# terms

id: MONDO:0010499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ritscher-Schinzel syndrome in which the cause of the disease is a mutation in the CCDC22 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ritscher-Schinzel syndrome","termid":"MONDO:0019078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"Ritscher-Schinzel syndrome 2","secondary_identifiers":["MEDGEN:897005","DOID:0060572","GARD:15278","OMIM:300963","UMLS:C4225419"],"synonyms":[{"name":"CCDC22 Ritscher-Schinzel syndrome","type":"exact"},{"name":"RTSC2","type":"exact"},{"name":"Ritscher-Schinzel syndrome 2","type":"exact"},{"name":"Ritscher-Schinzel syndrome 2, X-linked recessive","type":"exact"},{"name":"Ritscher-Schinzel syndrome caused by mutation in CCDC22","type":"exact"},{"name":"Ritscher-Schinzel syndrome type 2","type":"exact"}],"termid":"MONDO:0010499","xrefs":{"Monarch":{"xref_id":"0010499"}}}


id: PBO:0065262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 23 domain containing 3, pseudogene","termid":"PBO:0065262"}


id: PBO:0083964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Geranylgeranyl diphosphate synthase (GGPPS); increases the intracellular pool of geranylgeranyl diphosphate, suppressor of bet2 mutation that causes defective geranylgeranylation of small GTP-binding proteins that mediate vesicular traffic","termid":"PBO:0083964"}


id: PBO:0087861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of genes involved in glycolysis; DNA-binding protein that interacts and functions with the transcriptional activator Gcr2p; contains a long intron, which allows multiple RNA and protein isoforms with varying expression levels depending on glucose availability","termid":"PBO:0087861"}


id: GO:0014002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an astrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GOC:dgh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"astrocyte differentiation","termid":"GO:0048708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte development","synonyms":[{"name":"astrocyte cell development","type":"exact"}],"termid":"GO:0014002"}


id: PBO:0042481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 7","termid":"PBO:0042481"}


id: FYECO:0000032
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which chloride ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Cl ions","synonyms":[{"name":"chloride ions added","type":"exact"}],"termid":"FYECO:0000032"}


id: PBO:0064650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA1 pseudogene 1","termid":"PBO:0064650"}


id: PBO:0068750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 5, pseudogene","termid":"PBO:0068750"}


id: MONDO:0014733
data:
  {"annotated_genes":["SJAG_03046"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85470],"is_not":false,"summary":null,"term":"MONDO:0014733"}]},"cv_name":"mondo","definition":"SURF1-related Charcot-Marie-Tooth disease type 4 (CMT4K) is a subtype of Charcot-Marie-Tooth disease type 4 characterized by childhood onset of severe, progressive, demyelinating sensorimotor neuropathy manifesting with distal muscle weakness and atrophy of hands and feet, distal sensory impairment (vibration and pinprick) of lower limbs, lactic acidosis, areflexia and severely reduced motor nerve conduction velocities (25 m/s or less). Patients may also present kyphoscoliosis, nystagmus, hearing loss, cerebellar ataxia and/or brain MRI abnormalities (putaminal and periaqueductal lesions).","definition_xrefs":["Orphanet:391351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 4","termid":"MONDO:0018995"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4K","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110187","GARD:17616","SCTID:765047006","UMLS:C4225246","OMIM:616684","MEDGEN:895560"],"synonyms":[{"name":"CMT4K","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4 caused by mutation in SURF1","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4K","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, autosomal recessive, type 4K","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4K","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4k","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, demyelinating, autosomal recessive, type 4K","type":"related"},{"name":"SURF1 Charcot-Marie-Tooth disease type 4","type":"exact"},{"name":"SURF1-related CMT4","type":"exact"},{"name":"SURF1-related Charcot-Marie-Tooth disease type 4","type":"exact"},{"name":"SURF1-related severe demyelinating Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal recessive demyelinating Charcot-Marie-Tooth disease type 4K","type":"exact"},{"name":"autosomal recessive demyelinating Charcot-Marie-Tooth neuropathy type 4K","type":"exact"}],"termid":"MONDO:0014733","terms_by_termid":{"MONDO:0014733":null},"xrefs":{"Monarch":{"xref_id":"0014733"}}}


id: PBO:0062942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4","termid":"PBO:0062942"}


id: PBO:0051848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 3","termid":"PBO:0051848"}


id: PBO:0048190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type B receptor subunit 2","termid":"PBO:0048190"}


id: PBO:0026773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_centromere_central_core","termid":"PBO:0026773"}


id: MONDO:0009201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial abnormalities, kyphoscoliosis, and intellectual disability","secondary_identifiers":["OMIM:227250","MESH:C565580","UMLS:C1856893","MEDGEN:347325"],"synonyms":[{"name":"facial abnormalities, kyphoscoliosis, and intellectual disability","type":"exact"},{"name":"facial abnormalities, kyphoscoliosis, and mental retardation","type":"exact"}],"termid":"MONDO:0009201","xrefs":{"Monarch":{"xref_id":"0009201"}}}


id: GO:0141139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of the host mucosa by a symbiont, leading to damage or temporary subversion of that tissue. The mucosa is a membrane that lines various cavities in the body of an organism and covers the surface of internal organs.","definition_xrefs":["PMID:28598765","PMID:28764997","PMID:22520462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host tissue","termid":"GO:0141146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host mucosa","termid":"GO:0141139"}


id: PBO:0113296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteasome-binding protein; interacts physically with multiple subunits of the 20S proteasome and genetically with genes encoding 20S core particle and 19S regulatory particle subunits; specifically blocks all three proteasome active sites; exhibits boundary activity which inhibits the propagation of heterochromatic silencing; contains a PI31 proteasome regulator domain and sequence similarity with human PSMF1, a proteasome inhibitor; not an essential gene","termid":"PBO:0113296"}


id: PBO:0088378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP subunit Snu40","termid":"PBO:0088378"}


id: PBO:0078877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA phosphotransferase 1","termid":"PBO:0078877"}


id: MONDO:0010011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schizencephaly is a rare congenital cerebral malformation characterized by the presence of linear clefts in one or both hemispheres of the brain, extending from the lateral ventricles to the pial surface of the cortex, and that lead to a variety of neurological symptoms such as epilepsy, motor deficits, and psychomotor retardation.","definition_xrefs":["Orphanet:799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"encephaloclastic disorder","termid":"MONDO:0017103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"schizencephaly","secondary_identifiers":["NANDO:2200818","OMIM:269160","UMLS:C0266484","NCIT:C99056","icd11.foundation:1693546163","SCTID:253159001","GARD:166","MESH:D065707","ICD9:742.4","NANDO:1201073","MEDGEN:78606"],"synonyms":[{"name":"schizencephaly","type":"exact"}],"termid":"MONDO:0010011","xrefs":{"Monarch":{"xref_id":"0010011"}}}


id: MONDO:0003676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An electrocardiographic finding of an injury in leads corresponding to the anatomic region of the inferolateral wall of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"inferolateral myocardial infarct","secondary_identifiers":["UMLS:C3537017","DOID:5852","MEDGEN:760761"],"termid":"MONDO:0003676","xrefs":{"Monarch":{"xref_id":"0003676"}}}


id: PR:Q8WZK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC839.03c gene.","definition_xrefs":["UniProtKB:Q8WZK4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.03c","synonyms":[{"name":"Spom972h-SPBC839.03c","type":"exact"}],"termid":"PR:Q8WZK4"}


id: MONDO:0012274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acromesomelic dysplasia","termid":"MONDO:0019696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acromesomelic dysplasia 3","secondary_identifiers":["DOID:0081237","MEDGEN:904735","OMIM:609441","GARD:10077","MESH:C537913","UMLS:C4225404"],"synonyms":[{"name":"AMDD","type":"exact"},{"name":"acromesomelic dysplasia 3","type":"exact"},{"name":"acromesomelic dysplasia, Demirhan type","type":"exact"},{"name":"chondrodysplasia acromesomelic with genital anomalies","type":"related"},{"name":"chondrodysplasia, acromesomelic, with or without genital anomalies","type":"exact"}],"termid":"MONDO:0012274","xrefs":{"Monarch":{"xref_id":"0012274"}}}


id: GO:0032918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of spermidine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine acetylation","termid":"GO:0032918"}


id: GO:0015137
data:
  {"annotated_genes":["SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of citrate, 2-hydroxy-1,2,3-propanetricarboyxlate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid transmembrane transporter activity","termid":"GO:0015142"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"citrate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-433104","TC:2.A.29.7.2"],"synonyms":[{"name":"tricarboxylate transport protein","type":"related"}],"termid":"GO:0015137","terms_by_termid":{"GO:0071913":null}}


id: PR:P87293
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16A10.01 gene.","definition_xrefs":["UniProtKB:P87293","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized UPF0442 protein C16A10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.01","synonyms":[{"name":"Spom972h-SPAC16A10.01","type":"exact"}],"termid":"PR:P87293"}


id: GO:0034150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 6.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 6 signaling pathway","synonyms":[{"name":"TLR6 signaling pathway","type":"exact"},{"name":"toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034150"}


id: GO:0140341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylethanolamine from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:10029989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140303","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phosphatidylethanolamine floppase activity","synonyms":[{"name":"phosphatidylethanolamine floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"}],"termid":"GO:0140341"}


id: PBO:0084104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYF domain protein; involved in COPII vesicle formation; interacts with the Sec23p/Sec24p subcomplex; overexpression suppresses the temperature sensitivity of a myo2 mutant; similar to S. pombe Mpd2; SMY2 has a paralog, SYH1, that arose from the whole genome duplication","termid":"PBO:0084104"}


id: GO:0080151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salicylic acid mediated signal transduction.","definition_xrefs":["PMID:20181750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of salicylic acid mediated signaling pathway","termid":"GO:2000031"},{"relation_name":"positively_regulates","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of salicylic acid mediated signaling pathway","synonyms":[{"name":"positive regulation of salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0080151"}


id: MONDO:0012704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the FKTN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1X","secondary_identifiers":["UMLS:C1969024","GARD:15522","MEDGEN:370583","DOID:0110444","MESH:C566907","OMIM:611615"],"synonyms":[{"name":"CMD1X","type":"exact"},{"name":"FKTN familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1X","type":"related"},{"name":"cardiomyopathy, dilated, type 1X","type":"exact"},{"name":"cardiomyopathy, dilated, with mild or No proximal muscle weakness","type":"related"},{"name":"dilated cardiomyopathy type 1X","type":"exact"},{"name":"dilated cardiomyopathy with mild or no proximal muscle weakness","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in FKTN","type":"exact"}],"termid":"MONDO:0012704","xrefs":{"Monarch":{"xref_id":"0012704"}}}


id: MONDO:0010883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pectus excavatum-macrocephaly-dysplastic nails syndrome is a rare multiple congenital anomalies syndrome characterized by relative macrocephaly, pectus excavatum, short stature, nail dysplasia, and motor developmental delay (that resolves during childhood). There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:2835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pectus excavatum-macrocephaly-dysplastic nails syndrome","secondary_identifiers":["SCTID:763863002","GARD:374","MEDGEN:373902","UMLS:C1838160","MESH:C536728","OMIM:600399"],"synonyms":[{"name":"Zori Stalker Williams syndrome","type":"related"},{"name":"Zori-Stalker-Williams syndrome","type":"exact"},{"name":"familial short stature, developmental delay, pectus abnormalities, distinctive facies, and dysplastic nails","type":"related"},{"name":"pectus excavatum, macrocephaly and dysplastic nails","type":"related"},{"name":"pectus excavatum, macrocephaly, short stature, and dysplastic nails","type":"related"}],"termid":"MONDO:0010883","xrefs":{"Monarch":{"xref_id":"0010883"}}}


id: MONDO:0007112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Interventricular septum aneurysm is a rare, non-syndromic, congenital heart malformation characterized by the presence of a congenital aneurysm of the membranous portion of the interventricular septum. Patients may be asymptomatic or may present with ventricular or supraventricular tachycardia, fatigue, exertional dyspnea, palpitations, and cardiac murmur. Ventricular septal defects and conduction defects, such as first-degree atrio-ventricular block or incomplete right bundle branch block, may also be also associated.","definition_xrefs":["Orphanet:99092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interventricular septum aneurysm","secondary_identifiers":["GARD:16895","MEDGEN:234648","MESH:C563239","OMIM:105805","UMLS:C1387721"],"synonyms":[{"name":"aneurysm of interventricular septum","type":"related"}],"termid":"MONDO:0007112","xrefs":{"Monarch":{"xref_id":"0007112"}}}


id: MONDO:0010742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pentalogy of Cantrell (POC) is a lethal multiple congenital anomalies syndrome, characterized by the presence of 5 major malformations: midline supraumbilical abdominal wall defect, lower sternal defect, diaphragmatic pericardial defect, anterior diaphragmatic defect and various intracardiac malformations. Ectopia cordis (EC) is often found in fetuses with POC.","definition_xrefs":["Orphanet:1335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentalogy of Cantrell","secondary_identifiers":["MESH:D058502","SCTID:281587000","ICD9:759.89","NCIT:C99011","GARD:7359","MEDGEN:107540","OMIM:313850","NORD:1566","UMLS:C0559483"],"synonyms":[{"name":"Cantrell Haller Ravitsch syndrome","type":"related"},{"name":"Cantrell deformity","type":"exact"},{"name":"Cantrell pentalogy","type":"related"},{"name":"Cantrell syndrome","type":"exact"},{"name":"Midline defects, X-linked","type":"related"},{"name":"THAS","type":"related"},{"name":"Tas","type":"related"},{"name":"pentalogy of Cantrell","type":"exact"},{"name":"thoraco-abdominal syndrome","type":"exact"},{"name":"thoracoabdominal syndrome","type":"related"}],"termid":"MONDO:0010742","xrefs":{"Monarch":{"xref_id":"0010742"}}}


id: PATO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process that has a value that is increased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"},{"relation_name":"is_a","term_name":"increased quality","termid":"PATO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased process quality","termid":"PATO:0002304"}


id: PBO:0078444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining 2","termid":"PBO:0078444"}


id: PBO:0062936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 2","termid":"PBO:0062936"}


id: PBO:0063700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase","termid":"PBO:0063700"}


id: GO:0021557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the oculomotor nerve over time, from its formation to the mature structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:dph","GOC:dgh","ISBN:0838580343","GO_REF:0000021","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve development","synonyms":[{"name":"CN III development","type":"related"},{"name":"cranial nerve 3 development","type":"exact"},{"name":"cranial nerve III development","type":"exact"}],"termid":"GO:0021557"}


id: MONDO:0008454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal intradural arachnoid cysts are cerebrospinal fluid -filled sacs that are located between the spinal cord and the arachnoid membrane (one of the three membranes that cover the brain and spinal cord). The signs and symptoms of the condition vary based on the size and location of the cysts. Some affected people may have no suspicious symptoms while others experience progressive back and leg pain; tingling or numbness in the hands or feet; weakness of the legs; and involuntary muscle spasms (spasticity) that result in slow, stiff movements of the legs. When present, symptoms usually occur when the cysts compress the spinal cord or other nearby nerves. Spinal intradural arachnoid cysts are often present at birth and arecaused by developmental abnormalities in the spinal cord that occur during the pregnancy. They can also result from a previous infection or injury and develop later in life. Although there is disagreement in the medical community regarding when to treat spinal intradural arachnoid cysts, the need for treatment generally depends on the size and location of the cyst and whether or not it is causing symptoms. When indicated, the cysts are typically treated with surgery.","direct_ancestors":[{"relation_name":"is_a","term_name":"arachnoid cyst","termid":"MONDO:0008813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"spinal intradural arachnoid cysts","secondary_identifiers":["MESH:C536878","UMLS:C0344485","OMIM:182990","GARD:9701","MEDGEN:83372"],"synonyms":[{"name":"arachnoid cysts, spinal intradural","type":"related"},{"name":"spinal intradural arachnoid cysts","type":"exact"}],"termid":"MONDO:0008454","xrefs":{"Monarch":{"xref_id":"0008454"}}}


id: PBO:0088323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex WD repeat subunit Vps8","termid":"PBO:0088323"}


id: GO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage between the LSU-rRNA and the 2S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:768488","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000483"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000473"},{"relation_name":"part_of","term_name":"maturation of 2S rRNA","termid":"GO:0000475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000485"}


id: GO:0007615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The memory process that results in the formation of consolidated memory resistant to disruption of the patterned activity of the brain, without requiring protein synthesis.","definition_xrefs":["PMID:17088531","PMID:15143285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"memory","termid":"GO:0007613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anesthesia-resistant memory","termid":"GO:0007615"}


id: PBO:0114214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lactate dehydrogenase Ldh1","termid":"PBO:0114214"}


id: PBO:0056561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM8 antisense RNA 1","termid":"PBO:0056561"}


id: MONDO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive pancreatic intraductal papillary mucinous neoplasm characterized by the presence of neoplastic epithelial cells that form a single layer and are well polarized. The neoplastic cells exhibit small and uniform nuclei, mild pleomorphism, and rare mitotic figures.","definition_xrefs":["NCIT:C41249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic intraductal papillary-mucinous neoplasm","termid":"MONDO:0004286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia","secondary_identifiers":["UMLS:C1518868","DOID:7851","MEDGEN:274118","ICDO:8453/0","SCTID:473418001"],"synonyms":[{"name":"pancreatic intraductal papillary mucinous neoplasm with Low grade dysplasia","type":"exact"},{"name":"pancreatic intraductal papillary-mucinous adenoma","type":"exact"},{"name":"pancreatic intraductal papillary-mucinous neoplasm with Low grade dysplasia","type":"exact"}],"termid":"MONDO:0004381","xrefs":{"Monarch":{"xref_id":"0004381"}}}


id: PBO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric duplication","termid":"PBO:0000066"}


id: PBO:0051903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 10","termid":"PBO:0051903"}


id: GO:0034716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Gemin3 (DDX20), Gemin4, and Gemin5, and can bind to snRNAs; may be an intermediate in SMN complex assembly.","definition_xrefs":["GOC:mah","PMID:17640873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Gemin3-Gemin4-Gemin5 complex","termid":"GO:0034716"}


id: GO:0103066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol + NAD(P) = 4alpha-methyl-5alpha-cholesta-8-en-3-one + carbon dioxide + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol:NAD(P)+ 3-oxidoreductase (decarboxylating) activity (obsolete GO:0103066)","termid":"GO:0103066"}


id: GO:0006247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete TTP reduction (obsolete GO:0006247)","synonyms":[{"name":"TTP reduction","type":"exact"}],"termid":"GO:0006247"}


id: PR:O14018
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02129","PRO:DNx","PANTHER:PTHR11778:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.15","secondary_identifiers":["UniProtKB:O14018"],"synonyms":[{"name":"SerRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SARS","type":"exact"},{"name":"seryl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"seryl-tRNA(Ser/Sec) synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14018"}


id: MONDO:0958137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory disease, multisystem, with immune dysregulation, X-linked","termid":"MONDO:0957494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset autoimmune disorder due to DOCK11 partial deficiency","secondary_identifiers":["Orphanet:658946"],"termid":"MONDO:0958137","xrefs":{"Monarch":{"xref_id":"0958137"}}}


id: MONDO:0004479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that occurs during childhood.","definition_xrefs":["NCIT:C6541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood germ cell tumor","termid":"MONDO:0003751"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant childhood germ cell neoplasm","secondary_identifiers":["DOID:8149","MEDGEN:233150","UMLS:C1334574"],"synonyms":[{"name":"malignant childhood germ cell neoplasm","type":"exact"},{"name":"malignant childhood germ cell tumor","type":"related"},{"name":"malignant childhood germ cell tumour","type":"related"},{"name":"malignant paediatric germ cell neoplasm","type":"related"},{"name":"malignant paediatric germ cell tumour","type":"exact"},{"name":"malignant pediatric germ cell neoplasm","type":"related"},{"name":"malignant pediatric germ cell tumor","type":"exact"}],"termid":"MONDO:0004479","xrefs":{"Monarch":{"xref_id":"0004479"}}}


id: PBO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 2","termid":"PBO:0046139"}


id: MONDO:0013932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX2 defect","termid":"MONDO:0100260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0006025","MONDO:0005066","MONDO:0005559","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 5A (Zellweger)","secondary_identifiers":["NCIT:C155756","GARD:15861","OMIM:614866","UMLS:C3553940","DOID:0080480","MEDGEN:766854"],"synonyms":[{"name":"PBD5A","type":"related"},{"name":"peroxisome biogenesis disorder 5A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 10","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group 5","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group F","type":"related"}],"termid":"MONDO:0013932","xrefs":{"Monarch":{"xref_id":"0013932"}}}


id: PR:Q9USI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.15 gene.","definition_xrefs":["UniProtKB:Q9USI0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C794.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.15","synonyms":[{"name":"Spom972h-SPCC794.15","type":"exact"}],"termid":"PR:Q9USI0"}


id: GO:0010946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic joint molecule formation. Meiotic joint molecule formation is the conversion of the paired broken DNA and homologous duplex DNA into a four-stranded branched intermediate, known as a joint molecule, formed during meiotic recombination.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic joint molecule formation","termid":"GO:0000709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of meiotic joint molecule formation","termid":"GO:0010946"}


id: GO:1900344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from dimethyl sulfide","termid":"GO:1900342"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0006790"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from dimethyl sulfide","synonyms":[{"name":"activation of methane biosynthetic process from dimethyl sulfide","type":"narrow"},{"name":"up regulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"up-regulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"upregulation of methane biosynthetic process from dimethyl sulfide","type":"exact"}],"termid":"GO:1900344"}


id: PBO:0030335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phosphatidylserine_absent_from_cell","termid":"PBO:0030335"}


id: MONDO:1011674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperosmolar nonketotic diabetes mellitus, non-human animal","secondary_identifiers":["OMIA:000280"],"termid":"MONDO:1011674","xrefs":{"Monarch":{"xref_id":"1011674"}}}


id: PR:P78875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tpp1 gene.","definition_xrefs":["UniProtKB:P78875","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-phosphatase tpp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.15c","synonyms":[{"name":"SPAC19G12.15c","type":"related"},{"name":"Spom972h-tpp1","type":"exact"},{"name":"TPP tpp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate phosphatase tpp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78875"}


id: PBO:0045210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C5","termid":"PBO:0045210"}


id: MONDO:0003888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant testicular mixed germ cell neoplasm that occurs during childhood. It is characterized by the presence of embryonal carcinoma and teratoma components.","definition_xrefs":["NCIT:C6539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood testicular mixed germ cell cancer","termid":"MONDO:0003787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood testicular mixed embryonal carcinoma and teratoma","secondary_identifiers":["DOID:6474","UMLS:C1333008","MEDGEN:234137"],"synonyms":[{"name":"childhood teratocarcinoma of testis","type":"related"},{"name":"childhood teratocarcinoma of the testis","type":"related"},{"name":"childhood testicular mixed embryonal carcinoma and teratoma","type":"exact"},{"name":"childhood testicular teratocarcinoma","type":"related"},{"name":"paediatric testicular teratocarcinoma","type":"exact"},{"name":"pediatric testicular teratocarcinoma","type":"exact"}],"termid":"MONDO:0003888","xrefs":{"Monarch":{"xref_id":"0003888"}}}


id: GO:0030409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-formimidoyltetrahydrofolate + L-glutamate = tetrahydrofolate + N-formimidoyl-L-glutamate.","definition_xrefs":["RHEA:15097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"glutamate formimidoyltransferase activity","secondary_identifiers":["EC:2.1.2.5","MetaCyc:GLUTAMATE-FORMIMINOTRANSFERASE-RXN","GO:0030407"],"synonyms":[{"name":"5-formimidoyltetrahydrofolate:L-glutamate N-formimidoyltransferase activity","type":"related"},{"name":"formimidoyltransferase activity","type":"broad"},{"name":"formiminoglutamic acid transferase activity","type":"related"},{"name":"formiminoglutamic formiminotransferase activity","type":"related"},{"name":"formiminotransferase activity","type":"broad"},{"name":"glutamate formiminotransferase activity","type":"exact"},{"name":"glutamate formyltransferase activity","type":"related"}],"termid":"GO:0030409"}


id: PBO:0055829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 4","termid":"PBO:0055829"}


id: PBO:0079429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin delta 1","termid":"PBO:0079429"}


id: GO:0051864
data:
  {"annotated_genes":["SJAG_03041","SJAG_03286","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86911,111678],"is_not":false,"summary":null,"term":"GO:0051864"},{"annotations":[117197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 36 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:16362057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03041":null,"SJAG_03286":null,"SJAG_03664":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0140096","GO:0003824","GO:0032452"],"is_obsolete":false,"name":"histone H3K36 demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"[histone-H3]-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3-K36 demethylase activity","type":"exact"},{"name":"histone H3-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-36 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K36 specific)","type":"exact"},{"name":"histone-lysine (H3-K36) demethylase activity","type":"exact"},{"name":"histone-lysine demethylase activity (H3-K36 specific)","type":"exact"},{"name":"histone-lysine(H3-K36) demethylase activity","type":"exact"}],"termid":"GO:0051864","terms_by_termid":{"GO:0051864":null,"GO:0140680":null}}


id: PBO:0065524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched 1","termid":"PBO:0065524"}


id: MONDO:0019405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Facial onset sensory and motor neuronopathy is characterized initially by paraesthesia and numbness in the region of the trigeminal nerve distribution, which later progresses to involve the scalp, neck, upper trunk and upper limbs. Onset of motor manifestations occurs later with cramps, fasciculations, dysphagia, dysarthria, muscle weakness and atrophy. This syndrome has been described in four males and appears to be a slowly progressive neurodegenerative disease.","definition_xrefs":["Orphanet:85162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"facial onset sensory and motor neuronopathy","secondary_identifiers":["MEDGEN:1374397","SCTID:723306004","UMLS:C4509818","GARD:12036"],"synonyms":[{"name":"FOSMN syndrome","type":"exact"},{"name":"facial onset sensorimotor neuronopathy syndrome","type":"related"},{"name":"facial onset sensory and motor neuronopathy syndrome","type":"related"}],"termid":"MONDO:0019405","xrefs":{"Monarch":{"xref_id":"0019405"}}}


id: PBO:0078739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRMT1 pseudogene 1","termid":"PBO:0078739"}


id: PBO:0111771
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box","termid":"PBO:0111771"}


id: MONDO:0014740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the HOMER2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 68","secondary_identifiers":["UMLS:C4225240","GARD:18144","DOID:0110589","OMIM:616707","MEDGEN:898808"],"synonyms":[{"name":"DFNA68","type":"narrow"},{"name":"HOMER2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 68","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 68","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in HOMER2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 68","type":"narrow"},{"name":"deafness, autosomal dominant 68","type":"narrow"},{"name":"deafness, autosomal dominant type 68","type":"narrow"}],"termid":"MONDO:0014740","xrefs":{"Monarch":{"xref_id":"0014740"}}}


id: PBO:0059178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose receptor C-type 1","termid":"PBO:0059178"}


id: MONDO:0007736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete HPA 1 Recognition polymorphism, beta-globin-related (obsolete MONDO:0007736)","termid":"MONDO:0007736","xrefs":{"Monarch":{"xref_id":"0007736"}}}


id: GO:1904718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of AMPA glutamate receptor clustering.","definition_xrefs":["GOC:hjd","GO_REF:0000058","GOC:TermGenie","PMID:21558424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of postsynaptic membrane organization","termid":"GO:1901627"},{"relation_name":"is_a","term_name":"negative regulation of receptor clustering","termid":"GO:1903910"},{"relation_name":"is_a","term_name":"regulation of AMPA glutamate receptor clustering","termid":"GO:1904717"},{"relation_name":"negatively_regulates","term_name":"AMPA glutamate receptor clustering","termid":"GO:0097113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of AMPA glutamate receptor clustering","synonyms":[{"name":"down regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"down regulation of AMPA receptor clustering","type":"exact"},{"name":"down regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"down-regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"down-regulation of AMPA receptor clustering","type":"exact"},{"name":"down-regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"downregulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"downregulation of AMPA receptor clustering","type":"exact"},{"name":"downregulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"inhibition of AMPA glutamate receptor clustering","type":"narrow"},{"name":"inhibition of AMPA receptor clustering","type":"narrow"},{"name":"inhibition of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"narrow"},{"name":"negative regulation of AMPA receptor clustering","type":"exact"},{"name":"negative regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"}],"termid":"GO:1904718"}


id: MONDO:0019461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of prolymphocytes affecting the blood, bone marrow, and spleen. It is characterized by prolymphocytes exceeding 55% of the lymphoid cells in the blood and profound splenomegaly.","definition_xrefs":["MESH:D054403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolymphocytic leukemia","termid":"MONDO:0001023"},{"relation_name":"is_a","term_name":"neoplasm of mature B-cells","termid":"MONDO:0004949"},{"relation_name":"is_a","term_name":"aggressive B-cell non-Hodgkin lymphoma","termid":"MONDO:0017595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"B-cell prolymphocytic leukemia","secondary_identifiers":["UMLS:C0475801","GARD:8223","SCTID:277619001","EFO:1000102","NCIT:C4753","icd11.foundation:1997215876","DOID:0081041","ICDO:9833/3","Orphanet:86852","MEDGEN:105396","ONCOTREE:BPLL"],"synonyms":[{"name":"B prolymphocytic leukaemia","type":"exact"},{"name":"B prolymphocytic leukemia","type":"exact"},{"name":"B-PLL","type":"exact"},{"name":"B-cell prolymphocytic leukemia","type":"exact"},{"name":"BPLL","type":"related"}],"termid":"MONDO:0019461","xrefs":{"Monarch":{"xref_id":"0019461"}}}


id: PBO:0049378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 2","termid":"PBO:0049378"}


id: GO:0016590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals, Isw2 in S. cerevisiae), an ACF1 homolog, and generally no other subunits, though Xenopus is an exception with a third non-conserved subunit. ACF plays roles in regulation of RNA polymerase II transcription and in DNA replication and repair.","definition_xrefs":["GOC:bf","PMID:12192034","PMID:15284901","PMID:16568949","PMID:21810179","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"ACF complex","synonyms":[{"name":"ATP-utilizing chromatin assembly and remodeling factor complex","type":"exact"}],"termid":"GO:0016590"}


id: MONDO:0012724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoinflammatory disease caused by mutations in the NLRP12 gene. It is characterized by periodic fevers beginning in the first year of life that are triggered by cold exposure. Episodes occur more than once per month.","definition_xrefs":["NCIT:C119043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cold autoinflammatory syndrome","termid":"MONDO:0018768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial cold autoinflammatory syndrome 2","secondary_identifiers":["UMLS:C2673198","NANDO:2200454","GARD:17201","MEDGEN:435869","NANDO:2200449","Orphanet:247868","MESH:C567090","OMIM:611762","DOID:0090063"],"synonyms":[{"name":"FCAS2","type":"exact"},{"name":"NALP12-associated hereditary periodic fever syndrome","type":"exact"},{"name":"NAPS12","type":"exact"},{"name":"NLRP12 familial cold autoinflammatory syndrome","type":"exact"},{"name":"NLRP12-associated hereditary periodic fever syndrome","type":"exact"},{"name":"familial cold autoinflammatory syndrome 2","type":"exact"},{"name":"familial cold autoinflammatory syndrome caused by mutation in NLRP12","type":"exact"},{"name":"familial cold autoinflammatory syndrome type 2","type":"exact"}],"termid":"MONDO:0012724","xrefs":{"Monarch":{"xref_id":"0012724"}}}


id: GO:0046829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of RNA from the cytoplasm into the nucleus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"negative regulation of nucleocytoplasmic transport","termid":"GO:0046823"},{"relation_name":"is_a","term_name":"regulation of RNA import into nucleus","termid":"GO:0046828"},{"relation_name":"negatively_regulates","term_name":"RNA import into nucleus","termid":"GO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"negative regulation of RNA import into nucleus","synonyms":[{"name":"down regulation of RNA import into nucleus","type":"exact"},{"name":"down-regulation of RNA import into nucleus","type":"exact"},{"name":"downregulation of RNA import into nucleus","type":"exact"},{"name":"inhibition of RNA import into nucleus","type":"narrow"},{"name":"negative regulation of RNA import into cell nucleus","type":"exact"},{"name":"negative regulation of RNA transport from cytoplasm to nucleus","type":"exact"},{"name":"negative regulation of RNA-nucleus import","type":"exact"}],"termid":"GO:0046829"}


id: MONDO:0004204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous papilloma that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous papilloma","termid":"MONDO:0001825"},{"relation_name":"is_a","term_name":"skin papilloma","termid":"MONDO:0002536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"squamous cell skin papilloma","secondary_identifiers":["NCIT:C4462","SCTID:254661000","UMLS:C0345983","DOID:7380","MEDGEN:83397"],"synonyms":[{"name":"Dyskeratotic papilloma of skin","type":"exact"},{"name":"Dyskeratotic papilloma of the skin","type":"exact"},{"name":"Dyskeratotic skin papilloma","type":"exact"},{"name":"hyperkeratotic papilloma of skin","type":"exact"},{"name":"hyperkeratotic papilloma of the skin","type":"exact"},{"name":"hyperkeratotic skin papilloma","type":"exact"},{"name":"parakeratotic papilloma of skin","type":"exact"},{"name":"parakeratotic papilloma of the skin","type":"exact"},{"name":"parakeratotic skin papilloma","type":"exact"},{"name":"squamous cell papilloma of skin","type":"exact"},{"name":"squamous cell papilloma of the skin","type":"exact"},{"name":"squamous cell skin papilloma","type":"exact"},{"name":"zone of skin squamous papilloma","type":"exact"}],"termid":"MONDO:0004204","xrefs":{"Monarch":{"xref_id":"0004204"}}}


id: GO:0007613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task).","definition_xrefs":["ISBN:0582227089","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning or memory","termid":"GO:0007611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory","secondary_identifiers":["Wikipedia:Memory"],"termid":"GO:0007613"}


id: PR:Q9P7V8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphate carrier protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24089:SF22","OMA:SCHPO03484","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphate carrier protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.13c","secondary_identifiers":["UniProtKB:Q9P7V8"],"synonyms":[{"name":"Spom972h-SLC25A3","type":"exact"}],"termid":"PR:Q9P7V8"}


id: GO:0005597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen trimer containing alpha(XVI) chains; type XVI trimers can associate with microfibrils.","definition_xrefs":["GOC:mah","PMID:12782140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XVI trimer","termid":"GO:0005597"}


id: PBO:0087660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of SEAC, a coatomer-related complex that associates dynamically with the vacuole; Npr3p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and leading to inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; null mutant has meiotic defects; human NPRL3 homolog","termid":"PBO:0087660"}


id: PBO:0042097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 169","termid":"PBO:0042097"}


id: GO:0099007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the presynaptic endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of endosome membrane","termid":"GO:0031313"},{"relation_name":"part_of","term_name":"presynaptic endosome membrane","termid":"GO:0098954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of presynaptic endosome membrane","termid":"GO:0099007"}


id: MONDO:0013150
data:
  {"annotated_genes":["SJAG_04840"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030676"}]},"cv_name":"mondo","definition":"Infantile dystonia-parkinsonism (IPD) is an extremely rare inherited neurological syndrome that presents in early infancy with hypokinetic parkinsonism and dystonia and that can be fatal.","definition_xrefs":["Orphanet:238455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"parkinsonism-dystonia, infantile","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:613135","UMLS:C2751067","NCIT:C129866","SCTID:722763000","GARD:10484","MEDGEN:413468","MESH:C567730"],"synonyms":[{"name":"IPD","type":"exact"},{"name":"PARKINSONISM-dystonia, infantile","type":"exact"},{"name":"PKDYS","type":"exact"},{"name":"Parkinsonism-dystonia infantile","type":"exact"},{"name":"dopamine transporter deficiency syndrome","type":"exact"},{"name":"infantile Parkinsonism-dystonia","type":"exact"},{"name":"parkinsonism-dystonia, infantile","type":"exact"}],"termid":"MONDO:0013150","terms_by_termid":{"MONDO:0030676":null},"xrefs":{"Monarch":{"xref_id":"0013150"}}}


id: PBO:0086771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; sporulation is abnormal in homozygous diploid; SWAT-GFP fusion protein localizes to the nucleus; YOR268C is not an essential gene","termid":"PBO:0086771"}


id: MONDO:1011747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recessive hypotrichosis, non-human animal","secondary_identifiers":["OMIA:001279"],"termid":"MONDO:1011747","xrefs":{"Monarch":{"xref_id":"1011747"}}}


id: FYPO:0002913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which antisense RNA transcription occurs to a greater extent than normal. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased antisense RNA level","termid":"FYPO:0003557"},{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased antisense RNA transcription","synonyms":[{"name":"increased antisense RNA transcription during mitotic cell cycle","type":"related"},{"name":"increased antisense RNA transcription during vegetative growth","type":"exact"},{"name":"increased antisense transcription","type":"exact"},{"name":"increased antisense transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0002913"}


id: PBO:0079267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39A","termid":"PBO:0079267"}


id: PBO:0087409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-specific adaptor protein involved in apo-Rli1p maturation; subunit of the Yae1-Lto1 complex, recruiting apo-Rli1p to the CIA targeting complex, facilitating the insertion of an Fe/S cluster by the Fe-S biosynthetic machinery; deca-GX3 motif crucial for complex formation; essential for aerobic but not anaerobic growth; homolog of human YAE1D1, which is overexpressed in oral cancers; co-expression of YAE1D1 and LTO1 homolog ORAOV1 restores growth and Rli1p maturation after YAE1 depletion","termid":"PBO:0087409"}


id: FYPO:0003132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a gene product is normally localized to discrete regions in the nucleus (i.e. its localization is indistinguishable from wild type), visible as foci or dots by microscopy, during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal punctate nuclear localization during cellular response to ionizing radiation","synonyms":[{"name":"normal punctate nuclear localisation during cellular response to ionising radiation","type":"related"},{"name":"normal punctate nuclear localization during cellular response to IR","type":"exact"},{"name":"normal punctate nuclear localization during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"normal punctate nuclear localization during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0003132"}


id: PBO:0034774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex ATPase subunit Psm1/Smc1","termid":"PBO:0034774"}


id: PBO:0076583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 8","termid":"PBO:0076583"}


id: GO:0033419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"CUA codon-amino acid adaptor activity","synonyms":[{"name":"CTA codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033419"}


id: PBO:0053990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1309","termid":"PBO:0053990"}


id: MONDO:0042972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease with sepsis","termid":"MONDO:0005229"},{"relation_name":"is_a","term_name":"meningococcal infection","termid":"MONDO:0005373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningococcemia","secondary_identifiers":["SCTID:4089001","MEDGEN:6300","UMLS:C0025306","ICD9:036.2"],"synonyms":[{"name":"meningococcal septicemia","type":"related"},{"name":"meningococcemia","type":"exact"}],"termid":"MONDO:0042972","xrefs":{"Monarch":{"xref_id":"0042972"}}}


id: GO:0034558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pertechnetate ion + 3/2 H2 = technetium (IV) oxide + H2O + OH-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete technetium (VII) reductase activity (obsolete GO:0034558)","termid":"GO:0034558"}


id: PBO:0083918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forms dehydrodolichyl diphosphate synthase complex with RER2 or SRT1; tet-repressible mutant shows accumulation of hypoglycosylated forms of CPY, suggesting that Nus1p may be involved in protein trafficking; mutations in human homolog NUS1 have been implicated in congenital scoliosis, neurological impairment, refractory epilepsy, hearing deficit, and visual impairment; human cis-prenyltransferase complex complements yeast null mutant","termid":"PBO:0083918"}


id: PBO:0047226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 228 member B","termid":"PBO:0047226"}


id: PBO:0040508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin","termid":"PBO:0040508"}


id: GO:1901465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole metabolic process","termid":"GO:1901403"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"activation of tetrapyrrole anabolism","type":"exact"},{"name":"activation of tetrapyrrole biosynthesis","type":"exact"},{"name":"activation of tetrapyrrole biosynthetic process","type":"narrow"},{"name":"activation of tetrapyrrole formation","type":"exact"},{"name":"activation of tetrapyrrole synthesis","type":"exact"},{"name":"positive regulation of tetrapyrrole anabolism","type":"exact"},{"name":"positive regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"positive regulation of tetrapyrrole formation","type":"exact"},{"name":"positive regulation of tetrapyrrole synthesis","type":"exact"},{"name":"up regulation of tetrapyrrole anabolism","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"up regulation of tetrapyrrole formation","type":"exact"},{"name":"up regulation of tetrapyrrole synthesis","type":"exact"},{"name":"up-regulation of tetrapyrrole anabolism","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"up-regulation of tetrapyrrole formation","type":"exact"},{"name":"up-regulation of tetrapyrrole synthesis","type":"exact"},{"name":"upregulation of tetrapyrrole anabolism","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"upregulation of tetrapyrrole formation","type":"exact"},{"name":"upregulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901465"}


id: PBO:0041180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 3 member A2","termid":"PBO:0041180"}


id: PBO:0060332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IIIB","termid":"PBO:0060332"}


id: PBO:0081307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 90 pseudogene 2","termid":"PBO:0081307"}


id: GO:0140892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction chloride(in) + 2 hydrogencarbonate(out) + Na+(out) = chloride(out) + 2 hydrogencarbonate(in) + Na+(in).","definition_xrefs":["PMID:8189393","PMID:20389022","PMID:18577713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"},{"relation_name":"is_a","term_name":"chloride:bicarbonate antiporter activity","termid":"GO:0140900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium,bicarbonate:chloride antiporter activity","secondary_identifiers":["TC:2.A.31.2.4"],"synonyms":[{"name":"sodium,hydrogencarbonate:chloride antiporter activity","type":"exact"},{"name":"sodium-dependent chloride/bicarbonate exchanger activity","type":"exact"}],"termid":"GO:0140892"}


id: MONDO:0005692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cat scratch disease is an infectious illness caused by the bacteria bartonella (Bartonella henselae). It is believed to be transmitted by cat scratches, bites, or exposure to cat saliva. This self-limiting infectious diseaseis characterized by a bump or blister at the site of the bite or scratch and swelling and pain in the lymph nodes. Other features may include fatigue, headache, achiness, and fever. Although cat-scratch disease usually subsides without treatment, antibiotic and/or antimicrobial therapy may help speed recovery.","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"},{"relation_name":"is_a","term_name":"bartonellosis","termid":"MONDO:0005664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cat-scratch disease","secondary_identifiers":["NCIT:C84620","MEDGEN:2861","MESH:D002372","Orphanet:50839","EFO:0007195","MedDRA:10007729","DOID:11258","ICD10CM:A28.1","icd11.foundation:2003001085","SCTID:79974007","UMLS:C0007361","GARD:27","ICD9:078.3"],"synonyms":[{"name":"Cat scratch disease","type":"related"},{"name":"Cat-scratch fever","type":"exact"},{"name":"Foshay-Mollaret Cat scratch fever","type":"exact"},{"name":"bartonellosis due to Bartonella henselae infection","type":"exact"},{"name":"benign lymphoreticulosis","type":"exact"},{"name":"cat scratch fever","type":"exact"},{"name":"debre's syndrome","type":"exact"},{"name":"debre-Mollaret syndrome","type":"exact"}],"termid":"MONDO:0005692","xrefs":{"Monarch":{"xref_id":"0005692"}}}


id: PBO:0059661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 27","termid":"PBO:0059661"}


id: PBO:0004952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper amine oxidase-like protein Cao2","termid":"PBO:0004952"}


id: PBO:0068867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 107, pseudogene","termid":"PBO:0068867"}


id: PBO:0059700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 8","termid":"PBO:0059700"}


id: GO:0072748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tacrolimus (FK506) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to tacrolimus","termid":"GO:1901327"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tacrolimus","synonyms":[{"name":"cellular response to FK506","type":"exact"},{"name":"cellular response to tacrolimus hydrate","type":"exact"}],"termid":"GO:0072748"}


id: GO:2000307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor (ligand) superfamily member 11 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:0072535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of tumor necrosis factor (ligand) superfamily member 11 production","synonyms":[{"name":"regulation of RANKL production","type":"exact"},{"name":"regulation of TNFSF11 production","type":"exact"}],"termid":"GO:2000307"}


id: GO:2001030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellular glucuronidation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular glucuronidation (obsolete GO:2001030)","synonyms":[{"name":"negative regulation of cellular glucuronide biosynthesis","type":"exact"},{"name":"negative regulation of cellular glucuronide biosynthetic process","type":"exact"},{"name":"negative regulation of cellular glucuronoside biosynthesis","type":"exact"},{"name":"negative regulation of cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:2001030"}


id: MONDO:0020182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete palpebral tumor with a vascular malformation (obsolete MONDO:0020182)","secondary_identifiers":["Orphanet:98592"],"termid":"MONDO:0020182","xrefs":{"Monarch":{"xref_id":"0020182"}}}


id: GO:0010039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iron ion","synonyms":[{"name":"response to iron","type":"exact"}],"termid":"GO:0010039"}


id: PR:Q9Y7J4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2/3 complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12391:SF0","PRO:DNx","OMA:SCHPO03569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2/3 complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.08c","secondary_identifiers":["UniProtKB:Q9Y7J4"],"synonyms":[{"name":"Spom972h-ARPC3","type":"exact"},{"name":"arp2/3 complex 21 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p21-ARC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7J4"}


id: GO:0015968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A specific global change in the metabolism of a bacterial cell (the downregulation of nucleic acid and protein synthesis, and the simultaneous upregulation of protein degradation and amino acid synthesis) as a result of starvation.","definition_xrefs":["PMID:11282471","ISBN:0124325653","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stringent response","secondary_identifiers":["Wikipedia:Stringent_response"],"termid":"GO:0015968"}


id: PBO:0114107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane DUF2015 family conserved fungal protein","termid":"PBO:0114107"}


id: GO:1990701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the ERGIC membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane (obsolete GO:1990701)","synonyms":[{"name":"integral component of ER-Golgi intermediate compartment membrane","type":"exact"},{"name":"integral component of ERGIC membrane","type":"exact"},{"name":"integral component of endoplasmic reticulum-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:1990701"}


id: PBO:0003725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp38 (predicted)","termid":"PBO:0003725"}


id: PBO:0060021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 9","termid":"PBO:0060021"}


id: PBO:0067584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 743, pseudogene","termid":"PBO:0067584"}


id: PBO:0054612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2017","termid":"PBO:0054612"}


id: GO:0072758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a topoisomerase inhibitor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to topoisomerase inhibitor","termid":"GO:0072758"}


id: GO:0098932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell wall peptidoglycans to allow entry into the host cell.","definition_xrefs":["GOC:dos","VZ:3940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell wall","termid":"GO:0052009"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell wall peptidoglycan","synonyms":[{"name":"catabolism of host cell wall peptidoglycan by virus","type":"exact"},{"name":"degradation of host cell wall peptidoglycan by virus","type":"exact"},{"name":"degradation of host peptidoglycans during virus entry","type":"exact"},{"name":"disassembly by virus of host cell wall peptidoglycan","type":"exact"},{"name":"disruption by virus of host cell wall peptidoglycan during virus entry","type":"exact"}],"termid":"GO:0098932"}


id: MONDO:0010522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An amelogenesis imperfecta associated with mutation in a gene in the Xq22-q28 region.","definition_xrefs":["PMID:1358807","DOID:0110059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta","termid":"MONDO:0019507"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked amelogenesis imperfecta hypoplastic/hypomaturation 2","secondary_identifiers":["OMIM:301201","UMLS:C1845051","GARD:9944","MEDGEN:336845"],"synonyms":[{"name":"AIH3","type":"exact"},{"name":"AIH3 (formerly)","type":"related"},{"name":"X-linked amelogenesis imperfecta hypoplastic/hypomaturation type 2","type":"exact"},{"name":"X-linked enamel hypoplasia","type":"related"},{"name":"amelogenesis imperfecta 3 hypoplastic type","type":"exact"},{"name":"amelogenesis imperfecta 3, hypoplastic type","type":"related"},{"name":"amelogenesis imperfecta 3, hypoplastic type (formerly)","type":"related"},{"name":"amelogenesis imperfecta 3, hypoplastic type, formerly","type":"related"},{"name":"amelogenesis imperfecta type IE X-linked 2","type":"exact"},{"name":"amelogenesis imperfecta, hypoplastic/hypomaturation, X-linked 2","type":"related"},{"name":"amelogenesis imperfecta, hypoplastic/hypomaturation, X-linked type 2","type":"exact"},{"name":"amelogenesis imperfecta, type IE, X-linked 2","type":"exact"},{"name":"enamel hypoplasia, X-linked","type":"related"}],"termid":"MONDO:0010522","xrefs":{"Monarch":{"xref_id":"0010522"}}}


id: PBO:0063275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 1","termid":"PBO:0063275"}


id: MONDO:0004034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that involves the eye.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005328"],"is_obsolete":false,"name":"eye lymphoma","secondary_identifiers":["UMLS:C0730306","NCIT:C35690","DOID:6903","MEDGEN:1788822"],"synonyms":[{"name":"eye lymphoma","type":"exact"},{"name":"eyeball of camera-type eye lymphoma","type":"exact"},{"name":"lymphoma of eyeball of camera-type eye","type":"exact"},{"name":"primary eye lymphoma","type":"exact"}],"termid":"MONDO:0004034","xrefs":{"Monarch":{"xref_id":"0004034"}}}


id: GO:1901914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"negatively_regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of capsule organization","synonyms":[{"name":"down regulation of capsule organisation","type":"exact"},{"name":"down regulation of capsule organization","type":"exact"},{"name":"down regulation of capsule organization and biogenesis","type":"related"},{"name":"down-regulation of capsule organisation","type":"exact"},{"name":"down-regulation of capsule organization","type":"exact"},{"name":"down-regulation of capsule organization and biogenesis","type":"related"},{"name":"downregulation of capsule organisation","type":"exact"},{"name":"downregulation of capsule organization","type":"exact"},{"name":"downregulation of capsule organization and biogenesis","type":"related"},{"name":"inhibition of capsule organisation","type":"narrow"},{"name":"inhibition of capsule organization","type":"narrow"},{"name":"inhibition of capsule organization and biogenesis","type":"related"},{"name":"negative regulation of capsule organisation","type":"exact"},{"name":"negative regulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901914"}


id: PBO:0090324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga8","termid":"PBO:0090324"}


id: PR:O59771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UMP-CMP kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04532","PRO:DNx","PANTHER:PTHR23359:SF23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.05c","secondary_identifiers":["UniProtKB:O59771"],"synonyms":[{"name":"ATP:UMP phosphotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CMPK1","type":"exact"},{"name":"UK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMPK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dCMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"deoxycytidylate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uridine monophosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59771"}


id: PBO:0051855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 1","termid":"PBO:0051855"}


id: GO:0019294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of keto-3-deoxy-D-manno-octulosonic acid, an acidic sugar present in lipopolysaccharides of the outer membranes of some Gram-negative bacteria.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"keto-3-deoxy-D-manno-octulosonic acid metabolic process","termid":"GO:0046400"},{"relation_name":"part_of","term_name":"lipopolysaccharide biosynthetic process","termid":"GO:0009103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006629","GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"keto-3-deoxy-D-manno-octulosonic acid biosynthetic process","secondary_identifiers":["MetaCyc:KDOSYN-PWY"],"synonyms":[{"name":"KDO biosynthesis","type":"exact"},{"name":"KDO biosynthetic process","type":"exact"},{"name":"keto-3-deoxy-D-manno-octulosonic acid anabolism","type":"exact"},{"name":"keto-3-deoxy-D-manno-octulosonic acid biosynthesis","type":"exact"},{"name":"keto-3-deoxy-D-manno-octulosonic acid formation","type":"exact"},{"name":"keto-3-deoxy-D-manno-octulosonic acid synthesis","type":"exact"},{"name":"ketodeoxyoctanoate biosynthetic process","type":"related"}],"termid":"GO:0019294"}


id: GO:0019867
data:
  {"annotated_genes":["SJAG_02641","SJAG_03515","SJAG_04996","SJAG_01357","SJAG_02355","SJAG_00699","SJAG_04270","SJAG_01929","SJAG_01780","SJAG_02084","SJAG_03502","SJAG_01951","SJAG_00812","SJAG_02543","SJAG_04759","SJAG_03464","SJAG_04732","SJAG_01312","SJAG_05268","SJAG_03416","SJAG_00265","SJAG_03358","SJAG_03175","SJAG_00368","SJAG_01900","SJAG_01212","SJAG_00569","SJAG_00428","SJAG_02361","SJAG_00235","SJAG_01134","SJAG_05259","SJAG_00810","SJAG_00048","SJAG_01305","SJAG_00880","SJAG_03415","SJAG_00031","SJAG_04072","SJAG_04203","SJAG_00948","SJAG_04370","SJAG_01880","SJAG_00655","SJAG_03435","SJAG_02848","SJAG_03345","SJAG_00999","SJAG_00605","SJAG_03710","SJAG_02265"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88762,104288,115211],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036266"},{"annotations":[104289,98756,100014,105269,88765,101994,106051,115212,103947],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032473"},{"annotations":[107111,116056,105314,106984,90410],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032865"},{"annotations":[106680],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031315"},{"annotations":[109859,111241],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140595"},{"annotations":[94942,104131,88559,108336,91656,100953,100015,102248,103840,117023,118209,111323,101947,89007,87741,96389,115747,91443,110057,108742,95597,91414,107172,105454,104087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005741"},{"annotations":[107031,99037,107052,90405,105643,98924],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005742"},{"annotations":[88040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005640"},{"annotations":[90412,109851,89882,98087],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001401"}]},"cv_name":"cellular_component","definition":"The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00048":null,"SJAG_00235":null,"SJAG_00265":null,"SJAG_00368":null,"SJAG_00428":null,"SJAG_00569":null,"SJAG_00605":null,"SJAG_00655":null,"SJAG_00699":null,"SJAG_00810":null,"SJAG_00812":null,"SJAG_00880":null,"SJAG_00948":null,"SJAG_00999":null,"SJAG_01134":null,"SJAG_01212":null,"SJAG_01305":null,"SJAG_01312":null,"SJAG_01357":null,"SJAG_01780":null,"SJAG_01880":null,"SJAG_01900":null,"SJAG_01929":null,"SJAG_01951":null,"SJAG_02084":null,"SJAG_02265":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02543":null,"SJAG_02641":null,"SJAG_02848":null,"SJAG_03175":null,"SJAG_03345":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03435":null,"SJAG_03464":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03710":null,"SJAG_04072":null,"SJAG_04203":null,"SJAG_04270":null,"SJAG_04370":null,"SJAG_04732":null,"SJAG_04759":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019867","terms_by_termid":{"GO:0001401":null,"GO:0005640":null,"GO:0005741":null,"GO:0005742":null,"GO:0031315":null,"GO:0032473":null,"GO:0032865":null,"GO:0036266":null,"GO:0140595":null}}


id: MONDO:0016874
data:
  {"annotated_genes":["SJAG_00112"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 9 disorder","termid":"MONDO:0700016"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00112":null},"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1825996","GARD:20797","Orphanet:261806","UMLS:C5679653"],"synonyms":[{"name":"partial deletion of chromosome type 9","type":"exact"},{"name":"partial monosomy of chromosome 9","type":"exact"}],"termid":"MONDO:0016874","terms_by_termid":{"MONDO:0014848":null},"xrefs":{"Monarch":{"xref_id":"0016874"}}}


id: GO:0002588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002582"},{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002585"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002586"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of peptide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"}],"termid":"GO:0002588"}


id: FYPO:0006689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which insertion or deletion mutations occur at a higher frequency than normal.","definition_xrefs":["PomBase:mah","PMID:14599746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mutator","termid":"FYPO:0000256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased insertion/deletion frequency","synonyms":[{"name":"increased indel frequency","type":"related"},{"name":"increased insertion or deletion frequency","type":"exact"}],"termid":"FYPO:0006689"}


id: PBO:0085728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the processing of pre-rRNA to mature rRNA; contains a C2/C2 zinc finger motif; srd1 mutation suppresses defects caused by the rrp1-1 mutation","termid":"PBO:0085728"}


id: GO:0045856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pole plasm oskar mRNA localization","termid":"GO:0007317"},{"relation_name":"is_a","term_name":"positive regulation of intracellular mRNA localization","termid":"GO:1904582"},{"relation_name":"positively_regulates","term_name":"pole plasm oskar mRNA localization","termid":"GO:0045451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pole plasm oskar mRNA localization","synonyms":[{"name":"activation of pole plasm oskar mRNA localization","type":"narrow"},{"name":"positive regulation of oocyte pole plasm oskar mRNA localization","type":"exact"},{"name":"positive regulation of pole plasm oskar mRNA localisation","type":"exact"},{"name":"stimulation of pole plasm oskar mRNA localization","type":"narrow"},{"name":"up regulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"up-regulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"upregulation of pole plasm oskar mRNA localization","type":"exact"}],"termid":"GO:0045856"}


id: PBO:0071459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32","termid":"PBO:0071459"}


id: PBO:0082180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGC family protein kinase; functional ortholog of mammalian S6 kinase; phosphorylated by Tor1p and required for TORC1-mediated regulation of ribosome biogenesis, translation initiation, and entry into G0 phase; involved in transactivation of osmostress-responsive genes; regulates G1 progression, cAPK activity and nitrogen activation of the FGM pathway; integrates nutrient signals and stress signals from sphingolipids to regulate lifespan","termid":"PBO:0082180"}


id: GO:2000899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a xyloglucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"xyloglucan metabolic process","termid":"GO:0010411"},{"relation_name":"is_a","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"xyloglucan catabolic process","synonyms":[{"name":"xyloglucan catabolism","type":"exact"}],"termid":"GO:2000899"}


id: GO:0097590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility due to the motion of one or more archaeal-type flagella. An archaeal-type flagellum (also called archaellum) is a non-membrane-bounded organelle superficially similar to a bacterial-type flagellum, but having a different molecular structure and lacking a central channel.","definition_xrefs":["GOC:krc","Wikipedia:Flagellum#Archaeal","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"archaeal or bacterial-type flagellum-dependent cell motility","termid":"GO:0097588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"archaeal-type flagellum-dependent cell motility","synonyms":[{"name":"archaeal-type flagellar cell motility","type":"related"}],"termid":"GO:0097590"}


id: PBO:0054683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2091","termid":"PBO:0054683"}


id: GO:0035367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:sl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of thymine transport","termid":"GO:0035365"},{"relation_name":"positively_regulates","term_name":"thymine transport","termid":"GO:0035364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of thymine transport","synonyms":[{"name":"positive regulation of 5-methyluracil transport","type":"exact"}],"termid":"GO:0035367"}


id: GO:0036346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-cysteine stimulus. L-cysteine is an optically active form of cysteine having L-configuration.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"response to L-cysteine","termid":"GO:1901367"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-cysteine","termid":"GO:0036346"}


id: PBO:0001143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp2","termid":"PBO:0001143"}


id: PR:O94579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04818","PANTHER:PTHR11599:SF16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.06","secondary_identifiers":["UniProtKB:O94579"],"synonyms":[{"name":"Spom972h-PSMA2","type":"exact"}],"termid":"PR:O94579"}


id: PBO:0031387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_sulfite","termid":"PBO:0031387"}


id: PBO:0005385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 5","termid":"PBO:0005385"}


id: GO:0038178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a C5a component of the complement pathway binding to a complement receptor, and ending with regulation of a downstream cellular process. C5a is a peptide derived from the C5 complement factor.","definition_xrefs":["PMID:15313431","Wikipedia:Complement_component_5a","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement receptor mediated signaling pathway","termid":"GO:0002430"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"complement component C5a signaling pathway","synonyms":[{"name":"complement component C5a-induced signaling pathway","type":"exact"}],"termid":"GO:0038178"}


id: MONDO:0957494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory disease, multisystem, with immune dysregulation, X-linked","secondary_identifiers":["MEDGEN:1840213","OMIM:301109","UMLS:C5829577"],"termid":"MONDO:0957494","xrefs":{"Monarch":{"xref_id":"0957494"}}}


id: GO:0018042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-histidine amide by hydrolysis and oxidation of an interior His-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0089"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-histidine amidation (obsolete GO:0018042)","termid":"GO:0018042"}


id: GO:0072490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving toluene, methylbenzene (formula C7H8), or any of its derivatives.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene-containing compound metabolic process","synonyms":[{"name":"toluene and derivative metabolic process","type":"exact"},{"name":"toluene-containing compound metabolism","type":"exact"}],"termid":"GO:0072490"}


id: PBO:0060933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFATC2IP antisense RNA 1","termid":"PBO:0060933"}


id: GO:0022623
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homohexameric complex that recognizes and unfolds core proteasome substrate proteins, and translocates them to the core complex in an ATP dependent manner.","definition_xrefs":["PMID:19363223","GOC:bf","GOC:mtg_sensu","PMID:19481528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome accessory complex","termid":"GO:0022624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome-activating nucleotidase complex","synonyms":[{"name":"PAN","type":"exact"}],"termid":"GO:0022623"}


id: PBO:0027060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_endo-1,6-beta-glucosidase_activity","termid":"PBO:0027060"}


id: PBO:0064414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 8A","termid":"PBO:0064414"}


id: PBO:0004790
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic acidosis","termid":"PBO:0004790"}


id: PBO:0051054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2/OR15-2A (non-functional)","termid":"PBO:0051054"}


id: PBO:0110046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor Mtf2","termid":"PBO:0110046"}


id: PBO:0059331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6","termid":"PBO:0059331"}


id: GO:0033196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tryparedoxin + hydrogen peroxide = tryparedoxin disulfide + H2O.","definition_xrefs":["GOC:mah","PMID:32388269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tryparedoxin peroxidase activity","secondary_identifiers":["MetaCyc:1.11.1.15-RXN"],"synonyms":[{"name":"TXNPx activity","type":"exact"}],"termid":"GO:0033196"}


id: GO:0048296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of isotype switching to IgA isotypes","synonyms":[{"name":"regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"regulation of class switching to IgA isotypes","type":"exact"},{"name":"regulation of isotype switch recombination to IgA isotypes","type":"exact"}],"termid":"GO:0048296"}


id: GO:0106227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glutarylation of a lysine residue in a protein.","definition_xrefs":["GOC:sp","PMID:31542297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine glutarylation","termid":"GO:0106227"}


id: MONDO:0009646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial monosomy 7 syndrome","termid":"MONDO:0044645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"monosomy 7 myelodysplasia and leukemia syndrome 1","secondary_identifiers":["MEDGEN:381529","GARD:18505","MESH:C565370","NCIT:C176908","OMIM:252270","UMLS:C1854978"],"synonyms":[{"name":"M7MLS1","type":"exact"},{"name":"chromosome 7Q deletion","type":"exact"},{"name":"monosomy 7 of bone marrow","type":"exact"},{"name":"myelodysplasia and leukaemia syndrome with monosomy 7","type":"exact"},{"name":"myelodysplasia and leukemia syndrome with monosomy 7","type":"exact"}],"termid":"MONDO:0009646","xrefs":{"Monarch":{"xref_id":"0009646"}}}


id: PR:Q9UUI9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22F8.03c gene.","definition_xrefs":["UniProtKB:Q9UUI9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22F8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.03c","synonyms":[{"name":"Spom972h-SPAC22F8.03c","type":"exact"}],"termid":"PR:Q9UUI9"}


id: PR:O13933
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chitobiosyldiphosphodolichol beta-mannosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13036:SF0","OMA:SCHPO00419","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitobiosyldiphosphodolichol beta-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.14","secondary_identifiers":["UniProtKB:O13933"],"synonyms":[{"name":"GDP-Man:GlcNAc2-PP-dolichol mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GDP-mannose-dolichol diphosphochitobiose mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG1","type":"exact"},{"name":"asparagine-linked glycosylation protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta-1,4-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13933"}


id: MONDO:0017483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humeral agenesis/hypoplasia","termid":"MONDO:0017440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"humeral agenesis/hypoplasia, bilateral","secondary_identifiers":["Orphanet:295063"],"synonyms":[{"name":"humeral intercalary meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017483","xrefs":{"Monarch":{"xref_id":"0017483"}}}


id: MONDO:0013569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous or compound heterozygous mutation in the WDR35 gene on chromosome 2p21.1.","definition_xrefs":["PMID:21473986","DOID:0110090","PMID:17935248"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"asphyxiating thoracic dystrophy 3","termid":"MONDO:0013127"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 7 with or without polydactyly","secondary_identifiers":["UMLS:C3279792","GARD:15756","MEDGEN:481422","OMIM:614091","Orphanet:498497"],"synonyms":[{"name":"SRPS5","type":"exact"},{"name":"SRTD7","type":"exact"},{"name":"short rib-polydactyly syndrome type 5","type":"exact"},{"name":"short rib-polydactyly syndrome type V","type":"exact"},{"name":"short rib-polydactyly syndrome, type 5","type":"exact"},{"name":"short-rib thoracic dysplasia 7 with or without polydactyly","type":"exact"}],"termid":"MONDO:0013569","xrefs":{"Monarch":{"xref_id":"0013569"}}}


id: PBO:0072890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBNO1 antisense RNA 1","termid":"PBO:0072890"}


id: PBO:0081513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 419","termid":"PBO:0081513"}


id: GO:1901815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of astaxanthin.","definition_xrefs":["MetaCyc:PWY-5288","PMID:16434154","UniPathway:UPA00387","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"astaxanthin metabolic process","termid":"GO:1901813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"astaxanthin biosynthetic process","synonyms":[{"name":"astaxanthin anabolism","type":"exact"},{"name":"astaxanthin biosynthesis","type":"exact"},{"name":"astaxanthin formation","type":"exact"},{"name":"astaxanthin synthesis","type":"exact"}],"termid":"GO:1901815"}


id: MONDO:0004832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the lower part of the esophagus. It is the most common mesenchymal neoplasm of the esophagus. Dysphagia is a frequent clinical symptom.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of esophagus","termid":"MONDO:0021459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophagus leiomyoma","secondary_identifiers":["DOID:960","NCIT:C3866","SCTID:276805005","UMLS:C0238114","MEDGEN:65947"],"synonyms":[{"name":"esophageal leiomyoma","type":"exact"},{"name":"esophagus leiomyoma","type":"exact"},{"name":"leiomyoma of esophagus","type":"exact"},{"name":"leiomyoma of oesophagus","type":"exact"},{"name":"leiomyoma of the esophagus","type":"exact"},{"name":"leiomyoma of the oesophagus","type":"exact"}],"termid":"MONDO:0004832","xrefs":{"Monarch":{"xref_id":"0004832"}}}


id: GO:0140515
data:
  {"annotated_genes":["SJAG_03073","SJAG_00680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93338,100926],"is_not":false,"summary":null,"term":"GO:0140515"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle process which results in the assembly, arrangement, or disassembly of the mitotic nuclear bridge during closed mitosis.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic nuclear membrane organization","termid":"GO:0101024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic nuclear bridge organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140515","terms_by_termid":{"GO:0140515":null}}


id: GO:0033922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing N-acetylmuramic residues.","definition_xrefs":["EC:3.2.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptidoglycan beta-N-acetylmuramidase activity","secondary_identifiers":["MetaCyc:3.2.1.92-RXN"],"synonyms":[{"name":"beta-2-acetamido-3-O-(D-1-carboxyethyl)-2-deoxy-D-glucoside acetamidodeoxyglucohydrolase activity","type":"related"},{"name":"exo-beta-N-acetylmuramidase activity","type":"related"},{"name":"exo-beta-acetylmuramidase activity","type":"related"},{"name":"peptidoglycan beta-N-acetylmuramoylexohydrolase activity","type":"related"}],"termid":"GO:0033922"}


id: MONDO:0005402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant lymphocytic neoplasm of B-cell or T-cell lineage involving primarily the bone marrow and the peripheral blood. This category includes precursor or acute lymphoblastic leukemias and chronic leukemias.","definition_xrefs":["NCIT:C7539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"},{"relation_name":"is_a","term_name":"lymphoid neoplasm","termid":"MONDO:0005157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoid leukemia","secondary_identifiers":["UMLS:C0023448","EFO:0004289","ICD9:204.2","DOID:1037","ICD9:204","ICDO:981-983","MEDGEN:9728","SCTID:188726003","ICD9:204.20","HP:0005526","DOID:10747","ICDO:9820/3","MESH:D007945"],"synonyms":[{"name":"leukemia, LYMPHOCYTIC, malignant","type":"exact"},{"name":"lymphocytic leukaemia","type":"exact"},{"name":"lymphocytic leukemia","type":"exact"},{"name":"lymphogenous leukaemia","type":"exact"},{"name":"lymphogenous leukemia","type":"exact"},{"name":"lymphoid leukaemia (disease)","type":"exact"},{"name":"lymphoid leukemia","type":"exact"},{"name":"lymphoid leukemia (disease)","type":"exact"},{"name":"subacute lymphoid leukaemia","type":"exact"},{"name":"subacute lymphoid leukemia","type":"exact"}],"termid":"MONDO:0005402","xrefs":{"Monarch":{"xref_id":"0005402"}}}


id: PBO:0060271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 6","termid":"PBO:0060271"}


id: GO:0006019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into deoxyribose 5-phosphate to produce deoxyribose bisphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"is_a","term_name":"deoxyribose 5-phosphate metabolic process","termid":"GO:0046389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose 5-phosphate phosphorylation","termid":"GO:0006019"}


id: PBO:0085466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-mRNA splicing factor; facilitates the cooperative formation of U2/U6 helix II in association with stem II in the spliceosome, function may be regulated by Slu7p","termid":"PBO:0085466"}


id: PBO:0073696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle and kinetochore associated complex subunit 2","termid":"PBO:0073696"}


id: GO:1904515
data:
  {"annotated_genes":["SJAG_06588","SJAG_05030","SJAG_00143"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90704,97245,106461],"is_not":false,"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TORC2 signaling.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25590601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of TOR signaling","termid":"GO:0032008"},{"relation_name":"is_a","term_name":"regulation of TORC2 signaling","termid":"GO:1903939"},{"relation_name":"positively_regulates","term_name":"TORC2 signaling","termid":"GO:0038203"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_05030":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of TORC2 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of TORC2 signal transduction","type":"narrow"},{"name":"activation of TORC2 signaling","type":"narrow"},{"name":"positive regulation of TORC2 signal transduction","type":"exact"},{"name":"up regulation of TORC2 signal transduction","type":"exact"},{"name":"up regulation of TORC2 signaling","type":"exact"},{"name":"up-regulation of TORC2 signal transduction","type":"exact"},{"name":"up-regulation of TORC2 signaling","type":"exact"},{"name":"upregulation of TORC2 signal transduction","type":"exact"},{"name":"upregulation of TORC2 signaling","type":"exact"}],"termid":"GO:1904515","terms_by_termid":{"GO:1904515":null}}


id: PBO:0054359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1752","termid":"PBO:0054359"}


id: GO:0045767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of anti-apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of anti-apoptosis (obsolete GO:0045767)","synonyms":[{"name":"regulation of anti-apoptosis","type":"exact"}],"termid":"GO:0045767"}


id: GO:0034889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: endosulfan hemisulfate + H2O = endosulfan monoalcohol + 2 H+ + sulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endosulfan hemisulfate sulfatase activity (obsolete GO:0034889)","termid":"GO:0034889"}


id: GO:0019539
data:
  {"annotated_genes":["SJAG_04031","SJAG_00792","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93618,93610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[93564],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a siderophore from other compounds, including hydroxamic acid. Hydroxamate is one of the three major chemical groups incorporated into siderophore structures with catechol and a-hydroxycarboxylate, each having a high selectivity for iron(3+).","definition_xrefs":["PMID:20376388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"hydroxymate-containing siderophore biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0031197","GO:0031198"],"termid":"GO:0019539","terms_by_termid":{"GO:0031169":null,"GO:1905569":null}}


id: GO:0009132
data:
  {"annotated_genes":["SJAG_00839","SJAG_00885","SJAG_02369","SJAG_01310","SJAG_02874","SJAG_04849","SJAG_00633","SJAG_01595","SJAG_02945","SJAG_04495","SJAG_00027","SJAG_05314","SJAG_06621","SJAG_04192","SJAG_02247","SJAG_04334","SJAG_04657","SJAG_03977","SJAG_02135","SJAG_02796","SJAG_02785","SJAG_00779","SJAG_03676","SJAG_02107","SJAG_04048","SJAG_02009","SJAG_00685","SJAG_02038","SJAG_00605","SJAG_03373","SJAG_00461","SJAG_04665","SJAG_03903","SJAG_06622","SJAG_03660","SJAG_03828","SJAG_03852"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99342],"is_not":false,"summary":null,"term":"GO:0009132"},{"annotations":[97627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[94030,108850,108848,115796,108853,102870,104926,108854,108852,108390,108387,108384,97494,103949,103126,104924,104925,108388,108389,108849,105294,105295,94517,108385,97772,108386,108851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[115021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[91945,106726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[91946,106727,94990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[117461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[117463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[101725,63936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046710"},{"annotations":[103951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[88123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[111027,97690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72605,75583],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[99822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009134"},{"annotations":[88726],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[112755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009191"},{"annotations":[115022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[113399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00779":null,"SJAG_00839":null,"SJAG_00885":null,"SJAG_01310":null,"SJAG_01595":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02874":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_04849":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"nucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009132","terms_by_termid":{"GO:0006096":null,"GO:0006110":null,"GO:0006172":null,"GO:0006225":null,"GO:0006227":null,"GO:0006233":null,"GO:0006240":null,"GO:0006256":null,"GO:0009132":null,"GO:0009134":null,"GO:0009191":null,"GO:0045820":null,"GO:0046704":null,"GO:0046705":null,"GO:0046710":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: GO:1905336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aggrephagy.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:pad","PMID:25686248","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macroautophagy","termid":"GO:0016242"},{"relation_name":"is_a","term_name":"regulation of aggrephagy","termid":"GO:1905335"},{"relation_name":"negatively_regulates","term_name":"aggrephagy","termid":"GO:0035973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"negative regulation of aggrephagy","synonyms":[{"name":"down regulation of aggrephagy","type":"exact"},{"name":"down-regulation of aggrephagy","type":"exact"},{"name":"downregulation of aggrephagy","type":"exact"},{"name":"inhibition of aggrephagy","type":"narrow"}],"termid":"GO:1905336"}


id: SO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The first base to be translated into protein.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_start","synonyms":[{"name":"coding start","type":"exact"},{"name":"translation initiation site","type":"exact"},{"name":"translation start","type":"related"}],"termid":"SO:0000323"}


id: FYPO:0003684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of any macromolecular complex present in a cell differs from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex","termid":"FYPO:0007316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered level of macromolecular complex during vegetative growth","synonyms":[{"name":"abnormal level of macromolecular complex during vegetative growth","type":"exact"},{"name":"altered level of macromolecular complex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003684"}


id: MONDO:0013001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete synesthesia (obsolete MONDO:0013001)","secondary_identifiers":["MESH:C562460","OMIM:612759"],"synonyms":[{"name":"Synsth","type":"related"},{"name":"synesthesia","type":"exact"}],"termid":"MONDO:0013001","xrefs":{"Monarch":{"xref_id":"0013001"}}}


id: MONDO:0007905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lip, hamartomatous","secondary_identifiers":["UMLS:C1835395","MEDGEN:331965","MESH:C563621","OMIM:151640"],"synonyms":[{"name":"enlargement of Lower lip","type":"related"},{"name":"lip, hamartomatous","type":"exact"}],"termid":"MONDO:0007905","xrefs":{"Monarch":{"xref_id":"0007905"}}}


id: GO:0071002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains the extensively base paired small nuclear RNAs U4atac and U6atac, a heptameric ring of Sm proteins associated with U4atac, the Lsm2-8 heptameric ring complex associated with U6atac, as well as several proteins that are unique to the U4atac snRNP or U6atac snRNPs, some of which remain associated with the U4atac/U6atac snRNA both while the U4atac snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:krc","GOC:mah","PMID:14685174","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U4atac/U6atac snRNP","termid":"GO:0071002"}


id: GO:0009012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = 3''-adenylylstreptomycin + diphosphate + H+.","definition_xrefs":["EC:2.7.7.47","RHEA:20245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside nucleotidyltransferase activity","termid":"GO:0034068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"aminoglycoside 3''-adenylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02226","MetaCyc:STREPTOMYCIN-3-ADENYLYLTRANSFERASE-RXN"],"synonyms":[{"name":"AAD (3'')","type":"related"},{"name":"ATP:streptomycin 3''-adenylyltransferase activity","type":"narrow"},{"name":"streptomycin 3''-adenylyltransferase activity","type":"narrow"}],"termid":"GO:0009012"}


id: GO:0042377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals.","definition_xrefs":["GOC:jl","PMID:24489112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"fat-soluble vitamin catabolic process","termid":"GO:0042363"},{"relation_name":"is_a","term_name":"vitamin K metabolic process","termid":"GO:0042373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"vitamin K catabolic process","synonyms":[{"name":"naphthoquinone catabolic process","type":"exact"},{"name":"naphthoquinone catabolism","type":"exact"},{"name":"vitamin K breakdown","type":"exact"},{"name":"vitamin K catabolism","type":"exact"},{"name":"vitamin K degradation","type":"exact"}],"termid":"GO:0042377"}


id: PBO:0043368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clusterin","termid":"PBO:0043368"}


id: GO:0071225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muramyl dipeptide","termid":"GO:0032495"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to muramyl dipeptide","termid":"GO:0071225"}


id: GO:0010061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates trichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of plant epidermal cell differentiation","termid":"GO:1903888"},{"relation_name":"is_a","term_name":"regulation of root morphogenesis","termid":"GO:2000067"},{"relation_name":"regulates","term_name":"trichoblast fate specification","termid":"GO:0010057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trichoblast fate specification","termid":"GO:0010061"}


id: GO:0002734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dendritic cell cytokine production","termid":"GO:0002731"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell cytokine production","termid":"GO:0002733"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"negatively_regulates","term_name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of myeloid dendritic cell cytokine production","synonyms":[{"name":"down regulation of myeloid dendritic cell cytokine production","type":"exact"},{"name":"down-regulation of myeloid dendritic cell cytokine production","type":"exact"},{"name":"downregulation of myeloid dendritic cell cytokine production","type":"exact"},{"name":"inhibition of myeloid dendritic cell cytokine production","type":"narrow"}],"termid":"GO:0002734"}


id: PBO:0040225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 1 pseudogene 1","termid":"PBO:0040225"}


id: PBO:0060251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 1","termid":"PBO:0060251"}


id: GO:0140836
data:
  {"annotated_genes":["SJAG_00342","SJAG_00150","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93849,105519,108501],"is_not":false,"summary":null,"term":"GO:0140836"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphoserine (position 5).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_03061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0004672","GO:0003824","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S5 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II C-terminal domain S5 kinase activity","type":"exact"}],"termid":"GO:0140836","terms_by_termid":{"GO:0140836":null}}


id: PBO:0113153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase, component of both Rpd3S and Rpd3L complexes; regulates transcription, silencing, autophagy and other processes by influencing chromatin remodeling; forms at least two different complexes which have distinct functions and members; Rpd3(L) recruitment to the subtelomeric region is regulated by interaction with the Hmt1p methyltransferase; delays late firing of single copy origins by opposing the Fkh1/2 origin activation pathway","termid":"PBO:0113153"}


id: PBO:0056942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9-2","termid":"PBO:0056942"}


id: GO:0090111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of COPII vesicle uncoating, the process in which COPII vesicle coat proteins are disassembled, and released.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"COPII vesicle uncoating","termid":"GO:0090112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of COPII vesicle uncoating","termid":"GO:0090111"}


id: FYPO:0002394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein acetylation during vegetative growth","termid":"FYPO:0002392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein acetylation during vegetative growth","synonyms":[{"name":"decreased protein acetylation during mitotic cell cycle","type":"related"},{"name":"reduced protein acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002394"}


id: GO:0003937
data:
  {"annotated_genes":["SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118417],"is_not":false,"summary":null,"term":"GO:0003937"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide.","definition_xrefs":["EC:3.5.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohydrolase activity","termid":"GO:0019238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"IMP cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:IMPCYCLOHYDROLASE-RXN","RHEA:18445","Reactome:R-HSA-73797"],"synonyms":[{"name":"IMP 1,2-hydrolase (decyclizing)","type":"related"},{"name":"IMP synthetase activity","type":"related"},{"name":"inosinate cyclohydrolase activity","type":"related"},{"name":"inosinicase activity","type":"related"}],"termid":"GO:0003937","terms_by_termid":{"GO:0003937":null}}


id: PBO:0080443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrae development associated","termid":"PBO:0080443"}


id: PBO:0035735
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0035735"}


id: GO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a myeloid dendritic cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"},{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell activation involved in immune response","synonyms":[{"name":"myeloid dendritic cell activation during immune response","type":"related"}],"termid":"GO:0002277"}


id: MONDO:0004472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast adenocarcinoma characterized by the presence of tall columnar neoplastic cells that contain intracytoplasmic mucin. Grossly, cystic changes are not identified.","definition_xrefs":["NCIT:C40355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast mucinous carcinoma","termid":"MONDO:0002707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast columnar cell mucinous carcinoma","secondary_identifiers":["MEDGEN:307307","DOID:8130","UMLS:C1511305"],"synonyms":[{"name":"breast columnar cell mucinous carcinoma","type":"exact"}],"termid":"MONDO:0004472","xrefs":{"Monarch":{"xref_id":"0004472"}}}


id: MONDO:0019593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XX disorder of sex development induced by fetal androgens excess (obsolete MONDO:0019593)","secondary_identifiers":["Orphanet:90776"],"synonyms":[{"name":"46,XX DSD induced by fetal androgens excess","type":"exact"},{"name":"46,XX DSD induced by foetal androgens excess","type":"exact"}],"termid":"MONDO:0019593","xrefs":{"Monarch":{"xref_id":"0019593"}}}


id: PBO:0018078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper of TIM Hot15 (predicted)","termid":"PBO:0018078"}


id: GO:0030433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of steps necessary to target endoplasmic reticulum (ER)-resident proteins for degradation by the cytoplasmic proteasome. Begins with recognition of the ER-resident protein, includes retrotranslocation (dislocation) of the protein from the ER to the cytosol, protein ubiquitination necessary for correct substrate transfer, transport of the protein to the proteasome, and ends with degradation of the protein by the cytoplasmic proteasome.","definition_xrefs":["PMID:19520858","PMID:14607247","GOC:rb","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-dependent ERAD pathway (obsolete GO:0030433)","termid":"GO:0030433"}


id: PBO:0029224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_homologous_chromosome_pairing","termid":"PBO:0029224"}


id: GO:2000265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation, extrinsic pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"is_a","term_name":"regulation of blood coagulation, extrinsic pathway","termid":"GO:2000263"},{"relation_name":"positively_regulates","term_name":"blood coagulation, extrinsic pathway","termid":"GO:0007598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of blood coagulation, extrinsic pathway","termid":"GO:2000265"}


id: MONDO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cicatricial entropion","secondary_identifiers":["ICD9:374.04","MEDGEN:509840","SCTID:67383002","UMLS:C0155191","DOID:13113"],"termid":"MONDO:0001637","xrefs":{"Monarch":{"xref_id":"0001637"}}}


id: GO:1904380
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93048],"is_not":false,"summary":null,"term":"GO:1904380"}]},"cv_name":"biological_process","definition":"Any protein alpha-1,2-demannosylation that takes place in the endoplasmic reticulum quality control compartment (ERQC).","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","GO_REF:0000062","PMID:24519966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein alpha-1,2-demannosylation","termid":"GO:0036508"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum mannose trimming","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-901032"],"synonyms":[{"name":"ER mannose trimming","type":"exact"},{"name":"ER protein alpha-1,2-demannosylation","type":"exact"},{"name":"glycoprotein mannose trimming in ER quality control compartment","type":"related"},{"name":"glycoprotein mannose trimming in ER-derived quality control compartment","type":"related"},{"name":"glycoprotein mannose trimming in ERQC","type":"related"},{"name":"glycoprotein mannose trimming in endoplasmic reticulum quality control compartment","type":"related"},{"name":"protein alpha-1,2-demannosylation in ER","type":"exact"},{"name":"protein alpha-1,2-demannosylation in ER quality control compartment","type":"exact"},{"name":"protein alpha-1,2-demannosylation in ER-derived quality control compartment","type":"related"},{"name":"protein alpha-1,2-demannosylation in ERQC","type":"exact"},{"name":"protein alpha-1,2-demannosylation in endoplasmic reticulum","type":"exact"},{"name":"protein alpha-1,2-demannosylation in endoplasmic reticulum quality control compartment","type":"exact"}],"termid":"GO:1904380","terms_by_termid":{"GO:1904380":null}}


id: PBO:0085215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoylated vacuolar membrane-localized casein kinase I isoform; negatively regulates vacuole fusion during hypertonic stress via phosphorylation of Vps41p; shares essential functions with Hrr25p; regulates vesicle fusion in AP-3 pathway","termid":"PBO:0085215"}


id: _global:causally_downstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of causally upstream of or within","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"_global:causal_relation_between_processes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_downstream_of_or_within","secondary_identifiers":["RO:0002427"],"termid":"_global:causally_downstream_of_or_within"}


id: MOD:01733
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01733"}


id: PBO:0047863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(p24.2)","termid":"PBO:0047863"}


id: MONDO:0017169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple endocrine neoplasia (MEN) is a group of rare inherited cancer syndromes characterized by the development of two or more endocrine gland tumors, sometimes with tumor development in other tissues or organs.","definition_xrefs":["Orphanet:276161"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neoplastic syndrome","termid":"MONDO:0021058"},{"relation_name":"is_a","term_name":"multiple polyglandular tumor","termid":"MONDO:0015079"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple endocrine neoplasia","secondary_identifiers":["ICDO:8360/1","MESH:D009377","NCIT:C6432","MEDGEN:45036","MedDRA:10061299","SCTID:46724008","DOID:3125","ICD9:258.0","UMLS:C0027662","OMIMPS:131100","NANDO:2100148","GARD:21044"],"synonyms":[{"name":"MEN","type":"exact"},{"name":"men syndrome","type":"exact"},{"name":"men syndromes","type":"exact"},{"name":"multiple endocrine adenomatosis","type":"exact"},{"name":"multiple endocrine neoplasia","type":"exact"},{"name":"multiple endocrine neoplasia syndrome","type":"exact"},{"name":"multiple endocrine neoplasia syndrome(s)","type":"exact"}],"termid":"MONDO:0017169","xrefs":{"Monarch":{"xref_id":"0017169"}}}


id: FYPO:0000016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"curved vegetative cell","synonyms":[{"name":"cell morphology, curved","type":"exact"},{"name":"comma-shaped cell","type":"exact"},{"name":"curved cell","type":"exact"},{"name":"curved cell during vegetative growth","type":"exact"},{"name":"curved vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000016"}


id: MOD:00019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-isoleucine.","definition_xrefs":["ChEBI:30009","DeltaMass:0","PubMed:6692818","RESID:AA0010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine residue","synonyms":[{"name":"(2S,3S)-2-amino-3-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-3-methylpentanoic acid","type":"exact"},{"name":"3-methyl-norvaline","type":"exact"},{"name":"Ile","type":"exact"},{"name":"Isoleucyl","type":"exact"},{"name":"L-erythro-isoleucine","type":"exact"},{"name":"L-isoleucine","type":"exact"},{"name":"alpha-amino-beta-methylvaleric acid","type":"exact"}],"termid":"MOD:00019"}


id: PR:Q10410
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TOM1-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00244","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor-binding protein C1F3.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.05","secondary_identifiers":["UniProtKB:Q10410"],"synonyms":[{"name":"Spom972h-TOM1L2","type":"exact"}],"termid":"PR:Q10410"}


id: PBO:0089093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide-nucleotide adenylyltransferase","termid":"PBO:0089093"}


id: PBO:0076628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TANK binding kinase 1","termid":"PBO:0076628"}


id: PATO:0001204
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001204 not enlarged (obsolete PATO:0001204)","termid":"PATO:0001204"}


id: FYPO:0006465
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mature non-coding RNA (ncRNA) measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total ncRNA or a specific ncRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"altered mature ncRNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"abnormal ncRNA level during vegetative growth","type":"broad"},{"name":"altered cellular mature ncRNA level during vegetative growth","type":"exact"},{"name":"altered mature ncRNA level during mitotic cell cycle","type":"related"},{"name":"altered mature ncRNA transcript level during vegetative growth","type":"exact"},{"name":"altered mature non-coding RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006465","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: GO:0033391
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182).","definition_xrefs":["PMID:17183363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromatoid body","termid":"GO:0033391"}


id: PBO:0062029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily R member 1, pseudogene","termid":"PBO:0062029"}


id: PBO:0052070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 14","termid":"PBO:0052070"}


id: PBO:0003897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3210 family protein","termid":"PBO:0003897"}


id: PBO:0063243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 8","termid":"PBO:0063243"}


id: PBO:0078753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 44 homolog","termid":"PBO:0078753"}


id: PBO:0079424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 7","termid":"PBO:0079424"}


id: FYECO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which valproic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ valproic acid","synonyms":[{"name":"valproic acid added","type":"exact"}],"termid":"FYECO:0000413"}


id: GO:0071599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the otic vesicle over time, from its formation to the mature structure. The otic vesicle is a transient embryonic structure formed during development of the vertebrate inner ear.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"inner ear development","termid":"GO:0048839"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic vesicle development","termid":"GO:0071599"}


id: PR:Q86ZU7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox1102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q86ZU7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rsm22-cox11 tandem protein 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.13","synonyms":[{"name":"Spom972h-cox1102","type":"exact"}],"termid":"PR:Q86ZU7"}


id: GO:2000842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dehydroepiandrosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"regulation of dehydroepiandrosterone secretion","termid":"GO:2000840"},{"relation_name":"positively_regulates","term_name":"dehydroepiandrosterone secretion","termid":"GO:0035942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dehydroepiandrosterone secretion","synonyms":[{"name":"positive regulation of 3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"positive regulation of DHEA secretion","type":"exact"},{"name":"positive regulation of dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:2000842"}


id: GO:0038087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to an alpha-type platelet-derived growth factor receptor (PDGFR) on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:17470632","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"VEGF-activated platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"VEGF-A/PDGFRalpha signaling","type":"narrow"},{"name":"VEGF-activated PDGFRalpha signalling pathway","type":"exact"},{"name":"VEGF-activated platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"},{"name":"VEGF/PDGFRalpha signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor-activated platelet-derived growth factor receptor-alpha signaling pathway","type":"exact"}],"termid":"GO:0038087"}


id: FYPO:0005620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains sumoylated proteins that have longer poly-SUMO chains than normal.","definition_xrefs":["PMID:22730331","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased SUMO chain length","synonyms":[{"name":"increased SUMO chain length during mitotic cell cycle","type":"related"},{"name":"increased SUMO chain length during vegetative growth","type":"exact"},{"name":"increased sumoylated protein SUMO chain length","type":"exact"}],"termid":"FYPO:0005620"}


id: GO:0033897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ribonucleotidyl-ribonucleotide-RNA + H2O = a 3'-end 3'-phospho-ribonucleotide-RNA + a 5'-end dephospho-ribonucleoside-RNA + H+. This reaction is a two-stage endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.19","RHEA:68052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0016829","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"ribonuclease T2 activity","secondary_identifiers":["MetaCyc:3.1.27.5-RXN"],"synonyms":[{"name":"Escherichia coli ribonuclease I' ribonuclease PP2 activity","type":"exact"},{"name":"Escherichia coli ribonuclease II activity","type":"related"},{"name":"RNAase CL activity","type":"exact"},{"name":"RNase (non-base specific) activity","type":"exact"},{"name":"RNase II activity","type":"broad"},{"name":"RNase M activity","type":"related"},{"name":"RNase Ms activity","type":"exact"},{"name":"RNase T2 activity","type":"related"},{"name":"acid RNase activity","type":"exact"},{"name":"acid ribonuclease activity","type":"exact"},{"name":"base-non-specific ribonuclease activity","type":"exact"},{"name":"non-base specific ribonuclease activity","type":"exact"},{"name":"nonbase-specific RNase activity","type":"exact"},{"name":"nonspecific RNase activity","type":"exact"},{"name":"ribonnuclease (non-base specific) activity","type":"exact"},{"name":"ribonuclease (non-base specific) activity","type":"related"},{"name":"ribonuclease II activity","type":"broad"},{"name":"ribonuclease M activity","type":"exact"},{"name":"ribonuclease N2 activity","type":"exact"},{"name":"ribonuclease PP3 activity","type":"related"},{"name":"ribonuclease U4 activity","type":"exact"},{"name":"ribonucleate 3'-oligonucleotide hydrolase activity","type":"exact"},{"name":"ribonucleate nucleotido-2'-transferase (cyclizing) activity","type":"broad"}],"termid":"GO:0033897"}


id: GO:1901340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of store-operated calcium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium channel activity","termid":"GO:1901339"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of store-operated calcium channel activity","synonyms":[{"name":"down regulation of store-operated calcium channel activity","type":"exact"},{"name":"down-regulation of store-operated calcium channel activity","type":"exact"},{"name":"downregulation of store-operated calcium channel activity","type":"exact"},{"name":"inhibition of store-operated calcium channel activity","type":"narrow"}],"termid":"GO:1901340"}


id: MONDO:0012846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"generalized epilepsy with febrile seizures plus","termid":"MONDO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus, type 6","secondary_identifiers":["UMLS:C2677078","DOID:0111300","GARD:18663","MEDGEN:394198","MESH:C567371","OMIM:612279"],"synonyms":[{"name":"GEFSP6","type":"exact"},{"name":"Gefs+, type 6","type":"related"},{"name":"generalized epilepsy with febrile seizures plus, type 6","type":"exact"}],"termid":"MONDO:0012846","xrefs":{"Monarch":{"xref_id":"0012846"}}}


id: MONDO:0014490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid and ketone body metabolism","termid":"MONDO:0019223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"ketoacidosis due to monocarboxylate transporter-1 deficiency","secondary_identifiers":["UMLS:C4015186","Orphanet:438075","MEDGEN:863623","GARD:17733","OMIM:616095"],"synonyms":[{"name":"MCT1D","type":"related"},{"name":"monocarboxylate transporter 1 deficiency","type":"related"}],"termid":"MONDO:0014490","xrefs":{"Monarch":{"xref_id":"0014490"}}}


id: PBO:0072528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 57","termid":"PBO:0072528"}


id: PBO:0044725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 13 (pseudogene)","termid":"PBO:0044725"}


id: MONDO:0019769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Renpenning syndrome","termid":"MONDO:0010653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Sutherland-Haan type","secondary_identifiers":["MEDGEN:1842836","GARD:19242","Orphanet:93950","UMLS:C5681613"],"termid":"MONDO:0019769","xrefs":{"Monarch":{"xref_id":"0019769"}}}


id: GO:0044172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex system of membrane-bounded compartments located between host cell endoplasmic reticulum (ER) and the host Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum-Golgi intermediate compartment","synonyms":[{"name":"host ER-Golgi intermediate compartment","type":"exact"},{"name":"host cell ER-Golgi intermediate compartment","type":"exact"}],"termid":"GO:0044172"}


id: GO:0010857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Calcium-dependent catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-dependent protein kinase activity (obsolete GO:0010857)","termid":"GO:0010857"}


id: MONDO:0017710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital systemic veins anomaly (obsolete MONDO:0017710)","secondary_identifiers":["Orphanet:3091"],"termid":"MONDO:0017710","xrefs":{"Monarch":{"xref_id":"0017710"}}}


id: GO:0047099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD(P)+ + CDP-4-dehydro-3,6-dideoxy-D-glucose = NAD(P)H + CDP-4-dehydro-6-deoxy-D-glucose.","definition_xrefs":["MetaCyc:1.17.1.1-RXN","EC:1.17.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"CDP-4-dehydro-6-deoxyglucose reductase activity","synonyms":[{"name":"CDP-4-dehydro-3,6-dideoxy-D-glucose:NAD(P)+ 3-oxidoreductase activity","type":"related"},{"name":"CDP-4-keto-6-deoxy-D-glucose-3-dehydrogenase system activity","type":"related"},{"name":"CDP-4-keto-6-deoxyglucose reductase activity","type":"related"},{"name":"CDP-4-keto-deoxy-glucose reductase activity","type":"related"},{"name":"NAD(P)H:CDP-4-keto-6-deoxy-D-glucose oxidoreductase activity","type":"related"},{"name":"cytidine diphosphate 4-keto-6-deoxy-D-glucose-3-dehydrogenase activity","type":"related"},{"name":"cytidine diphospho-4-keto-6-deoxy-D-glucose reductase activity","type":"related"}],"termid":"GO:0047099"}


id: _global:biotically_interacts_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"An interaction relationship in which at least one of the partners is an organism and the other is either an organism or an abiotic entity with which the organism interacts.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"_global:ecologically_related_to"},{"relation_name":"is_a","term_name":"interacts_with","termid":"_global:interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotically_interacts_with","secondary_identifiers":["RO:0002437"],"termid":"_global:biotically_interacts_with"}


id: PR:O74806
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-tRNA hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03512","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.15c","secondary_identifiers":["UniProtKB:O74806"],"synonyms":[{"name":"PTH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PTRH1","type":"exact"}],"termid":"PR:O74806"}


id: GO:0043156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Structural changes to eukaryotic chromatin occurring as a result of cation stress, an increase or decrease in the concentration of positively charged ions in the environment.","definition_xrefs":["PMID:14762213","GOC:jl","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin remodeling in response to cation stress (obsolete GO:0043156)","termid":"GO:0043156"}


id: PBO:0082939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic DEAD-box helicase and mRNA decapping activator; interacts with decapping and deadenylase complexes to coordinate mRNA decapping and decay; regulates general translational repression; translational activator of select mRNAs during filamentous growth, mating and autophagy; cooperates with Ngr1p to promote specific mRNA decay; ATP- and RNA-bound form promotes processing body assembly, while ATPase stimulation by Not1p promotes disassembly; forms cytoplasmic foci on replication stress","termid":"PBO:0082939"}


id: GO:0030035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a microspike, a dynamic, actin-rich projection extending from the surface of a migrating animal cell.","definition_xrefs":["PMID:19095735","PMID:11429692","ISBN:0815316194","PMID:12153987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"microspike assembly","synonyms":[{"name":"microspike biogenesis","type":"related"},{"name":"microspike biosynthesis","type":"exact"},{"name":"microspike formation","type":"exact"}],"termid":"GO:0030035"}


id: PBO:0081519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 428","termid":"PBO:0081519"}


id: PBO:0001536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Mus7/Mms22","termid":"PBO:0001536"}


id: GO:0044500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant decrease of the force with which blood travels through the circulatory system of the bitten/stung organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:19837656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood pressure in another organism","termid":"GO:0044498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of blood pressure in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of blood pressure in other organism","type":"exact"},{"name":"hypotensive activity in other organism","type":"exact"}],"termid":"GO:0044500"}


id: GO:0039678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into the host cell through the host cell envelope. Occurs in non-enveloped prokaryotic viruses. Caudovirales carry an ejection apparatus that can be long and contractile, long and noncontractile, or short, and is able to penetrate the host cell envelope to deliver the viral genome into the host cell cytoplasm.","definition_xrefs":["PMID:23385786","GOC:ch","PMID:31663016","VZ:986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome ejection through host cell envelope","synonyms":[{"name":"phage genome ejection","type":"narrow"},{"name":"viral genome ejection through host cell envelope","type":"related"},{"name":"viral genome injection through bacterial membranes","type":"narrow"}],"termid":"GO:0039678"}


id: GO:0016921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of the N-terminal pyroglutamyl group from pGlu-His-Xaa tripeptides and pGlu-His-Xaa-Gly tetrapeptides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyroglutamyl-peptidase II activity (obsolete GO:0016921)","synonyms":[{"name":"pyroglutamyl-peptidase II activity","type":"exact"}],"termid":"GO:0016921"}


id: FYPO:0000092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to amiodarone. Cells stop growing (and may die) at a concentration of amiodarone that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to amiodarone","synonyms":[{"name":"hypersensitive to amiodarone","type":"exact"},{"name":"sensitive to amiodarone during mitotic cell cycle","type":"related"},{"name":"sensitive to amiodarone during vegetative growth","type":"exact"}],"termid":"FYPO:0000092"}


id: PBO:0069752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1035, pseudogene","termid":"PBO:0069752"}


id: PBO:0073678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 1","termid":"PBO:0073678"}


id: PBO:0071061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 63","termid":"PBO:0071061"}


id: FYPO:0003564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I is abnormal.","definition_xrefs":["GO:0042138","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"}


id: GO:0080075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a feruloyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"spermidine:feruloyl CoA N-acyltransferase activity","termid":"GO:0080075"}


id: PBO:0082599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin coat accessory factor; involved in clathrin-mediated vesicle trafficking; may function to link the AP-1 clathrin adaptor complex with the Rab GTPase Ypt31p; has structural similarity to G-proteins; mouse homolog Aagab (p34) functionally complements irc6 null mutation; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0082599"}


id: MONDO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete papilledema (obsolete MONDO:0002003)","termid":"MONDO:0002003","xrefs":{"Monarch":{"xref_id":"0002003"}}}


id: PR:Q9UUA2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent DNA helicase PIF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23274:SF0","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase pfh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.14c","secondary_identifiers":["UniProtKB:Q9UUA2"],"synonyms":[{"name":"DNA repair and recombination helicase pfh1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIF1 helicase homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RRM3/PIF1 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC887.14c","type":"related"},{"name":"Spom972h-PIF1","type":"exact"},{"name":"pif1","type":"related"},{"name":"rph1","type":"related"}],"termid":"PR:Q9UUA2"}


id: GO:0080104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylthiopropyl-glucosinolate = 5-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"5-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080104"}


id: GO:0008463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-methionine + H2O = L-methionine + formate.","definition_xrefs":["EC:3.5.1.31","RHEA:17781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"formylmethionine deformylase activity","secondary_identifiers":["KEGG_REACTION:R00653","MetaCyc:FORMYLMETHIONINE-DEFORMYLASE-RXN"],"synonyms":[{"name":"N-formyl-L-methionine amidohydrolase activity","type":"related"}],"termid":"GO:0008463"}


id: PBO:0067747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 46","termid":"PBO:0067747"}


id: MONDO:0014420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature due to primary acid-labile subunit (ALS) deficiency is characterized by moderate postnatal growth deficit, markedly low circulating levels of insulin-like growth factor 1 (IGF-1) and insulin-like growth factor binding protein 3 (IGFBP-3), and hyperinsulinemia, in the absence of growth hormone (GH) deficiency or GH insensitivity.","definition_xrefs":["Orphanet:140941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature due to primary acid-labile subunit deficiency","secondary_identifiers":["UMLS:C3900122","icd11.foundation:29735645","GARD:16964","MEDGEN:859716","OMIM:615961","SCTID:721074002"],"synonyms":[{"name":"ACLSD","type":"related"},{"name":"acid-labile SUBUNIT deficiency","type":"related"},{"name":"acid-labile subunit, deficiency of","type":"exact"}],"termid":"MONDO:0014420","xrefs":{"Monarch":{"xref_id":"0014420"}}}


id: GO:1905432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide.","definition_xrefs":["GOC:PARL","GO_REF:0000058","PMID:19448629","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trans-synaptic signaling","termid":"GO:0099177"},{"relation_name":"regulates","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of retrograde trans-synaptic signaling by neuropeptide","synonyms":[{"name":"regulation of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"}],"termid":"GO:1905432"}


id: PBO:0080611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 45 pseudogene 1","termid":"PBO:0080611"}


id: PBO:0003243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S16 (predicted)","termid":"PBO:0003243"}


id: MONDO:0009526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibular aplasia, tibial campomelia, and oligosyndactyly syndrome","secondary_identifiers":["GARD:2622","MESH:C565436","OMIM:246570","MEDGEN:340887","Orphanet:480773","UMLS:C1855499"],"synonyms":[{"name":"FATCO syndrome","type":"exact"},{"name":"fibular aplasia, tibial campomelia, and oligosyndactyly syndrome","type":"exact"},{"name":"fibular aplasia-tibial campomelia-oligosyndactyly syndrome","type":"exact"},{"name":"limb deficiency-heart malformation syndrome","type":"related"},{"name":"terminal transverse defects of the limbs associated with congenital heart malformations","type":"exact"}],"termid":"MONDO:0009526","xrefs":{"Monarch":{"xref_id":"0009526"}}}


id: GO:0047694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: barbiturate + H2O = malonate + urea.","definition_xrefs":["EC:3.5.2.1","MetaCyc:BARBITURASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"barbiturase activity","secondary_identifiers":["RHEA:18653"],"synonyms":[{"name":"barbiturate amidohydrolase (3-oxo-3-ureidopropanoate-forming)","type":"related"}],"termid":"GO:0047694"}


id: PBO:0038343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_eggs_laid_on_by","termid":"PBO:0038343"}


id: PBO:0015673
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human EIF3I","termid":"PBO:0015673"}


id: PBO:0000581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase Trm12 (predicted)","termid":"PBO:0000581"}


id: FYPO:0000394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1/S transition of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic G1/S phase transition","synonyms":[{"name":"abnormal G1/S phase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle progression through the G1/S phase transition","type":"exact"},{"name":"abnormal mitotic G1/S cell cycle phase transition","type":"exact"},{"name":"abnormal mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle G1/S phase transition","type":"exact"},{"name":"cell cycle progression through the G1/S phase transition: abnormal","type":"related"}],"termid":"FYPO:0000394"}


id: GO:0034028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole + ATP + bicarbonate = 5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole + ADP + 3 H+ + phosphate.","definition_xrefs":["RHEA:19317","EC:6.3.4.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"5-(carboxyamino)imidazole ribonucleotide synthase activity","secondary_identifiers":["MetaCyc:RXN0-742","KEGG_REACTION:R07404"],"synonyms":[{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole:carbon-dioxide ligase (ADP-forming) activity","type":"related"},{"name":"N5-CAIR synthetase activity","type":"related"},{"name":"N5-carboxyaminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"PurK","type":"related"}],"termid":"GO:0034028"}


id: PR:O59834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-specific adenosine deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.14c","secondary_identifiers":["UniProtKB:O59834"],"synonyms":[{"name":"Spom972h-tadA","type":"exact"},{"name":"cytosine aminohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59834"}


id: PBO:0083867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein and component of SCF ubiquitin ligase complexes; involved in ubiquitin-dependent protein catabolism; readily monoubiquitinated in vitro by SCF-Ubc4 complexes; SCF-Ucc1 regulates level of Cit2 citrate synthase protein to maintain citrate homeostasis, acts as metabolic switch for glyoxylate cycle; UCC1 transcription is downregulated in cells grown on C2-compounds","termid":"PBO:0083867"}


id: PBO:0086674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF is contained within RDN25-2 and RDN37-2","termid":"PBO:0086674"}


id: PBO:0113135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General amino acid permease; involved in uptake of all L-amino acids, some D-amino acids, related compounds, toxic analogs and polyamines; regulated by nitrogen source; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; essential for invasive growth","termid":"PBO:0113135"}


id: GO:1901897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:19708671","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"}


id: PBO:0004783
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae YJR086W is not functional ortholog","termid":"PBO:0004783"}


id: GO:0048360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur in the root cap; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root cap mucilage metabolic process","synonyms":[{"name":"root cap mucilage metabolism","type":"exact"}],"termid":"GO:0048360"}


id: PBO:0040740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 6","termid":"PBO:0040740"}


id: PBO:0044681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible transcript 4","termid":"PBO:0044681"}


id: PATO:0001324
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's being symmetric about a plane running from its frontal end to its caudal end (head to tail), and has nearly identical right and left halves.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Bilateral_symmetry"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral symmetry","synonyms":[{"name":"left-right symmetry","type":"exact"}],"termid":"PATO:0001324"}


id: PBO:0057331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520f","termid":"PBO:0057331"}


id: PBO:0077141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 1 pseudogene 1","termid":"PBO:0077141"}


id: PBO:0031377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle","termid":"PBO:0031377"}


id: MONDO:0009700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Carey-Fineman-Ziter syndrome (obsolete MONDO:0009700)","termid":"MONDO:0009700","xrefs":{"Monarch":{"xref_id":"0009700"}}}


id: PBO:0034660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_from_kinetochore_to_spindle_during_meiosis_I","termid":"PBO:0034660"}


id: MONDO:1010478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arrhythmogenic right ventricular cardiomyopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arrhythmogenic right ventricular cardiomyopathy, non-human animal","termid":"MONDO:1010019"},{"relation_name":"is_a","term_name":"cardiomyopathy, dog","termid":"MONDO:1010441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmogenic right ventricular cardiomyopathy, dog","secondary_identifiers":["OMIA:000878-9615"],"termid":"MONDO:1010478","xrefs":{"Monarch":{"xref_id":"1010478"}}}


id: PBO:0053157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low density lipoprotein receptor","termid":"PBO:0053157"}


id: PBO:0063386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 5","termid":"PBO:0063386"}


id: GO:0015171
data:
  {"annotated_genes":["SJAG_02150","SJAG_04718","SJAG_00015","SJAG_02946","SJAG_00877","SJAG_02029","SJAG_04957","SJAG_02062","SJAG_03256","SJAG_03829","SJAG_02113","SJAG_00019","SJAG_02133","SJAG_06598","SJAG_02947","SJAG_01770","SJAG_00522","SJAG_04637","SJAG_05342","SJAG_02941","SJAG_03400","SJAG_01096","SJAG_01998","SJAG_02955","SJAG_04295","SJAG_04984","SJAG_04588","SJAG_04296","SJAG_02144","SJAG_00149","SJAG_04787","SJAG_03899","SJAG_04903","SJAG_04135","SJAG_00051","SJAG_03827","SJAG_04725","SJAG_00543","SJAG_01994","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75080,76215,77272,87088,87089,87090,87091,87092,87093,87094,87095,87128,87129,87130,87131,89218,99518,103013,103253,105503,108890,108897,110040,113139,117696,117697,117698,117699,117700,117701,117702,117703,117794,117888,118440],"is_not":false,"summary":null,"term":"GO:0015171"},{"annotations":[89911,94099,95204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015174"},{"annotations":[113134,118443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[97731,99733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[95529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[95530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015179"},{"annotations":[103325,99854,96864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[102290,109487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[96066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[103326,97732,96067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[103327,96865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[109488,102291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[96866,103328,102292,99855,109489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[107373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[99847,100706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[90132,103329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[103330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00015":null,"SJAG_00019":null,"SJAG_00051":null,"SJAG_00149":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00877":null,"SJAG_01096":null,"SJAG_01770":null,"SJAG_01994":null,"SJAG_01998":null,"SJAG_02029":null,"SJAG_02062":null,"SJAG_02113":null,"SJAG_02133":null,"SJAG_02144":null,"SJAG_02150":null,"SJAG_02941":null,"SJAG_02946":null,"SJAG_02947":null,"SJAG_02955":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03827":null,"SJAG_03829":null,"SJAG_03899":null,"SJAG_04135":null,"SJAG_04295":null,"SJAG_04296":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04787":null,"SJAG_04903":null,"SJAG_04957":null,"SJAG_04984":null,"SJAG_05342":null,"SJAG_06598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5659734","Reactome:R-HSA-5659755","Reactome:R-HSA-352371","Reactome:R-HSA-352136","Reactome:R-HSA-5653850","Reactome:R-HSA-5655702","Reactome:R-HSA-5660694","Reactome:R-HSA-5660910","Reactome:R-HSA-8952726","Reactome:R-HSA-352059","Reactome:R-HSA-212642","Reactome:R-HSA-351987","Reactome:R-HSA-352191","Reactome:R-HSA-352158","Reactome:R-HSA-375790","Reactome:R-HSA-352182","Reactome:R-HSA-352232","Reactome:R-HSA-352379","Reactome:R-HSA-352108","Reactome:R-HSA-379415","Reactome:R-HSA-352052","Reactome:R-HSA-352107","Reactome:R-HSA-888592","Reactome:R-HSA-379426","Reactome:R-HSA-375473","Reactome:R-HSA-375487","Reactome:R-HSA-351963","Reactome:R-HSA-352385","Reactome:R-HSA-210439","Reactome:R-HSA-376200","Reactome:R-HSA-352354","Reactome:R-HSA-375417","Reactome:R-HSA-5660890","Reactome:R-HSA-352364","Reactome:R-HSA-378513","Reactome:R-HSA-375768","Reactome:R-HSA-375770","Reactome:R-HSA-352029","Reactome:R-HSA-352103","Reactome:R-HSA-375776","GO:0015359","Reactome:R-HSA-379432","Reactome:R-HSA-5659674","Reactome:R-HSA-352174","Reactome:R-HSA-352119","Reactome:R-HSA-375405","Reactome:R-HSA-352347"],"synonyms":[{"name":"amino acid permease activity","type":"exact"},{"name":"amino acid transporter activity","type":"broad"},{"name":"amino acid/choline transmembrane transporter activity","type":"narrow"},{"name":"general amino acid permease activity","type":"related"},{"name":"hydroxy/aromatic amino acid permease activity","type":"related"}],"termid":"GO:0015171","terms_by_termid":{"GO:0000064":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0015171":null,"GO:0015174":null,"GO:0015179":null,"GO:0015182":null,"GO:0015183":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0033229":null,"GO:0034639":null,"GO:0061459":null}}


id: PBO:0091403
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CET1 when coexpressed with pombe ceg1","termid":"PBO:0091403"}


id: GO:0046694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the use of stored sperm from the first-mating male is inhibited by the seminal fluid of subsequently mating males.","definition_xrefs":["PMID:10440373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm competition","termid":"GO:0046692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm incapacitation","termid":"GO:0046694"}


id: PBO:0051451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-39","termid":"PBO:0051451"}


id: PBO:0004718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb7","termid":"PBO:0004718"}


id: PBO:0038479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 4","termid":"PBO:0038479"}


id: GO:0000711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template.","definition_xrefs":["PMID:9334324","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic DNA repair synthesis","termid":"GO:0000711"}


id: GO:0045339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of farnesyl diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"},{"relation_name":"is_a","term_name":"farnesyl diphosphate metabolic process","termid":"GO:0045338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"farnesyl diphosphate catabolic process","synonyms":[{"name":"farnesyl diphosphate breakdown","type":"exact"},{"name":"farnesyl diphosphate catabolism","type":"exact"},{"name":"farnesyl diphosphate degradation","type":"exact"}],"termid":"GO:0045339"}


id: PBO:0050618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 10","termid":"PBO:0050618"}


id: MONDO:1010602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypothyroidism that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, dog","secondary_identifiers":["OMIA:000536-9615"],"termid":"MONDO:1010602","xrefs":{"Monarch":{"xref_id":"1010602"}}}


id: PBO:0053141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6C, pseudogene","termid":"PBO:0053141"}


id: PBO:0052217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium sodium-activated channel subfamily T member 1","termid":"PBO:0052217"}


id: PBO:0067353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 451, pseudogene","termid":"PBO:0067353"}


id: PATO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"growth rate","termid":"PATO:0001492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrophic growth","termid":"PATO:0001494"}


id: GO:0019537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vibriobactin, the major siderophore produced by Vibrio cholerae.","definition_xrefs":["GOC:jl","PMID:11112537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vibriobactin metabolic process","termid":"GO:0019536"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"vibriobactin biosynthetic process","secondary_identifiers":["GO:0031195","GO:0031196"],"synonyms":[{"name":"vibriobactin anabolism","type":"exact"},{"name":"vibriobactin biosynthesis","type":"exact"},{"name":"vibriobactin biosynthetic process, peptide formation","type":"narrow"},{"name":"vibriobactin biosynthetic process, peptide modification","type":"narrow"},{"name":"vibriobactin formation","type":"exact"},{"name":"vibriobactin synthesis","type":"exact"}],"termid":"GO:0019537"}


id: PBO:0047905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(8)(q22.1)","termid":"PBO:0047905"}


id: MONDO:0001263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An retinitis caused by infection with Histoplasma capsulatum.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Histoplasma capsulatum infectious disease","termid":"MONDO:0002099"},{"relation_name":"is_a","term_name":"retinitis","termid":"MONDO:0002708"},{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"},{"relation_name":"is_a","term_name":"fungal infection of eye","termid":"MONDO:0020944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"histoplasmosis retinitis","secondary_identifiers":["ICD9:115.92","MEDGEN:509240","SCTID:187058000","DOID:11316","UMLS:C0153278"],"synonyms":[{"name":"Histoplasma capsulatum caused retinitis","type":"exact"},{"name":"Histoplasma capsulatum retinitis","type":"exact"},{"name":"histoplasmosis with retinitis","type":"exact"}],"termid":"MONDO:0001263","xrefs":{"Monarch":{"xref_id":"0001263"}}}


id: PATO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female receptivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female receptivity","termid":"PATO:0001720"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased female receptivity","synonyms":[{"name":"low female receptivity","type":"exact"}],"termid":"PATO:0001724"}


id: PBO:0064588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member H","termid":"PBO:0064588"}


id: PBO:0003441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Erg28 protein (predicted)","termid":"PBO:0003441"}


id: GO:0047546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxypyridine + AH(2) + O2 = 2,5-dihydroxypyridine + A + H2O.","definition_xrefs":["RHEA:16973","EC:1.14.99.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-hydroxypyridine 5-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R03206","MetaCyc:2-HYDROXYPYRIDINE-5-MONOOXYGENASE-RXN"],"synonyms":[{"name":"2-hydroxypyridine oxygenase activity","type":"related"},{"name":"2-hydroxypyridine,hydrogen-donor:oxygen oxidoreductase (5-hydroxylating)","type":"related"}],"termid":"GO:0047546"}


id: GO:0070215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an isoform of the MDM2 protein, a negative regulator of p53.","definition_xrefs":["GOC:mah","GOC:nln"],"gene_count":0,"genotype_count":0,"name":"obsolete MDM2 binding (obsolete GO:0070215)","synonyms":[{"name":"MDM2 binding","type":"exact"}],"termid":"GO:0070215"}


id: MONDO:0012759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly syndrome, Guadalajara type 3 is a rare, genetic bone development disorder characterized by hand camptodactyly associated with facial dysmorphism (flat face, hypertelorism, telecanthus, symblepharon, simplified ears, retrognathia) and neck anomalies (short neck with stricking pterygia, muscle sclerosis). Additional features include spinal defects (e.g. cervical and dorso-lumbar spina bifida occulta), congenital shortness of the sternocleidomastoid muscle, flexed wrists and thin hands and feet. Brain structural anomalies, multiple nevi, micropenis and mild intellectual disability are also observed. Imaging reveals increased bone traveculae, cortical thickening of long bones and delayed bone age.","definition_xrefs":["Orphanet:488434"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"camptodactyly syndrome, Guadalajara","termid":"MONDO:0000111"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"camptodactyly syndrome, Guadalajara type 3","secondary_identifiers":["GARD:10573","UMLS:C2677809","MEDGEN:394371","MESH:C567455","OMIM:611929"],"synonyms":[{"name":"camptodactyly syndrome Guadalajara type 3","type":"related"},{"name":"camptodactyly syndrome, Guadalajara, type 3","type":"related"},{"name":"camptodactyly syndrome, Guadalajara, type III","type":"related"}],"termid":"MONDO:0012759","xrefs":{"Monarch":{"xref_id":"0012759"}}}


id: MONDO:1011198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypophosphatemic rickets in rabbits due to ablation of the DMP1 gene created using CRISPR/Cas9.","definition_xrefs":["OMIA:001542-9986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatemic rickets, DMP1-related, rabbit","synonyms":[{"name":"hypophosphatemic rickets, autosomal recessive, 1, rabbit","type":"related"}],"termid":"MONDO:1011198","xrefs":{"Monarch":{"xref_id":"1011198"}}}


id: MONDO:0009434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"MHC class I deficiency","termid":"MONDO:0011476"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypoproteinemia, hypercatabolic","secondary_identifiers":["DOID:0111981","GARD:15185","UMLS:C1855796","MESH:C565476","MEDGEN:343422","OMIM:241600"],"synonyms":[{"name":"B2M deficiency","type":"related"},{"name":"Beta-2-microglobulin deficiency","type":"related"},{"name":"IMD43","type":"related"},{"name":"hypoproteinemia, hypercatabolic","type":"exact"},{"name":"immunodeficiency 43","type":"related"}],"termid":"MONDO:0009434","xrefs":{"Monarch":{"xref_id":"0009434"}}}


id: MOD:01134
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein labelling of peptide N-terminal using NHS ester","termid":"MOD:01134"}


id: PBO:0083117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication initiation protein; loads DNA pol epsilon onto pre-replication complexes at origins; checkpoint sensor recruited to stalled replication forks by the checkpoint clamp complex where it activates Mec1p; along with Rfa1p, binds to ultrafine anaphase bridges in mitotic cells and prevents accumulation of chromatin bridges by stimulating the Mec1p kinase and suppressing homologous recombination; ortholog of human TopBP1; forms nuclear foci upon DNA replication stress","termid":"PBO:0083117"}


id: MONDO:0005668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypersensitivity granulomatous pneumonitis caused by the inhalation of avian antigens that are present in the dust of the droppings and feathers of many species of birds. In the acute phase it manifests as fever, chills, dyspnea, cough, and chest tightness. Chronic exposure may lead to interstitial lung fibrosis.","definition_xrefs":["NCIT:C34425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"},{"relation_name":"is_a","term_name":"occupational lung disease","termid":"MONDO:0022736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"bird fancier's lung","secondary_identifiers":["SCTID:69339004","ICD9:495.2","MESH:D001716","DOID:13891","MEDGEN:586","ICD10CM:J67.2","MedDRA:10004941","GARD:16924","Orphanet:99908","icd11.foundation:912113736","UMLS:C0005592"],"synonyms":[{"name":"Avian hypersensitivity pneumonitis","type":"exact"},{"name":"bird breeder's lung","type":"exact"},{"name":"bird fancier lung","type":"exact"},{"name":"bird fancier's lung","type":"exact"},{"name":"bird-breeder's lung","type":"related"},{"name":"bird-fancier's lung","type":"exact"},{"name":"bird-fanciers' lung","type":"exact"},{"name":"pigeon breeder's lung","type":"exact"},{"name":"pigeon-breeder lung disease","type":"exact"},{"name":"pigeon-breeder's lung","type":"exact"},{"name":"poultry worker's lung","type":"related"}],"termid":"MONDO:0005668","xrefs":{"Monarch":{"xref_id":"0005668"}}}


id: GO:0019530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.","definition_xrefs":["GOC:jl","ISBN:0198600461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"taurine metabolic process","synonyms":[{"name":"taurine metabolism","type":"exact"}],"termid":"GO:0019530"}


id: PBO:0054736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2145","termid":"PBO:0054736"}


id: GO:0048656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the anther wall tapetum. This process pertains to the initial formation of a structure from unspecified parts. The anther wall tapetum is a layer of cells that provides a source of nutrition for the pollen grains as they mature.","definition_xrefs":["GOC:sm","GOC:tb","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"stamen formation","termid":"GO:0048455"},{"relation_name":"part_of","term_name":"anther wall tapetum morphogenesis","termid":"GO:0048655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum formation","synonyms":[{"name":"tapetal layer formation","type":"broad"},{"name":"tapetum formation","type":"broad"}],"termid":"GO:0048656"}


id: PBO:0051853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 6","termid":"PBO:0051853"}


id: MONDO:0004745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent and usually painful erection that lasts for at least four hours in the absence of physical or psychological stimulation, which can be caused by hematologic disorders, including sickle cell disease and leukemia, spinal cord injuries, and medications.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vascular disease","termid":"MONDO:0005294"},{"relation_name":"is_a","term_name":"erectile dysfunction","termid":"MONDO:0005362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priapism","secondary_identifiers":["UMLS:C0033117","ICD10CM:N48.3","SCTID:6273006","GARD:19933","ICD9:607.3","icd11.foundation:1983776037","Orphanet:140949","MESH:D011317","DOID:9286","MEDGEN:19462"],"synonyms":[{"name":"low-flow priapism","type":"narrow"},{"name":"mentulagra","type":"exact"}],"termid":"MONDO:0004745","xrefs":{"Monarch":{"xref_id":"0004745"}}}


id: FYPO:0000757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nigericin. Cells stop growing (and may die) at a concentration of nigericin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to nigericin","synonyms":[{"name":"hypersensitive to nigericin","type":"exact"},{"name":"sensitive to nigericin during mitotic cell cycle","type":"related"},{"name":"sensitive to nigericin during vegetative growth","type":"exact"}],"termid":"FYPO:0000757"}


id: PBO:0078373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalase","termid":"PBO:0078373"}


id: MONDO:0014899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare multiple mitochondrial DNA deletion syndrome with markedly decreased deoxyguanosine kinase (DGUOK) activity in skeletal muscle characterized by a highly variable phenotype. Clinical manifestations include progressive external ophthalmoplegia, mitochondrial myopathy, recurrent rhabdomyolysis, lower motor neuron disease, mild cognitive impairment, sensory axonal neuropathy, optic atrophy, ataxia, hypogonadism and/or parkinsonism.","definition_xrefs":["Orphanet:329314"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"},{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 4","secondary_identifiers":["DOID:0111516","GARD:17501","OMIM:617070","SCTID:733599009","MEDGEN:934700","UMLS:C4310733"],"synonyms":[{"name":"PEOB4","type":"exact"},{"name":"adult-onset multiple mitochondrial DNA deletion syndrome due to DGUOK deficiency","type":"exact"},{"name":"adult-onset multiple mtDNA deletion syndrome due to DGUOK deficiency","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 4","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive type 4","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 4","type":"related"}],"termid":"MONDO:0014899","xrefs":{"Monarch":{"xref_id":"0014899"}}}


id: PBO:0064183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XJ, pseudogene","termid":"PBO:0064183"}


id: GO:0070956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070955"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of bacterium","synonyms":[{"name":"down regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"downregulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"inhibition of neutrophil mediated killing of bacterium","type":"narrow"}],"termid":"GO:0070956"}


id: GO:1900122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a protein or other molecule binding to a receptor.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor binding","synonyms":[{"name":"activation of receptor binding","type":"narrow"},{"name":"up regulation of receptor binding","type":"exact"},{"name":"upregulation of receptor binding","type":"exact"}],"termid":"GO:1900122"}


id: GO:0060971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the left/right axis of the embryonic heart tube in space to define an area or volume in which specific patterns of cell differentiation will take place.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left/right pattern formation","termid":"GO:0060972"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube left/right pattern formation","termid":"GO:0060971"}


id: FYPO:0000150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the morphology, i.e. the size, shape, or structure, of a colony growing on a solid surface is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"abnormal colony morphology","synonyms":[{"name":"colony shape: abnormal","type":"related"}],"termid":"FYPO:0000150"}


id: PBO:0049089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143 pseudogene","termid":"PBO:0049089"}


id: PBO:0086590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; exhibits homology to C-terminal end of Bul1p; expressed as a readthrough product of BSC5, the readthrough locus being termed BUL3; the BUL3 readthrough product is involved in ubiquitin-mediated sorting of plasma membrane proteins and interacts with WW domains of Rsp5p in vitro, but in a functionally different way than the non-readthrough form","termid":"PBO:0086590"}


id: PBO:0043957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma B","termid":"PBO:0043957"}


id: GO:1990533
data:
  {"annotated_genes":["SJAG_02601","SJAG_04283"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106641,115470],"is_not":false,"summary":null,"term":"GO:1990533"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of one subunit known as Dom34 or Pelota that has similarity to translation termination factor eRF1, and another subunit, Hbs1, that is a GTPase with similarity to translation termination factor eRF3. The Dom34-Hbs1 complex has a role in cotranslational mRNA quality control by promoting ribosomal subunit dissociation and peptidyl-tRNA release when translation is stalled, facilitating no-go decay and nonstop decay.","definition_xrefs":["GOC:mcc","PMID:20890290","PMID:21448132","PMID:22503425","PMID:21102444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02601":null,"SJAG_04283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Dom34-Hbs1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dom34:Hbs1 complex","type":"exact"}],"termid":"GO:1990533","terms_by_termid":{"GO:1990533":null}}


id: PR:O14110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aminomethyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01259","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.14","secondary_identifiers":["UniProtKB:O14110"],"synonyms":[{"name":"GCVT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AMT","type":"exact"},{"name":"glycine cleavage system T protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14110"}


id: MONDO:0009305
data:
  {"annotated_genes":["SJAG_02875"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84742],"is_not":false,"summary":null,"term":"MONDO:0009305"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02875":null},"genotype_count":0,"is_obsolete":false,"name":"granulocytopenia with immunoglobulin abnormality","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:233600","MEDGEN:383874","MESH:C565535","UMLS:C1856263","DOID:0111974"],"synonyms":[{"name":"granulocytopenia with immunoglobulin abnormality","type":"exact"},{"name":"immunodeficiency 59 and hypoglycemia","type":"exact"}],"termid":"MONDO:0009305","terms_by_termid":{"MONDO:0009305":null},"xrefs":{"Monarch":{"xref_id":"0009305"}}}


id: PBO:0050314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 16","termid":"PBO:0050314"}


id: PBO:0026708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_stalled_replication_fork","termid":"PBO:0026708"}


id: PBO:0003002
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.12.17","termid":"PBO:0003002"}


id: GO:1901649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of actomyosin contractile ring localization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actomyosin contractile ring localization (obsolete GO:1901649)","termid":"GO:1901649"}


id: MONDO:1011289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dacryocystitis that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dacryocystitis, non-human animal","termid":"MONDO:1010360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dacryocystitis, rabbit","secondary_identifiers":["OMIA:002610-9986"],"termid":"MONDO:1011289","xrefs":{"Monarch":{"xref_id":"1011289"}}}


id: PBO:0053239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL3 antisense RNA 2","termid":"PBO:0053239"}


id: FYPO:0000427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1 to G0 transition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal G1 to G0 transition","synonyms":[{"name":"abnormal G1/G0 transition","type":"exact"},{"name":"abnormal cell cycle quiescence","type":"related"},{"name":"abnormal establishment of cell quiescence","type":"exact"}],"termid":"FYPO:0000427"}


id: MONDO:0008432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ketone compounds, ability to smell (obsolete MONDO:0008432)","secondary_identifiers":["OMIM:182270"],"synonyms":[{"name":"ketone compounds, ability to smell","type":"exact"}],"termid":"MONDO:0008432","xrefs":{"Monarch":{"xref_id":"0008432"}}}


id: SO:0001448
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons CAA and CAG. ","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine","synonyms":[{"name":"Gln","type":"exact"},{"name":"Q","type":"exact"}],"termid":"SO:0001448"}


id: GO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete GP40-like receptor activity (obsolete GO:0001630)","synonyms":[{"name":"GP40-like receptor activity","type":"exact"}],"termid":"GO:0001630"}


id: PBO:0075339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SORCS3 antisense RNA 1","termid":"PBO:0075339"}


id: MONDO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of angle-closure glaucoma.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary angle-closure glaucoma","termid":"MONDO:0001868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic closed-angle glaucoma","secondary_identifiers":["UMLS:C0154947","MEDGEN:509736","SCTID:33647009","DOID:14445","ICD9:365.23"],"synonyms":[{"name":"anatomical narrow angle glaucoma","type":"exact"},{"name":"angle-closure glaucoma, chronic","type":"exact"},{"name":"chronic angle-closure glaucoma","type":"exact"},{"name":"chronic narrow angle glaucoma","type":"exact"}],"termid":"MONDO:0001966","xrefs":{"Monarch":{"xref_id":"0001966"}}}


id: PBO:0089567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GEF Sec2","termid":"PBO:0089567"}


id: FYPO:0007118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to leucine starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during cellular response to leucine starvation","synonyms":[{"name":"increased RNA accumulation during cellular response to leucine starvation","type":"related"},{"name":"increased RNA level during cellular response to leucine depletion","type":"exact"},{"name":"increased RNA level during cellular response to leucine deprivation","type":"exact"},{"name":"increased RNA level during cellular response to leucine starvation during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to leucine starvation during vegetative growth","type":"exact"},{"name":"increased RNA level during leucine starvation","type":"exact"},{"name":"increased mRNA level during cellular response to leucine starvation","type":"narrow"},{"name":"increased transcript level during cellular response to leucine starvation","type":"exact"}],"termid":"FYPO:0007118"}


id: PBO:0089107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase alpha subunit","termid":"PBO:0089107"}


id: MONDO:0033682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"immuno-osseous dysplasia","termid":"MONDO:0015708"},{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"skeletal dysplasia-T-cell immunodeficiency-developmental delay syndrome","secondary_identifiers":["GARD:22070","MEDGEN:1799322","UMLS:C5567899","Orphanet:508533"],"termid":"MONDO:0033682","xrefs":{"Monarch":{"xref_id":"0033682"}}}


id: SO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory element that acts in response to a stimulus, usually via transcription factor binding.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"response_element","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:response_element","type":"exact"},{"name":"response element","type":"exact"}],"termid":"SO:0002205"}


id: MONDO:0012765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 2","secondary_identifiers":["UMLS:C4747568","MEDGEN:1648459","OMIM:611944","DOID:0070211","GARD:16453","MESH:C567452"],"synonyms":[{"name":"LMPH1B","type":"exact"},{"name":"lymphedema, hereditary, 1B","type":"exact"}],"termid":"MONDO:0012765","xrefs":{"Monarch":{"xref_id":"0012765"}}}


id: MOD:00364
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 5-hydroxy-N6,N6,N6-trimethyl-L-lysine.","definition_xrefs":["PubMed:11349130","PubMed:14661085","RESID:AA0359","Unimod:445#K"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"5-hydroxy-L-lysine","termid":"MOD:00037"},{"relation_name":"has_functional_parent","term_name":"N6,N6,N6-trimethyl-L-lysine","termid":"MOD:00083"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"5-hydroxy-N6,N6,N6-trimethyl-L-lysine","synonyms":[{"name":"(2R,5Xi)-5-amino-5-carboxy-2-hydroxy-N,N,N-trimethylpentan-1-aminium","type":"exact"},{"name":"(2Xi,5S)-5-amino-5-carboxy-2-hydroxy-N,N,N-trimethylpentanaminium","type":"exact"},{"name":"(2Xi,5S)-5-azanyl-5-carboxy-2-hydroxy-N,N,N-trimethylpentanazanium","type":"exact"},{"name":"5-hydroxy-N(zeta)-trimethyllysine","type":"exact"},{"name":"5-hydroxy-N6,N6,N6-trimethyl","type":"related"},{"name":"5-hydroxy-N6,N6,N6-trimethyl-L-lysine","type":"exact"},{"name":"5-hydroxy-N6,N6,N6-trimethyllysin-N6-ium","type":"exact"},{"name":"5-hydroxy-N6,N6,N6-trimethyllysine cation","type":"exact"},{"name":"5-hydroxylated N6,N6,N6-trimethylated L-lysine","type":"exact"},{"name":"5HyN6Me3Lys","type":"exact"},{"name":"Hydroxytrimethyl","type":"related"},{"name":"MOD_RES N6,N6,N6-trimethyl-5-hydroxylysine","type":"exact"},{"name":"alpha-amino-epsilon-dimethylamino-delta-hydroxycaproic acid","type":"exact"},{"name":"delta-hydroxy-epsilon-N,N,N-trimethyllysine","type":"exact"},{"name":"lysine derivative Lys(z)","type":"exact"}],"termid":"MOD:00364"}


id: PBO:0044316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-245 beta chain","termid":"PBO:0044316"}


id: PR:O94565
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.08c","synonyms":[{"name":"Spom972h-omh4","type":"exact"}],"termid":"PR:O94565"}


id: MOD:01674
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetaminohexosyl)-L-asparagine.","definition_xrefs":["OMSSA:182","Unimod:43#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-(N-acetylamino)hexosyl-L-asparagine","synonyms":[{"name":"(S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"HexNAcAsn","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"},{"name":"N4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(2-acetylamino-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(N-acetylhexosaminyl)asparagine","type":"exact"},{"name":"N4-asparagine-beta-N-acetylhexosaminide","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4HexNAcAsn","type":"exact"},{"name":"hexNAcN","type":"exact"}],"termid":"MOD:01674"}


id: PBO:0070037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1334, pseudogene","termid":"PBO:0070037"}


id: GO:0009159
data:
  {"annotated_genes":["SJAG_01974","SJAG_01055"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115546,116619],"is_not":false,"summary":null,"term":"GO:0009159"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a deoxyribonucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate catabolic process","termid":"GO:0009125"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleoside monophosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside monophosphate breakdown","type":"exact"},{"name":"deoxyribonucleoside monophosphate catabolism","type":"exact"},{"name":"deoxyribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009159","terms_by_termid":{"GO:0009159":null}}


id: PBO:0047157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 185 member A","termid":"PBO:0047157"}


id: GO:0007385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the abdominal segments following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, trunk","termid":"GO:0035292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, abdomen","termid":"GO:0007385"}


id: PBO:0029123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_cell_with_enlarged_nucleus_upon_entry_into_stationary_phase","termid":"PBO:0029123"}


id: PBO:0066019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 1","termid":"PBO:0066019"}


id: GO:1903714
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102288,109485],"is_not":false,"summary":null,"term":"GO:1903714"}]},"cv_name":"biological_process","definition":"The directed movement of isoleucine across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["PMID:18503766","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"isoleucine transport","termid":"GO:0015818"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"isoleucine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903714","terms_by_termid":{"GO:1903714":null}}


id: GO:0055117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle contraction.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle contraction","termid":"GO:0006942"},{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"regulates","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle contraction","termid":"GO:0055117"}


id: PBO:0083627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase of the hect-domain class; has a role in mRNA export from the nucleus and may regulate transcriptional coactivators; involved in degradation of excess histones; interacts with Dia2p and is required for Dia2p degradation; required to target Cdc6p for ubiquitin-mediated destruction during G1 phase","termid":"PBO:0083627"}


id: PATO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000478 poor value (obsolete PATO:0000478)","termid":"PATO:0000478"}


id: FYPO:0006154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more pheromone response mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Pheromone response genes are normally transcribed in response to a pheromone stimulus.","definition_xrefs":["PomBase:mah","PMID:22900017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of pheromone response gene mRNA during vegetative growth","synonyms":[{"name":"increased level of pheromone response gene RNA during vegetative growth","type":"exact"},{"name":"increased level of pheromone response gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of pheromone response gene transcripts during vegetative growth","type":"exact"},{"name":"increased pheromone response gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006154"}


id: PBO:0067609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 778, pseudogene","termid":"PBO:0067609"}


id: MONDO:0020748
data:
  {"annotated_genes":["SJAG_04277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86391],"is_not":false,"summary":null,"term":"MONDO:0020748"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sitosterolemia","termid":"MONDO:0008863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"sitosterolemia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060983","GARD:16372","OMIM:618666","MEDGEN:1684715","UMLS:C5231453"],"synonyms":[{"name":"STSL2","type":"exact"}],"termid":"MONDO:0020748","terms_by_termid":{"MONDO:0020748":null},"xrefs":{"Monarch":{"xref_id":"0020748"}}}


id: PBO:0085980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; protein-coding gene that evolved de novo via a series of point mutations in noncoding sequence; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; readthrough is increased upon depletion of Sup35p; may be involved in DNA repair pathway during stationary phase and contribute to robustness of cells when shifted to a nutrient-poor environment","termid":"PBO:0085980"}


id: PBO:0090087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease catalytic subunit Sen2","termid":"PBO:0090087"}


id: PBO:0030581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_asparagine_level","termid":"PBO:0030581"}


id: PBO:0081242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 10","termid":"PBO:0081242"}


id: MONDO:0015429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete choroideremia-hypopituitarism syndrome (obsolete MONDO:0015429)","termid":"MONDO:0015429","xrefs":{"Monarch":{"xref_id":"0015429"}}}


id: SO:0001653
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcription factor binding site of variable direct repeats of the sequence PuGGTCA spaced by five nucleotides (DR5) found in the promoters of retinoic acid-responsive genes, to which retinoic acid receptors bind.","definition_xrefs":["PMID:11327309","PMID:19917671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic_acid_responsive_element","synonyms":[{"name":"RARE","type":"exact"},{"name":"retinoic acid responsive element","type":"exact"}],"termid":"SO:0001653"}


id: GO:0036460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stress acting at the cell envelope.","definition_xrefs":["PMID:15882407","PMID:15101969","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cell envelope stress","synonyms":[{"name":"envelope stress response","type":"exact"}],"termid":"GO:0036460"}


id: PBO:0054829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2242","termid":"PBO:0054829"}


id: PBO:0079540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 1","termid":"PBO:0079540"}


id: MONDO:0008241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycoprotein 1","secondary_identifiers":["MEDGEN:401424","OMIM:172290","UMLS:C1868352"],"synonyms":[{"name":"PGP1","type":"related"},{"name":"phosphoglycoprotein 1","type":"exact"},{"name":"phosphoglycoprotein type 1","type":"exact"}],"termid":"MONDO:0008241","xrefs":{"Monarch":{"xref_id":"0008241"}}}


id: GO:0005594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type IX alpha chains in alpha1(IX)alpha2(IX)alpha3(IX) trimers; type IX collagen triple helices associate to form a structure that links glycosaminoglycans to type II collagen fibrils.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type IX trimer","termid":"GO:0005594"}


id: GO:0071262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of deprivation of nourishment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"},{"relation_name":"part_of","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation in response to starvation","synonyms":[{"name":"regulation of translational initiation in response to nutrient starvation","type":"exact"}],"termid":"GO:0071262"}


id: PBO:0086062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with translating ribosomes; interacts with GTPase Rbg1p","termid":"PBO:0086062"}


id: MONDO:0016196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of emerin (obsolete MONDO:0016196)","secondary_identifiers":["Orphanet:209188"],"termid":"MONDO:0016196","xrefs":{"Monarch":{"xref_id":"0016196"}}}


id: GO:0005869
data:
  {"annotated_genes":["SJAG_01739","SJAG_00140","SJAG_05185","SJAG_03673","SJAG_00397"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79963,94703,102449,110498,113386],"is_not":false,"summary":null,"term":"GO:0005869"}]},"cv_name":"cellular_component","definition":"A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_00397":null,"SJAG_01739":null,"SJAG_03673":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"dynactin complex","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null},"termid":"GO:0005869","terms_by_termid":{"GO:0005869":null}}


id: GO:0098915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the ventricular cardiomyocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"is_a","term_name":"ventricular cardiac muscle cell membrane repolarization","termid":"GO:0099625"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during ventricular cardiac muscle cell action potential","synonyms":[{"name":"electrocardiogram T wave","type":"related"},{"name":"regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"ventricular repolarization","type":"related"}],"termid":"GO:0098915"}


id: GO:1900259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of RNA-directed 5'-3' RNA polymerase activity.","definition_xrefs":["GOC:pf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of RNA-dependent RNA polymerase activity (obsolete GO:1900259)","synonyms":[{"name":"regulation of 3D polymerase activity","type":"exact"},{"name":"regulation of Q-beta replicase activity","type":"exact"},{"name":"regulation of RDRP","type":"related"},{"name":"regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"regulation of RNA replicase activity","type":"exact"},{"name":"regulation of RNA synthetase activity","type":"related"},{"name":"regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"regulation of RNA-directed 5'-3' RNA polymerase activity","type":"exact"},{"name":"regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"regulation of ribonucleic replicase activity","type":"exact"},{"name":"regulation of ribonucleic synthetase activity","type":"related"},{"name":"regulation of transcriptase","type":"broad"}],"termid":"GO:1900259"}


id: MONDO:0020580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term that refers to germinoma, seminoma, or dysgerminoma.","definition_xrefs":["NCIT:C121618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germinomatous germ cell tumor","secondary_identifiers":["MEDGEN:888719","UMLS:C4054897"],"synonyms":[{"name":"germinomatous germ cell tumor","type":"exact"}],"termid":"MONDO:0020580","xrefs":{"Monarch":{"xref_id":"0020580"}}}


id: PBO:0089440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific low-complexity Glycine rich protein","termid":"PBO:0089440"}


id: MONDO:0034668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete terminal transverse limb defect (obsolete MONDO:0034668)","secondary_identifiers":["Orphanet:498461"],"termid":"MONDO:0034668","xrefs":{"Monarch":{"xref_id":"0034668"}}}


id: FYPO:0007267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum (ER) colocalizes with eisosomes to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:32023460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cortical endoplasmic reticulum organization","termid":"FYPO:0007571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased colocalization of cortical endoplasmic reticulum with eisosomes","synonyms":[{"name":"increased colocalization of cortical ER with eisosomes","type":"exact"},{"name":"increased colocalization of cortical endoplasmic reticulum with eisosomes during mitotic cell cycle","type":"related"},{"name":"increased colocalization of cortical endoplasmic reticulum with eisosomes during vegetative growth","type":"exact"},{"name":"increased colocalization of tubular cortical ER with eisosomes","type":"exact"},{"name":"increased cortical ER-eisosome colocalization","type":"exact"}],"termid":"FYPO:0007267"}


id: PBO:0071130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 132","termid":"PBO:0071130"}


id: GO:0030490
data:
  {"annotated_genes":["SJAG_02821","SJAG_04033","SJAG_05187","SJAG_03654","SJAG_03028","SJAG_01764","SJAG_04908","SJAG_01272","SJAG_05018","SJAG_00772","SJAG_03156","SJAG_02547","SJAG_01551","SJAG_00572","SJAG_00294","SJAG_02662","SJAG_02911","SJAG_01907","SJAG_02020","SJAG_02681","SJAG_04582","SJAG_03569","SJAG_00986","SJAG_03755","SJAG_02644","SJAG_01420","SJAG_02250","SJAG_04339","SJAG_01250","SJAG_03846","SJAG_03796","SJAG_02025","SJAG_02608","SJAG_04979","SJAG_03410","SJAG_03539","SJAG_01347","SJAG_06613","SJAG_02300","SJAG_04890","SJAG_04524","SJAG_03422","SJAG_00344","SJAG_02499","SJAG_04174","SJAG_03857","SJAG_03954","SJAG_03425","SJAG_01623","SJAG_00955","SJAG_00945","SJAG_00879","SJAG_04900","SJAG_03341","SJAG_04687","SJAG_02749","SJAG_00965","SJAG_03952","SJAG_04029","SJAG_01609","SJAG_02358","SJAG_01604","SJAG_00562","SJAG_01877","SJAG_04746","SJAG_00897","SJAG_01323","SJAG_01618","SJAG_04916","SJAG_03077","SJAG_04424","SJAG_04224","SJAG_03234","SJAG_02553","SJAG_04069","SJAG_02702"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88206,88547,90825,91553,91787,92790,93200,94262,95228,95329,95721,96356,97367,98025,98292,99955,100084,101171,101415,104061,106832,109434,109554,110020,111446,112982,115878],"is_not":false,"summary":null,"term":"GO:0030490"},{"annotations":[107084,99313,114639],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000480"},{"annotations":[96290,112930,92916,104033,105031,94214,114751,98991,114839,118027,102609,105128,107085,108462,99314,107414,104249,95999,105127],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[105032],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000461"},{"annotations":[108463,107086,114640,99315],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000472"},{"annotations":[99701,96539,106433,98660,93834,105686,109182,95179,114167,98661,95178,88750,108163,109843,100250,106573,105152,87833,97841,97842,92143,101062,100898,105448,90740,108554,87337,111227,98698,105151,116189,115194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000462"},{"annotations":[92120],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904812"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"},{"relation_name":"part_of","term_name":"ribosomal small subunit biogenesis","termid":"GO:0042274"}],"gene_count":76,"genes_by_uniquename":{"SJAG_00294":null,"SJAG_00344":null,"SJAG_00562":null,"SJAG_00572":null,"SJAG_00772":null,"SJAG_00879":null,"SJAG_00897":null,"SJAG_00945":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_00986":null,"SJAG_01250":null,"SJAG_01272":null,"SJAG_01323":null,"SJAG_01347":null,"SJAG_01420":null,"SJAG_01551":null,"SJAG_01604":null,"SJAG_01609":null,"SJAG_01618":null,"SJAG_01623":null,"SJAG_01764":null,"SJAG_01877":null,"SJAG_01907":null,"SJAG_02020":null,"SJAG_02025":null,"SJAG_02250":null,"SJAG_02300":null,"SJAG_02358":null,"SJAG_02499":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02608":null,"SJAG_02644":null,"SJAG_02662":null,"SJAG_02681":null,"SJAG_02702":null,"SJAG_02749":null,"SJAG_02821":null,"SJAG_02911":null,"SJAG_03028":null,"SJAG_03077":null,"SJAG_03156":null,"SJAG_03234":null,"SJAG_03341":null,"SJAG_03410":null,"SJAG_03422":null,"SJAG_03425":null,"SJAG_03539":null,"SJAG_03569":null,"SJAG_03654":null,"SJAG_03755":null,"SJAG_03796":null,"SJAG_03846":null,"SJAG_03857":null,"SJAG_03952":null,"SJAG_03954":null,"SJAG_04029":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04424":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04687":null,"SJAG_04746":null,"SJAG_04890":null,"SJAG_04900":null,"SJAG_04908":null,"SJAG_04916":null,"SJAG_04979":null,"SJAG_05018":null,"SJAG_05187":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"maturation of SSU-rRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SSU-rRNA maturation","type":"exact"},{"name":"processing of 20S pre-rRNA","type":"narrow"}],"termid":"GO:0030490","terms_by_termid":{"GO:0000447":null,"GO:0000461":null,"GO:0000462":null,"GO:0000472":null,"GO:0000480":null,"GO:0030490":null,"GO:1904812":null}}


id: GO:0045100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A type of intermediate filament.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete desmin (obsolete GO:0045100)","synonyms":[{"name":"desmin","type":"exact"}],"termid":"GO:0045100"}


id: PBO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis CGR1 family (predicted)","termid":"PBO:0002225"}


id: PBO:0043297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 16A","termid":"PBO:0043297"}


id: MONDO:1040053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by an autosomal dominant variant in the PROM1 gene.","definition_xrefs":["PMID:38072963","PMID:10205271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"PROM1-related retinopathy","termid":"MONDO:1040056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"PROM1-related dominant retinopathy","synonyms":[{"name":"PROM1-related dominant retinopathy","type":"exact"}],"termid":"MONDO:1040053","xrefs":{"Monarch":{"xref_id":"1040053"}}}


id: GO:0103113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glucosyl-oleandomycin + ATP + H2O = glucosyl-oleandomycin + ADP + hydrogenphosphate + H+.","definition_xrefs":["EC:3.6.3.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete glucosyl-oleandomycin-exporting ATPase activity (obsolete GO:0103113)","termid":"GO:0103113"}


id: MONDO:0044320
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86240,86241],"is_not":false,"summary":null,"term":"MONDO:0044320"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 79","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1386200","GARD:16231","OMIM:617460","UMLS:C4479526"],"synonyms":[{"name":"RP79","type":"related"},{"name":"retinitis pigmentosa 79","type":"exact"}],"termid":"MONDO:0044320","terms_by_termid":{"MONDO:0044320":null},"xrefs":{"Monarch":{"xref_id":"0044320"}}}


id: MONDO:0009849
data:
  {"annotated_genes":["SJAG_04865","SJAG_01474"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86278,86279],"is_not":false,"summary":null,"term":"MONDO:0009849"}]},"cv_name":"mondo","definition":"Hyperimmunoglobinemia D with periodic fever (HIDS) is a rare autoinflammatory disease characterized by periodic attacks of fever and a systemic inflammatory reaction (cervical lymphadenopathy, abdominal pain, vomiting, diarrhea, arthralgias and skin signs).","definition_xrefs":["Orphanet:343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"mevalonate kinase deficiency","termid":"MONDO:0017708"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01474":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005046"],"is_obsolete":false,"name":"hyperimmunoglobulinemia D with periodic fever","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2788","NANDO:2200436","DOID:0081450","MEDGEN:140768","NANDO:1200866","OMIM:260920","UMLS:C0398691"],"synonyms":[{"name":"HIDS","type":"exact"},{"name":"hyper IgD syndrome","type":"related"},{"name":"hyper-IgD syndrome","type":"exact"},{"name":"hyperimmunoglobinemia D with recurrent fever","type":"exact"},{"name":"hyperimmunoglobulinemia D and periodic fever syndrome","type":"related"},{"name":"hyperimmunoglobulinemia D syndrome","type":"exact"},{"name":"partial mevalonate kinase deficiency","type":"exact"},{"name":"periodic fever Dutch type","type":"related"},{"name":"periodic fever, Dutch type","type":"related"}],"termid":"MONDO:0009849","terms_by_termid":{"MONDO:0009849":null},"xrefs":{"Monarch":{"xref_id":"0009849"}}}


id: PBO:0071852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 47","termid":"PBO:0071852"}


id: GO:0097630
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the omegasome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["PMID:18725538","PMID:24591649","GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of omegasome membrane (obsolete GO:0097630)","synonyms":[{"name":"intrinsic to omegasome membrane","type":"narrow"}],"termid":"GO:0097630"}


id: PBO:0045748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBP cholestenol delta-isomerase","termid":"PBO:0045748"}


id: RO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between an arterial structure and another structure, where the arterial structure acts as a conduit channeling fluid, substance or energy.","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supplies","termid":"RO:0002178"}


id: PATO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an entire organism or part of an organism.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organismal quality","termid":"PATO:0001995"}


id: PBO:0047706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMNL1 antisense RNA 1","termid":"PBO:0047706"}


id: PBO:0030394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_multiseptate_vegetative_cell","termid":"PBO:0030394"}


id: MONDO:0018914
data:
  {"annotated_genes":["SJAG_03469","SJAG_00155","SJAG_01202"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014027"},{"annotations":[85970,85971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014384"}]},"cv_name":"mondo","definition":"Hypotrichosis simplex (HS) or hereditary hypotrichosis simplex (HHS) is characterized by reduced pilosity over the scalp and body (with sparse, thin, and short hair) in the absence of other anomalies.","definition_xrefs":["Orphanet:55654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00155":null,"SJAG_01202":null,"SJAG_03469":null},"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis simplex","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:344257","MESH:C537160","UMLS:C1854310","GARD:9170","SCTID:723362004"],"synonyms":[{"name":"hereditary hypotrichosis simplex","type":"narrow"}],"termid":"MONDO:0018914","terms_by_termid":{"MONDO:0014027":null,"MONDO:0014384":null},"xrefs":{"Monarch":{"xref_id":"0018914"}}}


id: GO:0034501
data:
  {"annotated_genes":["SJAG_03540","SJAG_04126","SJAG_04259","SJAG_02336","SJAG_01297","SJAG_03327","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100825,101289,113227],"is_not":false,"summary":null,"term":"GO:0034501"},{"annotations":[103387,118102,107726,99880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the kinetochore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, centromeric region","termid":"GO:0071459"},{"relation_name":"is_a","term_name":"protein localization to condensed chromosome","termid":"GO:1903083"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03327":null,"SJAG_03540":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"condensin localization to kinetochore","type":"narrow"},{"name":"protein localisation to kinetochore","type":"exact"}],"termid":"GO:0034501","terms_by_termid":{"GO:0034501":null,"GO:0140210":null}}


id: PBO:0082215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 4 subunit of the 20S proteasome; may replace alpha 3 subunit (Pre9p) under stress conditions to create a more active proteasomal isoform; GFP-fusion protein relocates from cytosol to the mitochondrial surface upon oxidative stress","termid":"PBO:0082215"}


id: PBO:0049621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 24","termid":"PBO:0049621"}


id: PBO:0082819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NADPH oxidoreductase containing flavin mononucleotide (FMN); homologous to Oye2p with different ligand binding and catalytic properties; has potential roles in oxidative stress response and programmed cell death","termid":"PBO:0082819"}


id: PBO:0039238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"albumin","termid":"PBO:0039238"}


id: FYPO:0001377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"decreased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"decreased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"decreased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced cellular calcium level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001377"}


id: SO:0000356
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases bound to a repeating unit made of a D-ribose ring connected to a phosphate backbone.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA","termid":"SO:0000356"}


id: PBO:0060055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 2","termid":"PBO:0060055"}


id: MONDO:0005999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An empyema resulting from infection by Mycobacterium tuberculosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"empyema","termid":"MONDO:0005242"},{"relation_name":"is_a","term_name":"pleural tuberculosis","termid":"MONDO:0005922"},{"relation_name":"is_a","term_name":"pleural empyema","termid":"MONDO:0018667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous empyema","secondary_identifiers":["NCIT:C34575","SCTID:14527007","UMLS:C0014014","DOID:14305","MEDGEN:4929","MESH:D004654","EFO:0007528"],"synonyms":[{"name":"tuberculous empyema (& pleural)","type":"exact"}],"termid":"MONDO:0005999","xrefs":{"Monarch":{"xref_id":"0005999"}}}


id: GO:0003014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An organ system process carried out by any of the organs or tissues of the renal system. The renal system maintains fluid balance, and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels; in other species, the renal system may comprise related structures (e.g., nephrocytes and malpighian tubules in Drosophila).","definition_xrefs":["GOC:cjm","GOC:mtg_cardio","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system process","synonyms":[{"name":"excretory system process","type":"exact"},{"name":"kidney system process","type":"related"}],"termid":"GO:0003014"}


id: GO:0047079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyuridine + 2-oxoglutarate + O2 = 2-deoxy-D-ribono-1,4-lactone + CO2 + succinate + uracil.","definition_xrefs":["RHEA:23316","EC:1.14.11.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"deoxyuridine 1'-dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.11.10-RXN","KEGG_REACTION:R02486"],"synonyms":[{"name":"2'-deoxyuridine,2-oxoglutarate:oxygen oxidoreductase (1'-hydroxylating)","type":"related"},{"name":"pyrimidine-deoxynucleoside 1'-dioxygenase activity","type":"broad"},{"name":"pyrimidine-deoxynucleoside,2-oxoglutarate 1'-dioxygenase activity","type":"broad"}],"termid":"GO:0047079"}


id: GO:0106050
data:
  {"annotated_genes":["SJAG_01269","SJAG_01375"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90453,97352],"is_not":false,"summary":null,"term":"GO:0106050"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing a 2'-O-nucleotide.","definition_xrefs":["PMID:17242307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_01375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0140101","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"tRNA 2'-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6788684","Reactome:R-HSA-6788668","Reactome:R-HSA-9024159"],"termid":"GO:0106050","terms_by_termid":{"GO:0106050":null}}


id: PBO:0000377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic suppressor protein Ste7","termid":"PBO:0000377"}


id: MONDO:0001821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by a recurrent or persistent lack of desire for sexual activity. The lack of sexual desire is not attributable to another psychiatric disorder or to the physiological effects of substance use or a general medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychosexual disorder","termid":"MONDO:0000947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoactive sexual desire disorder","secondary_identifiers":["ICD9:302.71","NCIT:C94337","DOID:13868","UMLS:C0020594","SCTID:270903007","ICD10CM:F52.0","MEDGEN:43792"],"synonyms":[{"name":"lack or loss of sexual desire","type":"exact"}],"termid":"MONDO:0001821","xrefs":{"Monarch":{"xref_id":"0001821"}}}


id: PBO:0011066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family helicase","termid":"PBO:0011066"}


id: PBO:0084284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for ER to Golgi transport; localized to the Golgi, the ER, and COPII vesicles; interacts with Yip1p and Yif1p","termid":"PBO:0084284"}


id: PBO:0064814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 5","termid":"PBO:0064814"}


id: GO:0103056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A53 + O2 + 2-oxoglutarate = gibberellin A44 diacid + carbon dioxide + succinate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A53, 2-oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0103056)","termid":"GO:0103056"}


id: GO:0006371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which excision of introns from the primary transcript of messenger RNA (mRNA) is followed by ligation of the two exon termini exposed by removal of each intron, so that mRNA consisting only of the joined exons is produced.","definition_xrefs":["GOC:krc","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA splicing (obsolete GO:0006371)","synonyms":[{"name":"mRNA splicing","type":"exact"}],"termid":"GO:0006371"}


id: FYPO:0003637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ADP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ADP binding","termid":"FYPO:0003637"}


id: PBO:0048296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gigaxonin","termid":"PBO:0048296"}


id: GO:0004626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic phospholipase A2 activity (obsolete GO:0004626)","synonyms":[{"name":"cytosolic phospholipase A2 activity","type":"exact"}],"termid":"GO:0004626"}


id: GO:0048705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the skeleton are generated and organized.","definition_xrefs":["GOC:dsf","GOC:dph","GOC:tb","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"skeletal system development","termid":"GO:0001501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal system morphogenesis","synonyms":[{"name":"skeletal morphogenesis","type":"exact"}],"termid":"GO:0048705"}


id: PBO:0057873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3180-2","termid":"PBO:0057873"}


id: GO:0120027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of osmosensory signaling pathway.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of osmosensory signaling pathway (obsolete GO:0120027)","termid":"GO:0120027"}


id: MONDO:0045012
data:
  {"annotated_genes":["SJAG_02148","SJAG_02855","SJAG_04810","SJAG_04865","SJAG_03509","SJAG_01474","SJAG_03018","SJAG_03024","SJAG_02696","SJAG_04270","SJAG_00717"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[86774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[85096,85097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"},{"annotations":[85587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[86278,86279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[86146,86147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[84601,84602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[85318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014793"},{"annotations":[86745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of steroid metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01474":null,"SJAG_02148":null,"SJAG_02696":null,"SJAG_02855":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03509":null,"SJAG_04270":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"steroid metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0268283","SCTID:28710006","MEDGEN:541265"],"synonyms":[{"name":"disorder of steroid metabolic process","type":"exact"},{"name":"disorder of steroid metabolism","type":"exact"},{"name":"steroid metabolic process disease","type":"exact"},{"name":"steroid metabolism disease","type":"exact"}],"termid":"MONDO:0045012","terms_by_termid":{"MONDO:0008974":null,"MONDO:0009849":null,"MONDO:0010035":null,"MONDO:0010621":null,"MONDO:0011503":null,"MONDO:0011816":null,"MONDO:0012481":null,"MONDO:0013310":null,"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0045012"}}}


id: FYPO:0006362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the lncRNA borderline are present at lower levels than normal.","definition_xrefs":["PomBase:mah","PMID:26438724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased siRNA level","termid":"FYPO:0004205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased borderline-derived siRNA level","synonyms":[{"name":"decreased accumulation of borderline-derived siRNA","type":"exact"},{"name":"decreased accumulation of siRNAs homologous to borderline","type":"related"},{"name":"decreased borderline-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"decreased borderline-derived siRNA level during vegetative growth","type":"exact"},{"name":"decreased brdrRNA-derived siRNA level","type":"exact"},{"name":"decreased level of borderline-derived siRNA","type":"exact"},{"name":"decreased level of siRNAs homologous to borderline","type":"related"},{"name":"reduced borderline-derived siRNA level","type":"exact"}],"termid":"FYPO:0006362"}


id: GO:0140927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cyclic-di-GMP from one side of a membrane to the other.","definition_xrefs":["PMID:34965418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"cyclic-di-GMP transmembrane transporter activity","termid":"GO:0140927"}


id: GO:0005821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structure between the central and outer plaques of the spindle pole body.","definition_xrefs":["PMID:9215630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005575","GO:0005816","GO:0015630"],"is_obsolete":false,"name":"intermediate layer of spindle pole body","termid":"GO:0005821"}


id: PBO:0091174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BC10 family small membrane protein, unknown biological role, human BLCAP ortholog","termid":"PBO:0091174"}


id: SO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A de-branched intron which mimics the structure of pre-miRNA and enters the miRNA processing pathway without Drosha mediated cleavage.","definition_xrefs":["SO:ma","PMID:17589500"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRtron","termid":"SO:0001034"}


id: PBO:0000763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan Meu31","termid":"PBO:0000763"}


id: GO:1903034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to wounding.","definition_xrefs":["GO_REF:0000058","PMID:19164535","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to wounding","synonyms":[{"name":"regulation of physiological response to wounding","type":"exact"}],"termid":"GO:1903034"}


id: PBO:0081720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 649","termid":"PBO:0081720"}


id: PBO:0051636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner membrane mitochondrial protein pseudogene 1","termid":"PBO:0051636"}


id: GO:0098823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The amidinylation of peptidyl-cysteine to form peptidyl-S-amidino-L-cysteine.","definition_xrefs":["RESID:AA0335"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine modification to S-amindino-L-cysteine (obsolete GO:0098823)","termid":"GO:0098823"}


id: MOD:01285
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to 6x(13)C,1x(15)N isotope labeled L-leucine.","definition_xrefs":["PubMed:11857757","Unimod:695#L","PubMed:11999733","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"},{"relation_name":"is_a","term_name":"6x(13)C,1x(15)N labeled residue","termid":"MOD:01370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,1x(15)N labeled L-leucine","synonyms":[{"name":"13C(6) 15N(1) Silac label","type":"related"},{"name":"Label:13C(6)15N(1)","type":"related"}],"termid":"MOD:01285"}


id: GO:0031205
data:
  {"annotated_genes":["SJAG_00175","SJAG_02588","SJAG_02354","SJAG_03955"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109857,95238,109087,90096],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031207"}]},"cv_name":"cellular_component","definition":"An endoplasmic reticulum membrane-associated complex involved in the translocation of proteins that are targeted to the ER. In yeast, this complex consists of two subcomplexes, namely, the Sec61 complex and the Sec62/Sec63 complex.","definition_xrefs":["GOC:mtg_sensu","PMID:14617809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0032991","GO:0005575","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"endoplasmic reticulum Sec complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031205","terms_by_termid":{"GO:0031207":null}}


id: GO:0004015
data:
  {"annotated_genes":["SJAG_00673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75769],"is_not":false,"summary":null,"term":"GO:0004015"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-amino-7-oxononanoate + S-adenosyl-L-methionine(1+) = 7,8-diaminononanoate + S-adenosyl-4-methylthio-2-oxobutanoate.","definition_xrefs":["RHEA:16861","EC:2.6.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"adenosylmethionine-8-amino-7-oxononanoate transaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DAPASYN-RXN","KEGG_REACTION:R03231"],"synonyms":[{"name":"7,8-diamino-pelargonic acid aminotransferase activity","type":"related"},{"name":"7,8-diaminonanoate transaminase activity","type":"related"},{"name":"7,8-diaminononanoate aminotransferase activity","type":"related"},{"name":"7,8-diaminononanoate transaminase activity","type":"related"},{"name":"7,8-diaminopelargonic acid aminotransferase activity","type":"related"},{"name":"7-keto-8-aminopelargonic acid","type":"related"},{"name":"7-keto-8-aminopelargonic acid aminotransferase activity","type":"related"},{"name":"DAPA aminotransferase activity","type":"related"},{"name":"DAPA transaminase activity","type":"related"},{"name":"S-adenosyl-L-methionine:8-amino-7-oxononanoate aminotransferase activity","type":"related"},{"name":"adenosyl methionine-8-amino-7-oxononanoate transaminase activity","type":"exact"},{"name":"adenosylmethionine--8-amino-7-oxononanoate aminotransferase activity","type":"related"},{"name":"adenosylmethionine-8-amino-7-oxononanoate aminotransferase activity","type":"exact"},{"name":"diaminopelargonate synthase activity","type":"related"}],"termid":"GO:0004015","terms_by_termid":{"GO:0004015":null}}


id: PR:O75011
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CaM kinase-like vesicle-associated protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase nak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17F3.02","secondary_identifiers":["UniProtKB:O75011"],"synonyms":[{"name":"N-rich kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CAMKV","type":"exact"}],"termid":"PR:O75011"}


id: PBO:0071581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36","termid":"PBO:0071581"}


id: PBO:0069409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 669, pseudogene","termid":"PBO:0069409"}


id: GO:0141061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of a cell of another organism, leading to damage or temporary subversion of that cell.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of cell in another organism","termid":"GO:0141061"}


id: SO:1000044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal mutation. Rearrangements that alter the pairing of telomeres are classified as translocations.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation","termid":"SO:0000199"},{"relation_name":"is_a","term_name":"interchromosomal_mutation","termid":"SO:1000031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_translocation","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_translocation"],"synonyms":[{"name":"(Drosophila)T","type":"related"},{"name":"(fungi)T","type":"related"},{"name":"chromosomal translocation","type":"exact"}],"termid":"SO:1000044"}


id: GO:0032648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon-beta production.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type I interferon production","termid":"GO:0032479"},{"relation_name":"regulates","term_name":"interferon-beta production","termid":"GO:0032608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interferon-beta production","secondary_identifiers":["GO:0035547","GO:0045357"],"synonyms":[{"name":"regulation of IFN-beta production","type":"exact"},{"name":"regulation of interferon-beta biosynthetic process","type":"narrow"},{"name":"regulation of interferon-beta secretion","type":"narrow"}],"termid":"GO:0032648"}


id: FYPO:0004448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is observed in a particular location where it is not normally found during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"},{"relation_name":"output_of","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"mislocalized protein during meiotic cell cycle","synonyms":[{"name":"mislocalised protein during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004448"}


id: MOD:00316
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4,N4-dimethyl-L-asparagine.","definition_xrefs":["PubMed:14570711","PubMed:8783012","PubMed:12964758","RESID:AA0311","Unimod:36#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated asparagine","termid":"MOD:00673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N4,N4-dimethyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-(dimethylamino)-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4,N4-dimethylbutanediamic acid","type":"exact"},{"name":"Dimethyl","type":"related"},{"name":"MOD_RES N4,N4-dimethylasparagine","type":"exact"},{"name":"N(gamma),N(gamma)-dimethylasparagine","type":"exact"},{"name":"N4,N4-dimethyl-L-asparagine","type":"exact"},{"name":"N4,N4-dimethylated L-asparagine","type":"exact"},{"name":"N4Me2Asn","type":"exact"},{"name":"beta-dimethylasparagine","type":"related"},{"name":"di-Methylation","type":"related"}],"termid":"MOD:00316"}


id: PBO:0018225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein (predicted)","termid":"PBO:0018225"}


id: MONDO:0017309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal Marfan syndrome is a rare, severe and life-threatening genetic disease, occurring during the neonatal period, characterized by classical Marfan syndrome manifestations in addition to facial dysmorphism (megalocornea, iridodonesis, ectopia lentis, crumpled ears, loose redundant skin giving a 'senile' facial appearance), flexion joint contractures, pulmonary emphysema, and a severe, rapidly progressive cardiovascular disease (including ascending aortic dilatation and severe mitral and/or tricuspid valve insufficiency). Additionally, skeletal manifestations (arachnodactyly, dolichostenomelia, pectus deformities) are also associated.","definition_xrefs":["Orphanet:284979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"Marfan syndrome","termid":"MONDO:0007947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neonatal Marfan syndrome","secondary_identifiers":["GARD:21128","MEDGEN:864491","icd11.foundation:1102890898","SCTID:763839005","UMLS:C4016054"],"synonyms":[{"name":"neonatal MFS","type":"exact"}],"termid":"MONDO:0017309","xrefs":{"Monarch":{"xref_id":"0017309"}}}


id: PR:Q09116
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.06","synonyms":[{"name":"Spom972h-spn2","type":"exact"}],"termid":"PR:Q09116"}


id: PR:G2TRT1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor C1348.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.12","synonyms":[{"name":"Spom972h-SPBC1348.12","type":"exact"}],"termid":"PR:G2TRT1"}


id: PBO:0003489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NifU-like protein (predicted)","termid":"PBO:0003489"}


id: MONDO:0019709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cleidocranial dysplasia and isolated cranial ossification defect (obsolete MONDO:0019709)","secondary_identifiers":["Orphanet:93451"],"termid":"MONDO:0019709","xrefs":{"Monarch":{"xref_id":"0019709"}}}


id: PATO:0000806
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000806 olfactory value (obsolete PATO:0000806)","termid":"PATO:0000806"}


id: PR:O13326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met17 gene.","definition_xrefs":["UniProtKB:O13326","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetylhomoserine (thiol)-lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.11","synonyms":[{"name":"O-acetylhomoserine sulfhydrylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OAH sulfhydrylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-met17","type":"exact"},{"name":"homocysteine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13326"}


id: GO:0018075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of phenylalanine.","definition_xrefs":["RESID:AA0176","RESID:AA0175","RESID:AA0174"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine bromination (obsolete GO:0018075)","termid":"GO:0018075"}


id: PBO:0068710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 91, pseudogene","termid":"PBO:0068710"}


id: GO:0014820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within tonic smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the tonic smooth muscle, the muscle contraction occurs without an ordered sarcomeric structure. Tonic smooth muscle contraction occurs as a sustained continuous contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tonic smooth muscle contraction","termid":"GO:0014820"}


id: GO:1900532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of cell proliferation during cellular hyperosmotic response.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell proliferation involved in cellular hyperosmotic response (obsolete GO:1900532)","synonyms":[{"name":"down regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"down regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"down regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"down regulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"down-regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"downregulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"downregulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"downregulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"downregulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"inhibition of cell proliferation of cellular HOG response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular hyperosmotic response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular hypertonic response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular response to hypertonicity","type":"narrow"},{"name":"negative regulation of cell proliferation involved in cellular hyperosmotic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular response to hypertonicity","type":"exact"}],"termid":"GO:1900532"}


id: GO:0009521
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex located in a photosynthetic membrane that consists of a photoreaction center associated with accessory pigments and electron carriers. Examples of this component are found in Arabidopsis thaliana and in photosynthetic bacterial and archaeal species.","definition_xrefs":["ISBN:0140514031","PMID:9821949","GOC:mah","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"photosynthetic membrane","termid":"GO:0034357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"photosystem","secondary_identifiers":["Wikipedia:Photosystem","GO:0030090"],"synonyms":[{"name":"reaction center","type":"narrow"},{"name":"reaction centre","type":"narrow"}],"termid":"GO:0009521"}


id: PBO:0052686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 10","termid":"PBO:0052686"}


id: FYPO:0001324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during vegetative growth","synonyms":[{"name":"decreased protein accumulation during vegetative growth","type":"related"},{"name":"decreased protein level during mitotic cell cycle","type":"related"},{"name":"reduced protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0001324"}


id: GO:0021724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior raphe nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GO_REF:0000021","ZFA:0000366","GOC:cjm","GOC:dgh","GOC:cls","GOC:cvs","GOC:curators","GOC:dph","PMID:19003874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior raphe nucleus development","synonyms":[{"name":"inferior central nucleus development","type":"broad"},{"name":"posterior raphe nucleus development","type":"broad"}],"termid":"GO:0021724"}


id: MONDO:0022812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder with basis in disruption of a complement receptor.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"complement deficiency","termid":"MONDO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement receptor deficiency","secondary_identifiers":["GARD:9527","ICD9:279.8","SCTID:234628004","MEDGEN:96025","UMLS:C0398783"],"synonyms":[{"name":"complement receptor deficiency","type":"exact"}],"termid":"MONDO:0022812","xrefs":{"Monarch":{"xref_id":"0022812"}}}


id: PBO:0083472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RPL12A/YEL054C","termid":"PBO:0083472"}


id: PBO:0055121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2540","termid":"PBO:0055121"}


id: GO:1903984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:24939851","GO_REF:0000058","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902043"},{"relation_name":"is_a","term_name":"regulation of TRAIL-activated apoptotic signaling pathway","termid":"GO:1903121"},{"relation_name":"positively_regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"activation of TRAIL-activated apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-induced apoptotic signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"narrow"},{"name":"positive regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"upregulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903984"}


id: FYPO:0000878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere inner repeat during vegetative growth","termid":"FYPO:0000868"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000877"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation at centromere inner repeat during vegetative growth","termid":"FYPO:0008200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"v histone lysine H3 K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000878"}


id: PBO:0076026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STK24 antisense RNA 1","termid":"PBO:0076026"}


id: FYPO:0004614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, is abnormal.","definition_xrefs":["GO:0046785","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule polymerization during vegetative growth","synonyms":[{"name":"abnormal microtubule growth","type":"exact"},{"name":"abnormal microtubule polymerisation","type":"exact"},{"name":"abnormal microtubule polymerisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule rescue","type":"related"}],"termid":"FYPO:0004614"}


id: PBO:0068859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 99, pseudogene","termid":"PBO:0068859"}


id: PBO:0038796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 2","termid":"PBO:0038796"}


id: PBO:0071590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 7","termid":"PBO:0071590"}


id: GO:0034343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of type III interferon due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["ISBN:0126896631","PMID:16734557","GOC:add","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"type III interferon production","secondary_identifiers":["GO:0072644"],"synonyms":[{"name":"type III IFN production","type":"exact"},{"name":"type III interferon secretion","type":"narrow"}],"termid":"GO:0034343"}


id: MONDO:1010526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, dog","secondary_identifiers":["OMIA:000197-9615"],"termid":"MONDO:1010526","xrefs":{"Monarch":{"xref_id":"1010526"}}}


id: MONDO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic vascular disorder that affects the liver. Representative examples include veno-occlusive disease, hemangioma, lymphangioma, and angiosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatic vascular disorder","secondary_identifiers":["MEDGEN:140779","UMLS:C0400923","ICD9:573.8","SCTID:235878005","DOID:272","NCIT:C35442"],"synonyms":[{"name":"hepatic vascular disorder","type":"exact"},{"name":"liver vascular disorder","type":"exact"},{"name":"vascular disorder of liver","type":"exact"}],"termid":"MONDO:0002405","xrefs":{"Monarch":{"xref_id":"0002405"}}}


id: PBO:0062752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily L member 1","termid":"PBO:0062752"}


id: GO:0048881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mechanosensory lateral line system over time, from its formation to the mature structure. The mechanosensory lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head and body of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanosensory lateral line system development","synonyms":[{"name":"LL system development","type":"exact"}],"termid":"GO:0048881"}


id: MONDO:0100080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardioectodermal syndromes are those in which phenotypic manifestations occur in the heart, skin, and/or hair. Variation in the genes of interest may occur in both an autosomal dominant inheritance pattern, or in an autosomal recessive inheritance pattern which may result in an earlier and/or more severe phenotypic presentation.","definition_xrefs":["PMID:27933191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardioectodermal syndrome","synonyms":[{"name":"cardio-ectodermal syndrome","type":"exact"}],"termid":"MONDO:0100080","xrefs":{"Monarch":{"xref_id":"0100080"}}}


id: GO:0045213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving neurotransmitter receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter receptor metabolic process (obsolete GO:0045213)","synonyms":[{"name":"neurotransmitter receptor metabolism","type":"exact"}],"termid":"GO:0045213"}


id: PBO:0029209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cobalt","termid":"PBO:0029209"}


id: MONDO:0019808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital heart defect characterized by the complete failure of the aortic valve to open. It is manifested during infancy with cyanosis, dyspnea, and rapidly progressing heart failure.","definition_xrefs":["NCIT:C98818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"congenital aortic valve stenosis","termid":"MONDO:0017735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve atresia","secondary_identifiers":["icd11.foundation:1700740306","GARD:19260","MedDRA:10066801","UMLS:C0265843","HP:0010883","SCTID:51442005","MEDGEN:451016","Orphanet:95448"],"synonyms":[{"name":"aortic valve atresia","type":"exact"},{"name":"aortic valve atresia (disease)","type":"exact"},{"name":"congenital aortic valve atresia","type":"exact"},{"name":"congenital atresia of aortic valve","type":"exact"}],"termid":"MONDO:0019808","xrefs":{"Monarch":{"xref_id":"0019808"}}}


id: MONDO:0015502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pinnae and external auditory canal anomaly (obsolete MONDO:0015502)","secondary_identifiers":["Orphanet:156243"],"termid":"MONDO:0015502","xrefs":{"Monarch":{"xref_id":"0015502"}}}


id: PBO:0058118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4421","termid":"PBO:0058118"}


id: SO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS region corresponding to a propeptide of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propeptide_region_of_CDS","synonyms":[{"name":"INSDC_feature:propeptide","type":"exact"},{"name":"propeptide region of CDS","type":"exact"}],"termid":"SO:0002250"}


id: GO:0032451
data:
  {"annotated_genes":["SJAG_03664","SJAG_03286","SJAG_03041","SJAG_03635","SJAG_02401","SJAG_03750","SJAG_00892","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111678,86911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[117197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[86912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032453"},{"annotations":[86913,112505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[117198,111679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[102715,93590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[87992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"},{"annotations":[102583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a substrate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00892":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03750":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824"],"is_obsolete":false,"name":"demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032451","terms_by_termid":{"GO:0008398":null,"GO:0032453":null,"GO:0032454":null,"GO:0034647":null,"GO:0051864":null,"GO:0140680":null,"GO:0140683":null,"GO:1990984":null}}


id: FYPO:0006579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to manganese. Cells stop growing (and may die) at a concentration of manganese ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to manganese","synonyms":[{"name":"hypersensitive to manganese","type":"exact"},{"name":"sensitive to manganese during mitotic cell cycle","type":"related"},{"name":"sensitive to manganese during vegetative growth","type":"exact"},{"name":"sensitive to manganese ions","type":"exact"}],"termid":"FYPO:0006579"}


id: PBO:0075264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 17","termid":"PBO:0075264"}


id: GO:0018167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of the chromophore phycoerythrobilin to phycoerythrin via phycoerythrobilin-bis-L-cysteine.","definition_xrefs":["RESID:AA0259"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-phycoerythrobilin linkage via phycoerythrobilin-bis-L-cysteine (obsolete GO:0018167)","termid":"GO:0018167"}


id: PBO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 8","termid":"PBO:0071350"}


id: PBO:0065974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54 like","termid":"PBO:0065974"}


id: GO:0090691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that specifies plant organ primordium boundaries resulting in a restriction of organogenesis to a limited spatial domain and keeping the organ separate from surrounding tissues.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of plant organ boundary","termid":"GO:0090691"}


id: MONDO:1040047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the BBS5 gene.","definition_xrefs":["PMID:33560420","PMID:15137946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS5-related ciliopathy","synonyms":[{"name":"BBS5-related ciliopathy","type":"exact"}],"termid":"MONDO:1040047","xrefs":{"Monarch":{"xref_id":"1040047"}}}


id: PBO:0088072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease component of the SAGA acetylation complex; required for SAGA (Spt-Ada-Gcn5-Acetyltransferase)-mediated deubiquitination of histone H2B","termid":"PBO:0088072"}


id: MONDO:0012870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2q31.2 deletion syndrome","secondary_identifiers":["MESH:C567344","DOID:0060416","MEDGEN:394109","OMIM:612345","UMLS:C2676724"],"synonyms":[{"name":"chromosome 2q31.2 deletion syndrome","type":"exact"}],"termid":"MONDO:0012870","xrefs":{"Monarch":{"xref_id":"0012870"}}}


id: GO:0002768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell capable of activating, perpetuating, or inhibiting an immune response.","definition_xrefs":["ISBN:0781735149","PMID:15771571","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-regulating signaling pathway","termid":"GO:0002764"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"immune response-regulating cell surface receptor signaling pathway","synonyms":[{"name":"immune response-regulating cell surface receptor signalling pathway","type":"exact"}],"termid":"GO:0002768"}


id: PBO:0068031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 336","termid":"PBO:0068031"}


id: GO:0023003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Migration of one of the four nuclei at each pole of the eight-nucleate embryo sac, to the center of the cell.","definition_xrefs":["GOC:mtg_plant","ISBN:047186840X","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo sac nuclear migration","termid":"GO:0009562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"nuclear migration to the embryo sac center","synonyms":[{"name":"nuclear migration to the embryo sac centre","type":"exact"},{"name":"nuclear migration to the female gametophyte center","type":"exact"},{"name":"nuclear migration to the female gametophyte centre","type":"exact"},{"name":"nuclear migration to the megagametophyte center","type":"exact"},{"name":"nuclear migration to the megagametophyte centre","type":"exact"},{"name":"nucleus migration to the female gametophyte center","type":"exact"},{"name":"nucleus migration to the female gametophyte centre","type":"exact"}],"termid":"GO:0023003"}


id: MONDO:0010356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrogenic syndrome of inappropriate antidiuresis (NSIAD) is a rare genetic disorder of water balance, closely resembling the far more frequent syndrome of inappropriate antidiuretic secretion (SIAD), and characterized by euvolemic hypotonic hyponatremia due to impaired free water excretion and undetectable or low plasma arginine vasopressin (AVP) levels.","definition_xrefs":["Orphanet:93606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrogenic syndrome of inappropriate antidiuresis","secondary_identifiers":["icd11.foundation:808905140","SCTID:723440000","MEDGEN:336877","GARD:10306","MESH:C564491","DOID:0112121","OMIM:300539","UMLS:C1845202"],"synonyms":[{"name":"NSIAD","type":"exact"},{"name":"nephrogenic syndrome of inappropriate antidiuresis","type":"exact"},{"name":"nephrogenic syndrome of inappropriate antidiuresis, X-linked recessive","type":"exact"}],"termid":"MONDO:0010356","xrefs":{"Monarch":{"xref_id":"0010356"}}}


id: PBO:0070697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9","termid":"PBO:0070697"}


id: MONDO:0032845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 39","secondary_identifiers":["MEDGEN:1684778","DOID:0111926","UMLS:C5231438","GARD:18410","OMIM:618643"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 39","type":"related"},{"name":"SPGF39","type":"related"}],"termid":"MONDO:0032845","xrefs":{"Monarch":{"xref_id":"0032845"}}}


id: PBO:0017944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe accessory factor Apc13","termid":"PBO:0017944"}


id: PBO:0114473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine-34 deaminase subunit Tad3","termid":"PBO:0114473"}


id: PBO:0085379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP binding cassette (ABC) transporter; multidrug transporter and general stress response factor implicated in cellular detoxification; regulated by Pdr1p, Pdr3p and Pdr8p; promoter contains a PDR responsive element; PDR15 has a paralog, PDR5, that arose from the whole genome duplication","termid":"PBO:0085379"}


id: PBO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 9","termid":"PBO:0046848"}


id: MONDO:0027416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal cone dystrophy 2 (obsolete MONDO:0027416)","secondary_identifiers":["OMIM:601251"],"synonyms":[{"name":"Cone dystrophy progressive","type":"related"},{"name":"Progressive cone degeneration","type":"related"},{"name":"RCD2","type":"related"}],"termid":"MONDO:0027416","xrefs":{"Monarch":{"xref_id":"0027416"}}}


id: PBO:0066862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 162","termid":"PBO:0066862"}


id: PBO:0073703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI proto-oncogene","termid":"PBO:0073703"}


id: FYPO:0006637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is decreased, and an increased amount of the protein is instead detected distributed throughout the cell cortex.","definition_xrefs":["PomBase:mah","PMID:29930085"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"},{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"decreased protein localization to cell tip, with protein distributed in plasma membrane or cortex","termid":"FYPO:0003208"},{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0005798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell cortex of cell tip, with protein distributed in cortex","synonyms":[{"name":"decreased protein localisation to cell cortex of cell tip, with protein distributed in cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell end, with protein distributed in cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell tip, with protein distributed in cortex, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to of cell tip cortex, with protein distributed in cortex","type":"exact"},{"name":"reduced protein localization to cell cortex of cell tip, with protein distributed in cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0006637"}


id: PBO:0089245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S37","termid":"PBO:0089245"}


id: GO:1902140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inositol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:16496115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to inositol","termid":"GO:1902140"}


id: GO:0006844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of acyl carnitine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acyl carnitine is the condensation product of a carboxylic acid and carnitine and is the transport form for a fatty acid crossing the mitochondrial membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl carnitine transport (obsolete GO:0006844)","termid":"GO:0006844"}


id: MONDO:0017816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary systemic amyloidosis (PSA) is a form of AL amyloidosis caused by the aggregation and deposition of insoluble amyloid fibrils derived from misfolded monoclonal immunoglobulin light chains usually produced by a plasma cell tumor and characterized by multiple organ involvement.","definition_xrefs":["Orphanet:314701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AL amyloidosis","termid":"MONDO:0019438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"primary systemic amyloidosis","secondary_identifiers":["NANDO:1200209","SCTID:89449005","NCIT:C8299","MEDGEN:129028","GARD:17431","UMLS:C0281479"],"synonyms":[{"name":"systemic AL amyloidosis","type":"exact"},{"name":"systemic Immunoglobulin Light chain amyloidosis","type":"exact"},{"name":"systemic amyloidosis","type":"exact"}],"termid":"MONDO:0017816","xrefs":{"Monarch":{"xref_id":"0017816"}}}


id: PBO:0085029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyl transferase; catalyzes the cotranslational, covalent attachment of myristic acid to the N-terminal glycine residue of several proteins involved in cellular growth and signal transduction","termid":"PBO:0085029"}


id: PBO:0003921
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates mfm1","termid":"PBO:0003921"}


id: MONDO:0024285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"heavy chain disease","termid":"MONDO:0019464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"epsilon-heavy chain disease","secondary_identifiers":["UMLS:C0272254","MEDGEN:543922","ICD9:273.2","SCTID:60620005"],"synonyms":[{"name":"IgE heavy chain disease","type":"related"}],"termid":"MONDO:0024285","xrefs":{"Monarch":{"xref_id":"0024285"}}}


id: GO:0007625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism relating to grooming, cleaning and brushing to remove dirt and parasites.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"grooming behavior","synonyms":[{"name":"grooming behaviour","type":"exact"}],"termid":"GO:0007625"}


id: GO:1903783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion import across the plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:19376779","GO_REF:0000058","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transport","termid":"GO:1902306"},{"relation_name":"is_a","term_name":"regulation of sodium ion import across plasma membrane","termid":"GO:1903782"},{"relation_name":"negatively_regulates","term_name":"sodium ion import across plasma membrane","termid":"GO:0098719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sodium ion import across plasma membrane","synonyms":[{"name":"down regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"down-regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"downregulation of sodium ion import across plasma membrane","type":"exact"},{"name":"inhibition of sodium ion import across plasma membrane","type":"narrow"}],"termid":"GO:1903783"}


