN:318679"],"synonyms":[{"name":"MCOPS9","type":"exact"},{"name":"Matthew Wood syndrome","type":"related"},{"name":"Matthew-Wood syndrome","type":"exact"},{"name":"anophthalmia, clinical, with mild Facial Dysmorphism and variable malformations of the lung, heart, and diaphragm","type":"related"},{"name":"anophthalmia-pulmonary hypoplasia syndrome","type":"exact"},{"name":"anophthalmia/microphthalmia and pulmonary hypoplasia","type":"related"},{"name":"clinical anophthalmia mild facial dysmorphism lung heart and diaphragm malformations","type":"related"},{"name":"microphthalmia syndromic 9","type":"related"},{"name":"microphthalmia syndromic type 9","type":"exact"},{"name":"microphthalmia, isolated, with coloboma 8","type":"related"},{"name":"microphthalmia, syndromic 9","type":"related"},{"name":"microphthalmia, syndromic type 9","type":"exact"},{"name":"pulmonary Hypoplasia-diaphragmatic hernia-anophthalmia-Cardiac defect","type":"related"},{"name":"pulmonary agenesis microphthalmi and diaphragmatic defect","type":"related"},{"name":"pulmonary agenesis, microphthalmia, and diaphragmatic defect","type":"related"},{"name":"spear syndrome","type":"related"},{"name":"syndromic microphthalmia type 9","type":"exact"}],"termid":"MONDO:0011010","xrefs":{"Monarch":{"xref_id":"0011010"}}}


id: GO:0009894
data:
  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id: GO:0010274
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id: FYPO:0007901
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id: GO:0002881
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id: GO:0006696
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id: PBO:0057992
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id: GO:2000368
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id: GO:0018178
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id: PBO:0041136
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id: PBO:0063904
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id: FYPO:0004466
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id: PBO:0034650
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id: PBO:0091738
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id: SO:0000057
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id: GO:0030773
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id: GO:0008583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an undifferentiated cell acquires the features of a mystery cell. The mystery cells are a precluster of cells that emerge from the compound eye morphogenetic furrow, normally positioned between R3 and R4. They then disappear into the surrounding pool of undifferentiated cells and have no known fate in the mature ommatidium. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0632030488","PMID:1295747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mystery cell differentiation","termid":"GO:0008583"}


id: PATO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's consisting a knot-like mass.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodular","termid":"PATO:0002125"}


id: PBO:0086555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGR039W is not an essential gene","termid":"PBO:0086555"}


id: GO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pronucleus originating from the spermatozoa that was involved in fertilization.","definition_xrefs":["ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronucleus","termid":"GO:0045120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"male pronucleus","termid":"GO:0001940"}


id: MONDO:0100316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 1","secondary_identifiers":["OMIM:192500","NCIT:C85049","DOID:0110644","UMLS:C4551647","MedDRA:10039211","MEDGEN:1641146","SCTID:20852007"],"synonyms":[{"name":"LQT1","type":"exact"},{"name":"long QT syndrome 1","type":"exact"},{"name":"long QT syndrome 1, acquired, susceptibility to","type":"related"},{"name":"long QT syndrome 1/2, digenic","type":"related"},{"name":"long QT syndrome type 1","type":"exact"},{"name":"ventricular fibrillation with prolonged QT interval","type":"exact"}],"termid":"MONDO:0100316","xrefs":{"Monarch":{"xref_id":"0100316"}}}


id: GO:0102573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-[(1-carboxylatovinyl)oxy]benzoate(2-) + S-adenosyl-L-methionine + H2O = aminodeoxyfutalosinate + L-methionine + hydrogencarbonate + H+.","definition_xrefs":["EC:2.5.1.120","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"aminodeoxyfutalosine synthase activity","secondary_identifiers":["MetaCyc:RXN-15264","RHEA:33075"],"termid":"GO:0102573"}


id: PBO:0048637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 6, pseudogene","termid":"PBO:0048637"}


id: PBO:0070120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 34 pseudogene","termid":"PBO:0070120"}


id: MONDO:0850054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemophilia B leyden","secondary_identifiers":["Orphanet:617930","GARD:22455"],"termid":"MONDO:0850054","xrefs":{"Monarch":{"xref_id":"0850054"}}}


id: PBO:0088040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme; most similar in sequence to Xenopus ubiquitin-conjugating enzyme E2-C, but not a true functional homolog of this E2; unlike E2-C, not required for the degradation of mitotic cyclin Clb2","termid":"PBO:0088040"}


id: PBO:0061827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 17","termid":"PBO:0061827"}


id: PBO:0048908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member C, pseudogene","termid":"PBO:0048908"}


id: PBO:0116276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic delta 1-pyrroline-5-carboxylate reductase; catalyzes the last step in proline biosynthesis","termid":"PBO:0116276"}


id: MONDO:0005553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete parathyroid disease (obsolete MONDO:0005553)","termid":"MONDO:0005553","xrefs":{"Monarch":{"xref_id":"0005553"}}}


id: MONDO:0005569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Softening and degeneration of the CARTILAGE. Pathological processes involving the chondral tissue (CARTILAGE).","definition_xrefs":["EFO:0005802"],"gene_count":0,"genotype_count":0,"name":"obsolete cartilage disease (obsolete MONDO:0005569)","secondary_identifiers":["ICD9:733.99","SCTID:50927007","DOID:1222","MESH:D002357"],"synonyms":[{"name":"cartilage disorder","type":"exact"},{"name":"cartilage tissue disease","type":"exact"},{"name":"cartilage tissue disease or disorder","type":"exact"},{"name":"chondropathy","type":"exact"},{"name":"disease of cartilage tissue","type":"exact"},{"name":"disease or disorder of cartilage tissue","type":"exact"},{"name":"disorder of cartilage tissue","type":"exact"}],"termid":"MONDO:0005569","xrefs":{"Monarch":{"xref_id":"0005569"}}}


id: PBO:0069074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 321, pseudogene","termid":"PBO:0069074"}


id: PBO:0016994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR3","termid":"PBO:0016994"}


id: GO:0035066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the addition of an acetyl group to a histone protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone acetylation (obsolete GO:0035066)","synonyms":[{"name":"activation of histone acetylation","type":"narrow"},{"name":"stimulation of histone acetylation","type":"narrow"},{"name":"up regulation of histone acetylation","type":"exact"},{"name":"up-regulation of histone acetylation","type":"exact"},{"name":"upregulation of histone acetylation","type":"exact"}],"termid":"GO:0035066"}


id: FYPO:0004721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which minus-end specific microtubule depolymerization, i.e. the removal of tubulin dimers from the minus end of a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0036078"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased rate of microtubule depolymerization at minus end (obsolete FYPO:0004721)","synonyms":[{"name":"decreased microtubule depolymerization rate at minus end","type":"exact"},{"name":"decreased microtubule minus end shrinkage","type":"related"},{"name":"decreased rate of microtubule catastrophe at minus end","type":"related"},{"name":"decreased rate of microtubule depolymerisation at minus end","type":"exact"},{"name":"decreased rate of microtubule depolymerization at minus end during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule depolymerization at minus end during vegetative growth","type":"exact"},{"name":"decreased rate of minus-end specific microtubule depolymerization","type":"exact"},{"name":"increased microtubule stability","type":"related"},{"name":"reduced rate of microtubule depolymerization at minus end","type":"exact"}],"termid":"FYPO:0004721"}


id: PBO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR protein-specific kinase Dsk1","termid":"PBO:0003355"}


id: PBO:0064306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"procollagen-lysine,2-oxoglutarate 5-dioxygenase 1","termid":"PBO:0064306"}


id: MONDO:1010282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Azoospermia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azoospermia, non-human animal","secondary_identifiers":["OMIA:002500"],"termid":"MONDO:1010282","xrefs":{"Monarch":{"xref_id":"1010282"}}}


id: PBO:0002172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit A/ SAGA complex subunit","termid":"PBO:0002172"}


id: PBO:0031624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_sporulation","termid":"PBO:0031624"}


id: PBO:0002882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid1","termid":"PBO:0002882"}


id: PBO:0065244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 15 like","termid":"PBO:0065244"}


id: GO:0030616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A TGF-beta cytoplasmic mediator that forms a complex with a phosphorylated pathway-specific mediator. The heterocomplex translocates to the nucleus to regulate transcription.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, common-partner cytoplasmic mediator activity (obsolete GO:0030616)","synonyms":[{"name":"TGF-beta receptor, common-partner cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, common-partner cytoplasmic mediator activity","type":"exact"},{"name":"co-SMAD protein","type":"related"},{"name":"common mediator SMAD protein","type":"related"},{"name":"common partner SMAD protein","type":"related"},{"name":"common-mediator SMAD protein","type":"related"},{"name":"common-partner SMAD protein","type":"related"}],"termid":"GO:0030616"}


id: GO:0031673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A relatively pale zone traversing the center of the A band of a sarcomere, visible in relaxed muscle fibers; consists of the central portion of thick (myosin) filaments that are not overlapped by thin (actin) filaments.","definition_xrefs":["GOC:mtg_muscle","ISBN:0321204131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A band","termid":"GO:0031672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"H zone","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"H band","type":"exact"},{"name":"H disc","type":"exact"}],"termid":"GO:0031673"}


id: MONDO:0004709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a occipital lobe.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of cerebral hemisphere","termid":"MONDO:0021374"},{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occipital lobe neoplasm","secondary_identifiers":["DOID:910","ICD10CM:C71.4","NCIT:C5574","SCTID:126957005","ICD9:191.4","MEDGEN:220389","UMLS:C1263889"],"synonyms":[{"name":"malignant neoplasm of occipital lobe","type":"exact"},{"name":"neoplasm of occipital lobe","type":"exact"},{"name":"neoplasm of the occipital lobe","type":"exact"},{"name":"occipital lobe neoplasm","type":"exact"},{"name":"occipital lobe neoplasm (disease)","type":"exact"},{"name":"occipital lobe tumor","type":"exact"},{"name":"occipital lobe tumour","type":"exact"},{"name":"tumor of occipital lobe","type":"exact"},{"name":"tumor of the occipital lobe","type":"exact"},{"name":"tumour of occipital lobe","type":"exact"},{"name":"tumour of the occipital lobe","type":"exact"}],"termid":"MONDO:0004709","xrefs":{"Monarch":{"xref_id":"0004709"}}}


id: PATO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer being suitable for use as food.","definition_xrefs":["PATOC:VO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"edibility","termid":"PATO:0002138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edible","termid":"PATO:0002139"}


id: FYPO:0001120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a pear in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pear-shaped cell","termid":"FYPO:0000020"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"pear-shaped vegetative cell","synonyms":[{"name":"cell morphology, pear shaped during vegetative growth","type":"exact"},{"name":"ice cream cone-shaped cell during vegetative growth","type":"exact"},{"name":"pear-shaped cell during vegetative growth","type":"exact"},{"name":"pear-shaped vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001120"}


id: GO:0045550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of phytyl group from the stepwise reduction of a geranylgeranyl group.","definition_xrefs":["PMID:9492312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"geranylgeranyl reductase activity","termid":"GO:0045550"}


id: PBO:0066825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 124","termid":"PBO:0066825"}


id: GO:0010541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin from the base towards the apex of an organ, including the shoot, leaf, primary root, or lateral root.","definition_xrefs":["PMID:10677441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"acropetal auxin transport","termid":"GO:0010541"}


id: PBO:0036368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT complex RNA-binding protein subunit Rcd1","termid":"PBO:0036368"}


id: PBO:0027871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_methylated_histone_binding","termid":"PBO:0027871"}


id: GO:0051421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of endo-(1->4)-beta-xylanase activity, the catalysis of the endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.","definition_xrefs":["EC:3.2.1.8","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of endo-1,4-beta-xylanase activity (obsolete GO:0051421)","synonyms":[{"name":"endo-1,4-beta-xylanase regulator","type":"related"},{"name":"xylanase regulator","type":"related"}],"termid":"GO:0051421"}


id: FYPO:0007938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tea tree oil. Cells stop growing (and may die) at a concentration of tea tree oil that allows wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to tea tree oil","termid":"FYPO:0007938"}


id: GO:1905548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["GOC:nc","PMID:25819580","GO_REF:0000058","GOC:BHF_telomere","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of subtelomeric heterochromatin assembly (obsolete GO:1905548)","synonyms":[{"name":"down regulation of telomeric heterochromatin assembly","type":"related"},{"name":"down regulation of telomeric heterochromatin formation","type":"related"},{"name":"down-regulation of telomeric heterochromatin assembly","type":"related"},{"name":"down-regulation of telomeric heterochromatin formation","type":"related"},{"name":"downregulation of telomeric heterochromatin assembly","type":"related"},{"name":"downregulation of telomeric heterochromatin formation","type":"related"},{"name":"inhibition of telomeric heterochromatin assembly","type":"narrow"},{"name":"inhibition of telomeric heterochromatin formation","type":"narrow"},{"name":"negative regulation of telomeric heterochromatin assembly","type":"related"},{"name":"negative regulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905548"}


id: PBO:0041559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 53","termid":"PBO:0041559"}


id: PBO:0061928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily J member 2","termid":"PBO:0061928"}


id: GO:0045071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral genome replication","termid":"GO:0045069"},{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"negatively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral genome replication","synonyms":[{"name":"down regulation of viral genome replication","type":"exact"},{"name":"down-regulation of viral genome replication","type":"exact"},{"name":"downregulation of viral genome replication","type":"exact"},{"name":"inhibition of viral genome replication","type":"narrow"}],"termid":"GO:0045071"}


id: GO:0070453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"regulation of heme biosynthetic process","synonyms":[{"name":"regulation of haem biosynthesis","type":"exact"},{"name":"regulation of haem biosynthetic process","type":"exact"},{"name":"regulation of heme anabolism","type":"exact"},{"name":"regulation of heme biosynthesis","type":"exact"},{"name":"regulation of heme formation","type":"exact"},{"name":"regulation of heme synthesis","type":"exact"}],"termid":"GO:0070453"}


id: MONDO:0001427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dieulafoy lesion is an abnormally large artery (a vessel that takes blood from the heart to other areas of the body) in the lining of the gastrointestinal system. It is most common in the stomach but can occur in other locations, including the small and large intestine. Dieulafoy lesions can cause severe and sudden gastrointestinal bleeding. The condition occurs in people of all ages, but is more common in males than in females.Depending upon the site of the bleeding, symptoms may include vomiting up blood (hematemesis); sticky, dark-colored stools (melena); passage of fresh blood in the stool (hematochezia); or coughing up blood (hemoptysis). Some affected individuals may only present with blood pressure problems. Treatment may include endoscopic and/or surgical techniques. Though treatment can be effective, Dieulafoy lesions and the associated blood loss can be fatal, especially if not diagnosed and treated promptly.","direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Dieulafoy lesion","secondary_identifiers":["MEDGEN:574250","DOID:12070","ICD10CM:K31.82","ICD9:537.84","SCTID:109558001","UMLS:C0341217"],"synonyms":[{"name":"Dieulafoy disease","type":"related"},{"name":"Dieulafoy lesion (hemorrhagic) of intestine","type":"exact"},{"name":"Dieulafoy lesion (hemorrhagic) of stomach and duodenum","type":"exact"},{"name":"Dieulafoy's lesion","type":"related"},{"name":"Exulceratio simplex Dieulafoy","type":"related"}],"termid":"MONDO:0001427","xrefs":{"Monarch":{"xref_id":"0001427"}}}


id: GO:0007553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development, including the metamorphosis of immature forms and the development of the reproductive system and the maturation of oocytes in adult females.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of ecdysteroid metabolic process","synonyms":[{"name":"regulation of ecdysteroid metabolism","type":"exact"}],"termid":"GO:0007553"}


id: MONDO:0020384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Niemann-Pick disease, type E is a poorly defined adult-onset and non-neuronopathic form of Niemann-Pick disease.","definition_xrefs":["Orphanet:99022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Niemann-Pick disease","termid":"MONDO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005046","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"Niemann-Pick disease type E","secondary_identifiers":["UMLS:C0268248","SCTID:73399005","MEDGEN:82781"],"termid":"MONDO:0020384","xrefs":{"Monarch":{"xref_id":"0020384"}}}


id: PBO:0030224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_morphology_during_vegetative_growth","termid":"PBO:0030224"}


id: MONDO:0012706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A temporal lobe epilepsy characterized by autosomal dominant inheritance of occipitotemporal lobe epilepsy and migraine with visual aura and that has material basis in variation in the chromosome region 9q21-q22.","definition_xrefs":["DOID:0060753","PMID:17460155","PMID:18332351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial temporal lobe epilepsy 4","secondary_identifiers":["GARD:15523","UMLS:C1968847","OMIM:611631","MEDGEN:368897","MESH:C566902"],"synonyms":[{"name":"EPOLM","type":"related"},{"name":"ETL4","type":"exact"},{"name":"epilepsy, familial temporal lobe, 4","type":"related"},{"name":"epilepsy, occipitotemporal lobe, and migraine with aura","type":"related"},{"name":"familial temporal lobe epilepsy type 4","type":"exact"},{"name":"occipitotemporal lobe epilepsy and migraine with aura","type":"related"}],"termid":"MONDO:0012706","xrefs":{"Monarch":{"xref_id":"0012706"}}}


id: PBO:0089978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone, FACT complex subunit Pob3","termid":"PBO:0089978"}


id: MONDO:0012879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation on chromosome 2q32.1.","definition_xrefs":["DOID:0070090"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"schizophrenia","termid":"MONDO:0005090"},{"relation_name":"is_a","term_name":"schizophrenia, susceptibility to","termid":"MONDO:0100182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia 14","secondary_identifiers":["OMIM:612361","UMLS:C2677614","MEDGEN:436991"],"synonyms":[{"name":"SCZD14","type":"exact"},{"name":"Sczd14","type":"related"},{"name":"schizophrenia 14","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 2Q32-related","type":"related"},{"name":"schizophrenia type 14","type":"exact"},{"name":"schizophrenia, susceptibility to, 14","type":"exact"}],"termid":"MONDO:0012879","xrefs":{"Monarch":{"xref_id":"0012879"}}}


id: PBO:0062832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odd-skipped related transciption factor 2","termid":"PBO:0062832"}


id: GO:0051332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S phase","termid":"GO:0051320"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051328"}],"interesting_parent_ids":["GO:0051328","GO:0008150"],"is_obsolete":false,"name":"meiotic S phase","synonyms":[{"name":"S phase of meiotic cell cycle","type":"exact"},{"name":"S-phase of meiotic cell cycle","type":"exact"},{"name":"premeiotic S-phase","type":"exact"}],"termid":"GO:0051332"}


id: PBO:0062359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily S member 1","termid":"PBO:0062359"}


id: PBO:0060524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl-tRNA synthetase 1 pseudogene 2","termid":"PBO:0060524"}


id: PBO:0045053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEU1 antisense RNA 1","termid":"PBO:0045053"}


id: GO:0022003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals that stops, prevents or reduces the frequency or rate at which cell adopts an anterior neural cell fate, generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph","GOC:tb","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of anterior neural cell fate commitment of the neural plate","termid":"GO:0022001"},{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of anterior neural cell fate commitment of the neural plate by fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"fgf receptor signaling involved in down regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"fgf receptor signaling involved in down-regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"fgf receptor signaling involved in downregulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"fgf receptor signaling involved in inhibition of anterior neural cell fate of the neural plate","type":"narrow"},{"name":"fgf receptor signaling involved in negative regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"fgf receptor signalling involved in negative regulation of anterior neural cell fate of the neural plate","type":"exact"}],"termid":"GO:0022003"}


id: GO:0055066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent or trivalent cations within an organism or cell.","definition_xrefs":["GOC:ceb","GOC:mah","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete di-, tri-valent inorganic cation homeostasis (obsolete GO:0055066)","synonyms":[{"name":"di-, tri-valent inorganic cation homeostasis","type":"exact"}],"termid":"GO:0055066"}


id: PBO:0075916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 8","termid":"PBO:0075916"}


id: MOD:00082
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to pros-methyl-L-histidine (N-pi-methyl-L-histidine, 3'-methyl-L-histidine).","definition_xrefs":["PubMed:8076","PubMed:8645219","PubMed:11875433","PubMed:3467365","PubMed:6692818","RESID:AA0073","PubMed:10660523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated L-histidine","termid":"MOD:00724"},{"relation_name":"is_a","term_name":"monomethylated L-histidine","termid":"MOD:02038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"3'-methyl-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(3-methyl-3H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1-methylhistidine","type":"related"},{"name":"3'-methyl-L-histidine","type":"exact"},{"name":"MOD_RES Pros-methylhistidine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(delta)-methylhistidine","type":"exact"},{"name":"N(pi)-methylhistidine","type":"exact"},{"name":"NpMeHis","type":"exact"},{"name":"pros-methylated L-histidine","type":"exact"},{"name":"pros-methylhistidine","type":"exact"}],"termid":"MOD:00082"}


id: SO:0000740
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a plastid such as a chloroplast.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_sequence","synonyms":[{"name":"plastid sequence","type":"exact"}],"termid":"SO:0000740"}


id: PR:Q96WV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An androgen-induced gene 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0641 membrane protein PJ4664.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.05","secondary_identifiers":["UniProtKB:Q96WV4"],"synonyms":[{"name":"Spom972h-AIG1","type":"exact"}],"termid":"PR:Q96WV4"}


id: GO:0099402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a plant organ, a multi-tissue plant structure that forms a functional unit.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant organ development","synonyms":[{"name":"development of a plant organ","type":"exact"}],"termid":"GO:0099402"}


id: PBO:0059501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded 7S DNA","termid":"PBO:0059501"}


id: PBO:0004609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp2","termid":"PBO:0004609"}


id: PBO:0049524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.X variant histone","termid":"PBO:0049524"}


id: GO:0102191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-carboxy-4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NAD+ = CO2 + cycloeucalenone + NADH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase (decarboxylating) (NAD+) activity (obsolete GO:0102191)","synonyms":[{"name":"3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase (decarboxylating) (NAD+) activity","type":"exact"},{"name":"4alpha-carboxy-5alpha-cholesta-7,24-dien-3beta-ol dehydrogenase/C4-decarboxylase activity","type":"exact"}],"termid":"GO:0102191"}


id: MONDO:0100574
data:
  {"annotated_genes":["SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014517"}]},"cv_name":"mondo","definition":"Epilepsy that is characterized by generalized seizure types and may have typical interictal and/or ictal EEG findings that accompany generalized seizure types (for example generalized spike-wave).","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3021"],"termid":"MONDO:0100574","terms_by_termid":{"MONDO:0014517":null},"xrefs":{"Monarch":{"xref_id":"0100574"}}}


id: FYPO:0004405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to JM335. Cells stop growing (and may die) at a concentration of JM335 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to JM335","synonyms":[{"name":"hypersensitive to JM335","type":"exact"},{"name":"sensitive to JM335 during mitotic cell cycle","type":"related"},{"name":"sensitive to JM335 during vegetative growth","type":"exact"}],"termid":"FYPO:0004405"}


id: PBO:0056227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member F1","termid":"PBO:0056227"}


id: PR:Q9HDV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine-specific demethylase 5A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lid2 complex component lid2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.06","secondary_identifiers":["UniProtKB:Q9HDV4"],"synonyms":[{"name":"Lid2C component lid2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBP19A11.06","type":"related"},{"name":"Spom972h-KDM5A","type":"exact"}],"termid":"PR:Q9HDV4"}


id: PBO:0028181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_selenite_ion","termid":"PBO:0028181"}


id: GO:0071346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon gamma is the only member of the type II interferon found so far.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to type II interferon","termid":"GO:0034341"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to type II interferon","synonyms":[{"name":"cellular response to gamma-interferon","type":"related"},{"name":"cellular response to immune interferon","type":"exact"},{"name":"cellular response to interferon-gamma","type":"broad"},{"name":"cellular response to type II IFN","type":"broad"}],"termid":"GO:0071346"}


id: MONDO:0002645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the cerebrum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebritis","secondary_identifiers":["UMLS:C0742115","NCIT:C27199","DOID:3431","MEDGEN:149273"],"synonyms":[{"name":"cerebral hemisphere inflammation","type":"exact"},{"name":"inflammation of cerebral hemisphere","type":"exact"}],"termid":"MONDO:0002645","xrefs":{"Monarch":{"xref_id":"0002645"}}}


id: PBO:0072881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding factor 1","termid":"PBO:0072881"}


id: PBO:0038575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abraxas 1, BRCA1 A complex subunit","termid":"PBO:0038575"}


id: PATO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity toward an external stimulus which is higher than normal/average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitive toward","termid":"PATO:0000516"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased sensitivity toward","synonyms":[{"name":"high sensitivity toward","type":"exact"},{"name":"increased sensitivity","type":"exact"}],"termid":"PATO:0001549"}


id: PBO:0055279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2706","termid":"PBO:0055279"}


id: GO:0150102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte activation.","definition_xrefs":["GOC:aruk","PMID:15597323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"negatively_regulates","term_name":"monocyte activation","termid":"GO:0042117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte activation","synonyms":[{"name":"repression of monocyte activation","type":"exact"}],"termid":"GO:0150102"}


id: PBO:0005877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase 1 (predicted)","termid":"PBO:0005877"}


id: PBO:0109296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRP2 antisense RNA 1","termid":"PBO:0109296"}


id: GO:1905052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of base-excision repair.","definition_xrefs":["PMID:18973764","GO_REF:0000058","GOC:ah","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of base-excision repair","termid":"GO:1905051"},{"relation_name":"negatively_regulates","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"negative regulation of base-excision repair","synonyms":[{"name":"down regulation of BER","type":"exact"},{"name":"down regulation of base-excision repair","type":"exact"},{"name":"down-regulation of BER","type":"exact"},{"name":"down-regulation of base-excision repair","type":"exact"},{"name":"downregulation of BER","type":"exact"},{"name":"downregulation of base-excision repair","type":"exact"},{"name":"inhibition of BER","type":"narrow"},{"name":"inhibition of base-excision repair","type":"narrow"},{"name":"negative regulation of BER","type":"exact"}],"termid":"GO:1905052"}


id: PBO:0066610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1 pseudogene 1","termid":"PBO:0066610"}


id: PBO:0077466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 185B","termid":"PBO:0077466"}


id: MONDO:0006143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma arising from the cervical epithelium. It usually evolves from a precancerous cervical lesion. Increased numbers of sexual partners and human papillomavirus (HPV) infection are risk factors for cervical squamous cell carcinoma. The following histologic patterns have been described: conventional squamous cell carcinoma, papillary squamous cell carcinoma, transitional cell carcinoma, lymphoepithelioma-like carcinoma, verrucous carcinoma, condylomatous carcinoma and spindle cell carcinoma. Survival is most closely related to the stage of disease at the time of diagnosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"cervical carcinoma","termid":"MONDO:0005131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical squamous cell carcinoma","secondary_identifiers":["UMLS:C0279671","MEDGEN:124644","ONCOTREE:CESC","SCTID:254886006","NCIT:C4028","EFO:1000172","Orphanet:213767","GARD:20487","ICD10CM:C53.0","DOID:3744","icd11.foundation:1544785014"],"synonyms":[{"name":"CESC","type":"related"},{"name":"cervical squamous cell cancer","type":"exact"},{"name":"cervical squamous cell carcinoma","type":"exact"},{"name":"cervix squamous cell carcinoma","type":"exact"},{"name":"cervix uteri squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of cervix","type":"exact"},{"name":"squamous cell carcinoma of cervix uteri","type":"exact"},{"name":"squamous cell carcinoma of the cervix","type":"exact"},{"name":"squamous cell carcinoma of the cervix uteri","type":"exact"},{"name":"squamous cell carcinoma of the uterine cervix","type":"exact"},{"name":"squamous cell carcinoma of uterine cervix","type":"exact"},{"name":"squamous cervical cancer","type":"exact"},{"name":"uterine cervix squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006143","xrefs":{"Monarch":{"xref_id":"0006143"}}}


id: MONDO:0003691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymoma occurring in children.","definition_xrefs":["NCIT:C8097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesenchymoma","termid":"MONDO:0003633"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood malignant mesenchymoma","secondary_identifiers":["DOID:5893","UMLS:C0279991","MEDGEN:124688"],"synonyms":[{"name":"childhood malignant mesenchymoma","type":"exact"},{"name":"malignant mesenchymoma","type":"broad"},{"name":"malignant mesenchymoma of childhood","type":"exact"},{"name":"paediatric malignant mesenchymoma","type":"exact"},{"name":"pediatric malignant mesenchymoma","type":"exact"}],"termid":"MONDO:0003691","xrefs":{"Monarch":{"xref_id":"0003691"}}}


id: PBO:0000217
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during M-G1 phase","termid":"PBO:0000217"}


id: MONDO:0045070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from any part of the digestive system.","definition_xrefs":["NCIT:C7091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"non-cutaneous melanoma","termid":"MONDO:0006320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"digestive system melanoma","secondary_identifiers":["MEDGEN:234305","UMLS:C1333798"],"synonyms":[{"name":"digestive system melanoma","type":"exact"},{"name":"digestive system melanoma (disease)","type":"exact"},{"name":"gastrointestinal melanoma","type":"exact"},{"name":"melanoma (disease) of digestive system","type":"exact"}],"termid":"MONDO:0045070","xrefs":{"Monarch":{"xref_id":"0045070"}}}


id: GO:1902323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methyl-branched fatty acid biosynthetic process.","definition_xrefs":["PMID:15340492","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"is_a","term_name":"regulation of methyl-branched fatty acid biosynthetic process","termid":"GO:1902322"},{"relation_name":"negatively_regulates","term_name":"methyl-branched fatty acid biosynthetic process","termid":"GO:1902321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"down regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"down regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"down regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"down regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"down regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"downregulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"downregulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"downregulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"downregulation of methyl-branched fatty acid formation","type":"exact"},{"name":"downregulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"inhibition of methyl-branched fatty acid anabolism","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid biosynthesis","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid biosynthetic process","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid formation","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid synthesis","type":"narrow"},{"name":"negative regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"negative regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"negative regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"negative regulation of methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902323"}


id: MONDO:0004836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare self-limiting, rapidly growing, non-encapsulated benign neoplasm that arises from the vessels. It is characterized by the presence of plump spindle-shaped fibroblasts, multinucleated osteoclast-like giant cells, chronic inflammatory infiltrate, red blood cell extravasation, and high mitotic activity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nodular fasciitis","termid":"MONDO:0004187"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intravascular fasciitis","secondary_identifiers":["NCIT:C4729","SCTID:254738007","MEDGEN:140942","ICD9:728.79","UMLS:C0432529","DOID:9603"],"synonyms":[{"name":"intravascular nodular fasciitis","type":"exact"},{"name":"intravascular pseudosarcomatous fasciitis","type":"exact"}],"termid":"MONDO:0004836","xrefs":{"Monarch":{"xref_id":"0004836"}}}


id: GO:0098512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a humidity stimulus is received and converted into a molecular signal as part of the sensory perception of humidity.","definition_xrefs":["PMID:8650222","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"},{"relation_name":"part_of","term_name":"sensory perception of humidity","termid":"GO:0098509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of humidity stimulus involved in sensory perception","termid":"GO:0098512"}


id: SO:0002360
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for cytosolic rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_gene","termid":"SO:0002360"}


id: FYPO:0001357
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118761,118764,118760,118762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"}],"single_locus_phenotype":[{"annotations":[118868,118921,118922,118923],"is_not":false,"summary":null,"term":"FYPO:0001357"},{"annotations":[118634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grows normally (i.e. indistinguishably from wild type) in the vegetative growth phase of the life cycle. Cell population growth refers to an increase in the number of cells in the population as individual cells grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"},{"relation_name":"is_a","term_name":"vegetative cell population growth phenotype","termid":"FYPO:0001358"},{"relation_name":"is_a","term_name":"viable vegetative cell population","termid":"FYPO:0002060"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_00601":null,"SJAG_01355":null,"SJAG_01946":null,"SJAG_03198":null,"SJAG_03575":null,"SJAG_03720":null},"genotype_count":8,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta":{"display_name":"apc2-361(E548K ts) cem1delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts) oar2-51(Y189D cold sensitive)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"apc2-361(E548K ts) oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta":{"display_name":"apc2-361(E548K ts) oar2delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03198","SJAG_03575","SJAG_01946"],"name":"normal vegetative cell population growth","references_by_uniquename":{"PMID:23090706":null,"PMID:23786411":null,"PMID:25318672":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_03720","SJAG_01355","SJAG_00426","SJAG_00601"],"single_locus_genotype_uniquenames":["rip1delta","cox6delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","tel1delta"],"synonyms":[{"name":"vegetative growth normal","type":"broad"},{"name":"vegetative population growth normal","type":"exact"}],"termid":"FYPO:0001357","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000674":null,"FYPO:0001357":null,"FYPO:0001690":null}}


id: PBO:0089640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox14","termid":"PBO:0089640"}


id: MONDO:0021739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A name applied to several itchy skin eruptions of unknown cause. The characteristic course is the formation of a dome-shaped papule with a small transient vesicle on top, followed by crusting over or lichenification. (From Dorland, 27th ed)","definition_xrefs":["MESH:D011536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"prurigo","secondary_identifiers":["icd11.foundation:268810206","ICD9:698.2","UMLS:C0033771","SCTID:64144002","MEDGEN:10986","ICD9:698.8"],"synonyms":[{"name":"Itchy skin eruption","type":"related"},{"name":"Prurigo","type":"related"},{"name":"Pruritic rash","type":"related"},{"name":"itchy skin eruption","type":"related"},{"name":"prurigo","type":"exact"},{"name":"pruritic rash","type":"exact"}],"termid":"MONDO:0021739","xrefs":{"Monarch":{"xref_id":"0021739"}}}


id: PBO:0086782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum, while the mCherry fusion protein localizes to the vacuole","termid":"PBO:0086782"}


id: RO:0008504
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of kleptoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kleptoparasitized_by","termid":"RO:0008504"}


id: GO:0015276
data:
  {"annotated_genes":["SJAG_02322","SJAG_03895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95487,108831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ligand-gated monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-451310","Reactome:R-HSA-622326","Reactome:R-HSA-451311","Reactome:R-HSA-622325","Reactome:R-HSA-629595"],"synonyms":[{"name":"ionotropic receptor activity","type":"narrow"},{"name":"ligand-gated ion channel activity","type":"broad"}],"termid":"GO:0015276","terms_by_termid":{"GO:0005227":null}}


id: MONDO:0024293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polyposis, gastric, Dos Santos and de Magalhaes 1980 (obsolete MONDO:0024293)","secondary_identifiers":["OMIM:175020"],"termid":"MONDO:0024293","xrefs":{"Monarch":{"xref_id":"0024293"}}}


id: MONDO:0015756
data:
  {"annotated_genes":["SJAG_01548","SJAG_01008","SJAG_01349","SJAG_03905","SJAG_05979","SJAG_03453","SJAG_03081","SJAG_01013","SJAG_03424","SJAG_01748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86733,86734,86735,86736,86888,86889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[85199,85200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018881"},{"annotations":[85251,85250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01008":null,"SJAG_01013":null,"SJAG_01349":null,"SJAG_01548":null,"SJAG_01748":null,"SJAG_03081":null,"SJAG_03424":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myeloid hemopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20130","MEDGEN:1842523","UMLS:C5680514","Orphanet:171895"],"termid":"MONDO:0015756","terms_by_termid":{"MONDO:0007925":null,"MONDO:0018874":null,"MONDO:0018881":null},"xrefs":{"Monarch":{"xref_id":"0015756"}}}


id: GO:0030109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I molecule of the HLA-B subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["GOC:add","GOC:mah","PMID:9368779","PMID:11929129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"HLA-B specific inhibitory MHC class I receptor activity","termid":"GO:0030109"}


id: MONDO:1010103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eclampsia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"obstetric disorder, non-human animal","termid":"MONDO:1011339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eclampsia, non-human animal","secondary_identifiers":["OMIA:001331"],"termid":"MONDO:1010103","xrefs":{"Monarch":{"xref_id":"1010103"}}}


id: GO:0008824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanate + H2O = carbamate.","definition_xrefs":["EC:4.2.1.104","RHEA:11120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyanate hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0608","MetaCyc:R524-RXN"],"synonyms":[{"name":"carbamate hydro-lyase activity","type":"related"},{"name":"cyanase activity","type":"exact"},{"name":"cyanate C-N-lyase activity","type":"related"},{"name":"cyanate aminohydrolase activity","type":"related"},{"name":"cyanate hydrolase activity","type":"related"},{"name":"cyanate lyase activity","type":"exact"}],"termid":"GO:0008824"}


id: PBO:0030038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss","termid":"PBO:0030038"}


id: GO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Lys(or Arg)-Ile bond in complement subcomponent C1s to form the active form of C1s (EC:3.4.21.42).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C1r activity (obsolete GO:0003815)","synonyms":[{"name":"C1r esterase activity","type":"related"},{"name":"activated complement C1r","type":"related"},{"name":"complement component C1r activity","type":"exact"},{"name":"complement subcomponent C1r","type":"related"}],"termid":"GO:0003815"}


