# terms

id: GO:0031368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a Pro-Xaa bond by a metallopeptidase mechanism to release a C-terminal amino acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Pro-X metallocarboxypeptidase activity (obsolete GO:0031368)","synonyms":[{"name":"Pro-X metallocarboxypeptidase activity","type":"exact"}],"termid":"GO:0031368"}


id: PBO:0045368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 1","termid":"PBO:0045368"}


id: MONDO:0017508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital absence/hypoplasia of fingers excluding thumb, bilateral (obsolete MONDO:0017508)","secondary_identifiers":["Orphanet:295114"],"synonyms":[{"name":"Adactyly of hand, bilateral","type":"exact"},{"name":"digits 2-5 hypodactyly, bilateral","type":"exact"},{"name":"digits 2-5 oligodactyly, bilateral","type":"exact"}],"termid":"MONDO:0017508","xrefs":{"Monarch":{"xref_id":"0017508"}}}


id: MONDO:0957454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare form of composite dysraphism characterized by the presence of a split cord malformation and a myelomeningocele on one of the two hemicords. Hemicords can be in a single dural sac or in two separated dural sacs. Other spinal cord malformations can be associated. Due to the comparable prognosis it is considered as a subtype of myelomeningocele.","definition_xrefs":["Orphanet:645388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelomeningocele","termid":"MONDO:0019773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"hemi-myelomeningocele","secondary_identifiers":["UMLS:C5816710","MEDGEN:1843407"],"termid":"MONDO:0957454","xrefs":{"Monarch":{"xref_id":"0957454"}}}


id: GO:0017135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The interaction with synapse-associated membrane-associated protein with guanylate kinase activity.","definition_xrefs":["PMID:10207005"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane-associated protein with guanylate kinase activity interacting (obsolete GO:0017135)","synonyms":[{"name":"membrane-associated protein with guanylate kinase activity interacting","type":"exact"}],"termid":"GO:0017135"}


id: GO:0097411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by hypoxia-inducible factor (HIF1) in response to lowered oxygen levels (hypoxia). Under hypoxic conditions, the oxygen-sensitive alpha-subunit of hypoxia-inducible factor (HIF)-1 dimerizes with a HIF1-beta subunit (also called ARNT or aryl-hydrocarbon-receptor nuclear translocator), translocates to the nucleus and activates transcription of genes whose products participate in responding to hypoxia.","definition_xrefs":["GOC:jc","PMID:26579469","GOC:bf","PMID:16887934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"part_of","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hypoxia-inducible factor-1alpha signaling pathway","synonyms":[{"name":"HIF1alpha pathway","type":"exact"},{"name":"hypoxia-inducible factor signaling","type":"exact"},{"name":"hypoxia-inducible factor-1alpha signalling pathway","type":"exact"}],"termid":"GO:0097411"}


id: GO:0007517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.","definition_xrefs":["GOC:jid","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle organ development","termid":"GO:0007517"}


id: PBO:0081625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 555","termid":"PBO:0081625"}


id: FYPO:0005847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of H3-K9 specific histone methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methyltransferase activity","termid":"FYPO:0004784"},{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity (H3-K9 specific) activity","termid":"FYPO:0005846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000707","FYPO:0000661","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased histone methyltransferase activity (H3-K9 specific) activity","synonyms":[{"name":"decreased H3-K9 specific histone methyltransferase activity","type":"exact"},{"name":"reduced histone methyltransferase activity (H3-K9 specific) activity","type":"exact"}],"termid":"FYPO:0005847"}


id: PBO:0084393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; forms heteroheptameric complex (with Lsm2p, Lsm3p, Lsm4p, Lsm5p, Lsm6p, and Lsm7p) that is part of spliceosomal U6 snRNP and is also implicated in processing of pre-tRNA, pre-snoRNA, and pre-rRNA","termid":"PBO:0084393"}


id: PBO:0026931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_oscillating_nucleus","termid":"PBO:0026931"}


id: PBO:0056824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 14B","termid":"PBO:0056824"}


id: GO:0032526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to retinoic acid","synonyms":[{"name":"response to vitamin A acid","type":"exact"}],"termid":"GO:0032526"}


id: MONDO:0859327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 110","secondary_identifiers":["OMIM:620149","MEDGEN:1824038","DOID:0070395","UMLS:C5774265"],"termid":"MONDO:0859327","xrefs":{"Monarch":{"xref_id":"0859327"}}}


id: GO:0010497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of substances between cells via plasmodesmata. Plasmodesmata is a fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["PMID:17601829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular transport","termid":"GO:0010496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"plasmodesmata-mediated intercellular transport","secondary_identifiers":["GO:1902587"],"synonyms":[{"name":"plasmodesma-mediated cell-to-cell transport","type":"exact"},{"name":"plasmodesma-mediated intercellular transport","type":"exact"},{"name":"plasmodesmata-mediated cell-to-cell transport","type":"exact"},{"name":"single organism plasmodesmata-mediated intercellular transport","type":"related"},{"name":"single-organism plasmodesmata-mediated intercellular transport","type":"related"}],"termid":"GO:0010497"}


id: PBO:0028733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynine_level_during_vegetative_growth","termid":"PBO:0028733"}


id: PBO:0038771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 10","termid":"PBO:0038771"}


id: PR:P87231
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A crossover junction endonuclease MUS81 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04324","PANTHER:PTHR13451:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crossover junction endonuclease mus81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.05c","secondary_identifiers":["UniProtKB:P87231"],"synonyms":[{"name":"Spom972h-MUS81","type":"exact"}],"termid":"PR:P87231"}


id: MONDO:0011586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 2","secondary_identifiers":["DOID:0060921","MESH:C565302","OMIM:605727","MEDGEN:340117","UMLS:C1854022"],"synonyms":[{"name":"OTSC2","type":"exact"},{"name":"otosclerosis 2","type":"exact"}],"termid":"MONDO:0011586","xrefs":{"Monarch":{"xref_id":"0011586"}}}


id: GO:0000384
data:
  {"annotated_genes":["SJAG_01152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104333],"is_not":false,"summary":null,"term":"GO:0000384"}]},"cv_name":"molecular_function","definition":"Catalysis of the first transesterification reaction of spliceosomal mRNA splicing. The intron branch site adenosine is the nucleophile attacking the 5' splice site, resulting in cleavage at this position. In cis splicing, this is the step that forms a lariat structure of the intron RNA, while it is still joined to the 3' exon.","definition_xrefs":["ISBN:0879695897","GOC:krc","PMID:19239890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"first spliceosomal transesterification activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lariat formation, 5'-splice site cleavage","type":"related"}],"termid":"GO:0000384","terms_by_termid":{"GO:0000384":null}}


id: GO:0071318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ATP","termid":"GO:0033198"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ATP","synonyms":[{"name":"cellular response to adenosine 5'-triphosphate","type":"exact"},{"name":"cellular response to adenosine triphosphate","type":"exact"}],"termid":"GO:0071318"}


id: GO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0000489"}


id: MONDO:1010126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atopic dermatitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atopic dermatitis, non-human animal","secondary_identifiers":["OMIA:000269"],"termid":"MONDO:1010126","xrefs":{"Monarch":{"xref_id":"1010126"}}}


id: PBO:0083229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps YBR223C; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083229"}


id: GO:1902374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of rRNA catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:20160119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"rRNA catabolic process","termid":"GO:0016075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of rRNA catabolic process","synonyms":[{"name":"regulation of rRNA breakdown","type":"exact"},{"name":"regulation of rRNA catabolism","type":"exact"},{"name":"regulation of rRNA degradation","type":"exact"}],"termid":"GO:1902374"}


id: PBO:0042301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD8B family member 2","termid":"PBO:0042301"}


id: PBO:0077993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing 2A","termid":"PBO:0077993"}


id: MONDO:0017639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"},{"relation_name":"is_a","term_name":"carbon monoxide poisoning","termid":"MONDO:0800373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon monoxide-induced parkinsonism","secondary_identifiers":["Orphanet:306686","SCTID:230293003","MEDGEN:581450","UMLS:C0393565","GARD:21265"],"synonyms":[{"name":"CO-induced parkinsonism","type":"exact"}],"termid":"MONDO:0017639","xrefs":{"Monarch":{"xref_id":"0017639"}}}


id: PATO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's not increasing over time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-progressive","termid":"PATO:0002026"}


id: GO:0052328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the symbiont organism mediated by a substance secreted by the other organism by a type III secretion system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with symbiont via protein secreted by type III secretion system (obsolete GO:0052328)","synonyms":[{"name":"interaction with symbiont via protein secreted by type III secretion system","type":"exact"}],"termid":"GO:0052328"}


id: MOD:01816
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 2'-hydroxy-L-tryptophan.","definition_xrefs":["RESID:AA0542","PubMed:11714714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated tryptophan","termid":"MOD:01622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-hydroxy-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(2-hydroxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2'-hydroxy-L-tryptophan","type":"exact"},{"name":"2-azanyl-3-(2-hydroxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2-hydroxy-L-tryptophan","type":"exact"},{"name":"2-hydroxy-tryptophan","type":"exact"}],"termid":"MOD:01816"}


id: GO:0060544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed necrotic cell death","termid":"GO:0062098"},{"relation_name":"regulates","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of necroptotic process","secondary_identifiers":["Reactome:R-HSA-5675482"],"synonyms":[{"name":"regulation of necroptosis","type":"narrow"}],"termid":"GO:0060544"}


id: MOD:01534
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01534"}


id: PBO:0088411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafunctional aromatic polypeptide Aro1","termid":"PBO:0088411"}


id: PATO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001116 relative impulse value (obsolete PATO:0001116)","termid":"PATO:0001116"}


id: MONDO:0005812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute viral infection of the respiratory tract, occurring in isolated cases, in epidemics, or in pandemics; it is caused by serologically different strains of viruses (influenzaviruses) designated A, B, and C, has a 3-day incubation period, and usually lasts for 3 to 10 days. It is marked by inflammation of the nasal mucosa, pharynx, and conjunctiva; headache; myalgia; often fever, chills, and prostration; and occasionally involvement of the myocardium or central nervous system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral respiratory tract infection","termid":"MONDO:0024352"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"influenza","secondary_identifiers":["ICD9:487.8","icd11.foundation:145723401","MESH:D009976","SCTID:61700007","MESH:D007251","DOID:8469","UMLS:C0021400","MEDGEN:9466","EFO:0007328","NCIT:C53482","ICD9:487"],"synonyms":[{"name":"Influenza with other manifestations","type":"exact"},{"name":"flu","type":"exact"},{"name":"influenza infection","type":"exact"},{"name":"influenza with non-respiratory manifestation","type":"exact"},{"name":"orthomyxoviridae caused disease or disorder","type":"exact"},{"name":"orthomyxoviridae disease or disorder","type":"exact"},{"name":"orthomyxoviridae infectious disease","type":"exact"}],"termid":"MONDO:0005812","xrefs":{"Monarch":{"xref_id":"0005812"}}}


id: MONDO:0018145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"congenital retinal arteriovenous communication","secondary_identifiers":["UMLS:C0521570","GARD:21530","MEDGEN:105478","Orphanet:353334"],"synonyms":[{"name":"congenital arteriovenous anastomoses of the retina","type":"exact"},{"name":"congenital arteriovenous communication of the retina","type":"exact"},{"name":"congenital retinal arteriovenous anastomoses","type":"exact"}],"termid":"MONDO:0018145","xrefs":{"Monarch":{"xref_id":"0018145"}}}


id: GO:0031377
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity, located in the mitochondrion.","definition_xrefs":["ISBN:0716720094","ISBN:0471331309","PMID:12957385","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial type II fatty acid synthase complex (obsolete GO:0031377)","synonyms":[{"name":"mitochondrial type II FAS complex","type":"exact"},{"name":"mitochondrial type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031377"}


id: PBO:0083051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol acyltransferase; catalyzes the terminal step of triacylglycerol (TAG) formation, acylates diacylglycerol using acyl-CoA as an acyl donor; Lro1p and Dga1p can O-acylate ceramides; localized to lipid particles","termid":"PBO:0083051"}


id: PBO:0090839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER packaging chaperone for amino acid permeases Psh3","termid":"PBO:0090839"}


id: MONDO:0004799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ulcerative blepharitis","secondary_identifiers":["UMLS:C0155173","ICD9:373.01","MEDGEN:509828","SCTID:91662004","DOID:9483"],"termid":"MONDO:0004799","xrefs":{"Monarch":{"xref_id":"0004799"}}}


id: FYPO:0006039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic metaphase chromosome recapture does not proceed until the kinetochore has moved all the way to the spindle pole body (SPB), but kinetochores instead pause abnormally near the SPB.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0000641","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"incomplete mitotic metaphase chromosome recapture","synonyms":[{"name":"incomplete chromosome recapture during mitosis","type":"exact"},{"name":"incomplete chromosome recapture during mitotic metaphase","type":"exact"},{"name":"incomplete kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"incomplete metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"incomplete mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"incomplete mitotic metaphase kinetochore retrieval","type":"exact"},{"name":"incomplete sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0006039"}


id: PBO:0034558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2B-K119_ubiquitination","termid":"PBO:0034558"}


id: GO:0051673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of the cell membrane of another organism, leading to damage or temporary subversion of the membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of cellular anatomical structure in another organism","termid":"GO:0140975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of plasma membrane integrity in another organism","secondary_identifiers":["GO:0044662"],"synonyms":[{"name":"cytolysis, by membrane disruption, in other organism","type":"narrow"},{"name":"disruption by organism of host cell membrane","type":"exact"},{"name":"disruption by virus of host cell membrane","type":"narrow"},{"name":"disruption of membrane integrity in another organism","type":"exact"},{"name":"membrane disruption in another organism","type":"narrow"},{"name":"membrane disruption in other organism","type":"exact"},{"name":"perturbation of plasma membrane integrity in another organism","type":"exact"}],"termid":"GO:0051673"}


id: MONDO:0009748
data:
  {"annotated_genes":["SJAG_03320"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85181],"is_not":false,"summary":null,"term":"MONDO:0009748"}]},"cv_name":"mondo","definition":"This syndrome is characterized by the association of an axonal sensory and autonomic neuropathy with spastic paraplegia.","definition_xrefs":["Orphanet:139578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy with spastic paraplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:256840","icd11.foundation:813709854","SCTID:717827000","UMLS:C1850395","MEDGEN:342492","MESH:C564948","GARD:16959"],"synonyms":[{"name":"HSAN with spastic paraplegia","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy with spastic paraplegia","type":"exact"},{"name":"neuropathy, hereditary sensory, with spastic paraplegia, autosomal recessive","type":"related"}],"termid":"MONDO:0009748","terms_by_termid":{"MONDO:0009748":null},"xrefs":{"Monarch":{"xref_id":"0009748"}}}


id: FYPO:0007865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the mitotic or meiotic spindle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to spindle","synonyms":[{"name":"normal protein localisation to spindle","type":"exact"}],"termid":"FYPO:0007865"}


id: PBO:0055111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2530","termid":"PBO:0055111"}


id: PR:O42912
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tad1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.06","synonyms":[{"name":"Spom972h-tad1","type":"exact"},{"name":"tRNA-specific adenosine-37 deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42912"}


id: PBO:0002445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7SL signal recognition particle component","termid":"PBO:0002445"}


id: PBO:0039417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angel homolog 2","termid":"PBO:0039417"}


id: PBO:0051862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 2 pseudogene 1","termid":"PBO:0051862"}


id: PBO:0086441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative lipase","termid":"PBO:0086441"}


id: GO:0052211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with a second organism mediated by a substance secreted by the first organism by a type II secretion system, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with other organism via protein secreted by type II secretion system involved in symbiotic interaction (obsolete GO:0052211)","synonyms":[{"name":"interaction with other organism via protein secreted by type II secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052211"}


id: PBO:0034592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATPase_activator_activity","termid":"PBO:0034592"}


id: PBO:0078924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 1-3","termid":"PBO:0078924"}


id: GO:1901253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intracellular transport of viral material.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport of viral material","termid":"GO:1901252"},{"relation_name":"is_a","term_name":"negative regulation of viral life cycle","termid":"GO:1903901"},{"relation_name":"negatively_regulates","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular transport of viral material","synonyms":[{"name":"down regulation of egress of virus within host cell","type":"exact"},{"name":"down regulation of movement of virus within host cell","type":"exact"},{"name":"down regulation of viral egress","type":"exact"},{"name":"down-regulation of egress of virus within host cell","type":"exact"},{"name":"down-regulation of movement of virus within host cell","type":"exact"},{"name":"down-regulation of viral egress","type":"exact"},{"name":"downregulation of egress of virus within host cell","type":"exact"},{"name":"downregulation of movement of virus within host cell","type":"exact"},{"name":"downregulation of viral egress","type":"exact"},{"name":"inhibition of egress of virus within host cell","type":"narrow"},{"name":"inhibition of movement of virus within host cell","type":"exact"},{"name":"inhibition of viral egress","type":"exact"},{"name":"negative regulation of egress of virus within host cell","type":"related"},{"name":"negative regulation of movement of virus within host cell","type":"exact"},{"name":"negative regulation of viral egress","type":"exact"}],"termid":"GO:1901253"}


id: GO:0015333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: peptide(out) + H+(out) = peptide(in) + H+(in), up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by hydrogen ion movement.","definition_xrefs":["TC:2.A.17.-.-","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"peptide transmembrane transporter activity","termid":"GO:1904680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"peptide:proton symporter activity","secondary_identifiers":["Reactome:R-HSA-427998","Reactome:R-HSA-428007"],"synonyms":[{"name":"peptide:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015333"}


id: GO:1903468
data:
  {"annotated_genes":["SJAG_02074","SJAG_03160","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102807,111487,116718],"is_not":false,"summary":null,"term":"GO:1903468"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA replication initiation involved in mitotic DNA replication.","definition_xrefs":["GOC:TermGenie","PMID:1234","GOC:mtg_cell_cycle","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication initiation","termid":"GO:0032298"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle DNA replication","termid":"GO:1903465"},{"relation_name":"is_a","term_name":"regulation of mitotic DNA replication initiation","termid":"GO:1903466"},{"relation_name":"positively_regulates","term_name":"mitotic DNA replication initiation","termid":"GO:1902975"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02074":null,"SJAG_03160":null,"SJAG_03695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"positive regulation of DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA replication initiation involved in mitotic DNA replication","type":"narrow"},{"name":"activation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"narrow"},{"name":"positive regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"up regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"up regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"up-regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"up-regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"upregulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"upregulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1903468","terms_by_termid":{"GO:1903468":null}}


id: PBO:0063726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 1","termid":"PBO:0063726"}


id: FYPO:0007718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which SMN complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal SMN complex assembly","synonyms":[{"name":"abnormal SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal SMN complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007718"}


id: GO:0001197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mating-type specific process that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mating-type specific transcription from RNA polymerase II promoter (obsolete GO:0001197)","synonyms":[{"name":"activation of transcription from an RNA polymerase II promoter, mating-type specific","type":"narrow"},{"name":"stimulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"narrow"},{"name":"up regulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"},{"name":"up-regulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"},{"name":"upregulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"}],"termid":"GO:0001197"}


id: GO:0003328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a pancreatic D cell fate and its capacity to differentiate into a pancreatic D cell. A delta cell is a cell of the pancreas that produces somatostatin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"pancreatic D cell differentiation","termid":"GO:0003311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic D cell fate commitment","termid":"GO:0003328"}


id: PBO:0059422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome recycling factor pseudogene 1","termid":"PBO:0059422"}


id: FYPO:0000577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of gene silencing is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"abnormal gene silencing","termid":"FYPO:0000574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased gene silencing","synonyms":[{"name":"increased gene silencing during mitotic cell cycle","type":"related"},{"name":"increased gene silencing during vegetative growth","type":"exact"},{"name":"silencing: increased","type":"related"}],"termid":"FYPO:0000577"}


id: GO:0019455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cystine reductase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process via cystine","termid":"GO:0019453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine, using cystine reductase","synonyms":[{"name":"L-cysteine breakdown via cystine, using cystine reductase","type":"exact"},{"name":"L-cysteine degradation via cystine, using cystine reductase","type":"exact"}],"termid":"GO:0019455"}


id: GO:0009880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the patterns of cell differentiation that will arise in an embryo.","definition_xrefs":["ISBN:0521436125","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic pattern specification","synonyms":[{"name":"embryonic pattern biosynthesis","type":"broad"},{"name":"embryonic pattern formation","type":"broad"},{"name":"ventral/lateral system","type":"related"}],"termid":"GO:0009880"}


id: PBO:0057137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 218-2","termid":"PBO:0057137"}


id: PBO:0072353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 39","termid":"PBO:0072353"}


id: FYPO:0005740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to heat. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000294","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal transcription during cellular response to heat","synonyms":[{"name":"normal global transcription during vegetative growth in response to heat stress","type":"exact"},{"name":"normal transcription during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to heat during vegetative growth","type":"exact"},{"name":"normal transcription during cellular response to heat stress","type":"exact"}],"termid":"FYPO:0005740"}


id: GO:1903436
data:
  {"annotated_genes":["SJAG_03342","SJAG_01188","SJAG_04666","SJAG_03048","SJAG_02592","SJAG_03309","SJAG_04776","SJAG_00256","SJAG_03581","SJAG_03631","SJAG_00514","SJAG_00082","SJAG_01805","SJAG_04468","SJAG_03936","SJAG_05290","SJAG_02380","SJAG_04597","SJAG_02392","SJAG_03704","SJAG_01114","SJAG_01787","SJAG_02838","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[103184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[101861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[89508,93917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[93918,109975,112803,94086,87052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[90282,118986,95359,110217,103189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[106513,105852,91927,104650,88753,93305,117331,89380,112804,114914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[87053,93921,91928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[93883,118919,93311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[87366,100877,110828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"},{"annotations":[117333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinetic process","termid":"GO:0032954"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis","termid":"GO:1902412"},{"relation_name":"regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:1903436","terms_by_termid":{"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


id: MONDO:0001333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Patau syndrome (obsolete MONDO:0001333)","termid":"MONDO:0001333","xrefs":{"Monarch":{"xref_id":"0001333"}}}


id: GO:1904818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a visceral peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:15840053","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"peritoneum development","termid":"GO:1904820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visceral peritoneum development","termid":"GO:1904818"}


id: PBO:0069666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 943, pseudogene","termid":"PBO:0069666"}


id: MONDO:0005764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm composed of spindle to ovoid cells which have morphologic and immunophenotypic characteristics of follicular dendritic cells. It affects lymph nodes and other sites including the tonsils, gastrointestinal tract, spleen, liver, soft tissues, skin, and oral cavity. It usually behaves as a low grade sarcoma. Treatment options include complete surgical removal of the tumor with or without adjuvant chemotherapy or radiotherapy. Recurrences have been reported in up to half of the cases.","definition_xrefs":["NCIT:C9281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated mesenchymal tumor","termid":"MONDO:0017345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"follicular dendritic cell sarcoma","secondary_identifiers":["ICDO:9758/3","MEDGEN:220355","NANDO:2200034","ONCOTREE:FDCS","Orphanet:86902","DOID:6262","ICDO:9758/1","MESH:D054740","UMLS:C1260325","EFO:0007276","icd11.foundation:149373156","icd11.foundation:15445528","GARD:19081"],"synonyms":[{"name":"follicular Dendritic cell sarcoma","type":"exact"},{"name":"follicular Dendritic cell sarcoma/tumor","type":"exact"},{"name":"follicular dendritic cell sarcoma","type":"exact"},{"name":"follicular dendritic cell tumor","type":"exact"},{"name":"follicular dendritic cell tumour","type":"exact"},{"name":"sarcoma of follicular dendritic cell","type":"exact"}],"termid":"MONDO:0005764","xrefs":{"Monarch":{"xref_id":"0005764"}}}


id: GO:0044825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the covalent insertion of processed 3'-viral DNA ends into host chromosomal DNA by a trans-esterification reaction.","definition_xrefs":["PMID:22580823"],"gene_count":0,"genotype_count":0,"name":"obsolete retroviral strand transfer activity (obsolete GO:0044825)","synonyms":[{"name":"strand transfer reaction","type":"exact"}],"termid":"GO:0044825"}


id: PBO:0016564
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Barrats oesophagus","termid":"PBO:0016564"}


id: PR:O74113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDC45-related protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01953","PANTHER:PTHR10507:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 45 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.02","secondary_identifiers":["UniProtKB:O74113"],"synonyms":[{"name":"Spom972h-CDC45","type":"exact"},{"name":"suppressor of nda4 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74113"}


id: MOD:00713
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to a methylated glutamic acid, such as L-glutamate 5-methyl ester.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated glutamic acid","synonyms":[{"name":"MeGlu","type":"exact"}],"termid":"MOD:00713"}


id: PBO:0076859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 9","termid":"PBO:0076859"}


id: PBO:0068248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 5","termid":"PBO:0068248"}


id: PR:O74492
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5-hydroxyisourate hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxyisourate hydrolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.04","secondary_identifiers":["UniProtKB:O74492"],"synonyms":[{"name":"HIU hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HIUHase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-Urah","type":"exact"},{"name":"transthyretin-like protein C285.04 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74492"}


id: MONDO:0007584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exostoses-anetodermia-brachydactyly type E syndrome is an association reported in a single kindred characterized by the variable presence of the following features: anetodermia (macular atrophy of the skin), multiple exostoses, and brachydactyly type E. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:1962"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostoses-anetodermia-brachydactyly type E syndrome","secondary_identifiers":["GARD:2202","MEDGEN:338695","MESH:C565034","OMIM:133690","UMLS:C1851428"],"synonyms":[{"name":"exostoses with anetodermia and brachydactyly, type E","type":"related"}],"termid":"MONDO:0007584","xrefs":{"Monarch":{"xref_id":"0007584"}}}


id: MOD:00942
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes four (1)H protium atoms with four (2)H deuterium atoms to produce (4,4,5,5-(2)H4)-L-lysine.","definition_xrefs":["OMSSA:180","Unimod:481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium tetrasubstituted residue","termid":"MOD:00837"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(4,4,5,5-(2)H4)-L-lysine","synonyms":[{"name":"4,4,5,5-D4 Lysine","type":"related"},{"name":"4,4,5,5-tetradeuterolysine","type":"exact"},{"name":"Label:2H(4)","type":"related"},{"name":"lys-2H4","type":"exact"}],"termid":"MOD:00942"}


id: PR:O13814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm10 gene.","definition_xrefs":["UniProtKB:O13814","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.17c","synonyms":[{"name":"Spom972h-mdm10","type":"exact"},{"name":"mitochondrial inheritance component mdm10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13814"}


id: PBO:0070872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 3","termid":"PBO:0070872"}


id: GO:0046961
data:
  {"annotated_genes":["SJAG_05294","SJAG_04015","SJAG_01913","SJAG_01447","SJAG_00212","SJAG_04955","SJAG_01397","SJAG_02782","SJAG_03406","SJAG_00136","SJAG_01817","SJAG_02023","SJAG_01471","SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87554,89360,89676,91562,95158,96120,98421,99439,99509,101130,102162,103396,109334,118165],"is_not":false,"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["RHEA:57721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"proton-transporting ATPase activity, rotational mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP phosphohydrolase (H+-transporting) activity","type":"narrow"},{"name":"ATP synthase activity","type":"narrow"},{"name":"F(0)F(1)-ATPase activity","type":"narrow"},{"name":"F(1)-ATPase activity","type":"narrow"},{"name":"F(o)F(1)-ATPase activity","type":"narrow"},{"name":"F0F1-ATPase","type":"narrow"},{"name":"F1-ATPase","type":"narrow"},{"name":"FoF1-ATPase","type":"narrow"},{"name":"H+-transporting ATP synthase activity","type":"narrow"},{"name":"H+-transporting ATPase activity","type":"narrow"},{"name":"chloroplast ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating A-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating V-type ATPase activity","type":"narrow"},{"name":"hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"mitochondrial ATPase activity","type":"narrow"}],"termid":"GO:0046961","terms_by_termid":{"GO:0046961":null}}


id: GO:0003406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the retinal pigment epithelium over time, from its initial formation to the mature structure. The retinal pigment epithelium is the melanin-containing layer of cells between the retina and the choroid that absorbs scattered and reflected light and removes waste products produced by the photoreceptor cells.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal pigment epithelium development","synonyms":[{"name":"RPE development","type":"related"}],"termid":"GO:0003406"}


id: GO:0046714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to borate, the anion (BO3)3-.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"borate binding","synonyms":[{"name":"boron binding","type":"related"}],"termid":"GO:0046714"}


id: PATO:0000371
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000371 distance value (obsolete PATO:0000371)","termid":"PATO:0000371"}


id: PBO:0036144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_export_from_nucleus_during_glucose_starvation","termid":"PBO:0036144"}


id: MONDO:0013507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 3","secondary_identifiers":["UMLS:C3151409","DOID:0070194","GARD:15736","MEDGEN:462759","NANDO:2201283","OMIM:613960"],"synonyms":[{"name":"CDG3","type":"related"},{"name":"CGD, autosomal recessive cytochrome B-positive, type 3","type":"related"},{"name":"chronic granulomatous disease 3, autosomal recessive","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-POSITIVE, type III","type":"related"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 3","type":"exact"},{"name":"granulomatous disease, chronic, due to Ncf4 deficiency","type":"related"}],"termid":"MONDO:0013507","xrefs":{"Monarch":{"xref_id":"0013507"}}}


id: GO:0033356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-L-arabinose, uridinediphosphoarabinose, a substance composed of arabinose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UDP-L-arabinose metabolic process","synonyms":[{"name":"UDP-L-arabinose metabolism","type":"exact"}],"termid":"GO:0033356"}


id: MONDO:0014158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the ANKS6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis 16","secondary_identifiers":["UMLS:C3809320","DOID:0111124","GARD:18183","MEDGEN:815650","SCTID:444558002","OMIM:615382"],"synonyms":[{"name":"ANKS6 nephronophthisis (disease)","type":"exact"},{"name":"NPHP16","type":"exact"},{"name":"autosomal recessive infantile NPHP","type":"related"},{"name":"autosomal recessive infantile nephronophthisis","type":"related"},{"name":"infantile nephronophthisis","type":"related"},{"name":"nephronophthisis (disease) caused by mutation in ANKS6","type":"exact"},{"name":"nephronophthisis 16","type":"exact"},{"name":"nephronophthisis type 16","type":"exact"}],"termid":"MONDO:0014158","xrefs":{"Monarch":{"xref_id":"0014158"}}}


id: MOD:00427
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a methyl group.","definition_xrefs":["DeltaMass:36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated residue","termid":"MOD:00001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated residue","synonyms":[{"name":"MeRes","type":"exact"},{"name":"Methylation (N terminus, N epsilon of Lysine, O of Serine, Threonine or C terminus, N of Asparagine)","type":"exact"}],"termid":"MOD:00427"}


id: PBO:0069777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1061, pseudogene","termid":"PBO:0069777"}


id: PBO:0049525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z variant histone 1","termid":"PBO:0049525"}


id: PBO:0005038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty related protein Fft2 (predicted)","termid":"PBO:0005038"}


id: PBO:0005888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Aspartic acid, mitochondrial","termid":"PBO:0005888"}


id: GO:1901661
data:
  {"annotated_genes":["SJAG_01043","SJAG_04642","SJAG_00459","SJAG_01866","SJAG_04568","SJAG_00933","SJAG_01668","SJAG_04000","SJAG_01672","SJAG_01820","SJAG_00721","SJAG_01865","SJAG_04223","SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88703],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[87224,107629,114313,113188,119012,115305,91333,97893,91338,102723,108738,119013,89146,116538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006744"},{"annotations":[107630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032194"},{"annotations":[114659,119011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006743"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving quinone.","definition_xrefs":["GOC:pr","GOC:go_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_04000":null,"SJAG_04223":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quinone metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:29191091":null},"secondary_identifiers":["GO:0042375"],"synonyms":[{"name":"quinone cofactor metabolic process","type":"related"},{"name":"quinone cofactor metabolism","type":"related"},{"name":"quinone metabolism","type":"exact"}],"termid":"GO:1901661","terms_by_termid":{"GO:0006743":null,"GO:0006744":null,"GO:0032194":null,"GO:1904775":null}}


id: PBO:0031848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_morphology","termid":"PBO:0031848"}


id: PBO:0052724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 16","termid":"PBO:0052724"}


id: PBO:0052905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-2","termid":"PBO:0052905"}


id: FYPO:0005799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule plus ends remain in contact with the cell cortex at cell tips for a shorter time than normal.","definition_xrefs":["PMID:11007487","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased microtubule dwell time at cell tip","synonyms":[{"name":"decreased microtubule dwell time at cell end","type":"exact"},{"name":"decreased microtubule dwell time at cell tip during mitotic cell cycle","type":"related"},{"name":"decreased microtubule dwell time at cell tip during vegetative growth","type":"exact"},{"name":"decreased microtubule plus end dwell time at cell tip","type":"exact"},{"name":"reduced microtubule dwell time at cell tip","type":"exact"}],"termid":"FYPO:0005799"}


id: GO:0018635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4R)-limonene + NAD(P)H + H+ + O2 = NAD(P)+ + H2O + (4R)-limonene-1,2-epoxide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete (R)-limonene 1,2-monooxygenase activity (obsolete GO:0018635)","termid":"GO:0018635"}


id: PBO:0049848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme binding protein 1","termid":"PBO:0049848"}


id: GO:0050302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + indole-3-acetaldehyde + O2 = (indol-3-yl)acetate + H+ + H2O2.","definition_xrefs":["RHEA:16277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl-aldehyde oxidase activity","termid":"GO:0018488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetaldehyde oxidase activity","secondary_identifiers":["MetaCyc:INDOLE-3-ACETALDEHYDE-OXIDASE-RXN","EC:1.2.3.7","KEGG_REACTION:R02681"],"synonyms":[{"name":"(indol-3-yl)acetaldehyde:oxygen oxidoreductase activity","type":"related"},{"name":"AO1","type":"related"},{"name":"IAA oxidase activity","type":"related"},{"name":"IAAld oxidase activity","type":"related"},{"name":"indole-3-acetaldehyde:oxygen oxidoreductase activity","type":"related"},{"name":"indoleacetaldehyde oxidase activity","type":"related"}],"termid":"GO:0050302"}


id: MONDO:0042603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sanderson-Fraser syndrome","secondary_identifiers":["MEDGEN:419081","MESH:C537232","UMLS:C2931450"],"synonyms":[{"name":"Sanderson Fraser syndrome","type":"related"},{"name":"proptosis, Robin association, clenched hands, and multiple abnormalities","type":"related"}],"termid":"MONDO:0042603","xrefs":{"Monarch":{"xref_id":"0042603"}}}


id: MONDO:0006349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, malignant, or borderline neoplasm characterized by the presence of papillary mucinous, serous, or clear cell structures and cystic structures.","definition_xrefs":["NCIT:C4179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic neoplasm","termid":"MONDO:0021077"},{"relation_name":"is_a","term_name":"papillary epithelial neoplasm","termid":"MONDO:0021096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary cystic neoplasm","secondary_identifiers":["UMLS:C0334357","MEDGEN:137749","EFO:1000448"],"synonyms":[{"name":"papillary cystic neoplasm","type":"exact"},{"name":"papillary cystic tumor","type":"exact"},{"name":"papillary cystic tumour","type":"exact"}],"termid":"MONDO:0006349","xrefs":{"Monarch":{"xref_id":"0006349"}}}


id: PBO:0064049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 83","termid":"PBO:0064049"}


id: MONDO:0957266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RECON progeroid syndrome","secondary_identifiers":["UMLS:C5830504","MEDGEN:1841140","OMIM:620370"],"termid":"MONDO:0957266","xrefs":{"Monarch":{"xref_id":"0957266"}}}


id: MONDO:0011221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weyers ulnar ray/oligodactyly syndrome","secondary_identifiers":["OMIM:602418","MESH:C536696","UMLS:C1865566","MEDGEN:356030"],"synonyms":[{"name":"Weyers ulnar ray/oligodactyly syndrome","type":"exact"}],"termid":"MONDO:0011221","xrefs":{"Monarch":{"xref_id":"0011221"}}}


id: GO:0072095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of branch elongation involved in ureteric bud branching, the growth of a branch of the ureteric bud along its axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"branch elongation involved in ureteric bud branching","termid":"GO:0060681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branch elongation involved in ureteric bud branching","termid":"GO:0072095"}


id: GO:0061120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-1. DIF-1 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis to cAMP by DIF-1","termid":"GO:0061120"}


id: GO:0100024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates carbohydrate metabolic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of carbohydrate metabolic process by transcription from RNA polymerase II promoter (obsolete GO:0100024)","termid":"GO:0100024"}


id: PBO:0003516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component human N-recognin 7 homolog Mlo2","termid":"PBO:0003516"}


id: GO:0044619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism increases the extent of relaxation of smooth muscle in the uterus of a second organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of relaxation of uterine smooth muscle in another organism","termid":"GO:0044618"},{"relation_name":"is_a","term_name":"positive regulation of uterine smooth muscle relaxation","termid":"GO:1900721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of relaxation of uterine smooth muscle in another organism","synonyms":[{"name":"positive regulation of relaxation of uterine smooth muscle in other organism","type":"exact"}],"termid":"GO:0044619"}


id: PBO:0060535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 14 (putative)","termid":"PBO:0060535"}


id: PBO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates rhp51","termid":"PBO:0002102"}


id: GO:0034648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a methyl group from dimethylated lysine at position 4 of the histone H3 protein.","definition_xrefs":["GOC:mah","PMID:17550896"],"gene_count":0,"genotype_count":0,"name":"obsolete histone demethylase activity (H3-dimethyl-K4 specific) (obsolete GO:0034648)","synonyms":[{"name":"histone demethylase activity (H3-K4-me2 specific)","type":"exact"}],"termid":"GO:0034648"}


id: PBO:0052565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 2","termid":"PBO:0052565"}


id: GO:0032068
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of two proteins which acts as an endonuclease in DNA sequences containing a specific modified recognition site. Modifications may include methylation, hydroxymethylation, and glucosyl-hydroxymethylation.","definition_xrefs":["PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"type IV site-specific deoxyribonuclease complex","synonyms":[{"name":"type IV restriction enzyme complex","type":"exact"}],"termid":"GO:0032068"}


id: MONDO:0700255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraneoplastic syndrome that involves the renal system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"},{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic renal syndrome","termid":"MONDO:0700255","xrefs":{"Monarch":{"xref_id":"0700255"}}}


id: PBO:0005571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dihydrouridine synthase Dus4 (predicted)","termid":"PBO:0005571"}


id: PBO:0039585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANO3 antisense RNA 1","termid":"PBO:0039585"}


id: PBO:0014285
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDP syndrome","termid":"PBO:0014285"}


id: PBO:0029055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029055"}


id: MONDO:0013125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CLAPO syndrome is a newly described syndrome consisting of capillary malformation of the lower lip (C), lymphatic malformation of the face and neck (L), asymmetry of face and limbs (A) and partial or generalized overgrowth (O).","definition_xrefs":["Orphanet:168984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLAPO syndrome","secondary_identifiers":["GARD:17044","icd11.foundation:415642712","MESH:C567763","MEDGEN:416522","SCTID:717765001","OMIM:613089","UMLS:C2751313"],"synonyms":[{"name":"CLAPO syndrome, somatic","type":"exact"},{"name":"Clapo","type":"related"},{"name":"Lopez-Gutierrez syndrome","type":"related"},{"name":"capillary malformation of the LOWER LIP, lymphatic malformation of face and neck, asymmetry of face and limbs, and partial/generalized overgrowth","type":"related"}],"termid":"MONDO:0013125","xrefs":{"Monarch":{"xref_id":"0013125"}}}


id: GO:0030479
data:
  {"annotated_genes":["SJAG_02282","SJAG_01748","SJAG_03086","SJAG_00152","SJAG_02228","SJAG_02202","SJAG_03455","SJAG_00970","SJAG_02511","SJAG_01993","SJAG_01268","SJAG_04001","SJAG_00677","SJAG_03011","SJAG_01114","SJAG_02177","SJAG_01894","SJAG_00521","SJAG_04982","SJAG_01964","SJAG_02245","SJAG_04644","SJAG_03145","SJAG_01732","SJAG_04461","SJAG_04479","SJAG_00700","SJAG_04465","SJAG_00907","SJAG_03044","SJAG_04052","SJAG_03146","SJAG_03088","SJAG_04886","SJAG_02700","SJAG_04100","SJAG_02075","SJAG_04724","SJAG_00185","SJAG_00920","SJAG_04517","SJAG_00649","SJAG_03596","SJAG_03375","SJAG_03025","SJAG_03380","SJAG_01384","SJAG_03465","SJAG_03119","SJAG_04887","SJAG_02566"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87660,87766,89331,90182,90383,92039,92082,93151,93319,94296,94393,94780,97216,97413,98331,98391,98812,99175,99354,100409,100440,101205,101235,101997,102226,102544,102727,102789,104607,104625,104817,105486,106313,106351,106498,106623,107460,108196,108511,110134,110468,111116,111311,111608,111634,112347,113756,114321,115610,117926,118288],"is_not":false,"summary":null,"term":"GO:0030479"}]},"cv_name":"cellular_component","definition":"An endocytic patch that consists of an actin-containing structure found at the plasma membrane in cells; formed of networks of branched actin filaments that lie just beneath the plasma membrane and assemble, move, and disassemble rapidly. An example of this is the actin cortical patch found in Saccharomyces cerevisiae.","definition_xrefs":["ISBN:0879693568","PMID:16959963","GOC:vw","ISBN:0879693649","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic patch","termid":"GO:0061645"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00152":null,"SJAG_00185":null,"SJAG_00521":null,"SJAG_00649":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00907":null,"SJAG_00920":null,"SJAG_00970":null,"SJAG_01114":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01748":null,"SJAG_01894":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02177":null,"SJAG_02202":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02282":null,"SJAG_02511":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03044":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03145":null,"SJAG_03146":null,"SJAG_03375":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_03465":null,"SJAG_03596":null,"SJAG_04001":null,"SJAG_04052":null,"SJAG_04100":null,"SJAG_04461":null,"SJAG_04465":null,"SJAG_04479":null,"SJAG_04517":null,"SJAG_04644":null,"SJAG_04724":null,"SJAG_04886":null,"SJAG_04887":null,"SJAG_04982":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0015629","GO:0005737"],"is_obsolete":false,"name":"actin cortical patch","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005857"],"synonyms":[{"name":"actin patch","type":"exact"}],"termid":"GO:0030479","terms_by_termid":{"GO:0030479":null}}


id: PR:Q09175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- krp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dibasic-processing endoprotease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.09c","synonyms":[{"name":"KEX2-related protease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-krp1","type":"exact"}],"termid":"PR:Q09175"}


id: PATO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000906 f1 sterile (obsolete PATO:0000906)","synonyms":[{"name":"F1 infertile","type":"related"}],"termid":"PATO:0000906"}


id: GO:0086003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of a cardiac muscle cell.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"},{"relation_name":"part_of","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell contraction","termid":"GO:0086003"}


id: PBO:0073294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 16","termid":"PBO:0073294"}


id: PBO:0081526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 436","termid":"PBO:0081526"}


id: PBO:0061836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid growth factor receptor","termid":"PBO:0061836"}


id: PR:P28748
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:18422602","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1","termid":"PR:000027715"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.03c","secondary_identifiers":["UniProtKB:P28748","PR:000027716"],"synonyms":[{"name":"SPBC1289.03C","type":"related"},{"name":"Spom972h-spi1","type":"exact"}],"termid":"PR:P28748"}


id: PR:C6Y4B4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H4.21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4B4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H4.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.21","synonyms":[{"name":"Spom972h-SPAC23H4.21","type":"exact"}],"termid":"PR:C6Y4B4"}


id: PBO:0083634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF3b subunit of the eukaryotic translation initiation factor 3 (eIF3); subunit of the core complex of eIF3; essential for translation; part of a subcomplex (Prt1p-Rpg1p-Nip1p) that stimulates binding of mRNA and tRNA(i)Met to ribosomes; eIF3 is also involved in programmed stop codon readthrough","termid":"PBO:0083634"}


id: GO:0043010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye development","termid":"GO:0001654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye development","secondary_identifiers":["GO:0001747","GO:0031075"],"termid":"GO:0043010"}


id: PR:Q9URU4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URU4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C1289.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.15","synonyms":[{"name":"Spom972h-pfl5","type":"exact"}],"termid":"PR:Q9URU4"}


id: GO:0050039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + propane-1,2-diol = (S)-lactaldehyde + H+ + NADPH.","definition_xrefs":["RHEA:15885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactaldehyde reductase (NADPH) activity","secondary_identifiers":["EC:1.1.1.55","KEGG_REACTION:R02259","MetaCyc:RXN-15744"],"synonyms":[{"name":"1,2-propanediol:NADP+ oxidoreductase activity","type":"related"},{"name":"NADP-1,2-propanediol dehydrogenase activity","type":"related"},{"name":"lactaldehyde (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"propane-1,2-diol:NADP+ oxidoreductase activity","type":"related"},{"name":"propanediol dehydrogenase activity","type":"related"}],"termid":"GO:0050039"}


id: GO:0014847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the proximal stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The proximal stomach, composed of the fundus and upper body, shows low frequency, sustained tonic contractions that are responsible for generating a basal pressure within the stomach.","definition_xrefs":["GOC:mtg_muscle","PMID:30252381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonic smooth muscle contraction","termid":"GO:0014820"},{"relation_name":"is_a","term_name":"stomach smooth muscle contraction","termid":"GO:0120063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal stomach smooth muscle contraction","termid":"GO:0014847"}


id: PBO:0041215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 3","termid":"PBO:0041215"}


id: PBO:0084633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2634 methylation of the 25S rRNA; S-adenosylmethionine-dependent; associates with precursors of the 60S ribosomal subunit; predicted to be involved in ribosome biogenesis","termid":"PBO:0084633"}


id: GO:0009173
data:
  {"annotated_genes":["SJAG_04709","SJAG_00197","SJAG_04354","SJAG_00964","SJAG_03164","SJAG_03708","SJAG_00694","SJAG_00444","SJAG_04713","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111362,88964,98002,92919,116162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[67472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[87967,86983,92475,114358,91477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate metabolic process","termid":"GO:0009129"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate metabolic process","termid":"GO:0009161"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine ribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009173","terms_by_termid":{"GO:0009224":null,"GO:0044205":null,"GO:0044206":null}}


id: PBO:0054803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2216","termid":"PBO:0054803"}


id: PBO:0056286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANEA divergent transcript","termid":"PBO:0056286"}


id: PBO:0053203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 2","termid":"PBO:0053203"}


id: GO:0021890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a neuroblast becomes restricted such that it will develop into an interneuron residing in the olfactory bulb.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","PMID:12626695","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"olfactory bulb interneuron differentiation","termid":"GO:0021889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb interneuron fate commitment","termid":"GO:0021890"}


id: MONDO:0021222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"},{"relation_name":"is_a","term_name":"disorder of lacrimal gland","termid":"MONDO:0024625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"lacrimal gland neoplasm","secondary_identifiers":["NCIT:C4360","MEDGEN:83280","UMLS:C0339124"],"synonyms":[{"name":"lacrimal gland neoplasm (disease)","type":"exact"},{"name":"lacrimal gland tumor","type":"exact"},{"name":"lacrimal gland tumour","type":"exact"},{"name":"neoplasm of lacrimal gland","type":"exact"},{"name":"neoplasm of the lacrimal gland","type":"exact"},{"name":"tumor of lacrimal gland","type":"exact"},{"name":"tumor of the lacrimal gland","type":"exact"},{"name":"tumour of lacrimal gland","type":"exact"},{"name":"tumour of the lacrimal gland","type":"exact"}],"termid":"MONDO:0021222","xrefs":{"Monarch":{"xref_id":"0021222"}}}


id: PBO:0038813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20","termid":"PBO:0038813"}


id: PBO:0071597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 14","termid":"PBO:0071597"}


id: PBO:0069677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 954, pseudogene","termid":"PBO:0069677"}


id: PR:P36594
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02936","PANTHER:PTHR19376:SF14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.12","secondary_identifiers":["UniProtKB:P36594"],"synonyms":[{"name":"DNA-directed RNA polymerase III largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2A","type":"exact"}],"termid":"PR:P36594"}


id: GO:0004683
data:
  {"annotated_genes":["SJAG_02249","SJAG_01855","SJAG_02858","SJAG_03486"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74718,93069,100492,115934],"is_not":false,"summary":null,"term":"GO:0004683"}]},"cv_name":"molecular_function","definition":"Calmodulin-dependent catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; and ATP + a protein threonine = ADP + protein threonine phosphate. This activity require the presence of calcium-bound calmodulin.","definition_xrefs":["GOC:mah","PMID:11264466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01855":null,"SJAG_02249":null,"SJAG_02858":null,"SJAG_03486":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0140096","GO:0004672","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9618750","Reactome:R-HSA-9619367","Reactome:R-HSA-9619478","Reactome:R-HSA-9006992","GO:0004688","Reactome:R-HSA-9617583","GO:0004684","Reactome:R-HSA-111915","Reactome:R-HSA-111912","Reactome:R-HSA-9619125","Reactome:R-HSA-9619783","Reactome:R-HSA-9619355","Reactome:R-HSA-442749","GO:0004685","Reactome:R-HSA-416320","EC:2.7.11.17"],"synonyms":[{"name":"ATP:caldesmon O-phosphotransferase activity","type":"narrow"},{"name":"ATP:protein phosphotransferase (Ca2+/calmodulin-dependent) activity","type":"related"},{"name":"CAM PKII","type":"related"},{"name":"Ca2+/CaM-dependent kinase activity","type":"exact"},{"name":"Ca2+/calmodulin-dependent microtubule-associated protein 2 kinase activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase 1 activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase II activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase IV activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase activity","type":"related"},{"name":"Ca2+/calmodulin-dependent protein kinase kinase activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase kinase beta activity","type":"narrow"},{"name":"CaM kinase II activity","type":"narrow"},{"name":"CaM kinase activity","type":"related"},{"name":"CaM-regulated serine/threonine kinase activity","type":"related"},{"name":"CaMKI","type":"related"},{"name":"CaMKII","type":"related"},{"name":"CaMKIV","type":"related"},{"name":"CaMKKalpha","type":"related"},{"name":"CaMKKbeta","type":"related"},{"name":"STK20","type":"related"},{"name":"calcium- and calmodulin-dependent protein kinase activity","type":"exact"},{"name":"calcium/calmodulin-dependent protein kinase type II activity","type":"narrow"},{"name":"caldesmon kinase (phosphorylating) activity","type":"narrow"},{"name":"calmodulin regulated protein kinase activity","type":"exact"},{"name":"calmodulin-dependent kinase II activity","type":"narrow"},{"name":"calmodulin-dependent protein kinase I activity","type":"narrow"},{"name":"calmodulin-dependent protein kinase activity","type":"exact"},{"name":"microtubule-associated protein 2 kinase activity","type":"related"},{"name":"multifunctional calcium- and calmodulin-regulated protein kinase activity","type":"related"},{"name":"multifunctional calcium/calmodulin regulated protein kinase activity","type":"related"}],"termid":"GO:0004683","terms_by_termid":{"GO:0004683":null}}


id: PBO:0111350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophismin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani1/Fkbp39","termid":"PBO:0111350"}


id: FYPO:0006910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing vanoxerine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on vanoxerine","synonyms":[{"name":"normal cell population growth in presence of vanoxerine","type":"exact"},{"name":"normal cell population growth on vanoxerine","type":"exact"},{"name":"normal cellular response to vanoxerine","type":"related"},{"name":"normal vegetative cell population growth on vanoxerine","type":"exact"}],"termid":"FYPO:0006910"}


id: MONDO:0015030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"extraneural perineurioma","termid":"MONDO:0015031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerosing perineurioma","secondary_identifiers":["GARD:19729","icd11.foundation:924438028","MEDGEN:1843336","Orphanet:100001","UMLS:C5681811"],"termid":"MONDO:0015030","xrefs":{"Monarch":{"xref_id":"0015030"}}}


id: PBO:0091925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane brefeldin A efflux transporter Bfr1","termid":"PBO:0091925"}


id: PBO:0052308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0319 like","termid":"PBO:0052308"}


id: GO:0090591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetyl-mannosamine(out) = protein histidine +N-acetyl- mannosamine-6-phosphate(in).","definition_xrefs":["PMID:9864311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N-acetyl-mannosamine phosphotransferase system transporter activity","termid":"GO:0090591"}


id: PBO:0062561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AA member 1 pseudogene","termid":"PBO:0062561"}


id: PBO:0065700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine rich element binding protein B","termid":"PBO:0065700"}


id: GO:0071941
data:
  {"annotated_genes":["SJAG_05338","SJAG_00392","SJAG_00635","SJAG_02766","SJAG_03398","SJAG_04577","SJAG_00035","SJAG_04896","SJAG_04679","SJAG_00412","SJAG_01461","SJAG_04299"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90959,118428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043419"},{"annotations":[96852,112648,105986,110530,102934,97670,109920,91968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000050"},{"annotations":[94924,96324,113512,118429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019627"}]},"cv_name":"biological_process","definition":"A nitrogen compound metabolic process that contributes to the nitrogen cycle. The nitrogen cycle is a series of metabolic pathways by which nitrogen is converted between various forms and redox states; it encompasses pathways in which nitrogen is acted upon directly, such as nitrification, denitrification, nitrogen fixation, and mineralization.","definition_xrefs":["PMID:16675690","Wikipedia:Nitrogen_cycle","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_01461":null,"SJAG_02766":null,"SJAG_03398":null,"SJAG_04299":null,"SJAG_04577":null,"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrogen cycle metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071941","terms_by_termid":{"GO:0000050":null,"GO:0019627":null,"GO:0043419":null}}


id: PR:Q9HDU0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDU0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein PB2B2.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.17c","synonyms":[{"name":"Spom972h-SPBPB2B2.17c","type":"exact"}],"termid":"PR:Q9HDU0"}


id: PBO:0080239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 2","termid":"PBO:0080239"}


id: PBO:0017035
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nus1 can form a catalytically active complex with human DHDS (hCIT)","termid":"PBO:0017035"}


id: PBO:0066992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 295","termid":"PBO:0066992"}


id: MONDO:0700129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Translocation Down syndrome in which the extra (partial or total) copy of chromosome 21 attached to another chromosome is present in some of the cells of the organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"translocation Down syndrome","termid":"MONDO:0700128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic translocation Down syndrome","termid":"MONDO:0700129","xrefs":{"Monarch":{"xref_id":"0700129"}}}


id: GO:0008281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with sulfonylurea, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"sulfonylurea receptor activity","synonyms":[{"name":"sulphonylurea receptor activity","type":"exact"}],"termid":"GO:0008281"}


id: PBO:0063650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 7","termid":"PBO:0063650"}


id: MONDO:0000511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gallbladder adenoma (obsolete MONDO:0000511)","termid":"MONDO:0000511","xrefs":{"Monarch":{"xref_id":"0000511"}}}


id: FYPO:0003188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the import of protein into the nucleus is abnormal. Import of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"abnormal nuclear import","termid":"FYPO:0001217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein import into nucleus during vegetative growth","synonyms":[{"name":"abnormal protein import into nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003188"}


id: _global:involved_in_positive_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' positively regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"_global:involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_positive_regulation_of","secondary_identifiers":["RO:0002429"],"termid":"_global:involved_in_positive_regulation_of"}


id: GO:0031350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plastid membrane (obsolete GO:0031350)","synonyms":[{"name":"intrinsic to plastid membrane","type":"narrow"}],"termid":"GO:0031350"}


id: GO:0071494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-C radiation stimulus. UV-C radiation (UV-C light) spans the wavelengths 100 to 280 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV-C","termid":"GO:0010225"},{"relation_name":"is_a","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to UV-C","synonyms":[{"name":"cellular response to UV-C light stimulus","type":"exact"},{"name":"cellular response to UV-C radiation stimulus","type":"exact"},{"name":"cellular response to UVC light stimulus","type":"exact"},{"name":"cellular response to UVC radiation stimulus","type":"exact"},{"name":"cellular response to germicidal ultraviolet light stimulus","type":"exact"},{"name":"cellular response to germicidal ultraviolet radiation stimulus","type":"exact"},{"name":"cellular response to shortwave ultraviolet light stimulus","type":"exact"},{"name":"cellular response to shortwave ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0071494"}


id: GO:0140066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The crotonylation of a lysine residue in a protein. Crotonyl is the univalent radical CH3-CH=CH-CO- derived from crotonic acid.","definition_xrefs":["Wikipedia:crotonyl","PMID:25818647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine crotonylation","termid":"GO:0140066"}


id: PBO:0066142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBAK-RBAKDN readthrough","termid":"PBO:0066142"}


id: PBO:0028112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA_5'-leader_removal","termid":"PBO:0028112"}


id: GO:2001277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-leucine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"is_a","term_name":"regulation of L-leucine biosynthetic process","termid":"GO:2001276"},{"relation_name":"negatively_regulates","term_name":"L-leucine biosynthetic process","termid":"GO:0009098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"negative regulation of L-leucine biosynthetic process","synonyms":[{"name":"negative regulation of L-leucine anabolism","type":"exact"},{"name":"negative regulation of L-leucine biosynthesis","type":"exact"},{"name":"negative regulation of L-leucine formation","type":"exact"},{"name":"negative regulation of L-leucine synthesis","type":"exact"},{"name":"negative regulation of leucine biosynthetic process","type":"broad"}],"termid":"GO:2001277"}


id: PBO:0079593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D4 (putative)","termid":"PBO:0079593"}


id: PBO:0067058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 79, pseudogene","termid":"PBO:0067058"}


id: MONDO:0958230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome 20","secondary_identifiers":["DOID:0060962","OMIM:620718"],"termid":"MONDO:0958230","xrefs":{"Monarch":{"xref_id":"0958230"}}}


id: GO:0034730
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SMN-Sm protein complex formed by the association of the methylated Sm proteins B/B', D1, D2, D3, E, F, and G with the SMN complex.","definition_xrefs":["PMID:12975319","PMID:17401408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMN-Sm protein complex","termid":"GO:0034719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"SmD-containing SMN-Sm protein complex","synonyms":[{"name":"SMN-containing protein complex","type":"broad"}],"termid":"GO:0034730"}


id: PBO:0113462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of tail-anchored proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for normal mitochondrial morphology and inheritance; Get1p and Get2p form an aqueous channel for protein translocation and insertion into the membrane","termid":"PBO:0113462"}


id: PR:O94326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pir2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C725.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.08","synonyms":[{"name":"Spom972h-pir2","type":"exact"}],"termid":"PR:O94326"}


id: GO:0031646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a neurophysiological process.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nervous system process","synonyms":[{"name":"activation of neurological process","type":"narrow"},{"name":"positive regulation of neurological process","type":"exact"},{"name":"positive regulation of neurological system process","type":"exact"},{"name":"positive regulation of neurophysiological process","type":"exact"},{"name":"stimulation of neurological process","type":"narrow"},{"name":"up regulation of neurological process","type":"exact"},{"name":"up-regulation of neurological process","type":"exact"},{"name":"upregulation of neurological process","type":"exact"}],"termid":"GO:0031646"}


id: GO:0051958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of methotrexate, 4-amino-10-methylformic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Methotrexate is a folic acid analogue and a potent competitive inhibitor of dihydrofolate reductase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"methotrexate transport","termid":"GO:0051958"}


id: PBO:0036082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036082"}


id: GO:0051050
data:
  {"annotated_genes":["SJAG_03453","SJAG_00845","SJAG_01805","SJAG_01245","SJAG_04551","SJAG_04920","SJAG_03048","SJAG_02592","SJAG_02605","SJAG_03591","SJAG_00661","SJAG_00991","SJAG_04312","SJAG_05346","SJAG_04464","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"},{"annotations":[103185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045807"},{"annotations":[99668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[89438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[98380,109991,91250,92833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[91251,92834,98381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[92835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[93920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[93308,110462,99933,101342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[101874,90361,93878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"positively_regulates","term_name":"transport","termid":"GO:0006810"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_00845":null,"SJAG_00991":null,"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_02605":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03591":null,"SJAG_04312":null,"SJAG_04464":null,"SJAG_04551":null,"SJAG_04597":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of transport","type":"narrow"},{"name":"stimulation of transport","type":"narrow"},{"name":"up regulation of transport","type":"exact"},{"name":"up-regulation of transport","type":"exact"},{"name":"upregulation of transport","type":"exact"}],"termid":"GO:0051050","terms_by_termid":{"GO:0035432":null,"GO:0042307":null,"GO:0045807":null,"GO:0045921":null,"GO:0046827":null,"GO:1902854":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905665":null}}


id: GO:0009868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by jasmonic acid involved in jasmonic acid/ethylene (ethene) dependent systemic resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"jasmonic acid mediated signaling pathway","termid":"GO:0009867"},{"relation_name":"part_of","term_name":"response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0032260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway","synonyms":[{"name":"jasmonic acid and ethene-dependent systemic resistance, jasmonic acid mediated signaling pathway","type":"exact"},{"name":"jasmonic acid mediated signaling pathway (jasmonic acid/ethene-dependent systemic resistance)","type":"exact"},{"name":"jasmonic acid mediated signaling pathway (jasmonic acid/ethylene-dependent systemic resistance)","type":"exact"},{"name":"jasmonic acid/ethene-dependent systemic resistance, jasmonic acid mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethene-dependent systemic resistance, jasmonic acid mediated signalling pathway","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance, jasmonic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0009868"}


id: GO:0036083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of unsaturated fatty acid biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:9927444"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of unsaturated fatty acid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0036083)","termid":"GO:0036083"}


id: PBO:0077690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFAIP3 interacting protein 2","termid":"PBO:0077690"}


id: PBO:0032743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B epsilon subunit","termid":"PBO:0032743"}


id: PBO:0091795
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae VPS9","termid":"PBO:0091795"}


id: GO:0032345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aldosterone metabolic process","termid":"GO:0032344"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"aldosterone metabolic process","termid":"GO:0032341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"negative regulation of aldosterone metabolic process","synonyms":[{"name":"down regulation of aldosterone metabolic process","type":"exact"},{"name":"down-regulation of aldosterone metabolic process","type":"exact"},{"name":"downregulation of aldosterone metabolic process","type":"exact"},{"name":"inhibition of aldosterone metabolic process","type":"narrow"},{"name":"negative regulation of aldosterone metabolism","type":"exact"}],"termid":"GO:0032345"}


id: PBO:0003179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M B-type cyclin Cdc13","termid":"PBO:0003179"}


id: MOD:00591
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15549660","Unimod:271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:00591"}


id: PBO:0048004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 4B","termid":"PBO:0048004"}


id: PBO:0039837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 6","termid":"PBO:0039837"}


id: PBO:0055565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3001","termid":"PBO:0055565"}


id: MONDO:1010784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyoderma that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma, non-human animal","termid":"MONDO:1010142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoderma, dog","secondary_identifiers":["OMIA:001877-9615"],"termid":"MONDO:1010784","xrefs":{"Monarch":{"xref_id":"1010784"}}}


id: PBO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase Spi1","termid":"PBO:0004939"}


id: GO:0072282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric nephron tubule are generated and organized. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"is_a","term_name":"metanephric tubule morphogenesis","termid":"GO:0072173"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}


id: GO:0071430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains pre-microRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-miRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071430)","synonyms":[{"name":"pre-microRNA-containing RNP export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071430"}


id: GO:0051921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 L-glutamine + adenosylcob(III)yrinate a,c-diamide + 4 ATP + 4 H2O = 4 L-glutamate + adenosylcobyrate + 4 ADP + 8 H+ + 4 phosphate.","definition_xrefs":["EC:6.3.5.10","RHEA:23256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"adenosylcobyric acid synthase (glutamine-hydrolyzing) activity","secondary_identifiers":["KEGG_REACTION:R05225","MetaCyc:R345-RXN"],"synonyms":[{"name":"5'-deoxy-5'-adenosylcobyrinic-acid-a,c-diamide:L-glutamine amido-ligase activity","type":"exact"},{"name":"Ado-cobyric acid synthase [glutamine hydrolyzing] activity","type":"exact"},{"name":"CobQ activity","type":"broad"},{"name":"adenosylcobyric acid synthase (glutamine-hydrolysing) activity","type":"exact"},{"name":"adenosylcobyrinic-acid-a,c-diamide:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"cobyric acid synthase activity","type":"related"}],"termid":"GO:0051921"}


id: PBO:0059882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 5","termid":"PBO:0059882"}


id: PBO:0029829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_stubby_septated_vegetative_cell_population_(obsolete_FYPO:0002408)","termid":"PBO:0029829"}


id: PBO:0039126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis inducing factor mitochondria associated 3","termid":"PBO:0039126"}


id: PR:Q9UTI6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ethanolamine-phosphate cytidylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10739:SF14","PRO:DNx","OMA:SCHPO01554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine-phosphate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.05c","secondary_identifiers":["UniProtKB:Q9UTI6"],"synonyms":[{"name":"CTP:phosphoethanolamine cytidylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCYT2","type":"exact"},{"name":"phosphorylethanolamine transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI6"}


id: MONDO:0033010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratodermia variabilis","termid":"MONDO:0017851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis et progressiva 1","secondary_identifiers":["UMLS:C4551486","MEDGEN:1633225","DOID:0111195","OMIM:133200"],"synonyms":[{"name":"EKVP1","type":"related"},{"name":"Greither disease","type":"related"},{"name":"erythrokeratodermia Figurata, congenital familial, in plaques","type":"related"},{"name":"erythrokeratodermia variabilis","type":"related"},{"name":"erythrokeratodermia variabilis ET progressiva 1","type":"related"},{"name":"erythrokeratodermia variabilis Et progressiva","type":"related"},{"name":"erythrokeratodermia variabilis with erythema Gyratum Repens","type":"related"},{"name":"erythrokeratodermia, progressive symmetric","type":"related"},{"name":"keratosis palmoplantaris transgrediens Et progrediens","type":"related"}],"termid":"MONDO:0033010","xrefs":{"Monarch":{"xref_id":"0033010"}}}


id: GO:0102795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-naphthaldehyde + O2 + H2O = H+ + 1-naphthoate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-naphthaldehyde:oxygen oxidoreductase activity (obsolete GO:0102795)","termid":"GO:0102795"}


id: FYPO:0005055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two and more than one septum, and the septa are grouped together between the two compartments, one or more of which may contain multiple nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binucleate multiseptate vegetative cell","termid":"FYPO:0001223"},{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell, septa grouped","termid":"FYPO:0001254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"binucleate multiseptate cell, septa grouped","synonyms":[{"name":"binucleate multiseptate cell, septa grouped during mitotic cell cycle","type":"related"},{"name":"binucleate multiseptate cell, septa grouped during vegetative growth","type":"exact"}],"termid":"FYPO:0005055"}


id: MONDO:0000412
data:
  {"annotated_genes":["SJAG_03657","SJAG_03042","SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012245"},{"annotations":[86730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013322"},{"annotations":[85925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054846"}]},"cv_name":"mondo","definition":"An electroclinical syndrome with onset in the neonatal period less than 44 weeks of gestational age.","definition_xrefs":["PMID:20196795","PMID:22182677","DOID:0050702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electroclinical syndrome","termid":"MONDO:0000411"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_03042":null,"SJAG_03657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"neonatal period electroclinical syndrome","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0000412","terms_by_termid":{"MONDO:0012245":null,"MONDO:0013322":null,"MONDO:0054846":null},"xrefs":{"Monarch":{"xref_id":"0000412"}}}


id: GO:1900769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fonsecin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"fonsecin metabolic process","termid":"GO:1900767"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900787"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"fonsecin biosynthetic process","synonyms":[{"name":"fonsecin anabolism","type":"exact"},{"name":"fonsecin biosynthesis","type":"exact"},{"name":"fonsecin formation","type":"exact"},{"name":"fonsecin synthesis","type":"exact"}],"termid":"GO:1900769"}


id: PBO:0062806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 6","termid":"PBO:0062806"}


id: GO:0034750
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the Scribble protein (a cell polarity determinant), the tumor suppressor protein adenomatous polyposis coli (APC), and beta-catenin; may be involved in the control of cell proliferation.","definition_xrefs":["PMID:16611247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Scrib-APC-beta-catenin complex","synonyms":[{"name":"hScrib-APC-beta-catenin complex","type":"narrow"}],"termid":"GO:0034750"}


id: PBO:0030165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alpha,alpha-trehalase_activity_during_sporulation","termid":"PBO:0030165"}


id: MONDO:0003713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"angiokeratoma","termid":"MONDO:0003143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angiokeratoma circumscriptum","secondary_identifiers":["SCTID:21848000","icd11.foundation:225334653","NCIT:C7751","MEDGEN:120485","UMLS:C0263638","DOID:5949"],"termid":"MONDO:0003713","xrefs":{"Monarch":{"xref_id":"0003713"}}}


id: MONDO:0008126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oncogene Yuasa (obsolete MONDO:0008126)","secondary_identifiers":["OMIM:164891"],"synonyms":[{"name":"oncogene Yuasa","type":"exact"}],"termid":"MONDO:0008126","xrefs":{"Monarch":{"xref_id":"0008126"}}}


id: PR:Q09707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyltransferase C18B11.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.09c","synonyms":[{"name":"Spom972h-SPAC18B11.09c","type":"exact"}],"termid":"PR:Q09707"}


id: MONDO:0007011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A manifestation of sarcoidosis marked by chronic inflammation of the parotid gland and the uvea.","definition_xrefs":["MESH:D014608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uveoparotid fever","secondary_identifiers":["icd11.foundation:2079034902","SCTID:31541009","SCTID:4416007","UMLS:C0042171","DOID:13404","MEDGEN:22600","EFO:1001232"],"synonyms":[{"name":"Heerfordt's syndrome","type":"exact"},{"name":"uveoparotid fever","type":"exact"}],"termid":"MONDO:0007011","xrefs":{"Monarch":{"xref_id":"0007011"}}}


id: PBO:0017617
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Marie-Tooth disease","termid":"PBO:0017617"}


id: PBO:0041934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 2","termid":"PBO:0041934"}


id: MONDO:0016490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemoglobin C - beta-thalassemia (HbC - BT) is a form of beta-thalassemia resulting in moderate hemolytic anemia.","definition_xrefs":["Orphanet:231242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-thalassemia and related diseases","termid":"MONDO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemoglobin C-beta-thalassemia syndrome","secondary_identifiers":["MEDGEN:526128","UMLS:C0221020","GARD:20608"],"synonyms":[{"name":"C-beta-thalassemia","type":"exact"},{"name":"HBC-beta-thalassemia syndrome","type":"exact"}],"termid":"MONDO:0016490","xrefs":{"Monarch":{"xref_id":"0016490"}}}


id: MONDO:0017325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Early-onset epileptic encephalopathy and intellectual disability due to GRIN2A mutation is a rare intellectual disability and epilepsy syndrome characterized by global developmental delay and mild to profound intellectual disability, multiple types of usually intractable focal and generalized seizures with variable abnormal EEG findings, and bilateral progressive parenchymal volume loss and thin corpus callosum on brain MRI.","definition_xrefs":["Orphanet:289266"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"early-onset epileptic encephalopathy and intellectual disability due to GRIN2A mutation","secondary_identifiers":["icd11.foundation:1655554340","MEDGEN:1663334","UMLS:C4749281","OMIM:613971","GARD:21134"],"synonyms":[{"name":"early-onset epileptic encephalopathy and intellectual disability due to GRIN2A mutation","type":"exact"}],"termid":"MONDO:0017325","xrefs":{"Monarch":{"xref_id":"0017325"}}}


id: PBO:0087029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L14A; N-terminally acetylated; homologous to mammalian ribosomal protein L14, no bacterial homolog; RPL14A has a paralog, RPL14B, that arose from the whole genome duplication","termid":"PBO:0087029"}


id: PBO:0030076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_arginine_import","termid":"PBO:0030076"}


id: FYPO:0001233
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[118704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount, distribution, composition or morphology of a cell part is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal subcellular component","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03250","SJAG_02763"],"single_locus_genotype_uniquenames":["ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta"],"synonyms":[{"name":"normal subcellular structure","type":"related"}],"termid":"FYPO:0001233","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: GO:1905290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CAMKK-AMPK signaling cascade.","definition_xrefs":["GOC:TermGenie","PMID:22128786","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium-mediated signaling","termid":"GO:0050849"},{"relation_name":"is_a","term_name":"regulation of CAMKK-AMPK signaling cascade","termid":"GO:1905289"},{"relation_name":"negatively_regulates","term_name":"CAMKK-AMPK signaling cascade","termid":"GO:0061762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of CAMKK-AMPK signaling cascade","synonyms":[{"name":"down regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"down regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"down-regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"down-regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"downregulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"downregulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"inhibition of CAMKK-AMPK signaling cascade","type":"narrow"},{"name":"inhibition of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"negative regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:1905290"}


id: PBO:0042320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD40 molecule","termid":"PBO:0042320"}


id: MONDO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endemic bacterial infection caused by Treponema carateum. It is manifested with chronic cutaneous lesions. The early lesions consist of papules and erythematous plaques. The late lesions consist of hypochromic, achromic, hyperpigmented and atrophic lesions. The late skin lesions may cause destruction of bones and cartilage and produce disfiguring changes.","definition_xrefs":["NCIT:C85011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Treponema infectious disease","termid":"MONDO:0007000"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pinta disease","secondary_identifiers":["MESH:D010874","UMLS:C0031946","DOID:1022","ICD9:103.9","NORD:1580","SCTID:22064009","ICD9:103","ICD9:103.0","ICD9:103.3","MEDGEN:45926","ICD9:103.1","ICD9:103.2"],"synonyms":[{"name":"Azul","type":"related"},{"name":"Carate","type":"related"},{"name":"Empeines","type":"related"},{"name":"Lota","type":"related"},{"name":"Mal del pinto","type":"related"},{"name":"Pinta","type":"exact"},{"name":"Tina","type":"related"},{"name":"endemic treponematosis caused by Treponema carateum","type":"related"},{"name":"infection by Treponema carateum","type":"related"},{"name":"pinta","type":"exact"}],"termid":"MONDO:0000979","xrefs":{"Monarch":{"xref_id":"0000979"}}}


id: FYPO:0007386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B occurs to a lower extent than normal. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0005607"},{"relation_name":"is_a","term_name":"decreased protein ubiquitination","termid":"FYPO:0007946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H2B-K119 ubiquitination during vegetative growth","synonyms":[{"name":"decreased histone H2B conserved C-terminal lysine ubiquitination during vegetative growth","type":"exact"},{"name":"decreased histone H2B-K119 ubiquitination during mitotic cell cycle","type":"related"},{"name":"reduced histone H2B-K119 ubiquitination during vegetative growth","type":"exact"}],"termid":"FYPO:0007386"}


id: PBO:0042452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 5","termid":"PBO:0042452"}


id: PBO:0056043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor tyrosine kinase","termid":"PBO:0056043"}


id: GO:0031687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A2A adenosine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"A2A adenosine receptor binding","synonyms":[{"name":"A2A adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031687"}


id: PR:O13957
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H4.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H4.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.16c","synonyms":[{"name":"Spom972h-SPAC23H4.16c","type":"exact"}],"termid":"PR:O13957"}


id: PBO:0076895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 49","termid":"PBO:0076895"}


id: PBO:0049666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyanthranilate 3,4-dioxygenase","termid":"PBO:0049666"}


id: MONDO:0014423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency (SCID) due to DNA-PKcs deficiency is an extremely rare type of SCID characterized by the classical signs of SCID (severe and recurrent infections, diarrhea, failure to thrive), absence of T and B lymphocytes, and cell sensitivity to ionizing radiation.","definition_xrefs":["Orphanet:317425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency due to DNA-PKcs deficiency","secondary_identifiers":["MEDGEN:863270","SCTID:716871006","DOID:0111961","OMIM:615966","UMLS:C4014833","GARD:17441"],"synonyms":[{"name":"IMD26","type":"related"},{"name":"SCID due to DNA-PKcs deficiency","type":"exact"},{"name":"immunodeficiency 26 with or without neurologic abnormalities","type":"related"},{"name":"immunodeficiency 26, with or without neurologic abnormalities","type":"exact"}],"termid":"MONDO:0014423","xrefs":{"Monarch":{"xref_id":"0014423"}}}


id: PBO:0074263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 5A1","termid":"PBO:0074263"}


id: FYPO:0004846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of DNA replication pause sites in telomeric regions at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PMID:26041456","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Rad52 foci at telomeres","synonyms":[{"name":"increased number of Rad22 foci at telomeres","type":"exact"},{"name":"increased number of Rad52 foci at telomeres during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci at telomeres during vegetative growth","type":"exact"}],"termid":"FYPO:0004846"}


id: PBO:0036098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K36_methylation_during_vegetative_growth","termid":"PBO:0036098"}


id: PBO:0036299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom6 (predicted)","termid":"PBO:0036299"}


id: GO:0032256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a dense core granule to a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of secretory granule localization","termid":"GO:0032254"},{"relation_name":"part_of","term_name":"dense core granule localization","termid":"GO:0032253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of dense core granule localization","synonyms":[{"name":"establishment of dense core granule localisation","type":"exact"},{"name":"establishment of dense core vesicle localization","type":"exact"}],"termid":"GO:0032256"}


id: PBO:0039369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMMECR nuclear protein 1","termid":"PBO:0039369"}


id: MONDO:0012362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the PLN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1P","secondary_identifiers":["OMIM:609909","MESH:C563690","MEDGEN:322782","GARD:15469","UMLS:C1835928","DOID:0110439"],"synonyms":[{"name":"CMD1P","type":"exact"},{"name":"PLN familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1P","type":"exact"},{"name":"cardiomyopathy, dilated, type 1P","type":"exact"},{"name":"dilated cardiomyopathy type 1P","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in PLN","type":"exact"}],"termid":"MONDO:0012362","xrefs":{"Monarch":{"xref_id":"0012362"}}}


id: PBO:0085083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear encoded protein needed for splicing of mitochondrial intron; required for efficient splicing of mitochondrial COX1 aI5beta intron; mss18 mutations block cleavage of 5' exon - intron junction; phenotype of intronless strain suggests additional functions","termid":"PBO:0085083"}


id: PATO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the anterior-posterior axis.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positional polarity","termid":"PATO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior-posterior polarity","synonyms":[{"name":"rostral-caudal polarity ","type":"exact"},{"name":"superior-caudal polarity (human torso)","type":"exact"}],"termid":"PATO:0002024"}


id: PBO:0072086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 16","termid":"PBO:0072086"}


id: MONDO:0010857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Semantic dementia (SD) is a form of frontotemporal dementia (FTD), characterized by the progressive, amodal and profound loss of semantic knowledge (combination of visual associative agnosia, anomia, surface dyslexia or dysgraphia and disrupted comprehension of word meaning) and behavioral abnormalities, attributable to the degeneration of the anterior temporal lobes.","definition_xrefs":["Orphanet:100069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive non-fluent aphasia","termid":"MONDO:0015059"},{"relation_name":"is_a","term_name":"behavioral variant of frontotemporal dementia","termid":"MONDO:0017160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"semantic dementia","secondary_identifiers":["UMLS:C0338462","MEDGEN:83268","GARD:10792","OMIM:600274","NANDO:1200550","DOID:0081391"],"synonyms":[{"name":"FTD","type":"related"},{"name":"Ftdp17","type":"related"},{"name":"Ftld with Tau inclusions","type":"related"},{"name":"Pallidopontonigral Degeneration","type":"related"},{"name":"Pick Complex","type":"related"},{"name":"Wilhelmsen-Lynch disease","type":"related"},{"name":"dementia, frontotemporal","type":"exact"},{"name":"dementia, frontotemporal, with Parkinsonism","type":"related"},{"name":"dementia, frontotemporal, with or without parkinsonism","type":"exact"},{"name":"disinhibition-dementia-Parkinsonism-amyotrophy Complex","type":"related"},{"name":"frontotemporal dementia","type":"related"},{"name":"frontotemporal dementia with Parkinsonism","type":"related"},{"name":"frontotemporal lobar Degeneration with Tau inclusions","type":"related"},{"name":"frontotemporal lobe dementia","type":"related"},{"name":"multiple system tauopathy with presenile dementia","type":"related"},{"name":"semantic primary progressive aphasia","type":"exact"},{"name":"semantic variant PPA","type":"exact"}],"termid":"MONDO:0010857","xrefs":{"Monarch":{"xref_id":"0010857"}}}


id: PBO:0108544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex MRG family subunit Alp13","termid":"PBO:0108544"}


id: PBO:0078643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 1-1","termid":"PBO:0078643"}


id: PR:Q10423
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cce1 gene.","definition_xrefs":["UniProtKB:Q10423","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cruciform cutting endonuclease 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.02","synonyms":[{"name":"Spom972h-cce1","type":"exact"},{"name":"protein ydc2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10423"}


id: SO:0001035
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/PiRNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:piRNA","type":"exact"},{"name":"piwi-associated RNA","type":"exact"}],"termid":"SO:0001035"}


id: PBO:0059303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L49 pseudogene 2","termid":"PBO:0059303"}


id: GO:1901355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rapamycin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to rapamycin","termid":"GO:1901355"}


id: PBO:0052993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMA4 antisense RNA 1","termid":"PBO:0052993"}


id: PBO:0088535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin-A, F-box protein Pof4","termid":"PBO:0088535"}


id: GO:1901761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving oxytetracycline.","definition_xrefs":["PMID:8163168","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"oxytetracycline metabolic process","synonyms":[{"name":"oxytetracycline metabolism","type":"exact"}],"termid":"GO:1901761"}


id: PBO:0042956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 10","termid":"PBO:0042956"}


id: PBO:0055649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3089","termid":"PBO:0055649"}


id: GO:0007225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The posttranslational modification of members of the Hedgehog family of signaling proteins in order for Hedgehog to exert its biological activity. These modifications include cleavage of its signal sequence, autocatalytic protein cleavage and the attachment of sterol groups.","definition_xrefs":["PMID:15057936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"patched ligand maturation","synonyms":[{"name":"Hedgehog protein processing","type":"narrow"},{"name":"hh protein processing","type":"exact"},{"name":"patched ligand processing","type":"related"}],"termid":"GO:0007225"}


id: MONDO:0016742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor of the central nervous system characterized by the presence of at least two types of germ cell neoplasia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed extragonadal germ cell cancer","termid":"MONDO:0000524"},{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mixed germ cell tumor of central nervous system","secondary_identifiers":["GARD:20736","UMLS:C1334785","NCIT:C7016","Orphanet:252021","MEDGEN:233713"],"synonyms":[{"name":"CNS mixed germ cell tumor","type":"exact"},{"name":"CNS mixed germ cell tumour","type":"exact"},{"name":"central nervous system mixed germ cell tumor","type":"exact"},{"name":"central nervous system mixed germ cell tumour","type":"exact"},{"name":"mixed germ cell neoplasm of the central nervous system","type":"exact"},{"name":"mixed germ cell tumor of CNS","type":"exact"},{"name":"mixed germ cell tumor of the CNS","type":"exact"},{"name":"mixed germ cell tumor of the central nervous system","type":"exact"},{"name":"mixed germ cell tumour of CNS","type":"exact"},{"name":"mixed germ cell tumour of the CNS","type":"exact"},{"name":"mixed germ cell tumour of the central nervous system","type":"exact"}],"termid":"MONDO:0016742","xrefs":{"Monarch":{"xref_id":"0016742"}}}


id: GO:0071012
data:
  {"annotated_genes":["SJAG_04117","SJAG_01504","SJAG_04783","SJAG_04898","SJAG_01315"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100179,105242,94894,96340,116660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071006"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the displacement of the two snRNPs from the precatalytic spliceosome; three snRNPs including U5 remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the associated snRNPs.","definition_xrefs":["GOC:krc","PMID:19239890","PMID:18322460","GOC:mah","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01315":null,"SJAG_01504":null,"SJAG_04117":null,"SJAG_04783":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"catalytic step 1 spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activated spliceosome","type":"exact"},{"name":"mammalian spliceosomal complex B*","type":"narrow"},{"name":"mammalian spliceosomal complex B2","type":"narrow"},{"name":"yeast spliceosomal complex A1","type":"narrow"}],"termid":"GO:0071012","terms_by_termid":{"GO:0071006":null}}


id: PBO:0049081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 137","termid":"PBO:0049081"}


id: MOD:00377
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-histidine residue and 5'-phosphouridine through a phosphoramide ester bond to form 1'-(phospho-5'-uridine)-L-histidine.","definition_xrefs":["PubMed:8794735","Unimod:417#H","PubMed:11467524","PubMed:321007","PubMed:380639","RESID:AA0372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"uridylated residue","termid":"MOD:01166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(phospho-5'-uridine)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-[1-(5'-uridine phosphono)imidazol-4-yl]propanoic acid","type":"exact"},{"name":"1'-(phospho-5'-uridine)-L-histidine","type":"exact"},{"name":"ACT_SITE Tele-UMP-histidine intermediate","type":"exact"},{"name":"L-histidine 5'-uridine phosphoramidester","type":"exact"},{"name":"L-histidine monoanhydride with 5'-uridylic acid","type":"exact"},{"name":"MOD_RES O-UMP-histidine","type":"exact"},{"name":"N(tau)-5'-uridylic-L-histidine","type":"exact"},{"name":"N1'-uridylylated histidine","type":"exact"},{"name":"PhosphoUridine","type":"related"},{"name":"tele-5'-uridylic-L-histidine","type":"exact"},{"name":"uridine phosphodiester","type":"related"}],"termid":"MOD:00377"}


id: MONDO:1012258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal dysplasia, non-human animal","termid":"MONDO:1011953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, domestic cat","secondary_identifiers":["OMIA:000937-9685"],"termid":"MONDO:1012258","xrefs":{"Monarch":{"xref_id":"1012258"}}}


id: GO:0110097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium import into the mitochondrion.","definition_xrefs":["PMID:24085037","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium import into the mitochondrion","termid":"GO:0036444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium import into the mitochondrion","termid":"GO:0110097"}


id: PBO:0003158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase Ada1 (predicted)","termid":"PBO:0003158"}


id: PBO:0055563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2999","termid":"PBO:0055563"}


id: PBO:0002602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase (predicted)","termid":"PBO:0002602"}


id: PBO:0110426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP10 pseudogene 1","termid":"PBO:0110426"}


id: SO:0001981
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An orientation dependent regulatory promoter element, with consensus sequence of TTGCACAN4TTGCACA, found in plants.","definition_xrefs":["PMID:2902624","PMID:17381552","SO:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L_box","synonyms":[{"name":"L-box","type":"exact"},{"name":"L-box promoter element","type":"exact"}],"termid":"SO:0001981"}


id: SO:1001244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001244 alternatively_spliced_transcript_encoding_greater_than_1_polypeptide_different_start_codon_different_stop_codon_coding_regions_non_overlapping (obsolete SO:1001244)","synonyms":[{"name":"alternatively_spliced_transcript_encoding_greater_than_1_polypeptide_different_start_codon_different_stop_codon_coding_regions_non-overlapping","type":"related"}],"termid":"SO:1001244"}


id: MONDO:0009693
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86855],"is_not":false,"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A bone marrow-based plasma cell neoplasm characterized by a serum monoclonal protein and skeletal destruction with osteolytic lesions, pathological fractures, bone pain, hypercalcemia, and anemia. Clinical variants include non-secretory myeloma, smoldering myeloma, indolent myeloma, and plasma cell leukemia. (WHO, 2001)","definition_xrefs":["NCIT:C3242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"},{"relation_name":"is_a","term_name":"myeloid neoplasm","termid":"MONDO:0005170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"plasma cell myeloma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:10122","icd11.foundation:526287100","ONCOTREE:PCM","MedDRA:10028228","OMIM:254500","NORD:1469","Orphanet:29073","ICD10CM:C90.0","EFO:0001378","MESH:D009101","icd11.foundation:1582389689","UMLS:C0026764","ICD9:203.0","GARD:7108","DOID:9538","ICDO:9732/3"],"synonyms":[{"name":"Al amyloidosis","type":"related"},{"name":"Kahler disease","type":"exact"},{"name":"Kahler's disease","type":"exact"},{"name":"Multiple Myeloma","type":"exact"},{"name":"amyloidosis, systemic","type":"related"},{"name":"medullary plasmacytoma","type":"exact"},{"name":"multiple myeloma","type":"exact"},{"name":"multiple myeloma, resistance to, Somatic mutation","type":"exact"},{"name":"multiple myeloma, susceptibility to, Somatic mutation","type":"exact"},{"name":"multiple myeloma/plasma cell myeloma","type":"exact"},{"name":"myeloid neoplasm of plasma cell","type":"exact"},{"name":"myeloma","type":"exact"},{"name":"myeloma - multiple","type":"related"},{"name":"myeloma, multiple","type":"exact"},{"name":"myeloma, plasma cell, malignant","type":"exact"},{"name":"myelomatosis","type":"exact"},{"name":"plasma cell myeloid neoplasm","type":"exact"},{"name":"plasma cell myeloma","type":"exact"}],"termid":"MONDO:0009693","terms_by_termid":{"MONDO:0009693":null},"xrefs":{"Monarch":{"xref_id":"0009693"}}}


id: PBO:0033822
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HemeRYthrin-like domain","termid":"PBO:0033822"}


id: PBO:0003042
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.2","termid":"PBO:0003042"}


id: PBO:0072818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 12","termid":"PBO:0072818"}


id: PBO:0049187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grainyhead like transcription factor 3","termid":"PBO:0049187"}


id: PBO:0064962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 14","termid":"PBO:0064962"}


id: GO:1904070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ascaroside.","definition_xrefs":["GO_REF:0000068","GOC:kmv","GOC:TermGenie","PMID:25775534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"ascaroside metabolic process","termid":"GO:1904069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascaroside biosynthetic process","synonyms":[{"name":"ascaroside anabolism","type":"exact"},{"name":"ascaroside biosynthesis","type":"exact"},{"name":"ascaroside formation","type":"exact"},{"name":"ascaroside synthesis","type":"exact"}],"termid":"GO:1904070"}


id: PBO:0040063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPIN-AP3S2 readthrough","termid":"PBO:0040063"}


id: GO:0035479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of angioblasts from the lateral mesoderm to the midline which occurs as part of the formation of the early midline vasculature.","definition_xrefs":["PMID:11861480","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angioblast cell migration","termid":"GO:0035476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell migration from lateral mesoderm to midline","termid":"GO:0035479"}


id: PBO:0114093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase membrane subunit, Atp9","termid":"PBO:0114093"}


id: GO:0005507
data:
  {"annotated_genes":["SJAG_03322","SJAG_04553","SJAG_MIT20","SJAG_00802","SJAG_00449","SJAG_02399","SJAG_04677","SJAG_00668","SJAG_05398","SJAG_01996","SJAG_01140","SJAG_01694","SJAG_MIT04"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88379,91164,91963,95788,99651,101613,106329,106953,107321,114478,116499,116928,118463,118512],"is_not":false,"summary":null,"term":"GO:0005507"}]},"cv_name":"molecular_function","definition":"Binding to a copper (Cu) ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_00668":null,"SJAG_00802":null,"SJAG_01140":null,"SJAG_01694":null,"SJAG_01996":null,"SJAG_02399":null,"SJAG_03322":null,"SJAG_04553":null,"SJAG_04677":null,"SJAG_05398":null,"SJAG_MIT04":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"copper ion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"copper binding","type":"exact"},{"name":"copper/cadmium binding","type":"broad"}],"termid":"GO:0005507","terms_by_termid":{"GO:0005507":null}}


id: MONDO:0014076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal dominant mutation of RTEL1 on chromosome 20q13.33.","definition_xrefs":["DOID:0070020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dyskeratosis congenita and related telomere biology disorder","termid":"MONDO:0800467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 5","secondary_identifiers":["MEDGEN:767570","NCIT:C176928","UMLS:C3554656","OMIM:615190","DOID:0070022","GARD:15917"],"synonyms":[{"name":"DKCB5","type":"exact"},{"name":"autosomal recessive dyskeratosis congenita 5","type":"related"},{"name":"dyskeratosis congenita, autosomal dominant 4","type":"related"},{"name":"dyskeratosis congenita, autosomal recessive 5","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive type 5","type":"exact"}],"termid":"MONDO:0014076","xrefs":{"Monarch":{"xref_id":"0014076"}}}


id: MONDO:1012780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epidermolysis bullosa simplex that occurs in cattle due to a mutation in the KRT5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, cattle","termid":"MONDO:1011499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, KRT5-related, cattle","secondary_identifiers":["OMIA:002081-9913"],"termid":"MONDO:1012780","xrefs":{"Monarch":{"xref_id":"1012780"}}}


id: GO:0045921
data:
  {"annotated_genes":["SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99668],"is_not":false,"summary":null,"term":"GO:0045921"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of exocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of exocytosis","type":"narrow"},{"name":"stimulation of exocytosis","type":"narrow"},{"name":"up regulation of exocytosis","type":"exact"},{"name":"up-regulation of exocytosis","type":"exact"},{"name":"upregulation of exocytosis","type":"exact"}],"termid":"GO:0045921","terms_by_termid":{"GO:0045921":null}}


id: PBO:0045045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf like acrosomal protein 1","termid":"PBO:0045045"}


id: PBO:0062619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily Y member 1 pseudogene","termid":"PBO:0062619"}


id: GO:0018218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The phosphorylation of peptidyl-cysteine to form peptidyl-S-phospho-L-cysteine.","definition_xrefs":["RESID:AA0034"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine phosphorylation (obsolete GO:0018218)","termid":"GO:0018218"}


id: GO:0015051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of X-opioid receptors.","definition_xrefs":["InterPro:IPR001420"],"gene_count":0,"genotype_count":0,"name":"obsolete X-opioid receptor activity (obsolete GO:0015051)","synonyms":[{"name":"X-opioid receptor activity","type":"exact"}],"termid":"GO:0015051"}


id: GO:0043253
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribosome contained within a chloroplast.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid ribosome","termid":"GO:0009547"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast ribosome","termid":"GO:0043253"}


id: PBO:0088959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex actin-related protein subunit Arp3","termid":"PBO:0088959"}


id: PBO:0109284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylitol dehydrogenase","termid":"PBO:0109284"}


id: MONDO:0003587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm arising from adipocytes, that occurs in children. The tumor maybe one of several histologic types including well-differentiated, dedifferentiated, myxoid/round cell, and pleomorphic liposarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric liposarcoma","secondary_identifiers":["MEDGEN:83580","NANDO:2200065","UMLS:C0279984","NCIT:C8091","DOID:5695"],"synonyms":[{"name":"childhood liposarcoma","type":"exact"},{"name":"liposarcoma","type":"broad"},{"name":"pediatric liposarcoma","type":"exact"}],"termid":"MONDO:0003587","xrefs":{"Monarch":{"xref_id":"0003587"}}}


id: PBO:0057950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3672","termid":"PBO:0057950"}


id: MONDO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malaria that involves infection with more than one species of Plasmodium at the same time.","definition_xrefs":["DOID:14325","PMID:15105024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malaria","termid":"MONDO:0005136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"mixed malaria","secondary_identifiers":["SCTID:21070001","ICD9:084.5","UMLS:C0153121","MEDGEN:509155"],"synonyms":[{"name":"malaria by more than one parasite","type":"exact"},{"name":"malaria fever by more than one parasite","type":"exact"}],"termid":"MONDO:0001944","xrefs":{"Monarch":{"xref_id":"0001944"}}}


id: GO:0060506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane Smoothened-type protein. This process contributes to lung development.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in lung development","synonyms":[{"name":"hedgehog signaling pathway involved in lung development","type":"exact"},{"name":"hh signaling pathway involved in lung development","type":"exact"},{"name":"smoothened signalling pathway involved in lung development","type":"exact"}],"termid":"GO:0060506"}


id: GO:0061526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of acetylcholine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine transport","termid":"GO:0015870"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"acetylcholine secretion","termid":"GO:0061526"}


id: MONDO:0025494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by outbreaks of late term abortions, high numbers of stillbirths and mummified or weak newborn piglets, and respiratory disease in young unweaned and weaned pigs. It is caused by porcine respiratory and reproductive syndrome virus. (Radostits et al., Veterinary Medicine, 8th ed, p1048)","definition_xrefs":["MESH:D019318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porcine reproductive and respiratory syndrome","synonyms":[{"name":"PRRS","type":"exact"},{"name":"blue eared pig disease","type":"exact"},{"name":"blue-eared pig disease","type":"exact"},{"name":"mystery swine disease","type":"exact"},{"name":"pig disease, blue-eared","type":"exact"},{"name":"porcine epidemic abortion and respiratory syndrome","type":"exact"},{"name":"swine disease, mystery","type":"related"},{"name":"swine infertility and respiratory syndrome","type":"exact"}],"termid":"MONDO:0025494","xrefs":{"Monarch":{"xref_id":"0025494"}}}


id: PBO:0050061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLCS antisense RNA 1","termid":"PBO:0050061"}


id: PBO:0091979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf20","termid":"PBO:0091979"}


id: GO:0005460
data:
  {"annotated_genes":["SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111820],"is_not":false,"summary":null,"term":"GO:0005460"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucose from one side of a membrane to the other. UDP-glucose is a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"UDP-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005460","terms_by_termid":{"GO:0005460":null}}


id: PR:O13799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mtl1 gene.","definition_xrefs":["UniProtKB:O13799","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized helicase C17H9.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.02","synonyms":[{"name":"Spom972h-mtl1","type":"exact"}],"termid":"PR:O13799"}


id: GO:0050322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taurine + 2-oxoglutarate = sulfoacetaldehyde + L-glutamate.","definition_xrefs":["PMID:16535664","RHEA:16353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"taurine-2-oxoglutarate transaminase activity","secondary_identifiers":["EC:2.6.1.55","MetaCyc:RXN-2301"],"synonyms":[{"name":"taurine aminotransferase activity","type":"exact"},{"name":"taurine transaminase activity","type":"exact"},{"name":"taurine--alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"taurine--glutamate transaminase activity","type":"related"},{"name":"taurine:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0050322"}


id: MONDO:0001249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic infection of the conjunctiva and cornea caused by chlamydia trachomatis.","definition_xrefs":["MESH:D014141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlamydia trachomatis infectious disease","termid":"MONDO:0005701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trachoma","secondary_identifiers":["UMLS:C0040592","ICD9:076.0","DOID:11265","icd11.foundation:372424530","SCTID:2576002","MEDGEN:52801","ICD9:076.1","ICD9:076.9","ICD9:076"],"synonyms":[{"name":"active stage trachoma","type":"exact"},{"name":"trachoma dubium","type":"exact"}],"termid":"MONDO:0001249","xrefs":{"Monarch":{"xref_id":"0001249"}}}


id: GO:0009662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an etioplast. An etioplast is a plastid arrested in the development of chloroplasts from proplastids due to absence of light or low light conditions.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"etioplast organization","synonyms":[{"name":"etioplast organisation","type":"exact"},{"name":"etioplast organization and biogenesis","type":"related"}],"termid":"GO:0009662"}


id: GO:0034494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the microneme membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"microneme","termid":"GO:0020009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microneme lumen","termid":"GO:0034494"}


id: PBO:0047698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLYWCH-type zinc finger 1 pseudogene 1","termid":"PBO:0047698"}


id: PBO:0063872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C pseudogene 1","termid":"PBO:0063872"}


id: PBO:0004426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr4 homolog 1 (predicted)","termid":"PBO:0004426"}


id: PBO:0084853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; MRPL7 produces both YmL5 and YmL7, which are two different modified forms of the same protein","termid":"PBO:0084853"}


id: PBO:0088260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit Sgf73","termid":"PBO:0088260"}


id: GO:0090282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of target genes that are transcribed as part of the G2/M transition of the mitotic cell cycle.","definition_xrefs":["PMID:10899128","PMID:10747051","PMID:10959837","PMID:10894548","GOC:rn"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in G2/M transition of mitotic cell cycle (obsolete GO:0090282)","synonyms":[{"name":"activation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"activation of transcription from RNA polymerase II promoter during G2/M-phase of the mitotic cell cycle","type":"exact"},{"name":"activation of transcription involved in G2/M transition of mitotic cell cycle","type":"exact"},{"name":"positive regulation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter during G2/M-phase of the mitotic cell cycle","type":"exact"},{"name":"up-regulation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter during G2/M transition of the mitotic cell cycle","type":"exact"},{"name":"up-regulation of transcription involved in G2/M transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0090282"}


id: PR:P0CT64
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S16-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.14","synonyms":[{"name":"Spom972h-rps1601","type":"exact"}],"termid":"PR:P0CT64"}


id: PBO:0030900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_stress_during_vegetative_growth","termid":"PBO:0030900"}


id: PBO:0026908
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_chromosome_centromere_condensation","termid":"PBO:0026908"}


id: GO:0034604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + NAD+ = acetyl-CoA + CO2 + NADH.","definition_xrefs":["GOC:mah","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase [NAD(P)+] activity","termid":"GO:0034603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"pyruvate dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:PYRUVDEH-RXN","RHEA:28042","EC:1.2.1.104","KEGG_REACTION:R00209"],"termid":"GO:0034604"}


id: SO:0000926
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a CU dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000926 insert_CU (obsolete SO:0000926)","synonyms":[{"name":"insert CU","type":"exact"}],"termid":"SO:0000926"}


id: GO:0044026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An increase in the epigenetic methylation of cytosine and adenosine residues in DNA.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA hypermethylation (obsolete GO:0044026)","termid":"GO:0044026"}


id: PBO:0041817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CARMIL2 pseudogene 1","termid":"PBO:0041817"}


id: GO:0039675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or a viral particle out of the host cell nucleus through the nuclear pore.","definition_xrefs":["VZ:1953","PMID:12921991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit of virus from host cell nucleus","termid":"GO:0039674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus through nuclear pore","synonyms":[{"name":"exit of virus from host cell nucleus through nuclear pore complex","type":"exact"},{"name":"nuclear pore exit of virus","type":"exact"},{"name":"viral enome export through nuclear pore","type":"exact"}],"termid":"GO:0039675"}


id: PBO:0059911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 34","termid":"PBO:0059911"}


id: PBO:0071705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 3","termid":"PBO:0071705"}


id: FYPO:0007108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering takes place during meiotic prophase I, and remains incomplete. Normally, centromeres and SPBs associate during prometaphase I, but not earlier.","definition_xrefs":["PMID:15298676","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic centromere clustering","termid":"FYPO:0004086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic centromere clustering during meiotic prophase I","synonyms":[{"name":"abnormal centromere clustering during meiotic prophase I","type":"exact"},{"name":"abnormal chromosome retrieval during meiotic prophase I","type":"related"},{"name":"abnormal kinetochore retrieval during meiotic prophase I","type":"related"},{"name":"abnormal meiotic centromere clustering during prophase I","type":"exact"},{"name":"increased unclustered centromeres during meiotic prophase I","type":"related"},{"name":"premature meiotic centromere clustering during meiotic prophase I","type":"related"}],"termid":"FYPO:0007108"}


id: MONDO:1012922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any centronuclear myopathy that occurs in dogs due to a mutation in the DNM2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, dog","termid":"MONDO:1010918"},{"relation_name":"is_a","term_name":"centronuclear myopathy, non-human animal","termid":"MONDO:1012963"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centronuclear myopathy, DNM2-related, dog","secondary_identifiers":["OMIA:002534-9615"],"synonyms":[{"name":"ADCNM","type":"exact"},{"name":"autosomal dominant centronuclear myopathy","type":"related"},{"name":"centronuclear myopathy 1, DNM2-related, dog","type":"exact"}],"termid":"MONDO:1012922","xrefs":{"Monarch":{"xref_id":"1012922"}}}


id: PBO:0112987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase required for biogenesis of small ribosomal subunit; conserved 18S rRNA cytosine acetyltransferase that modifies tRNAs assisted by adaptor Tan1p; responsible for incorporation of N4-acetylcytidine into mRNAs; human homolog NAT10 implicated in several types of cancer and premature aging","termid":"PBO:0112987"}


id: MOD:01520
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A distinct molecular entity produced as the result of a fragmentation process performed on a particular modified residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reporter fragment","termid":"MOD:01519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modification reporter fragment","termid":"MOD:01520"}


id: MOD:01044
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00080. Remap to MOD:00080.","definition_xrefs":["DeltaMass:166"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01044 N-methyl glutamyl (obsolete MOD:01044)","termid":"MOD:01044"}


id: MONDO:0013699
data:
  {"annotated_genes":["SJAG_02187"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85170],"is_not":false,"summary":null,"term":"MONDO:0013699"}]},"cv_name":"mondo","definition":"Any hereditary nonpolyposis colon cancer in which the cause of the disease is a mutation in the PMS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Lynch syndrome","termid":"MONDO:0005835"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0000426"],"is_obsolete":false,"name":"Lynch syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614337","UMLS:C1838333","MESH:C563971","MEDGEN:325005","GARD:15791","DOID:0070275"],"synonyms":[{"name":"HNPCC4","type":"related"},{"name":"PMS2 hereditary nonpolyposis colon cancer","type":"exact"},{"name":"colorectal cancer, hereditary nonpolyposis, type 4","type":"exact"},{"name":"hereditary nonpolyposis colon cancer caused by mutation in PMS2","type":"exact"}],"termid":"MONDO:0013699","terms_by_termid":{"MONDO:0013699":null},"xrefs":{"Monarch":{"xref_id":"0013699"}}}


id: PBO:0040688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast carcinoma amplified sequence 4","termid":"PBO:0040688"}


id: PBO:0078390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-5","termid":"PBO:0078390"}


id: FYPO:0000698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA-7-methylguanine glycosylase activity","synonyms":[{"name":"reduced DNA-7-methylguanine glycosylase activity","type":"exact"}],"termid":"FYPO:0000698"}


id: GO:0008654
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  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chemical reactions and pathways resulting in the formation of a phospholipid, a lipid containing phosphoric acid as a mono- or diester.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic 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id: GO:0090428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the perianth over time, from its formation to the mature structure. The perianth is a collective phyllome structure composed of two or more petals, sepals, or tepals.","definition_xrefs":["PO:0009058","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perianth development","termid":"GO:0090428"}


id: GO:0042468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell or organism in response to a stimulus in which the frequency or magnitude of turning behavior is altered.","definition_xrefs":["PMID:2790068","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesis","termid":"GO:0042465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"klinokinesis","termid":"GO:0042468"}


id: GO:0018004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formylation of the N-terminal amino acid of proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein formylation","termid":"GO:0018256"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein formylation","termid":"GO:0018004"}


id: GO:1900837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ergot alkaloid biosynthetic process","termid":"GO:1900822"},{"relation_name":"regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"regulation of fumigaclavine C anabolism","type":"exact"},{"name":"regulation of fumigaclavine C biosynthesis","type":"exact"},{"name":"regulation of fumigaclavine C formation","type":"exact"},{"name":"regulation of fumigaclavine C synthesis","type":"exact"}],"termid":"GO:1900837"}


id: PBO:0038511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 2","termid":"PBO:0038511"}


id: PBO:0027742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_camptothecin","termid":"PBO:0027742"}


id: PBO:0087040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L19B; rpl19a and rpl19b single null mutations result in slow growth, while the double null mutation is lethal; homologous to mammalian ribosomal protein L19, no bacterial homolog; RPL19B has a paralog, RPL19A, that arose from the whole genome duplication","termid":"PBO:0087040"}


id: PBO:0062410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 37 pseudogene","termid":"PBO:0062410"}


id: PBO:0062059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 6 pseudogene","termid":"PBO:0062059"}


id: GO:0048396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"is_a","term_name":"regulation of intermediate mesodermal cell fate determination","termid":"GO:0048395"},{"relation_name":"negatively_regulates","term_name":"intermediate mesodermal cell fate determination","termid":"GO:0048394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intermediate mesodermal cell fate determination","synonyms":[{"name":"down regulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"downregulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"inhibition of intermediate mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048396"}


id: GO:1900984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of vindoline.","definition_xrefs":["GOC:TermGenie","GOC:yaf","MetaCyc:PWY-5292"],"gene_count":0,"genotype_count":0,"name":"obsolete vindoline catabolic process (obsolete GO:1900984)","synonyms":[{"name":"vindoline breakdown","type":"exact"},{"name":"vindoline catabolism","type":"exact"},{"name":"vindoline degradation","type":"exact"}],"termid":"GO:1900984"}


id: GO:0061485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a memory T cell population by cell division.","definition_xrefs":["GOC:dph","PMID:14647273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory T cell proliferation","termid":"GO:0061485"}


id: MONDO:0100025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by onset of refractory focal seizures in the first year of life, with associated severe encephalopathy. Focal seizures arise independently in both hemispheres and can migrate from one cortical region to another randomly but consecutively in the same seizure. Seizures are often prolonged with episodes of status epilepticus. Prognosis is poor with severe neurological disability and reduced life expectancy, although a milder evolution has been reported in a few children.","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal/infantile epilepsy syndrome","termid":"MONDO:0100022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy of infancy with migrating focal seizures","secondary_identifiers":["NANDO:1200595","SCTID:733195008","MEDGEN:1381392","icd11.foundation:1727727812","UMLS:C4518639"],"synonyms":[{"name":"EIMFS","type":"exact"}],"termid":"MONDO:0100025","xrefs":{"Monarch":{"xref_id":"0100025"}}}


id: GO:0005508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete copper/cadmium binding (obsolete GO:0005508)","synonyms":[{"name":"copper/cadmium binding","type":"exact"}],"termid":"GO:0005508"}


id: MONDO:0020603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genodermatosis with great phenotypic variation and characterized most commonly by ichthyosis, chondrodysplasia punctata (CDP), asymmetric shortening of the limbs, cataracts and short stature.","definition_xrefs":["Orphanet:35173"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked ichthyosis syndrome","termid":"MONDO:0017269"},{"relation_name":"is_a","term_name":"X-linked chondrodysplasia punctata","termid":"MONDO:0010556"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"X-linked chondrodysplasia punctata 2","secondary_identifiers":["NANDO:1200630","MEDGEN:79381","OMIM:302960","DOID:0080352","NORD:1005","NANDO:2201357","UMLS:C0282102","GARD:6189"],"synonyms":[{"name":"CDPX2","type":"exact"},{"name":"CDPXD","type":"exact"},{"name":"Conrad Hunermann Happle syndrome","type":"exact"},{"name":"Conradi Hunermann syndrome","type":"exact"},{"name":"Conradi Hünermann Syndrome","type":"exact"},{"name":"Conradi-Hunermann syndrome","type":"exact"},{"name":"Conradi-Hunermann-Happle syndrome","type":"exact"},{"name":"Conradi-Hünermann-Happle syndrome","type":"exact"},{"name":"EBP chondrodysplasia punctata","type":"exact"},{"name":"Happle syndrome","type":"exact"},{"name":"X-linked chondrodysplasia punctata type 2","type":"exact"},{"name":"chondrodysplasia punctata 2 X-linked dominant","type":"exact"},{"name":"chondrodysplasia punctata 2, X-linked dominant","type":"exact"},{"name":"chondrodysplasia punctata caused by mutation in EBP","type":"exact"},{"name":"chondrodysplasia punctata, X-linked dominant, X-linked dominant","type":"exact"}],"termid":"MONDO:0020603","xrefs":{"Monarch":{"xref_id":"0020603"}}}


id: PBO:0085283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane signal receptor for peroxisomal matrix proteins; receptor for the C-terminal tripeptide signal sequence (PTS1) of peroxisomal matrix proteins; required for peroxisomal matrix protein import; also proposed to have PTS1-receptor independent functions","termid":"PBO:0085283"}


id: MONDO:0010029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital condition in which there is complete right-to-left reversal of the position of the major thoracic and abdominal organs (that is, they are arranged in a mirror image of the normal positioning).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus","secondary_identifiers":["ICD9:759.3","NCIT:C87121","MEDGEN:1642262","Orphanet:101063","SCTID:24614000","UMLS:C4551493","icd11.foundation:797648408","HP:0001696","DOID:758","GARD:4883","ICD9:759.89","MESH:D012857","ICD10CM:Q89.3"],"synonyms":[{"name":"complete situs inversus","type":"exact"},{"name":"complete situs inversus viscerum","type":"exact"},{"name":"complete transposition (morphologic abnormality)","type":"exact"},{"name":"laterality sequence","type":"exact"},{"name":"situs ambiguus","type":"related"},{"name":"situs inversus","type":"exact"},{"name":"situs inversus totalis","type":"exact"},{"name":"situs inversus totalis (disease)","type":"exact"}],"termid":"MONDO:0010029","xrefs":{"Monarch":{"xref_id":"0010029"}}}


id: FYPO:0003870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the amount of protein encoded by genes normally induced by exposure to cadmium ions measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PMID:20133687","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during G0","termid":"FYPO:0003866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of cadmium-induced proteins during G0","synonyms":[{"name":"increased level of cadmium-induced proteins during cell quiescence","type":"exact"},{"name":"increased level of cadmium-induced proteins during quiescence","type":"exact"},{"name":"increased level of proteins expressed during cellular response to cadmium during G0","type":"exact"},{"name":"increased level of proteins induced by cadmium during G0","type":"exact"},{"name":"increased protein level of genes (normally) induced during cadmium stress during G0","type":"exact"}],"termid":"FYPO:0003870"}


id: GO:0070073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which voltage-gated calcium channels become localized together in high densities.","definition_xrefs":["GOC:sart","PMID:18385325","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ion channel clustering","termid":"GO:0045161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"clustering of voltage-gated calcium channels","synonyms":[{"name":"clustering of voltage gated calcium channels","type":"exact"},{"name":"clustering of voltage-dependent calcium channels","type":"exact"},{"name":"voltage-gated calcium channel clustering","type":"exact"}],"termid":"GO:0070073"}


id: PBO:0045288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 39","termid":"PBO:0045288"}


id: GO:0015471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy independent passage of nucleoside, sized less than 1000 Da, across a membrane. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"},{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nucleoside-specific channel forming porin activity","termid":"GO:0015471"}


id: GO:0004561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-alpha-D-glucosaminides.","definition_xrefs":["EC:3.2.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"alpha-N-acetylglucosaminidase activity","secondary_identifiers":["Reactome:R-HSA-9036052","Reactome:R-HSA-2090038","Reactome:R-HSA-1678742","Reactome:R-HSA-2263496","MetaCyc:3.2.1.50-RXN"],"synonyms":[{"name":"N-acetyl-alpha-D-glucosaminidase activity","type":"related"},{"name":"N-acetyl-alpha-glucosaminidase activity","type":"related"},{"name":"NAG activity","type":"related"},{"name":"alpha-D-2-acetamido-2-deoxyglucosidase activity","type":"related"},{"name":"alpha-N-acetyl-D-glucosaminide N-acetylglucosaminohydrolase activity","type":"related"},{"name":"alpha-acetylglucosaminidase activity","type":"related"}],"termid":"GO:0004561"}


id: GO:1905474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in stem cell proliferation.","definition_xrefs":["PMID:25640183","GOC:bc","GO_REF:0000060","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in stem cell proliferation (obsolete GO:1905474)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in stem cell proliferation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in stem cell proliferation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in stem cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in stem cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in stem cell proliferation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in stem cell proliferation","type":"narrow"}],"termid":"GO:1905474"}


id: FYPO:0004259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic G2 DNA damage checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. Normally, the mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["PMID:21098122","PomBase:mah","GO:0007095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000298","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abolished G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abolished mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abolished mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abolished mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"mitotic G2 DNA damage checkpoint abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0004259"}


id: PBO:0042244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 6","termid":"PBO:0042244"}


id: GO:1904729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intestinal lipid absorption.","definition_xrefs":["GOC:TermGenie","PMID:18768481","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"regulates","term_name":"intestinal lipid absorption","termid":"GO:0098856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal lipid absorption","termid":"GO:1904729"}


id: PBO:0059854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 7","termid":"PBO:0059854"}


id: PR:O42956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- art1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.08c","synonyms":[{"name":"Spom972h-art1","type":"exact"}],"termid":"PR:O42956"}


id: GO:0098624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylylselenate + NADPH => adenosine 3',5'-bisphosphate + selenite + NADP+ + H+.","definition_xrefs":["PMID:14723223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3'-phosphoadenylylselenate reductase activity","secondary_identifiers":["Reactome:R-HSA-2408548"],"synonyms":[{"name":"PAPSe reductase activity","type":"exact"}],"termid":"GO:0098624"}


id: FYPO:0005660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of crossover associated with a gene conversion event during meiotic recombination is decreased.","definition_xrefs":["PMID:25414342","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal frequency of meiotic crossover associated with gene conversion","termid":"FYPO:0005658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased frequency of meiotic crossover associated with gene conversion","synonyms":[{"name":"decreased levels of meiotic crossover associated with a gene conversion event","type":"exact"},{"name":"reduced frequency of meiotic crossover associated with gene conversion","type":"exact"}],"termid":"FYPO:0005660"}


id: GO:1903061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein lipidation.","definition_xrefs":["GOC:rph","GO_REF:0000058","PMID:21909394","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"positive regulation of lipoprotein metabolic process","termid":"GO:0050747"},{"relation_name":"is_a","term_name":"regulation of protein lipidation","termid":"GO:1903059"},{"relation_name":"positively_regulates","term_name":"protein lipidation","termid":"GO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein lipidation","synonyms":[{"name":"activation of lipid:protein modification","type":"narrow"},{"name":"activation of protein amino acid lipidation","type":"narrow"},{"name":"activation of protein lipidation","type":"narrow"},{"name":"positive regulation of lipid:protein modification","type":"exact"},{"name":"positive regulation of protein amino acid lipidation","type":"exact"},{"name":"up regulation of lipid:protein modification","type":"exact"},{"name":"up regulation of protein amino acid lipidation","type":"exact"},{"name":"up regulation of protein lipidation","type":"exact"},{"name":"up-regulation of lipid:protein modification","type":"exact"},{"name":"up-regulation of protein amino acid lipidation","type":"exact"},{"name":"up-regulation of protein lipidation","type":"exact"},{"name":"upregulation of lipid:protein modification","type":"exact"},{"name":"upregulation of protein amino acid lipidation","type":"exact"},{"name":"upregulation of protein lipidation","type":"exact"}],"termid":"GO:1903061"}


id: GO:0075053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by the symbiont of a peg-like structure for the purpose of penetration into its host organism, which penetrates through the host cuticle and epidermal cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:26441323","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration peg formation","secondary_identifiers":["GO:0075057"],"synonyms":[{"name":"formation of symbiont penetration peg for entry into host","type":"related"},{"name":"initiation of symbiont penetration peg","type":"narrow"},{"name":"symbiont penetration peg formation for entry into host","type":"related"},{"name":"symbiont penetration peg initiation","type":"narrow"}],"termid":"GO:0075053"}


id: GO:0102803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: thebaine + 2-oxoglutarate + O2 = oripavine + formaldehyde + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete thebane O-demethylase activity (obsolete GO:0102803)","termid":"GO:0102803"}


id: PBO:0065788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase catalytic subunit 1 pseudogene 1","termid":"PBO:0065788"}


id: PBO:0081638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 566","termid":"PBO:0081638"}


id: GO:0099502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulatory process by which increased cytosolic calcium levels lead to the the fusion of synaptic vesicles with the presynaptic active zone membrane by bringing primed synaptic vesicle membrane into contact with membrane presynaptic active zone membrane.","definition_xrefs":["PMID:23060190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031632"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0023052","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0099502"}


id: PBO:0071736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 34","termid":"PBO:0071736"}


id: GO:0045026
data:
  {"annotated_genes":["SJAG_00870","SJAG_02351","SJAG_02878","SJAG_04887","SJAG_02924"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109652,94793,91863,95870,100690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032220"}]},"cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane that surround a cell with that of another cell, producing a single cell.","definition_xrefs":["GOC:elh","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00870":null,"SJAG_02351":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane fusion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006947"],"synonyms":[{"name":"cell fusion","type":"broad"},{"name":"cell-cell fusion","type":"broad"}],"termid":"GO:0045026","terms_by_termid":{"GO:0032220":null}}


id: PBO:0064267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G1","termid":"PBO:0064267"}


id: PBO:0077091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 6","termid":"PBO:0077091"}


id: SO:0001156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between -10 and -60 relative to the TSS. Consensus sequence is WATCGATW.","definition_xrefs":["PMID:12537576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRE_motif","synonyms":[{"name":"DRE motif","type":"exact"},{"name":"NDM4","type":"exact"},{"name":"WATCGATW_motif","type":"exact"}],"termid":"SO:0001156"}


id: PBO:0084986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP(+)-dependent glutamate dehydrogenase; synthesizes glutamate from ammonia and alpha-ketoglutarate; rate of alpha-ketoglutarate utilization differs from Gdh1p; expression regulated by nitrogen and carbon sources; GDH3 has a paralog, GDH1, that arose from the whole genome duplication","termid":"PBO:0084986"}


id: PBO:0060581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 18, pseudogene","termid":"PBO:0060581"}


id: GO:1903645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chaperone-mediated protein folding.","definition_xrefs":["PMID:24375412","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein folding","termid":"GO:1903333"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated protein folding","termid":"GO:1903644"},{"relation_name":"negatively_regulates","term_name":"chaperone-mediated protein folding","termid":"GO:0061077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0008150","GO:0006457"],"is_obsolete":false,"name":"negative regulation of chaperone-mediated protein folding","synonyms":[{"name":"down regulation of chaperone-mediated protein folding","type":"exact"},{"name":"down-regulation of chaperone-mediated protein folding","type":"exact"},{"name":"downregulation of chaperone-mediated protein folding","type":"exact"},{"name":"inhibition of chaperone-mediated protein folding","type":"narrow"}],"termid":"GO:1903645"}


id: MONDO:0008720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypopituitarrium that is characterized by a decreased or absent production of adrenocorticotropic hormone by the pituitary gland.","definition_xrefs":["DOID:0080150","Wikipedia:Adrenocorticotropic_hormone_deficiency","PMID:27041067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"},{"relation_name":"is_a","term_name":"isolated congenital hypogonadotropic hypogonadism","termid":"MONDO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital isolated adrenocorticotropic hormone deficiency","secondary_identifiers":["ICD9:255.41","MEDGEN:137968","UMLS:C0342388","MESH:C535668","EFO:1001979","GARD:5727","OMIM:201400","Orphanet:199296","SCTID:237692001","HP:0011748"],"synonyms":[{"name":"ACTH deficiency, isolated","type":"related"},{"name":"IAD","type":"related"},{"name":"adrenocorticotropic hormone deficiency","type":"exact"},{"name":"congenital isolated ACTH deficiency","type":"related"},{"name":"congenital isolated adrenocorticotropic hormone deficiency (disease)","type":"exact"},{"name":"isolated ACTH deficiency","type":"related"},{"name":"isolated adrenocorticotropic hormone deficiency","type":"related"}],"termid":"MONDO:0008720","xrefs":{"Monarch":{"xref_id":"0008720"}}}


id: PBO:0032726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_stress_response_gene_antisense_RNA_level","termid":"PBO:0032726"}


id: FYPO:0005603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint","termid":"FYPO:0002341"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","termid":"FYPO:0005268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"delayed mitotic DNA damage checkpoint deactivation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"prolonged mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005603"}


id: PBO:0031029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_organization","termid":"PBO:0031029"}


id: PBO:0086130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for initiation of G0 program; prevents degradation of nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway; phosphorylated by Rim15p; GFP protein localizes to the cytoplasm and nucleus; IGO1 has a paralog, IGO2, that arose from the whole genome duplication","termid":"PBO:0086130"}


id: PBO:0065677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type Z1","termid":"PBO:0065677"}


id: PBO:0090716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S2","termid":"PBO:0090716"}


id: GO:0043308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as major basic protein, eosinophil peroxidase, and eosinophil cationic protein by an eosinophil.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"eosinophil activation involved in immune response","termid":"GO:0002278"},{"relation_name":"part_of","term_name":"eosinophil mediated immunity","termid":"GO:0002447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"eosinophil degranulation","synonyms":[{"name":"eosinophil granule exocytosis","type":"exact"}],"termid":"GO:0043308"}


id: PBO:0045885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 epsilon 1","termid":"PBO:0045885"}


id: GO:0035325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like protein, a pattern recognition receptor that binds pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:19076341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Toll-like receptor binding","synonyms":[{"name":"TLR binding","type":"exact"}],"termid":"GO:0035325"}


id: PBO:0077733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNS1 antisense RNA 1","termid":"PBO:0077733"}


id: PBO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta small subunit Cdc1","termid":"PBO:0002321"}


id: PBO:0079687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family domain containing 1 pseudogene 1","termid":"PBO:0079687"}


id: PBO:0090745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBC28E12.04 ortholog, syntenic position","termid":"PBO:0090745"}


id: MONDO:0008857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beemer-Ertbruggen syndrome is a lethal malformation syndrome reported in 2 brothers of first-cousin parents that is characterized by hydrocephalus, cardiac malformation, dense bones, and unusual facies with down-slanting palpebral fissures, bulbous nose, broad nasal bridge, micrognathia and a long upper lip. Transmission is likely autosomal recessive. There have been no further descriptions in the literature since 1984.","definition_xrefs":["Orphanet:1237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beemer-Ertbruggen syndrome","secondary_identifiers":["SCTID:717859007","MESH:C537668","OMIM:209970","MEDGEN:347174","GARD:846","UMLS:C1859526"],"synonyms":[{"name":"Beemer Ertbruggen syndrome","type":"related"},{"name":"Beemer lethal malformation syndrome","type":"related"},{"name":"hydrocephalus, Cardiac malformation, dense bones, etc.","type":"related"},{"name":"hydrocephalus, cardiac malformation, dense bones, etc","type":"related"},{"name":"lethal hydrocephalus-cardiac malformation-dense bones syndrome","type":"exact"},{"name":"peculiar facial appearance, hydrocephalus, double-outlet right ventricle, genital anomalies and dense bones with lethal outcome","type":"related"}],"termid":"MONDO:0008857","xrefs":{"Monarch":{"xref_id":"0008857"}}}


id: PBO:0070566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 32","termid":"PBO:0070566"}


id: GO:0090314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting to membrane","termid":"GO:0090313"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"protein targeting to membrane","termid":"GO:0006612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0006605"],"is_obsolete":false,"name":"positive regulation of protein targeting to membrane","termid":"GO:0090314"}


id: PBO:0089682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex HMG box protein Hap2","termid":"PBO:0089682"}


id: PR:P87054
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 15 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.06","synonyms":[{"name":"Spom972h-mug15","type":"exact"}],"termid":"PR:P87054"}


id: GO:0030915
data:
  {"annotated_genes":["SJAG_00213","SJAG_02545","SJAG_03436","SJAG_01776","SJAG_01332","SJAG_05323","SJAG_03702","SJAG_04932"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87556,88565,89263,105771,110938,116681,117028,117301],"is_not":false,"summary":null,"term":"GO:0030915"}]},"cv_name":"cellular_component","definition":"A conserved complex that contains a heterodimer of SMC proteins (Smc5p and Smc6p, or homologs thereof) and several other proteins, and is involved in DNA repair and maintaining cell cycle arrest following DNA damage. In S. cerevisiae, this is an octameric complex called Mms21-Smc5-Smc6 complex, with at least five of its subunits conserved in fission yeast and humans.","definition_xrefs":["PMID:15738391","PMID:27373152","PMID:14701739","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"part_of","term_name":"condensed chromosome","termid":"GO:0000793"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00213":null,"SJAG_01332":null,"SJAG_01776":null,"SJAG_02545":null,"SJAG_03436":null,"SJAG_03702":null,"SJAG_04932":null,"SJAG_05323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"Smc5-Smc6 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030915","terms_by_termid":{"GO:0030915":null}}


id: PBO:0110338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBLN pseudogene 1","termid":"PBO:0110338"}


id: MONDO:0014403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature due to GHSR deficiency is a rare, genetic, endocrine growth disease, resulting from growth hormone secretagogue receptor (GHSR) deficiency, characterized by postnatal growth delay that results in short stature (less than -2 SD). The pituitary gland is typically without morphological changes, although anterior pituitary gland hypoplasia has been reported.","definition_xrefs":["Orphanet:314811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-acquired pituitary hormone deficiency","termid":"MONDO:0019824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature due to GHSR deficiency","secondary_identifiers":["UMLS:C4707848","GARD:17436","OMIM:615925","SCTID:766817004","MEDGEN:1633096"],"synonyms":[{"name":"GHDP","type":"related"},{"name":"ghrelin receptor deficiency","type":"exact"},{"name":"growth hormone deficiency, isolated partial","type":"related"},{"name":"short stature due to growth hormone secretagogue receptor deficiency","type":"exact"}],"termid":"MONDO:0014403","xrefs":{"Monarch":{"xref_id":"0014403"}}}


id: PBO:0113360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for uridine thiolation of Gln, Lys, and Glu tRNAs; required for the thiolation of uridine at the wobble position of Gln, Lys, and Glu tRNAs; has a role in urmylation and in invasive and pseudohyphal growth; inhibits replication of Brome mosaic virus in S. cerevisiae; localizes to cytosol and peroxisomes","termid":"PBO:0113360"}


id: MONDO:0056816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine carcinoma that arises from the vulva. This category includes small cell and large cell neuroendocrine carcinoma. Most small cell neuroendocrine carcinomas of the vulva are Merkel cell carcinomas.","definition_xrefs":["NCIT:C128243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"vulvar carcinoma","termid":"MONDO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar neuroendocrine carcinoma","secondary_identifiers":["UMLS:C4288002","MEDGEN:925534"],"synonyms":[{"name":"mammalian vulva neuroendocrine carcinoma","type":"exact"},{"name":"neuroendocrine carcinoma of mammalian vulva","type":"exact"},{"name":"vulvar Neuroendocrine cancer","type":"exact"},{"name":"vulvar Neuroendocrine carcinoma","type":"exact"},{"name":"vulvar high grade Neuroendocrine carcinoma","type":"exact"},{"name":"vulvar high grade Neuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0056816","xrefs":{"Monarch":{"xref_id":"0056816"}}}


id: PR:O74345
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ucp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.05c","synonyms":[{"name":"Spom972h-ucp3","type":"exact"}],"termid":"PR:O74345"}


id: PBO:0015678
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High Copy Sterile","termid":"PBO:0015678"}


id: MONDO:0001411
data:
  {"annotated_genes":["SJAG_04995","SJAG_03249","SJAG_04270","SJAG_02165","SJAG_02200"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[84614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"},{"annotations":[84963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[85069,85070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009039"},{"annotations":[86142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013740"}]},"cv_name":"mondo","definition":"A disease characterized by abnormal union between adjacent bones or parts of a single bone formed by osseous material, such as ossified connecting cartilage or fibrous tissue.","definition_xrefs":["MESH:D013580","Wikipedia:Synostosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02165":null,"SJAG_02200":null,"SJAG_03249":null,"SJAG_04270":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"synostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:11971","MEDGEN:11689","UMLS:C0039093"],"termid":"MONDO:0001411","terms_by_termid":{"MONDO:0008726":null,"MONDO:0009039":null,"MONDO:0013740":null,"MONDO:0014558":null,"MONDO:0020667":null},"xrefs":{"Monarch":{"xref_id":"0001411"}}}


id: PBO:0056539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mast cell expressed membrane protein 1","termid":"PBO:0056539"}


id: MONDO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm with neuroendocrine differentiation that arises from the ovary. It includes carcinoid tumor, small cell carcinoma pulmonary type, and large cell neuroendocrine carcinoma.","definition_xrefs":["NCIT:C5237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian neuroendocrine neoplasm","secondary_identifiers":["MEDGEN:277459","DOID:3002","UMLS:C1335172"],"synonyms":[{"name":"neuroendocrine neoplasm of ovary","type":"exact"},{"name":"neuroendocrine neoplasm of the ovary","type":"exact"},{"name":"neuroendocrine tumor of ovary","type":"exact"},{"name":"neuroendocrine tumour of ovary","type":"exact"},{"name":"ovarian neuroendocrine neoplasm","type":"exact"},{"name":"ovary NET","type":"exact"},{"name":"ovary neuroendocrine neoplasm","type":"exact"},{"name":"ovary neuroendocrine tumor","type":"exact"},{"name":"ovary neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"ovary neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0002481","xrefs":{"Monarch":{"xref_id":"0002481"}}}


id: GO:0044169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the host cell rough endoplasmic reticulum.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endoplasmic reticulum membrane","termid":"GO:0044167"},{"relation_name":"part_of","term_name":"host cell rough endoplasmic reticulum","termid":"GO:0044168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell rough endoplasmic reticulum membrane","synonyms":[{"name":"host rough endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0044169"}


id: PBO:0005085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin involved in translation initiation (predicted)","termid":"PBO:0005085"}


id: GO:2000247
data:
  {"annotated_genes":["SJAG_04461","SJAG_00661","SJAG_00845","SJAG_01799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93243,99667,103187,104826],"is_not":false,"summary":null,"term":"GO:2000247"},{"annotations":[103188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment or maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"},{"relation_name":"is_a","term_name":"positive regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000771"},{"relation_name":"positively_regulates","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000247","terms_by_termid":{"GO:0061361":null,"GO:2000247":null}}


id: PBO:0005420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex subunit Rec11","termid":"PBO:0005420"}


id: PBO:0091270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein Gep3","termid":"PBO:0091270"}


id: PBO:0072488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 17","termid":"PBO:0072488"}


id: PBO:0000235
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.1","termid":"PBO:0000235"}


id: GO:0035654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a macromolecular complex between proteins of the AP-3 adaptor complex and proteins and/or lipoproteins that are going to be transported by a clathrin-coated vesicle. In some cases, the AP-3 complex is a heterotetrameric AP-type membrane coat adaptor complex that, in some organisms, links clathrin to the membrane surface of a vesicle.","definition_xrefs":["GOC:lb","PMID:12802059","PMID:16162817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle cargo loading","termid":"GO:0035652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"clathrin-coated vesicle cargo loading, AP-3-mediated","synonyms":[{"name":"cargo loading into clathrin-coated vesicle, AP-3-mediated","type":"exact"}],"termid":"GO:0035654"}


id: GO:1903879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 11beta-hydroxyprogesterone.","definition_xrefs":["GOC:mr","GO_REF:0000067","PMID:10802282","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"11beta-hydroxyprogesterone binding","termid":"GO:1903879"}


id: PBO:0038962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADM divergent transcript","termid":"PBO:0038962"}


id: MONDO:0002561
data:
  {"annotated_genes":["SJAG_00570","SJAG_04790","SJAG_02131","SJAG_04706","SJAG_03052","SJAG_04323","SJAG_05182","SJAG_01407","SJAG_00158","SJAG_01868","SJAG_02139","SJAG_02949","SJAG_04819","SJAG_02068","SJAG_04295","SJAG_05175","SJAG_03824","SJAG_02518","SJAG_02056","SJAG_02716"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012221"},{"annotations":[84705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012222"},{"annotations":[85963,85962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"},{"annotations":[84862,84864,84863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019149"},{"annotations":[84538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010155"},{"annotations":[86132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010526"},{"annotations":[84906,84909,84905,84907,84908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010027"},{"annotations":[85003,85004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009737"},{"annotations":[84757,84758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"},{"annotations":[85363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009744"},{"annotations":[85373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"},{"annotations":[86447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[85731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[85724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[84893,84890,84894,84892,84891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011449"},{"annotations":[85120,85121,85122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019148"}]},"cv_name":"mondo","definition":"A metabolic disorder caused by mutations in proteins critical for lysosomal function, including lysosomal enzymes, lysosomal integral membrane proteins, and proteins involved in the post-translational modification and trafficking of lysosomal proteins.","definition_xrefs":["PMID:21723623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00570":null,"SJAG_01407":null,"SJAG_01868":null,"SJAG_02056":null,"SJAG_02068":null,"SJAG_02131":null,"SJAG_02139":null,"SJAG_02518":null,"SJAG_02716":null,"SJAG_02949":null,"SJAG_03052":null,"SJAG_03824":null,"SJAG_04295":null,"SJAG_04323":null,"SJAG_04706":null,"SJAG_04790":null,"SJAG_04819":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"lysosomal storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:656131403","GARD:18884","Orphanet:68366","NANDO:2100165","SCTID:23585005","DOID:3211","MEDGEN:43098","MESH:D016464","NCIT:C61250","SCTID:28821000119102","UMLS:C0085078","NANDO:1200055"],"synonyms":[{"name":"disorder of lysosomal enzyme","type":"exact"},{"name":"disorder of lysosomal enzymes","type":"exact"},{"name":"inborn lysosomal enzyme disorder","type":"exact"},{"name":"lysosomal disease","type":"exact"},{"name":"lysosomal disorder","type":"exact"},{"name":"lysosomal storage disorder","type":"exact"},{"name":"lysosomal storage metabolism disorder","type":"exact"},{"name":"lysosome disease","type":"exact"},{"name":"lysosome disorder","type":"exact"},{"name":"phospholipidosis","type":"related"}],"termid":"MONDO:0002561","terms_by_termid":{"MONDO:0008083":null,"MONDO:0008767":null,"MONDO:0009290":null,"MONDO:0009737":null,"MONDO:0009744":null,"MONDO:0009756":null,"MONDO:0010027":null,"MONDO:0010155":null,"MONDO:0010526":null,"MONDO:0011449":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0012221":null,"MONDO:0012222":null,"MONDO:0019148":null,"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0002561"}}}


id: PBO:0058587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6720","termid":"PBO:0058587"}


id: PBO:0065522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 2 pseudogene 2","termid":"PBO:0065522"}


id: MONDO:0957113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic calcium channel defect","secondary_identifiers":["Orphanet:98740","GARD:19565","MEDGEN:1842522","UMLS:C5681686"],"termid":"MONDO:0957113","xrefs":{"Monarch":{"xref_id":"0957113"}}}


id: GO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any endonucleolytic cleavage involved in the conversion of a primary ribosomal RNA (rRNA) transcript into a mature rRNA molecule. Some endonucleolytic cleavages produce the mature end, while others are a step in the process of generating the mature end from the pre-rRNA.","definition_xrefs":["GOC:krc","PMID:10690410"],"gene_count":0,"genotype_count":0,"name":"obsolete endonucleolytic cleavage involved in rRNA processing (obsolete GO:0000478)","synonyms":[{"name":"endonucleolytic cleavage during rRNA processing","type":"related"}],"termid":"GO:0000478"}


id: FYPO:0005730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arginase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal arginase activity","termid":"FYPO:0005730"}


id: GO:0015740
data:
  {"annotated_genes":["SJAG_02011","SJAG_00522","SJAG_02140","SJAG_01406","SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[101145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"},{"annotations":[117890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071423"},{"annotations":[94526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015743"},{"annotations":[87928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990555"},{"annotations":[64185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902356"},{"annotations":[101147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"}]},"cv_name":"biological_process","definition":"The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02011":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"C4-dicarboxylate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015740","terms_by_termid":{"GO:0015743":null,"GO:0070778":null,"GO:0071423":null,"GO:0098714":null,"GO:0098720":null,"GO:1902356":null,"GO:1990555":null}}


id: MONDO:0013447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the GUCA1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 48","secondary_identifiers":["GARD:15720","DOID:0110382","UMLS:C3151190","OMIM:613827","ICD10CM:H35.5","MEDGEN:462540"],"synonyms":[{"name":"GUCA1B retinitis pigmentosa","type":"exact"},{"name":"RP48","type":"exact"},{"name":"retinitis pigmentosa 48","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in GUCA1B","type":"exact"},{"name":"retinitis pigmentosa type 48","type":"exact"}],"termid":"MONDO:0013447","xrefs":{"Monarch":{"xref_id":"0013447"}}}


id: MONDO:0859151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromuscular dysplasia, multifocal","secondary_identifiers":["OMIM:619329","UMLS:C5543412","MEDGEN:1778238"],"termid":"MONDO:0859151","xrefs":{"Monarch":{"xref_id":"0859151"}}}


id: FYPO:0003451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abolished during anaphase of the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to nucleus during meiotic anaphase II","synonyms":[{"name":"abolished protein localisation to nucleus during meiotic anaphase II","type":"exact"},{"name":"abolished protein localization to nucleus during anaphase II","type":"exact"},{"name":"nuclear exclusion during meiotic anaphase II","type":"related"},{"name":"nuclear protein exclusion during meiotic anaphase II","type":"related"},{"name":"protein localization to nucleus abolished during meiotic anaphase II","type":"exact"}],"termid":"FYPO:0003451"}


id: GO:1900418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of purine nucleotide biosynthetic process.","definition_xrefs":["GOC:curators","PMID:17573544","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900418)","synonyms":[{"name":"activation of purine nucleotide anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of purine nucleotide biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of purine nucleotide formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of purine nucleotide synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of purine nucleotide anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of purine nucleotide biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of purine nucleotide formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of purine nucleotide synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of purine nucleotide anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of purine nucleotide biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of purine nucleotide formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of purine nucleotide synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of purine nucleotide anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of purine nucleotide biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of purine nucleotide formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of purine nucleotide synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of purine nucleotide anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of purine nucleotide biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of purine nucleotide formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of purine nucleotide synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900418"}


id: PBO:0109654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3117","termid":"PBO:0109654"}


id: GO:0097192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with withdrawal of a ligand from a cell surface receptor, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["PMID:15044679","GOC:mtg_apoptosis","PMID:20816705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction in absence of ligand","termid":"GO:0038034"},{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extrinsic apoptotic signaling pathway in absence of ligand","secondary_identifiers":["Reactome:R-HSA-418889"],"synonyms":[{"name":"dependence receptor signaling pathway","type":"related"},{"name":"extrinsic apoptosis in absence of ligand","type":"narrow"},{"name":"extrinsic apoptotic signalling pathway in absence of ligand","type":"exact"}],"termid":"GO:0097192"}


id: GO:0046587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium-dependent cell-cell adhesion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of calcium-dependent cell-cell adhesion","termid":"GO:0046586"},{"relation_name":"positively_regulates","term_name":"calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules","termid":"GO:0016339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium-dependent cell-cell adhesion","synonyms":[{"name":"activation of calcium-dependent cell-cell adhesion","type":"narrow"},{"name":"stimulation of calcium-dependent cell-cell adhesion","type":"narrow"},{"name":"up regulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"up-regulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"upregulation of calcium-dependent cell-cell adhesion","type":"exact"}],"termid":"GO:0046587"}


id: MOD:01930
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to D-aspartic acid.","definition_xrefs":["RESID:AA0190#ASN","ChEBI:48094","PubMed:9384562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"},{"relation_name":"is_a","term_name":"D-aspartic acid","termid":"MOD:01942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartic acid (Asn)","synonyms":[{"name":"(2R)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"D-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:01930"}


id: RO:0002340
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is a transportation or localization process and the outcome of this process is to move c to a destination that is part of some s, where the start location of c is part of the region that surrounds s.","direct_ancestors":[{"relation_name":"is_a","term_name":"transports","termid":"RO:0002020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imports","termid":"RO:0002340"}


id: GO:0090185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:yaf","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"negatively_regulates","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of kidney development","synonyms":[{"name":"negative regulation of nephrogenesis","type":"related"}],"termid":"GO:0090185"}


id: GO:0061769
data:
  {"annotated_genes":["SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112538],"is_not":false,"summary":null,"term":"GO:0061769"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-ribosylnicotinate + ATP = ADP + 2 H+ + nicotinate mononucleotide.","definition_xrefs":["GOC:dph","PMID:17914902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ribosylnicotinate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8869607","Reactome:R-HSA-8869606"],"termid":"GO:0061769","terms_by_termid":{"GO:0061769":null}}


id: MOD:00303
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts seven L-histidinine residues and a four-copper one-sulfur one-hydroxide cluster to heptakis-L-histidino tetracopper mu4-sulfide hydroxide.","definition_xrefs":["PubMed:11041839","RESID:AA0298","PubMed:11024061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heptakis-L-histidino tetracopper mu4-sulfide hydroxide","synonyms":[{"name":"heptakis-L-histidino tetracopper mu4-sulfide hydroxide","type":"exact"},{"name":"mu4-sulfido bis(bis-N1'-histidino copper)(N1'-histidino-N3'-histidino copper)(N3'-histidino hydroxide copper)","type":"exact"},{"name":"nitrous oxide reductase nosZ CuZ cluster","type":"exact"},{"name":"pentakis-L-N1'-histidino-bis-L-N3'-histidino tetracopper sulfide hydroxide","type":"exact"}],"termid":"MOD:00303"}


id: PBO:0081980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5B","termid":"PBO:0081980"}


id: GO:0061779
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Subunit of the MHC class I peptide loading complex (GO:0042824) (=PLC) involved in the assembly of the heavy-chain-beta2-microglobulin dimers of the MHC class I molecules that fold with eight to ten residue peptides in the endoplasmic reticulum. Required for the inhibition of the reduction of the disulfide bonds of the heavy chains and the assembly and stabilization of the PLC, suggesting it may play a structural rather than a catalytic role.","definition_xrefs":["PMID:17603487","Intact:EBI-11896237","GOC:dph","Intact:EBI-9013963","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"MHC class I peptide loading complex","termid":"GO:0042824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005789","GO:0032991","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"Tapasin-ERp57 complex","termid":"GO:0061779"}


id: GO:1904752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell migration.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:20693317","GOC:rph","GOC:BHF_miRNA","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell migration","termid":"GO:0014910"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell migration","termid":"GO:1904738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell migration","synonyms":[{"name":"regulation of vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904752"}


id: PBO:0083404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YBR126W-A; identified by SAGE","termid":"PBO:0083404"}


id: GO:1904680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a peptide from one side of a membrane to the other.","definition_xrefs":["GO_REF:0000070","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"peptide transmembrane transporter activity","secondary_identifiers":["GO:0015197","Reactome:R-HSA-1500817","GO:0015637"],"synonyms":[{"name":"peptide transporter activity","type":"related"},{"name":"peptide uptake permease activity","type":"related"}],"termid":"GO:1904680"}


id: GO:1900345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from methanethiol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from methanethiol","termid":"GO:2001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006790","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from methanethiol","termid":"GO:1900345"}


id: PBO:0003552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 3'-tRNA processing endonuclease Trz2","termid":"PBO:0003552"}


id: PBO:0086222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap190p; SAP185 has a paralog, SAP190, that arose from the whole genome duplication","termid":"PBO:0086222"}


id: GO:0017007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of bilin and a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-tetrapyrrole linkage","termid":"GO:0017006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-bilin linkage","termid":"GO:0017007"}


id: PBO:0031412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tapered_cell","termid":"PBO:0031412"}


id: FYPO:0003214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to glucose starvation","synonyms":[{"name":"normal protein phosphorylation during cellular response to glucose depletion","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose deprivation","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose limitation","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0003214"}


id: GO:1904829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aortic smooth muscle cell differentiation.","definition_xrefs":["GOC:rph","GO_REF:0000058","GOC:BHF_miRNA","PMID:22034194","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905063"},{"relation_name":"regulates","term_name":"aortic smooth muscle cell differentiation","termid":"GO:0035887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aortic smooth muscle cell differentiation","termid":"GO:1904829"}


id: GO:0043938
data:
  {"annotated_genes":["SJAG_04853","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90243],"is_not":false,"summary":null,"term":"GO:0043938"},{"annotations":[101779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation","termid":"GO:0043937"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"sporulation","termid":"GO:0043934"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporulation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043938","terms_by_termid":{"GO:0043938":null,"GO:0075296":null,"GO:1903024":null}}


id: GO:1900822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ergot alkaloid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"ergot alkaloid biosynthetic process","termid":"GO:0035837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of ergot alkaloid biosynthetic process","synonyms":[{"name":"regulation of ergot alkaloid anabolism","type":"exact"},{"name":"regulation of ergot alkaloid biosynthesis","type":"exact"},{"name":"regulation of ergot alkaloid formation","type":"exact"},{"name":"regulation of ergot alkaloid synthesis","type":"exact"}],"termid":"GO:1900822"}


id: GO:0018893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dibenzofuran, a substance composed of two benzene rings linked by one ether bond and one carbon-carbon bond. Dibenzofuran is a white crystalline solid created from the production of coal tar and used as an insecticide and an intermediate in the production of other chemicals.","definition_xrefs":["UM-BBD_pathwayID:dbf","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dibenzofuran metabolic process","synonyms":[{"name":"dibenzofuran metabolism","type":"exact"}],"termid":"GO:0018893"}


id: PBO:0043578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 2 chain","termid":"PBO:0043578"}


id: MONDO:0859567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome","termid":"MONDO:0031329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome 2","secondary_identifiers":["DOID:0081125","OMIM:616994","UMLS:C5676895","MEDGEN:1803802"],"termid":"MONDO:0859567","xrefs":{"Monarch":{"xref_id":"0859567"}}}


id: MONDO:0013958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete monocyte and dendritic cell deficiency, autosomal recessive (obsolete MONDO:0013958)","termid":"MONDO:0013958","xrefs":{"Monarch":{"xref_id":"0013958"}}}


id: PBO:0039269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDOA pseudogene 2","termid":"PBO:0039269"}


id: GO:0021977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the superior colliculus of the midbrain towards target cells in the ventral spinal cord.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tectospinal tract morphogenesis","termid":"GO:0021977"}


id: GO:0033762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucagon stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glucagon","synonyms":[{"name":"response to glucagon stimulus","type":"exact"}],"termid":"GO:0033762"}


id: PBO:0002408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family A22","termid":"PBO:0002408"}


id: PBO:0002815
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cardiomyopathy","termid":"PBO:0002815"}


id: GO:0071429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains small nuclear RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071429)","synonyms":[{"name":"snRNA-containing RNP export from nucleus","type":"exact"},{"name":"snRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"snRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"snRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071429"}


id: PBO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain protein","termid":"PBO:0001573"}


id: PBO:0064401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase","termid":"PBO:0064401"}


id: SO:0000814
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a region's ability, when introduced to a mutant organism, to re-establish (rescue) a phenotype.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rescue","termid":"SO:0000814"}


id: PBO:0041242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 115","termid":"PBO:0041242"}


id: PR:Q9USH7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psy1 gene.","definition_xrefs":["UniProtKB:Q9USH7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin-like protein psy1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.03c","synonyms":[{"name":"Spom972h-psy1","type":"exact"}],"termid":"PR:Q9USH7"}


id: MONDO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal accumulation of cerebrospinal fluid within the ventricles of the brain that occurs as a consequence of impaired cerebrospinal fluid reabsorption by the arachnoid granulations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus","termid":"MONDO:0001150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"communicating hydrocephalus","secondary_identifiers":["UMLS:C0009451","MEDGEN:1058","NCIT:C34501","ICD10CM:G91.0","SCTID:271569006","icd11.foundation:186577228","DOID:1573","ICD9:331.3"],"synonyms":[{"name":"non-obstructive hydrocephalus","type":"exact"}],"termid":"MONDO:0002045","xrefs":{"Monarch":{"xref_id":"0002045"}}}


id: PBO:0004726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr1","termid":"PBO:0004726"}


id: PBO:0056815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 8","termid":"PBO:0056815"}


id: GO:1903084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a condensed nuclear chromosome.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","GOC:kmv","PMID:12707312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"},{"relation_name":"is_a","term_name":"protein localization to condensed chromosome","termid":"GO:1903083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to condensed nuclear chromosome","synonyms":[{"name":"protein localisation in condensed nuclear chromosome","type":"exact"},{"name":"protein localisation to condensed nuclear chromosome","type":"exact"},{"name":"protein localization in condensed nuclear chromosome","type":"exact"}],"termid":"GO:1903084"}


id: PBO:0068075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 380","termid":"PBO:0068075"}


id: PBO:0088644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export chaperone","termid":"PBO:0088644"}


id: GO:0060269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell migration process in which a follicle cell migrates as part of an epithelial sheet between the nurse cells and the oocyte. At the end of migration, they cover the anterior of the oocyte.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicle cell of egg chamber migration","termid":"GO:0007297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"centripetally migrating follicle cell migration","termid":"GO:0060269"}


id: GO:0009490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A mononuclear iron entity that serves as an electron acceptor and electron donor in an electron transport system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mononuclear iron electron carrier (obsolete GO:0009490)","synonyms":[{"name":"mononuclear iron electron carrier","type":"exact"}],"termid":"GO:0009490"}


id: GO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with low affinity with an immunoglobulin of an IgM isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM receptor activity","termid":"GO:0001793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"low-affinity IgM receptor activity","synonyms":[{"name":"low affinity IgM receptor activity","type":"exact"}],"termid":"GO:0002173"}


id: PBO:0029316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_mating_type_locus","termid":"PBO:0029316"}


id: PBO:0048060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 9","termid":"PBO:0048060"}


id: GO:0005905
data:
  {"annotated_genes":["SJAG_02282","SJAG_04609","SJAG_01748","SJAG_04565","SJAG_00800","SJAG_01167","SJAG_02805","SJAG_04517","SJAG_00104"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94396,105487,111104,112225,112349,112442],"is_not":false,"summary":null,"term":"GO:0005905"},{"annotations":[111100,95767,107790,111041],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A part of the endomembrane system in the form of an invagination of a membrane upon which a clathrin coat forms, and that can be converted by vesicle budding into a clathrin-coated vesicle. Coated pits form on the plasma membrane, where they are involved in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane, in the trans-Golgi network, and on some endosomes.","definition_xrefs":["GOC:mah","NIF_Subcellular:sao1969557946","PMID:10559856","PMID:17284835","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01748":null,"SJAG_02282":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"clathrin-coated pit","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"coated pit","type":"exact"}],"termid":"GO:0005905","terms_by_termid":{"GO:0005905":null,"GO:0030122":null}}


id: GO:0106385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces a dIMP from derivatives of it, without de novo synthesis.","definition_xrefs":["PMID:8692979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide salvage","termid":"GO:0106381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dIMP salvage","termid":"GO:0106385"}


id: MONDO:0003689
data:
  {"annotated_genes":["SJAG_04731","SJAG_04334","SJAG_02297","SJAG_00839","SJAG_01162","SJAG_02009","SJAG_03497","SJAG_02539","SJAG_04495","SJAG_02796","SJAG_00605","SJAG_01183","SJAG_03153","SJAG_01077","SJAG_05283","SJAG_04192","SJAG_00930"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[84985,84986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009134"},{"annotations":[85029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007109"},{"annotations":[85922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008494"},{"annotations":[84990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[84831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012204"},{"annotations":[85209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[86597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[85713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[85000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012981"},{"annotations":[85996,85995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[85934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008493"},{"annotations":[84979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"},{"annotations":[85130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[84731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012700"},{"annotations":[86726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019107"},{"annotations":[85171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008165"},{"annotations":[85322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"A congenital hemolytic anemia caused by defects of the erythrocyte membrane, enzyme deficiencies, or hemoglobinopathies.","definition_xrefs":["NCIT:C34379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_00930":null,"SJAG_01077":null,"SJAG_01162":null,"SJAG_01183":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02539":null,"SJAG_02796":null,"SJAG_03153":null,"SJAG_03497":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04731":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"familial hemolytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:589","ICD9:282","MEDGEN:1919","MESH:D000745","UMLS:C0002881","NANDO:2100183","ICD9:282.9","GARD:6167","SCTID:42601008"],"synonyms":[{"name":"anaemia hemolytic congenital","type":"related"},{"name":"anemia hemolytic congenital","type":"related"},{"name":"congenital hemolytic anaemia","type":"exact"},{"name":"congenital hemolytic anemia","type":"exact"},{"name":"hereditary hemolytic anaemia","type":"exact"},{"name":"hereditary hemolytic anemia","type":"exact"}],"termid":"MONDO:0003689","terms_by_termid":{"MONDO:0007109":null,"MONDO:0008165":null,"MONDO:0008493":null,"MONDO:0008494":null,"MONDO:0009113":null,"MONDO:0009134":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0012204":null,"MONDO:0012700":null,"MONDO:0012981":null,"MONDO:0012992":null,"MONDO:0013275":null,"MONDO:0014221":null,"MONDO:0019107":null,"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0003689"}}}


id: FYPO:0004315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"},{"relation_name":"output_of","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule cytoskeleton physical object quality during vegetative growth","type":"exact"},{"name":"disorganized microtubule cytoskeleton during vegetative growth","type":"related"}],"termid":"FYPO:0004315"}


id: GO:0052860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2'-deoxymugineic acid + 2-oxoglutarate + O2 = 3-epihydroxy-2'-deoxymugineic acid + succinate + CO2.","definition_xrefs":["EC:1.14.11.25"],"gene_count":0,"genotype_count":0,"name":"obsolete 2'-deoxymugineic-acid 3-dioxygenase activity (obsolete GO:0052860)","termid":"GO:0052860"}


id: MONDO:0012301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myopathic mitochondrial DNA (mtDNA) depletion syndrome is one of the main forms of mtDNA depletion syndrome that displays a broad phenotypic spectrum but that is most often characterized by hypotonia, proximal muscle weakness, facial and bulbar weakness and failure to thrive.","definition_xrefs":["Orphanet:254875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"},{"relation_name":"is_a","term_name":"inborn disorder of pyrimidine metabolism","termid":"MONDO:0019238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome, myopathic form","secondary_identifiers":["SCTID:703527003","OMIM:609560","UMLS:C3149750","GARD:17228","icd11.foundation:294556832","MESH:C563698","MEDGEN:461100","DOID:0080120","ICD9:359.89"],"synonyms":[{"name":"MTDPS2","type":"related"},{"name":"mitochondrial DNA depletion myopathy, Tk2-related","type":"related"},{"name":"mitochondrial DNA depletion syndrome 2","type":"related"},{"name":"mitochondrial DNA depletion syndrome 2 (myopathic type)","type":"related"},{"name":"mitochondrial DNA depletion syndrome type 2","type":"exact"},{"name":"mtDNA depletion syndrome, myopathic form","type":"exact"}],"termid":"MONDO:0012301","xrefs":{"Monarch":{"xref_id":"0012301"}}}


id: GO:1902082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["PMID:8349590","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"},{"relation_name":"positively_regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion import into sarcoplasmic reticulum","synonyms":[{"name":"activation of calcium ion import into sarcoplasmic reticulum","type":"narrow"},{"name":"up regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"up-regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"upregulation of calcium ion import into sarcoplasmic reticulum","type":"exact"}],"termid":"GO:1902082"}


id: FYPO:0001455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to water deprivation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"},{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular response to water deprivation","synonyms":[{"name":"normal cellular response to dehydration","type":"exact"},{"name":"normal cellular response to water deprivation during mitotic cell cycle","type":"related"},{"name":"normal cellular response to water deprivation during vegetative growth","type":"exact"}],"termid":"FYPO:0001455"}


id: PBO:0017470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends_after","termid":"PBO:0017470"}


id: MONDO:0005269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the carotid artery segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carotid artery disorder","secondary_identifiers":["UMLS:C0007273","DOID:3407","MEDGEN:2892","SCTID:371160000","ICD9:447.9","NCIT:C84476","EFO:0003781","MESH:D002340"],"synonyms":[{"name":"carotid artery disorder","type":"exact"},{"name":"carotid artery segment disease","type":"exact"},{"name":"carotid artery segment disease or disorder","type":"exact"},{"name":"disease of carotid artery segment","type":"exact"},{"name":"disease or disorder of carotid artery segment","type":"exact"},{"name":"disorder of carotid artery","type":"exact"},{"name":"disorder of carotid artery segment","type":"exact"}],"termid":"MONDO:0005269","xrefs":{"Monarch":{"xref_id":"0005269"}}}


id: MONDO:0021157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cervicitis","termid":"MONDO:0002345"},{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal cervicitis","secondary_identifiers":["icd11.foundation:1706835456","MEDGEN:678343","UMLS:C0812378","SCTID:237083000"],"synonyms":[{"name":"gonorrhea of cervix","type":"exact"},{"name":"gonorrhea of uterine cervix","type":"exact"},{"name":"gonorrhoea of cervix","type":"exact"},{"name":"gonorrhoea of uterine cervix","type":"exact"}],"termid":"MONDO:0021157","xrefs":{"Monarch":{"xref_id":"0021157"}}}


id: MONDO:0007813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Superficial epidermolytic ichthyosis (SEI) is a rare keratinopathic ichthyosis (KI) characterized by the presence of superficial blisters and erosions at birth.","definition_xrefs":["Orphanet:455"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ichthyosis","termid":"MONDO:0019269"},{"relation_name":"is_a","term_name":"keratinopathic ichthyosis","termid":"MONDO:0017266"},{"relation_name":"is_a","term_name":"exfoliative ichthyosis","termid":"MONDO:0017339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"superficial epidermolytic ichthyosis","secondary_identifiers":["GARD:2966","NANDO:2200990","SCTID:254169002","OMIM:146800","icd11.foundation:842172475","NANDO:1200613","DOID:0060877","MESH:D053560","UMLS:C0432306","NCIT:C84777","MEDGEN:98153"],"synonyms":[{"name":"IBS","type":"related"},{"name":"SEI","type":"exact"},{"name":"bullous type ichthyosis","type":"exact"},{"name":"bullous type of ichthyosis","type":"related"},{"name":"ichthyosis bullosa of Siemens","type":"exact"},{"name":"ichthyosis exfoliativa","type":"related"},{"name":"ichthyosis, bullous type","type":"related"},{"name":"superficial epidermolytic ichthyosis","type":"exact"}],"termid":"MONDO:0007813","xrefs":{"Monarch":{"xref_id":"0007813"}}}


id: GO:0016361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with activin-bound type II activin receptor to initiate a change in cell activity; upon binding, acts as a downstream transducer of activin signals.","definition_xrefs":["PMID:8622651","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin receptor activity","termid":"GO:0017002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016740","GO:0016301","GO:0038023","GO:0004672"],"is_obsolete":false,"name":"activin receptor activity, type I","synonyms":[{"name":"type I activin receptor activity","type":"exact"}],"termid":"GO:0016361"}


id: PBO:0091001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 regulatory subunit","termid":"PBO:0091001"}


id: GO:0031551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of brain-derived neurotrophic factor-activated receptor activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of brain-derived neurotrophic factor-activated receptor activity (obsolete GO:0031551)","synonyms":[{"name":"regulation of BDNF receptor activity","type":"exact"},{"name":"regulation of brain-derived neurotrophic factor receptor activity","type":"exact"}],"termid":"GO:0031551"}


id: MONDO:1012031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital blindness, non-human animal","termid":"MONDO:1011975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital blindness, pig","secondary_identifiers":["OMIA:000115-9823"],"termid":"MONDO:1012031","xrefs":{"Monarch":{"xref_id":"1012031"}}}


id: MONDO:0019125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, clinically heterogeneous, multisystemic inflammatory disease characterized by inflammation of the cartilage and proteoglycan rich structures leading to cartilage damage with joint, ocular and cardiovascular involvement.","definition_xrefs":["Orphanet:728"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"chondromalacia","termid":"MONDO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relapsing polychondritis","secondary_identifiers":["MedDRA:10038304","NANDO:1200283","NANDO:2100154","EFO:1001148","NORD:1655","icd11.foundation:1412888287","MEDGEN:45995","MESH:D011081","GARD:7417","NCIT:C157268","ICD10CM:M94.1","DOID:2556","SCTID:72275000","ICD9:733.99","NANDO:2200428","UMLS:C0032453"],"synonyms":[{"name":"chondromalacia, systemic","type":"exact"},{"name":"chronic atrophic polychondritis","type":"related"},{"name":"recurrent polychondritis","type":"related"}],"termid":"MONDO:0019125","xrefs":{"Monarch":{"xref_id":"0019125"}}}


id: PBO:0057455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 574","termid":"PBO:0057455"}


id: CHEBI:52651
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin","termid":"CHEBI:52651"}


id: PBO:0077222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane BAX inhibitor motif containing 6","termid":"PBO:0077222"}


id: GO:0150129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-33 production.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-33 production","termid":"GO:0150127"},{"relation_name":"positively_regulates","term_name":"interleukin-33 production","termid":"GO:0072639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-33 production","secondary_identifiers":["GO:0150132","GO:0150125"],"synonyms":[{"name":"positive regulation of interleukin-33 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-33 secretion","type":"narrow"}],"termid":"GO:0150129"}


id: GO:0018864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetylene, formula CH2CH2, the simplest of the alkynes.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"alkyne metabolic process","termid":"GO:0043452"},{"relation_name":"is_a","term_name":"terminal acetylenic compound metabolic process","termid":"GO:0120244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:atl"],"synonyms":[{"name":"acetylene metabolism","type":"exact"},{"name":"ethyne metabolic process","type":"exact"},{"name":"ethyne metabolism","type":"exact"}],"termid":"GO:0018864"}


id: MONDO:0004990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Subsets of breast carcinoma defined by expression of genes characteristic of luminal epithelial cells.","definition_xrefs":["NCIT:C53554","NCIT:C53555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast tumor luminal A or B","secondary_identifiers":["DOID:0060548","EFO:0000306"],"synonyms":[{"name":"breast tumor luminal","type":"exact"},{"name":"breast tumour luminal","type":"exact"},{"name":"luminal breast cancer","type":"exact"},{"name":"luminal breast carcinoma","type":"related"}],"termid":"MONDO:0004990","xrefs":{"Monarch":{"xref_id":"0004990"}}}


id: SO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The ends of a DNA loop where the two strands of DNA are held in close physical proximity. During interphase the anchors of DNA loops are convergently oriented CTCF binding sites.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"},{"relation_name":"part_of","term_name":"DNA_loop","termid":"SO:0002307"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_loop_anchor","synonyms":[{"name":"DNA loop anchor","type":"exact"}],"termid":"SO:0002308"}


id: PBO:0061542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSUN5 pseudogene 2","termid":"PBO:0061542"}


id: PBO:0089243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated WD repeat protein Nan1/Utp17","termid":"PBO:0089243"}


id: PBO:0111791
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APSES domain","termid":"PBO:0111791"}


id: MONDO:0003789
data:
  {"annotated_genes":["SJAG_01144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85688],"is_not":false,"summary":null,"term":"MONDO:0003789"}]},"cv_name":"mondo","definition":"A familial carcinoma inherited in an autosomal dominant trait. It is characterized by the development of multiple, bilateral papillary renal cell carcinomas. The carcinomas range from microscopic lesions to clinically symptomatic tumors. It is associated with activating mutations of the MET oncogene.","definition_xrefs":["NCIT:C9222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal cell carcinoma","termid":"MONDO:0003008"},{"relation_name":"is_a","term_name":"papillary renal cell carcinoma","termid":"MONDO:0017884"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01144":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"hereditary papillary renal cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:715561008","GARD:13157","Orphanet:47044","MEDGEN:163907","UMLS:C0879257","DOID:6163","OMIM:605074"],"synonyms":[{"name":"familial renal papillary carcinoma","type":"exact"},{"name":"hereditary kidney papillary carcinoma","type":"exact"},{"name":"hereditary papillary carcinoma of kidney","type":"exact"},{"name":"hereditary papillary carcinoma of the kidney","type":"exact"},{"name":"hereditary papillary renal carcinoma","type":"exact"},{"name":"hereditary papillary renal cell cancer","type":"exact"},{"name":"hereditary papillary renal cell carcinoma","type":"exact"},{"name":"renal cell carcinoma, papillary","type":"exact"},{"name":"renal cell carcinoma, papillary, 1, familial and somatic","type":"exact"}],"termid":"MONDO:0003789","terms_by_termid":{"MONDO:0003789":null},"xrefs":{"Monarch":{"xref_id":"0003789"}}}


id: GO:0050392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-vicianin + H2O = mandelonitrile + vicianose.","definition_xrefs":["EC:3.2.1.119","RHEA:14041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"vicianin beta-glucosidase activity","secondary_identifiers":["KEGG_REACTION:R03642","MetaCyc:VICIANIN-BETA-GLUCOSIDASE-RXN"],"synonyms":[{"name":"(R)-vicianin beta-D-glucohydrolase activity","type":"related"},{"name":"vicianin b-glucosidase activity","type":"exact"},{"name":"vicianin hydrolase activity","type":"related"}],"termid":"GO:0050392"}


id: PBO:0046744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 3","termid":"PBO:0046744"}


id: MONDO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unusually early sexual maturity.","definition_xrefs":["NCIT:C79704"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare endocrine growth disease (obsolete MONDO:0019590)","termid":"MONDO:0019590"},{"relation_name":"is_a","term_name":"gonadal disorder","termid":"MONDO:0002259"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precocious puberty","secondary_identifiers":["MedDRA:10044701","SCTID:400179000","UMLS:C0034013","MEDGEN:18752","HP:0000826","MESH:D011629","Orphanet:95708","MedDRA:10058084","NANDO:2100135","ICD9:259.1","ICD10CM:E30.1"],"synonyms":[{"name":"familial precocious puberty","type":"narrow"},{"name":"idiopathic sexual precocity","type":"narrow"},{"name":"pubertas praecox","type":"exact"},{"name":"sexual precocity","type":"exact"}],"termid":"MONDO:0000088","xrefs":{"Monarch":{"xref_id":"0000088"}}}


id: PATO:0001134
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001134 ig a concentration (obsolete PATO:0001134)","termid":"PATO:0001134"}


id: GO:0015447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type II protein secretor activity (obsolete GO:0015447)","synonyms":[{"name":"type II protein secretor activity","type":"exact"}],"termid":"GO:0015447"}


id: SO:0000781
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute describing sequence that has been integrated with foreign sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgenic","termid":"SO:0000781"}


id: PBO:0027295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_tetranucleate_vegetative_cell","termid":"PBO:0027295"}


id: PBO:0063728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHACTR2 antisense RNA 1","termid":"PBO:0063728"}


id: MONDO:0030781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"restrictive dermopathy","termid":"MONDO:0031213"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restrictive dermopathy 2","secondary_identifiers":["DOID:0070370","OMIM:619793","MEDGEN:1801155","UMLS:C5676942"],"synonyms":[{"name":"RSDM2","type":"exact"},{"name":"restrictive dermopathy 2","type":"exact"},{"name":"restrictive dermopathy 2, lethal","type":"exact"}],"termid":"MONDO:0030781","xrefs":{"Monarch":{"xref_id":"0030781"}}}


id: PBO:0077928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 1","termid":"PBO:0077928"}


id: PBO:0076074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20-related kinase adaptor beta pseudogene 1","termid":"PBO:0076074"}


id: PBO:0078226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-1 (pseudogene)","termid":"PBO:0078226"}


id: PBO:0049459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2","termid":"PBO:0049459"}


id: MONDO:0009289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease IC (obsolete MONDO:0009289)","termid":"MONDO:0009289","xrefs":{"Monarch":{"xref_id":"0009289"}}}


id: PATO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"movement behavioral quality","synonyms":[{"name":"movement behavioural quality","type":"exact"}],"termid":"PATO:0002076"}


id: GO:0140840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) cis-proline (omega=180) (position 6) = RNA polymerase II large subunit trans-proline (omega=0) (position 6).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat peptidyl-prolyl isomerase activity","termid":"GO:0140838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat P6 isomerase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain P6 isomerase activity","type":"exact"}],"termid":"GO:0140840"}


id: GO:0043547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a GTPase.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of GTPase activity","termid":"GO:0043087"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of GTPase activity","secondary_identifiers":["GO:0032320","GO:0032852","GO:0032850","GO:0032851","GO:0032321","GO:0032854","GO:0043089","GO:0032853","GO:0032855"],"synonyms":[{"name":"activation of GTPase activity","type":"narrow"},{"name":"positive regulation of ARF GTPase activity","type":"narrow"},{"name":"positive regulation of Cdc42 GTPase activity","type":"narrow"},{"name":"positive regulation of Rab GTPase activity","type":"narrow"},{"name":"positive regulation of Rac GTPase activity","type":"narrow"},{"name":"positive regulation of Ral GTPase activity","type":"narrow"},{"name":"positive regulation of Ran GTPase activity","type":"narrow"},{"name":"positive regulation of Rap GTPase activity","type":"narrow"},{"name":"positive regulation of Ras GTPase activity","type":"narrow"},{"name":"positive regulation of Rho GTPase activity","type":"narrow"},{"name":"stimulation of ARF GTPase activity","type":"narrow"},{"name":"stimulation of Cdc42 GTPase activity","type":"narrow"},{"name":"stimulation of GTPase activity","type":"narrow"},{"name":"stimulation of Rab GTPase activity","type":"narrow"},{"name":"stimulation of Rac GTPase activity","type":"narrow"},{"name":"stimulation of Ral GTPase activity","type":"narrow"},{"name":"stimulation of Ran GTPase activity","type":"narrow"},{"name":"stimulation of Rap GTPase activity","type":"narrow"},{"name":"stimulation of Ras GTPase activity","type":"narrow"},{"name":"stimulation of Rho GTPase activity","type":"narrow"},{"name":"up regulation of ARF GTPase activity","type":"narrow"},{"name":"up regulation of Cdc42 GTPase activity","type":"narrow"},{"name":"up regulation of GTPase activity","type":"exact"},{"name":"up regulation of Rab GTPase activity","type":"narrow"},{"name":"up regulation of Rac GTPase activity","type":"narrow"},{"name":"up regulation of Ral GTPase activity","type":"narrow"},{"name":"up regulation of Ran GTPase activity","type":"narrow"},{"name":"up regulation of Rap GTPase activity","type":"narrow"},{"name":"up regulation of Ras GTPase activity","type":"narrow"},{"name":"up regulation of Rho GTPase activity","type":"narrow"},{"name":"up-regulation of ARF GTPase activity","type":"narrow"},{"name":"up-regulation of Cdc42 GTPase activity","type":"narrow"},{"name":"up-regulation of GTPase activity","type":"exact"},{"name":"up-regulation of Rab GTPase activity","type":"narrow"},{"name":"up-regulation of Rac GTPase activity","type":"narrow"},{"name":"up-regulation of Ral GTPase activity","type":"narrow"},{"name":"up-regulation of Ran GTPase activity","type":"narrow"},{"name":"up-regulation of Rap GTPase activity","type":"narrow"},{"name":"up-regulation of Ras GTPase activity","type":"narrow"},{"name":"up-regulation of Rho GTPase activity","type":"narrow"},{"name":"upregulation of ARF GTPase activity","type":"narrow"},{"name":"upregulation of Cdc42 GTPase activity","type":"narrow"},{"name":"upregulation of GTPase activity","type":"exact"},{"name":"upregulation of Rab GTPase activity","type":"narrow"},{"name":"upregulation of Rac GTPase activity","type":"narrow"},{"name":"upregulation of Ral GTPase activity","type":"narrow"},{"name":"upregulation of Ran GTPase activity","type":"narrow"},{"name":"upregulation of Rap GTPase activity","type":"narrow"},{"name":"upregulation of Ras GTPase activity","type":"narrow"},{"name":"upregulation of Rho GTPase activity","type":"narrow"}],"termid":"GO:0043547"}


id: GO:0061550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cranial ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion development","termid":"GO:0061548"},{"relation_name":"part_of","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion development","synonyms":[{"name":"cranial ganglia development","type":"related"}],"termid":"GO:0061550"}


id: GO:0007494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the midgut over time, from its formation to the mature structure. The midgut is the middle part of the alimentary canal from the stomach, or entrance of the bile duct, to, or including, the large intestine.","definition_xrefs":["GOC:jid","UBERON:0001045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midgut development","termid":"GO:0007494"}


id: GO:0008239
data:
  {"annotated_genes":["SJAG_02565"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88650],"is_not":false,"summary":null,"term":"GO:0008239"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02565":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0140096","GO:0008233","GO:0003674"],"is_obsolete":false,"name":"dipeptidyl-peptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008239","terms_by_termid":{"GO:0008239":null}}


id: PBO:0069942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1235, pseudogene","termid":"PBO:0069942"}


id: PBO:0035948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_mating_type_locus_during_vegetative_growth","termid":"PBO:0035948"}


id: PBO:0057909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3612","termid":"PBO:0057909"}


id: MONDO:0015060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 3 is a rare chromosomal anomaly syndrome with high phenotypic variability ranging from a mild phenotype presenting joint pain and laxity, mild facial dysmorphism (e.g. long facies, prominent eyes, dysplastic ears, downturned corners of the mouth, micrognathia) and no developmental delays to more severe phenotypes including short stature, intellectual disability, severe developmental delays, additional craniofacial dysmorphic features (e.g. brachycephaly, high forehead, flat midface, short neck) and hearing impairment, as well as skeletal (e.g. pectus excavatum, scoliosis), ocular (e.g. coloboma) and cardiac abnormalities.","definition_xrefs":["Orphanet:100071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 3 disorder","termid":"MONDO:0700010"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 3","secondary_identifiers":["UMLS:C4707012","GARD:5342","MEDGEN:1646607","SCTID:764627005"],"synonyms":[{"name":"Mosaic trisomy chromosome 3","type":"exact"},{"name":"Mosaic trisomy type 3","type":"exact"},{"name":"trisomy 3 mosaicism","type":"exact"}],"termid":"MONDO:0015060","xrefs":{"Monarch":{"xref_id":"0015060"}}}


id: MONDO:1012583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ametopodia that occurs in chickens with dominant inheritance.","definition_xrefs":["PMID:6055328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"iatrogenic disease, non-human animal","termid":"MONDO:1011322"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ametapodia-1, chicken","secondary_identifiers":["OMIA:000035-9031"],"termid":"MONDO:1012583","xrefs":{"Monarch":{"xref_id":"1012583"}}}


id: MONDO:0016460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyvalvular heart disease syndrome is a recently described syndrome characterized by the combination of polyvalvular heart disease, short stature, facial anomalies and intellectual deficit.","definition_xrefs":["Orphanet:228410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"polyvalvular heart disease syndrome","secondary_identifiers":["UMLS:C4509918","MEDGEN:1376905","SCTID:723448007","GARD:20594"],"synonyms":[{"name":"PHD syndrome","type":"exact"}],"termid":"MONDO:0016460","xrefs":{"Monarch":{"xref_id":"0016460"}}}


id: GO:0046061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009217"},{"relation_name":"is_a","term_name":"dATP metabolic process","termid":"GO:0046060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dATP catabolic process","synonyms":[{"name":"dATP breakdown","type":"exact"},{"name":"dATP catabolism","type":"exact"},{"name":"dATP degradation","type":"exact"}],"termid":"GO:0046061"}


id: GO:0046333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving octopamine, 1-(p-hydroxyphenyl)-2-aminoethanol. The D enantiomer is about one-tenth as active as norepinephrine and is found in the salivary glands of Octopus and Eledone species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"ethanolamine-containing compound metabolic process","termid":"GO:0042439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"octopamine metabolic process","synonyms":[{"name":"octopamine metabolism","type":"exact"}],"termid":"GO:0046333"}


id: GO:0007221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of transcription of specific genes as a result of Notch signaling, mediated by the Notch intracellular domain.","definition_xrefs":["PMID:12651094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"part_of","term_name":"Notch signaling pathway","termid":"GO:0007219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription of Notch receptor target","secondary_identifiers":["Reactome:R-HSA-9013508"],"synonyms":[{"name":"N receptor target transcription factor activation","type":"related"},{"name":"Notch receptor target transcription factor activation","type":"related"}],"termid":"GO:0007221"}


id: PBO:0066339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 1","termid":"PBO:0066339"}


id: PBO:0055627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3066","termid":"PBO:0055627"}


id: MONDO:0022676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cataract - glaucoma (obsolete MONDO:0022676)","termid":"MONDO:0022676","xrefs":{"Monarch":{"xref_id":"0022676"}}}


id: PBO:0073878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC10A5 pseudogene 1","termid":"PBO:0073878"}


id: PR:Q9USK7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphopantothenate--cysteine ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04565","PANTHER:PTHR12290:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4B3.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.18","secondary_identifiers":["UniProtKB:Q9USK7"],"synonyms":[{"name":"Spom972h-PPCS","type":"exact"}],"termid":"PR:Q9USK7"}


id: PBO:0091865
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ring-type zinc finger protein","termid":"PBO:0091865"}


id: MONDO:0030335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrhea 12, with microvillus atrophy","secondary_identifiers":["MEDGEN:1794152","OMIM:619445","UMLS:C5561942"],"synonyms":[{"name":"DIAR12","type":"exact"},{"name":"diarrhea 12, with microvillus atrophy","type":"exact"},{"name":"microvillus inclusion disease 2","type":"exact"}],"termid":"MONDO:0030335","xrefs":{"Monarch":{"xref_id":"0030335"}}}


id: FYPO:0006593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of spindle microtubules from the spindle pole body (SPB) occurs to a lesser extent than normal.","definition_xrefs":["PMID:19942852","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic microtubule nucleation","termid":"FYPO:0006336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule nucleation from spindle pole body","synonyms":[{"name":"decreased microtubule nucleation from spindle pole body during mitotic cell cycle","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation by spindle pole body","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from SPB","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during mitotic M phase","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during vegetative growth","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic SPB","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic spindle pole body","type":"exact"},{"name":"reduced mitotic spindle microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0006593"}


id: PBO:0076948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor alpha","termid":"PBO:0076948"}


id: PBO:0070568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 34","termid":"PBO:0070568"}


id: GO:0004162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a methyl group from N-nitrosodimethylamine.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylnitrosamine demethylase activity (obsolete GO:0004162)","synonyms":[{"name":"N-nitrosodimethylamine demethylase activity","type":"exact"}],"termid":"GO:0004162"}


id: GO:1903969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to macrophage colony-stimulating factor.","definition_xrefs":["GOC:nc","PMID:19100238","GOC:TermGenie","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"response to macrophage colony-stimulating factor","termid":"GO:0036005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to macrophage colony-stimulating factor","synonyms":[{"name":"regulation of response to M-CSF","type":"exact"},{"name":"regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:1903969"}


id: PBO:0057948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-4","termid":"PBO:0057948"}


id: PBO:0068874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 114, pseudogene","termid":"PBO:0068874"}


id: GO:0141164
data:
  {"annotated_genes":["SJAG_04154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101580],"is_not":false,"summary":null,"term":"GO:0141164"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the mitochondrion, which are targeted for degradation.","definition_xrefs":["PMID:38280230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"mitochondrial protein quality control","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141164","terms_by_termid":{"GO:0141164":null}}


