# terms

id: PBO:0031216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Mre11_complex_assembly","termid":"PBO:0031216"}


id: PBO:0031331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_canavanine","termid":"PBO:0031331"}


id: PBO:0072135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 12","termid":"PBO:0072135"}


id: MOD:01518
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance groups.","definition_xrefs":["Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01518"}


id: GO:0004517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+.","definition_xrefs":["RHEA:19897","EC:1.14.13.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitric-oxide synthase activity","secondary_identifiers":["MetaCyc:NITRIC-OXIDE-SYNTHASE-RXN","Reactome:R-HSA-202127","Reactome:R-HSA-418436"],"synonyms":[{"name":"L-arginine,NADPH:oxygen oxidoreductase (nitric-oxide-forming) activity","type":"related"},{"name":"NADPH-diaphorase activity","type":"related"},{"name":"NO synthase activity","type":"related"},{"name":"endothelium-derived relaxation factor-forming enzyme activity","type":"related"},{"name":"endothelium-derived relaxing factor synthase activity","type":"related"},{"name":"nitric oxide synthase activity","type":"exact"},{"name":"nitric oxide synthetase activity","type":"related"},{"name":"nitric-oxide synthetase activity","type":"related"}],"termid":"GO:0004517"}


id: PBO:0080433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 17","termid":"PBO:0080433"}


id: PBO:0062039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 8","termid":"PBO:0062039"}


id: GO:0050379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate = UDP-L-iduronate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"UDP-glucuronate 5'-epimerase activity","secondary_identifiers":["KEGG_REACTION:R01387"],"synonyms":[{"name":"C-5-uronosyl epimerase activity","type":"related"},{"name":"UDP-glucuronate 5' epimerase activity","type":"exact"},{"name":"UDP-glucuronic acid 5'-epimerase activity","type":"related"},{"name":"UDP-glucuronic acid epimerase activity","type":"related"},{"name":"UDPglucuronate 5'-epimerase activity","type":"related"},{"name":"uridine diphosphoglucuronate 5'-epimerase activity","type":"related"}],"termid":"GO:0050379"}


id: GO:2000883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of starch catabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of starch catabolic process","termid":"GO:2000881"},{"relation_name":"is_a","term_name":"positive regulation of starch metabolic process","termid":"GO:2000906"},{"relation_name":"positively_regulates","term_name":"starch catabolic process","termid":"GO:0005983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of starch catabolic process","synonyms":[{"name":"positive regulation of starch breakdown","type":"exact"},{"name":"positive regulation of starch catabolism","type":"exact"},{"name":"positive regulation of starch degradation","type":"exact"}],"termid":"GO:2000883"}


id: MONDO:0014816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split-foot malformation-mesoaxial polydactyly syndrome","secondary_identifiers":["MEDGEN:1798910","GARD:17889","OMIM:616890","Orphanet:488232","UMLS:C5567487"],"synonyms":[{"name":"SFMMP","type":"exact"},{"name":"split-foot malformation with mesoaxial polydactyly","type":"exact"},{"name":"split-foot malformation-mesoaxial polydactyly-nail abnormalities-sensorineural hearing loss syndrome","type":"exact"}],"termid":"MONDO:0014816","xrefs":{"Monarch":{"xref_id":"0014816"}}}


id: GO:0001083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase II basal transcription factor binding (obsolete GO:0001083)","synonyms":[{"name":"RNA polymerase II basal transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0001083"}


id: PATO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape inhering in a bearer by virtue of the bearer's being elongated and cylindrical.","definition_xrefs":["PATOC:me"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"columnar","termid":"PATO:0002063"}


id: GO:0039662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid bilayer that forms the outermost layer of the cell envelope, occurring in a host cell.","definition_xrefs":["GOC:bf","GOC:ch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host outer membrane","termid":"GO:0044384"},{"relation_name":"part_of","term_name":"host cell envelope","termid":"GO:0044230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell outer membrane","synonyms":[{"name":"host cell envelope outer membrane","type":"exact"},{"name":"outer membrane of host cell","type":"exact"}],"termid":"GO:0039662"}


id: FYPO:0008060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to a ubiquitin monomer is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:16138082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000702"],"is_obsolete":false,"name":"normal mono ubiquitin binding","termid":"FYPO:0008060"}


id: MONDO:0020392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete discrete fixed membranous subaortic stenosis (obsolete MONDO:0020392)","secondary_identifiers":["Orphanet:99051"],"termid":"MONDO:0020392","xrefs":{"Monarch":{"xref_id":"0020392"}}}


id: MONDO:0008836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia with myoclonic epilepsy and presenile dementia","secondary_identifiers":["OMIM:208700","UMLS:C1859646","MEDGEN:347924","MESH:C565933"],"synonyms":[{"name":"ataxia with myoclonic epilepsy and presenile dementia","type":"exact"}],"termid":"MONDO:0008836","xrefs":{"Monarch":{"xref_id":"0008836"}}}


id: GO:0061533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of norepinephrine by a cell, in which the norepinephrine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine secretion","termid":"GO:0048243"},{"relation_name":"is_a","term_name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"norepinephrine secretion, neurotransmission","synonyms":[{"name":"noradrenaline secretion, neurotransmission","type":"exact"}],"termid":"GO:0061533"}


id: MONDO:0011893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 5q31.1-q32.","definition_xrefs":["DOID:0110578","PMID:18312703"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant nonsyndromic hearing loss 52 (obsolete MONDO:0011893)","secondary_identifiers":["MESH:C564348","GARD:18119","UMLS:C1843232","OMIM:607683","MEDGEN:334357"],"synonyms":[{"name":"DFNA52","type":"narrow"},{"name":"autosomal dominant deafness 52","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 52","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 52","type":"narrow"},{"name":"deafness, autosomal dominant 42","type":"narrow"},{"name":"deafness, autosomal dominant 52","type":"narrow"}],"termid":"MONDO:0011893","xrefs":{"Monarch":{"xref_id":"0011893"}}}


id: PBO:0043211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 4","termid":"PBO:0043211"}


id: MONDO:0003479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pneumonia that is an acute inflammation of the lungs induced by inhalation of metal fumes or toxic gasses and vapors. It is a sentinel health event (occupational) associated with exposure to ammonia (refrigeration, fertilizer, and oil refining industries), chlorine (alkali and bleach industries), nitrogen oxides (silo fillers, arc welders, and nitric acid industry), sulfur dioxide (paper, refrigeration, and oil refining industries), cadmium (processors and cadmium smelters), trimellitic anhydride (plastics and organic chemical synthesis), and vanadium pentoxide (boilermakers). The two types of pulmonary agents are central and peripheral. Central pulmonary agents, for example, ammonia, are water soluble irritants that injure the upper airways. Peripheral pulmonary agents, for example, phosgene, NOx, and PFIB, are slightly water soluble irritants that injure the alveolar-capillary membranes. Chlorine has both central and peripheral effects.","definition_xrefs":["DOID:551"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic pneumonitis","secondary_identifiers":["MEDGEN:811389","ICD9:506.9","UMLS:C3714582","SCTID:233733000"],"synonyms":[{"name":"acute chemical fume pulmonary edema","type":"exact"},{"name":"acute chemical fume pulmonary oedema","type":"exact"},{"name":"acute chemical pulmonary edema","type":"exact"},{"name":"acute chemical pulmonary oedema","type":"exact"}],"termid":"MONDO:0003479","xrefs":{"Monarch":{"xref_id":"0003479"}}}


id: MONDO:0005732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diphyllobothriasis (obsolete MONDO:0005732)","termid":"MONDO:0005732","xrefs":{"Monarch":{"xref_id":"0005732"}}}


id: MONDO:0859311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, demyelinating, type 1J","secondary_identifiers":["MEDGEN:1824022","UMLS:C5774249","OMIM:620111"],"termid":"MONDO:0859311","xrefs":{"Monarch":{"xref_id":"0859311"}}}


id: GO:0039648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont alters ubiquitin-like protein modification of target proteins of either host or symbiont proteins. This includes ubiquitination, SUMOylation, NEDDylation, and ISG15ylation. The ubiquitination status of a protein  affects whether it is targeted to the proteasome for degradation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:26712804","PMID:26483404","PMID:25166298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host ubiquitin-like protein modification","synonyms":[{"name":"modulation by symbiont of host protein ubiquitination","type":"exact"},{"name":"modulation of host ubiquitin pathway by virus","type":"narrow"},{"name":"symbiont-mediated perturbation of host protein SUMOlyation","type":"narrow"},{"name":"symbiont-mediated perturbation of host protein ubiquitination","type":"narrow"}],"termid":"GO:0039648"}


id: GO:0017155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:hydrogen antiporter regulator activity (obsolete GO:0017155)","synonyms":[{"name":"sodium:hydrogen antiporter regulator activity","type":"exact"},{"name":"sodium:proton antiporter regulator","type":"exact"}],"termid":"GO:0017155"}


id: PBO:0046289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 6","termid":"PBO:0046289"}


id: FYPO:0001532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of S phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic S phase progression","termid":"FYPO:0003246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal duration of mitotic S phase","termid":"FYPO:0001532"}


id: PBO:0087046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L21B; homologous to mammalian ribosomal protein L21, no bacterial homolog; RPL21B has a paralog, RPL21A, that arose from the whole genome duplication","termid":"PBO:0087046"}


id: PBO:0109321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp20/Hsp15.8","termid":"PBO:0109321"}


id: PBO:0085207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outward-rectifier potassium channel of the plasma membrane; has two pore domains in tandem, each of which forms a functional channel permeable to potassium; carboxy tail functions to prevent inner gate closures; target of K1 toxin","termid":"PBO:0085207"}


id: FYPO:0002489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a spore lyses, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable spore","termid":"FYPO:0002151"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"},{"relation_name":"is_a","term_name":"cell lysis","termid":"FYPO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"spore lysis","synonyms":[{"name":"inviable, lysed spore","type":"exact"},{"name":"spore cytolysis","type":"exact"}],"termid":"FYPO:0002489"}


id: PBO:0082843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle protein; involved in vesicle formation and incorporation of specific secretory cargo; required for the delivery of bud-site selection protein Axl2p and Nha1p antiporter to cell surface; related to Drosophila cornichon; ERV14 has a paralog, ERV15, that arose from the whole genome duplication","termid":"PBO:0082843"}


id: MONDO:0007560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare reflex epilepsy characterized by reading-induced seizures which in most cases present with orofacial/jaw myoclonus possibly extending to the upper limbs but can also manifest as dyslexia or alexia and visual symptoms. In both variants secondary generalized tonic-clonic seizures may evolve if the stimulus is not interrupted. The disease typically begins in the second or third decade of life and may be inherited in an autosomal dominant pattern. It usually takes a benign course with little tendency to spontaneous seizures.","definition_xrefs":["Orphanet:166433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex epilepsy","termid":"MONDO:0017768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"reading seizures","secondary_identifiers":["GARD:17029","MEDGEN:75817","OMIM:132300","UMLS:C0278193"],"synonyms":[{"name":"EwRIS","type":"exact"},{"name":"epilepsy with reading-induced seizures","type":"exact"},{"name":"epilepsy, reading","type":"related"}],"termid":"MONDO:0007560","xrefs":{"Monarch":{"xref_id":"0007560"}}}


id: GO:1905110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pulmonary blood vessel remodeling.","definition_xrefs":["GO_REF:0000058","GOC:BHF_miRNA","GOC:bc","GOC:BHF","PMID:22161164","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood vessel remodeling","termid":"GO:0060313"},{"relation_name":"is_a","term_name":"regulation of pulmonary blood vessel remodeling","termid":"GO:1905109"},{"relation_name":"negatively_regulates","term_name":"pulmonary blood vessel remodeling","termid":"GO:0101010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pulmonary blood vessel remodeling","synonyms":[{"name":"down regulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"down-regulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"downregulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"inhibition of pulmonary blood vessel remodeling","type":"narrow"},{"name":"negative regulation of pulmonary blood vessel remodelling","type":"exact"}],"termid":"GO:1905110"}


id: PR:Q10178
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3B subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01797","PANTHER:PTHR12097:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.09c","secondary_identifiers":["UniProtKB:Q10178"],"synonyms":[{"name":"Spom972h-SF3B1","type":"exact"}],"termid":"PR:Q10178"}


id: PBO:0025503
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscle ?-enolase deficiency","termid":"PBO:0025503"}


id: GO:0002737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of plasmacytoid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dendritic cell cytokine production","termid":"GO:0002731"},{"relation_name":"is_a","term_name":"regulation of plasmacytoid dendritic cell cytokine production","termid":"GO:0002736"},{"relation_name":"negatively_regulates","term_name":"plasmacytoid dendritic cell cytokine production","termid":"GO:0002373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasmacytoid dendritic cell cytokine production","synonyms":[{"name":"down regulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"down-regulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"downregulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"inhibition of plasmacytoid dendritic cell cytokine production","type":"narrow"}],"termid":"GO:0002737"}


id: PBO:0002625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III transcription factor TFIIIA","termid":"PBO:0002625"}


id: MONDO:0006079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, cytologically malignant ameloblastoma that may metastasize.","definition_xrefs":["NCIT:C7492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"},{"relation_name":"is_a","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"ameloblastic carcinoma","secondary_identifiers":["EFO:1000078","MEDGEN:231088","GARD:11855","NORD:763","UMLS:C1314678","Orphanet:314422"],"synonyms":[{"name":"ameloblastic carcinoma","type":"exact"},{"name":"odontoma, ameloblastic, malignant","type":"exact"}],"termid":"MONDO:0006079","xrefs":{"Monarch":{"xref_id":"0006079"}}}


id: MONDO:0015604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle ear anomaly","secondary_identifiers":["Orphanet:164004","MEDGEN:540027","GARD:20056","UMLS:C0266599","MedDRA:10060957"],"termid":"MONDO:0015604","xrefs":{"Monarch":{"xref_id":"0015604"}}}


id: PBO:0052007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JDP2 antisense RNA 1","termid":"PBO:0052007"}


id: MONDO:1010485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetralogy of fallot, non-human animal","termid":"MONDO:1010021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, cattle","secondary_identifiers":["OMIA:000994-9913"],"termid":"MONDO:1010485","xrefs":{"Monarch":{"xref_id":"1010485"}}}


id: PBO:0005621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin synthase","termid":"PBO:0005621"}


id: GO:0042275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA via processes such as template switching, which does not remove the replication-blocking lesions but does not increase the endogenous mutation rate.","definition_xrefs":["GOC:jl","GOC:elh","PMID:11459630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postreplication repair","termid":"GO:0006301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"error-free postreplication DNA repair","synonyms":[{"name":"error-free PRR","type":"exact"},{"name":"error-free replication restart","type":"related"}],"termid":"GO:0042275"}


id: PBO:0062265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily F member 2 pseudogene","termid":"PBO:0062265"}


id: GO:0102947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (+)-delta-cadinene + NADPH + O2 = 8-hydroxy-(+)-delta-cadinene + NADP + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(+)-delta-cadinene-8-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9045"],"termid":"GO:0102947"}


id: MONDO:1012779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epidermolysis bullosa simplex that occurs in dogs due to a mutation in the KRT5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, dog","termid":"MONDO:1011500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, KRT5-related, dog","secondary_identifiers":["OMIA:002081-9615"],"termid":"MONDO:1012779","xrefs":{"Monarch":{"xref_id":"1012779"}}}


id: PBO:0036091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_translation_gene_mRNA_during_vegetative_growth","termid":"PBO:0036091"}


id: FYPO:0002051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, elongated, has no septum, and contains more than one nucleus. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002049"},{"relation_name":"is_a","term_name":"swollen multinucleate vegetative cell","termid":"FYPO:0004257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"swollen elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate vegetative cell with increased cell volume","type":"exact"},{"name":"enlarged elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"large elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"swollen elongated multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"swollen elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002051"}


id: PBO:0079535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2SURP pseudogene 1","termid":"PBO:0079535"}


id: PBO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as ncRNA","termid":"PBO:0000406"}


id: PBO:0087474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both RNase MRP and nuclear RNase P; RNase MRP cleaves pre-rRNA, while nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; binds to the RPR1 RNA subunit in RNase P","termid":"PBO:0087474"}


id: GO:2000146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell motility.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of locomotion","termid":"GO:0040013"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell motility","termid":"GO:2000145"},{"relation_name":"negatively_regulates","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell motility","synonyms":[{"name":"negative regulation of cell locomotion","type":"exact"},{"name":"negative regulation of cell movement","type":"related"},{"name":"negative regulation of movement of a cell","type":"exact"}],"termid":"GO:2000146"}


id: GO:1905291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CAMKK-AMPK signaling cascade.","definition_xrefs":["GOC:TermGenie","PMID:22128786","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"is_a","term_name":"regulation of CAMKK-AMPK signaling cascade","termid":"GO:1905289"},{"relation_name":"positively_regulates","term_name":"CAMKK-AMPK signaling cascade","termid":"GO:0061762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of CAMKK-AMPK signaling cascade","synonyms":[{"name":"activation of CAMKK-AMPK signaling cascade","type":"narrow"},{"name":"activation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"positive regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up-regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up-regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"upregulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"upregulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:1905291"}


id: PBO:0059508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded conserved sequence block I","termid":"PBO:0059508"}


id: PBO:0083122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichol phosphate mannose (Dol-P-Man) synthase of ER membrane; catalyzes formation of Dol-P-Man from Dol-P and GDP-Man; required for biosynthesis of glycosyl phosphatidylinositol (GPI) membrane anchor, as well as O-mannosylation and protein N- and O-linked glycosylation; human homolog DPM1 can complement yeast mutant strains","termid":"PBO:0083122"}


id: PBO:0045641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 5","termid":"PBO:0045641"}


id: PBO:0043731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 10","termid":"PBO:0043731"}


id: BFO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precedes","termid":"BFO:0000063"}


id: PBO:0031639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_shmoo_formation","termid":"PBO:0031639"}


id: GO:0097684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The anterior most point of a dinoflagellate hypocone.","definition_xrefs":["GOC:at","Wikipedia:Dinoflagellate#Morphology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dinoflagellate hypocone","termid":"GO:0097614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate antapex","synonyms":[{"name":"antapex","type":"broad"}],"termid":"GO:0097684"}


id: PBO:0040400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 1","termid":"PBO:0040400"}


id: PATO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000335 variegated (obsolete PATO:0000335)","synonyms":[{"name":"mottled (sensu Drosophila)","type":"related"}],"termid":"PATO:0000335"}


id: GO:0036296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting an increase in the level of oxygen.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen levels","termid":"GO:0070482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to increased oxygen levels","synonyms":[{"name":"response to raised oxygen levels","type":"exact"}],"termid":"GO:0036296"}


id: GO:1990043
data:
  {"annotated_genes":["SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105413],"is_not":false,"summary":null,"term":"GO:1990043"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage immediately 5' to pyrimidine dimers to products with 5'-phosphate.","definition_xrefs":["PMID:9708997","EC:3.1.25.-","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonuclease (pyrimidine dimer) activity","termid":"GO:0033892"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01262":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5' deoxyribonuclease (pyrimidine dimer) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990043","terms_by_termid":{"GO:1990043":null}}


id: MONDO:0012156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by defects in postsynaptic neuromuscular junctions with early-onset progressive muscle weakness that has material basis in mutation in the CHRNA1 gene on chromosome 2q.","definition_xrefs":["PMID:15079006","DOID:0110662","PMID:25792100","PMID:10195214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 1A","termid":"MONDO:0011088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenic syndrome, congenital, 1B, fast-channel","secondary_identifiers":["GARD:15445","OMIM:608930","MEDGEN:909200","UMLS:C4225405"],"synonyms":[{"name":"CMS1B","type":"exact"},{"name":"congenital myasthenic syndrome 1B","type":"related"},{"name":"congenital myasthenic syndrome 1B, fast-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 1B","type":"exact"},{"name":"myasthenic syndrome, congenital, 1B, FAST-channel","type":"related"},{"name":"myasthenic syndrome, congenital, 1B, fast-channel","type":"exact"}],"termid":"MONDO:0012156","xrefs":{"Monarch":{"xref_id":"0012156"}}}


id: MONDO:0015645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare reflex epilepsy characterized by in most cases complex partial seizures triggered by different components of eating, such as the sight of food, proprioceptive, olfactory or gustatory sensations, chewing, salivation, and gastric distension after food intake. The seizures may be idiopathic or associated with symptomatic localization-related epilepsies.","definition_xrefs":["Orphanet:166418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex epilepsy","termid":"MONDO:0017768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"eating seizures","secondary_identifiers":["UMLS:C0393725","MEDGEN:581543","GARD:20078","SCTID:230450001"],"synonyms":[{"name":"eating epilepsy","type":"exact"},{"name":"eating reflex epilepsy","type":"related"}],"termid":"MONDO:0015645","xrefs":{"Monarch":{"xref_id":"0015645"}}}


id: GO:0070277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways by which iodide is converted to diiodine, with the concomitant loss of electrons.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete iodide oxidation (obsolete GO:0070277)","termid":"GO:0070277"}


id: MONDO:0013964
data:
  {"annotated_genes":["SJAG_00921"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86711],"is_not":false,"summary":null,"term":"MONDO:0013964"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPL26 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00921":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614900","DOID:0111892","NCIT:C176920","UMLS:C3554042","GARD:15879","MEDGEN:766956"],"synonyms":[{"name":"DBA11","type":"related"},{"name":"Diamond-Blackfan Anaemia type 11","type":"exact"},{"name":"Diamond-Blackfan Anemia type 11","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPL26","type":"exact"},{"name":"Diamond-Blackfan anemia 11","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPL26","type":"exact"},{"name":"RPL26 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPL26 Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0013964","terms_by_termid":{"MONDO:0013964":null},"xrefs":{"Monarch":{"xref_id":"0013964"}}}


id: PBO:0033781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_site-specific_DNA_replication_termination_at_RTS1_barrier","termid":"PBO:0033781"}


id: GO:0075527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which bases in viral mRNA are chemically altered during viral transcription. This is usually the incorporation of 1 - 6 additional nucleotides, which shifts the reading frame, allowing the generation of different protein products or through a specific nucleotide change that eliminates the termination codon.","definition_xrefs":["PMID:1629949","VZ:857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA editing","synonyms":[{"name":"RNA editing involved in viral mRNA transcription","type":"exact"}],"termid":"GO:0075527"}


id: FYPO:0000232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the actomyosin contractile ring splits upon initiation of contraction during anaphase B, resulting in the formation of a primary ring that undergoes constriction and a secondary ring that does not constrict.","definition_xrefs":["PomBase:mah","PMID:18272786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring morphology","termid":"FYPO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0004803","FYPO:0000631"],"is_obsolete":false,"name":"split actomyosin contractile ring","synonyms":[{"name":"abnormal contractile ring contraction with contractile ring splitting","type":"related"},{"name":"actomyosin contractile ring splitting","type":"related"},{"name":"actomyosin contractile ring splitting upon contraction","type":"related"},{"name":"cytokinesis defects, splitting of the actinomyosin ring","type":"related"},{"name":"split actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"split actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"split cytokinetic contractile ring","type":"exact"},{"name":"split mitotic contractile ring","type":"exact"}],"termid":"FYPO:0000232"}


id: GO:1905294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neural crest cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:15073157","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of neural crest cell differentiation","termid":"GO:1905292"},{"relation_name":"is_a","term_name":"positive regulation of stem cell differentiation","termid":"GO:2000738"},{"relation_name":"positively_regulates","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neural crest cell differentiation","synonyms":[{"name":"activation of neural crest cell differentiation","type":"narrow"},{"name":"up regulation of neural crest cell differentiation","type":"exact"},{"name":"up-regulation of neural crest cell differentiation","type":"exact"},{"name":"upregulation of neural crest cell differentiation","type":"exact"}],"termid":"GO:1905294"}


id: MONDO:0009216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi-Bickel glycogenosis (FBG) is a rare glycogen storage disease characterized by hepatorenal glycogen accumulation, severe renal tubular dysfunction and impaired glucose and galactose metabolism.","definition_xrefs":["Orphanet:2088"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"excluded_subClassOf","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"excluded_subClassOf","term_name":"glucose transport disorder","termid":"MONDO:0019226"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease due to GLUT2 deficiency","secondary_identifiers":["GARD:2268","SCTID:61598006","UMLS:C3495427","DOID:0070562","icd11.foundation:426701963","MEDGEN:501176","OMIM:227810"],"synonyms":[{"name":"Bickel-Fanconi glycogenosis","type":"exact"},{"name":"FBS","type":"exact"},{"name":"Fanconi Bickel syndrome","type":"exact"},{"name":"Fanconi syndrome with intestinal malabsorption and galactose intolerance","type":"exact"},{"name":"Fanconi-Bickel disease","type":"exact"},{"name":"Fanconi-Bickel syndrome","type":"exact"},{"name":"GLUT2 deficiency","type":"related"},{"name":"GSD due to GLUT2 deficiency","type":"exact"},{"name":"GSD type 11","type":"related"},{"name":"GSD type XI","type":"related"},{"name":"glycogen storage disease 11","type":"related"},{"name":"glycogen storage disease XI","type":"related"},{"name":"glycogen storage disease due to GLUT2 deficiency","type":"exact"},{"name":"glycogen storage disease type 11","type":"related"},{"name":"glycogen storage disease type XI","type":"related"},{"name":"glycogenosis Fanconi EXACT","type":"related"},{"name":"glycogenosis due to GLUT2 deficiency","type":"exact"},{"name":"glycogenosis, Fanconi type","type":"related"},{"name":"hepatic glycogenosis with Fanconi nephropathy","type":"related"},{"name":"hepatic glycogenosis with amino aciduria and glucosuria","type":"related"},{"name":"hepatorenal glycogenosis with renal Fanconi syndrome","type":"related"},{"name":"hepatorenal glycogenosis with renal fanconi syndrome","type":"related"},{"name":"pseudo-phlorizin diabetes","type":"related"}],"termid":"MONDO:0009216","xrefs":{"Monarch":{"xref_id":"0009216"}}}


id: FYPO:0002256
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118809,118814,118816,118743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003779"},{"annotations":[118656,118652,118660,118668,118665,118653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001556"},{"annotations":[118950],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleus","termid":"FYPO:0002403"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03940":null,"SJAG_04464":null},"genotype_count":11,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nuclear morphology","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_01906","SJAG_04464","SJAG_01745","SJAG_03449","SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta","lem2delta","nem1delta","ned1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"deformed nucleus","type":"exact"},{"name":"nuclear morphology defects","type":"exact"}],"termid":"FYPO:0002256","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO_EXT:0000001":null}}


id: GO:0052893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N1-acetylspermine + oxygen + H2O = N-(3-acetamidopropyl)-4-aminobutanal + propane-1,3-diamine + hydrogen peroxide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N1-acetylspermine:oxygen oxidoreductase (propane-1,3-diamine-forming) activity (obsolete GO:0052893)","termid":"GO:0052893"}


id: GO:2000837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of androstenedione secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"androstenedione secretion","termid":"GO:0035941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of androstenedione secretion","synonyms":[{"name":"regulation of androst-4-ene-3,17-dione secretion","type":"exact"}],"termid":"GO:2000837"}


id: MONDO:0005239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dedifferentiated liposarcoma (obsolete MONDO:0005239)","termid":"MONDO:0005239","xrefs":{"Monarch":{"xref_id":"0005239"}}}


id: GO:0102393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: FAD + H+ + a decanoyl-HmqF protein = FADH2(2-) + a 2,3-dehydro-decanoyl-HmqF.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete decanoyl-[acp] 2-dehydrogenase activity (obsolete GO:0102393)","termid":"GO:0102393"}


id: MONDO:0700090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the LGI1 gene, encoding leucine-rich glioma-inactivated protein 1. It is characterized by partial seizures originating in the temporal lobe and often accompanied by auditory sensory manifestations.","definition_xrefs":["NCIT:C141441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"},{"relation_name":"is_a","term_name":"autosomal dominant epilepsy with auditory features","termid":"MONDO:0010898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial temporal lobe, 1","secondary_identifiers":["OMIM:600512","DOID:0060748","MEDGEN:1643229","UMLS:C4551957"],"synonyms":[{"name":"ADLTE","type":"exact"},{"name":"ADPEAF","type":"exact"},{"name":"ETL1","type":"exact"},{"name":"epilepsy, familial temporal lobe, type 1","type":"exact"},{"name":"epilepsy, lateral temporal lobe, autosomal dominant","type":"exact"},{"name":"epilepsy, partial, with auditory features","type":"exact"}],"termid":"MONDO:0700090","xrefs":{"Monarch":{"xref_id":"0700090"}}}


id: GO:0060067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the cervix over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cervix development","synonyms":[{"name":"Mullerian tract development","type":"related"}],"termid":"GO:0060067"}


id: SO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Edited mRNA sequence mediated by two or more overlapping guide RNAs (SO:0000602).","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"editing_domain","synonyms":[{"name":"editing domain","type":"exact"}],"termid":"SO:0000606"}


id: PBO:0061881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein family member 4A","termid":"PBO:0061881"}


id: FYPO:0001717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malonic acid into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal malonic acid import","synonyms":[{"name":"abnormal malonate import","type":"related"},{"name":"abnormal malonic acid import across plasma membrane","type":"exact"},{"name":"abnormal malonic acid import during mitotic cell cycle","type":"related"},{"name":"abnormal malonic acid import during vegetative growth","type":"exact"},{"name":"abnormal malonic acid import into cell","type":"exact"},{"name":"abnormal malonic acid uptake","type":"exact"}],"termid":"FYPO:0001717"}


id: GO:1905905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a nematode pharyngeal gland is generated and organized.","definition_xrefs":["GO_REF:0000083","GOC:TermGenie","PMID:21868609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharyngeal gland morphogenesis","synonyms":[{"name":"glandulae pharyngeae morphogenesis","type":"related"},{"name":"pharynx gland morphogenesis","type":"exact"}],"termid":"GO:1905905"}


id: MONDO:0009133
data:
  {"annotated_genes":["SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"}]},"cv_name":"mondo","definition":"A non-progressive cerebellar disorder characterized by ataxia associated with an intellectual disability, delayed ambulation and cerebellar hypoplasia.","definition_xrefs":["Orphanet:1766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive congenital cerebellar ataxia","termid":"MONDO:0020043"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01945":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"cerebellar ataxia, intellectual disability, and dysequilibrium","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:230782004","MEDGEN:98295","GARD:1998","DOID:0050997","MedDRA:10013140","MESH:C535731","NCIT:C114781","OMIMPS:224050","UMLS:C0394006"],"synonyms":[{"name":"CAMRQ","type":"exact"},{"name":"CAMRQ syndrome","type":"exact"},{"name":"DES","type":"related"},{"name":"VLDLRCH","type":"related"},{"name":"cerebellar ataxia, mental retardation and dysequlibrium syndrome","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium","type":"exact"},{"name":"cerebellar ataxia-intellectual disability-dysequilibrium syndrome syndrome","type":"exact"},{"name":"cerebellar disorder, nonprogressive, with mental retardation","type":"related"},{"name":"cerebellar hypoplasia, VLDLR associated","type":"related"},{"name":"dialysis dysequilibrium syndrome","type":"exact"},{"name":"dysequilibrium syndrome","type":"exact"},{"name":"non-progressive cerebellar ataxia-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0009133","terms_by_termid":{"MONDO:0014104":null},"xrefs":{"Monarch":{"xref_id":"0009133"}}}


id: MONDO:0001251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of periapical periodontitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periapical periodontitis","termid":"MONDO:0004508"},{"relation_name":"is_a","term_name":"chronic periodontitis","termid":"MONDO:0005593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic apical periodontitis","secondary_identifiers":["DOID:11269","ICD9:522.6","MEDGEN:581135","UMLS:C0392492","SCTID:718052004","ICD10CM:K04.5","icd11.foundation:1079140240"],"synonyms":[{"name":"chronic periapical periodontitis","type":"exact"},{"name":"periapical periodontitis, chronic","type":"exact"}],"termid":"MONDO:0001251","xrefs":{"Monarch":{"xref_id":"0001251"}}}


id: PBO:0002820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase activating protein (predicted)","termid":"PBO:0002820"}


id: PBO:0004717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit F (predicted)","termid":"PBO:0004717"}


id: PBO:0041884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 2 pseudogene 1","termid":"PBO:0041884"}


id: PBO:0054584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1987","termid":"PBO:0054584"}


id: MONDO:0030911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 46","secondary_identifiers":["OMIM:617601","DOID:0080237","UMLS:C4539851","MEDGEN:1618560"],"synonyms":[{"name":"MRD46","type":"related"},{"name":"autosomal dominant intellectual disability 46","type":"related"},{"name":"autosomal dominant mental retardation 46","type":"related"},{"name":"intellectual disability, autosomal dominant 46","type":"exact"},{"name":"mental retardation, autosomal dominant 46","type":"related"}],"termid":"MONDO:0030911","xrefs":{"Monarch":{"xref_id":"0030911"}}}


id: MONDO:0011360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation between D7S554 and D7S2459 in the chromosome region 7q31.","definition_xrefs":["DOID:0110469","PMID:9887371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 14","secondary_identifiers":["MEDGEN:350931","GARD:22596","MESH:C566344","OMIM:603678","UMLS:C1863613"],"synonyms":[{"name":"DFNB14","type":"narrow"},{"name":"autosomal recessive deafness 14","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 14","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 14","type":"narrow"},{"name":"deafness, autosomal recessive 14","type":"narrow"}],"termid":"MONDO:0011360","xrefs":{"Monarch":{"xref_id":"0011360"}}}


id: PR:O60188
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp6 gene.","definition_xrefs":["UniProtKB:O60188","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC244.02c","synonyms":[{"name":"Spom972h-utp6","type":"exact"},{"name":"U3 snoRNA-associated protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60188"}


id: GO:0052002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of substance in host (obsolete GO:0052002)","termid":"GO:0052002"}


id: PBO:0004580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Pgp2","termid":"PBO:0004580"}


id: PBO:0042824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 3","termid":"PBO:0042824"}


id: GO:0032002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-28 and interleukin-29. It is composed of an alpha and a beta receptor subunit (in human IFNLR1/IL28Ralpha & IL10RB) and either Interleukin-28 (IFNL2 or IFNL3) or Interleukin-29 (IFNL1).","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"interleukin-28 receptor complex","synonyms":[{"name":"IL-28 receptor complex","type":"exact"}],"termid":"GO:0032002"}


id: GO:0086049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the AV node cardiac muscle cell membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"AV node cell action potential","termid":"GO:0086016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane repolarization during AV node cell action potential","synonyms":[{"name":"membrane repolarization involved in regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086049"}


id: GO:0003952
data:
  {"annotated_genes":["SJAG_02618"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116745],"is_not":false,"summary":null,"term":"GO:0003952"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + deamido-NAD+ + L-glutamine + H2O = AMP + diphosphate + NAD+ + L-glutamate.","definition_xrefs":["EC:6.3.5.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02618":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"NAD+ synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:NAD-SYNTH-GLN-RXN","RHEA:24384","Reactome:R-HSA-197271","Wikipedia:NAD+_synthase_(glutamine-hydrolysing)"],"synonyms":[{"name":"DPN synthetase activity","type":"related"},{"name":"NAD synthase (glutamine-hydrolyzing) activity","type":"exact"},{"name":"NAD synthetase (glutamine-hydrolysing)","type":"related"},{"name":"NAD(+) synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"NAD+ synthase (glutamine-hydrolysing)","type":"related"},{"name":"NAD+ synthetase (glutamine-hydrolyzing)","type":"related"},{"name":"deamido-NAD+:L-glutamine amido-ligase (AMP-forming)","type":"related"},{"name":"desamidonicotinamide adenine dinucleotide amidotransferase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide synthetase (glutamine) activity","type":"related"}],"termid":"GO:0003952","terms_by_termid":{"GO:0003952":null}}


id: GO:0102879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-thujopsene + diphosphoric acid.","definition_xrefs":["RHEA:30375","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(+)-thujopsene synthase activity","secondary_identifiers":["MetaCyc:RXN-8418","EC:4.2.3.79"],"termid":"GO:0102879"}


id: GO:1902090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumagillin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23488861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"fumagillin biosynthetic process","termid":"GO:1902086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of fumagillin biosynthetic process","synonyms":[{"name":"regulation of fumagillin anabolism","type":"exact"},{"name":"regulation of fumagillin biosynthesis","type":"exact"},{"name":"regulation of fumagillin formation","type":"exact"},{"name":"regulation of fumagillin synthesis","type":"exact"}],"termid":"GO:1902090"}


id: PBO:0071940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 17","termid":"PBO:0071940"}


id: PBO:0040256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATG10 intronic transcript 1","termid":"PBO:0040256"}


id: MONDO:0009729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephropathy-deafness-hyperparathyroidism syndrome is characterized by renal failure without haematuria, parathyroid hyperplasia and sensorineural deafness. It has been described in five children born to consanguineous patents. The mode of inheritance appears to be autosomal recessive.","definition_xrefs":["Orphanet:2668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy - deafness - hyperparathyroidism syndrome","secondary_identifiers":["OMIM:256120","SCTID:724093004","MESH:C536401","UMLS:C1850553","MEDGEN:340569","GARD:3940"],"synonyms":[{"name":"Edwards Patton Dilly syndrome","type":"related"},{"name":"Edwards-Patton-Dilly syndrome","type":"exact"},{"name":"nephropathy - deafness - hyperparathyroidism","type":"related"},{"name":"nephropathy, deafness, and hyperparathyroidism","type":"related"}],"termid":"MONDO:0009729","xrefs":{"Monarch":{"xref_id":"0009729"}}}


id: PBO:0018222
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FE Protein","termid":"PBO:0018222"}


id: PBO:0041602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 13","termid":"PBO:0041602"}


id: FYECO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which melissic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ melissic acid","termid":"FYECO:0000053"}


id: MONDO:0014498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial cold autoinflammatory syndrome in which the cause of the disease is a mutation in the NLRC4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cold autoinflammatory syndrome","termid":"MONDO:0018768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial cold autoinflammatory syndrome 4","secondary_identifiers":["UMLS:C4015276","Orphanet:576349","DOID:0090065","GARD:16061","MEDGEN:863713","OMIM:616115"],"synonyms":[{"name":"FCAS4","type":"related"},{"name":"NLRC4 familial cold autoinflammatory syndrome","type":"exact"},{"name":"NLRC4-related familial cold autoinflammatory syndrome","type":"exact"},{"name":"familial cold autoinflammatory syndrome 4","type":"exact"},{"name":"familial cold autoinflammatory syndrome caused by mutation in NLRC4","type":"exact"},{"name":"familial cold autoinflammatory syndrome type 4","type":"exact"}],"termid":"MONDO:0014498","xrefs":{"Monarch":{"xref_id":"0014498"}}}


id: PBO:0044892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 4","termid":"PBO:0044892"}


id: PBO:0043206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKMT2 antisense RNA 1","termid":"PBO:0043206"}


id: PBO:0060953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor kappa B subunit 1","termid":"PBO:0060953"}


id: GO:0000772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of binding to and activating specific cell surface receptors, thereby inducing a behavioral or physiological response(s) from a responding organism or cell that leads to the transfer or union of genetic material between organisms or cells. The mating pheromone can either be retained on the cell surface or secreted.","definition_xrefs":["GOC:clt","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pheromone activity","termid":"GO:0005186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005186"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0140677","GO:0098772","GO:0005515","GO:0005186"],"is_obsolete":false,"name":"mating pheromone activity","termid":"GO:0000772"}


id: GO:0061523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of a cilium.","definition_xrefs":["PMID:27350441","PMID:17604723","GOC:cilia","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium organization","termid":"GO:0044782"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium disassembly","synonyms":[{"name":"cilium resorption","type":"exact"}],"termid":"GO:0061523"}


id: PBO:0027970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_reactive_oxygen_species_level_during_nitrogen_starvation","termid":"PBO:0027970"}


id: PBO:0044672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopa decarboxylase","termid":"PBO:0044672"}


id: GO:0097527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals which triggers the necroptotic death of a cell. The pathway starts with reception of a signal, is characterized by activation of receptor-interacting serine/threonine-protein kinase 1 and/or 3 (RIPK1/3, also called RIP1/3), and ends when the execution phase of necroptosis is triggered.","definition_xrefs":["PMID:20823910","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"necroptotic signaling pathway","synonyms":[{"name":"necroptosis signaling","type":"related"},{"name":"necroptosis signaling pathway","type":"exact"},{"name":"necroptotic signal transduction","type":"exact"},{"name":"necroptotic signalling pathway","type":"related"}],"termid":"GO:0097527"}


id: PR:000085720
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P09988, 2-136, Lys-37, MOD:00083.","definition_xrefs":["PomBase:VW","PMID:37459529","PRO:DAN"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me3(K36)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-37, MOD:00083","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K36-trimethylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K36Me3","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-37, MOD:00083","type":"related"},{"name":"hht1/Me3(K36)","type":"exact"}],"termid":"PR:000085720"}


id: GO:0000972
data:
  {"annotated_genes":["SJAG_04347","SJAG_03299","SJAG_04148","SJAG_04379","SJAG_03986","SJAG_02757","SJAG_00298","SJAG_01374"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90466,99908,103429,112690],"is_not":false,"summary":null,"term":"GO:0000972"},{"annotations":[88521,109881,101455,69306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000973"}]},"cv_name":"biological_process","definition":"The chromosome organization process in which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery. In S. cerevisiae, this process involves cis-acting DNA sequences such as the TATA box and upstream activating sequence (UAS) elements, trans-acting transcriptional activators, and also the 3'-UTR of the transcript.","definition_xrefs":["GOC:krc","PMID:18614049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00298":null,"SJAG_01374":null,"SJAG_02757":null,"SJAG_03299":null,"SJAG_03986":null,"SJAG_04148":null,"SJAG_04347":null,"SJAG_04379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000972","terms_by_termid":{"GO:0000972":null,"GO:0000973":null}}


id: GO:0180011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which dormant, translationally inactive mRNAs become activated, or mRNAs become stabilized, via the elongation of their poly(A) tails in the cytosol.","definition_xrefs":["PMID:21536428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"cytosolic mRNA polyadenylation","termid":"GO:0180011"}


id: PBO:0073505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 1A","termid":"PBO:0073505"}


id: MONDO:0006453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An aggressive, small cell, poorly differentiated thymic neuroendocrine carcinoma, characterized by the presence of a high mitotic rate and numerous apoptotic bodies.","definition_xrefs":["NCIT:C6460"],"gene_count":0,"genotype_count":0,"name":"obsolete thymic small cell carcinoma (obsolete MONDO:0006453)","termid":"MONDO:0006453","xrefs":{"Monarch":{"xref_id":"0006453"}}}


id: GO:0110130
data:
  {"annotated_genes":["SJAG_04964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99760],"is_not":false,"summary":null,"term":"GO:0110130"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ribitol-5-phosphate + H20 = ribitol + phosphate.","definition_xrefs":["GOC:rn","PMID:30240188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"ribitol-5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:47648"],"termid":"GO:0110130","terms_by_termid":{"GO:0110130":null}}


id: FYPO:0007090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription as a consequence of the presence of one or more specific nutrient(s) is abnormal. For example, specific genes that are normally not transcribed in the presence of the nutrient may be transcribed in the mutant, or vice versa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of transcription by nutrient","synonyms":[{"name":"abnormal regulation of transcription by nutrient during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of transcription by nutrient during vegetative growth","type":"exact"},{"name":"nutrient-insensitive transcription","type":"related"}],"termid":"FYPO:0007090"}


id: MOD:00780
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N-acetyl-L-asparagine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-asparagine","synonyms":[{"name":"AcAsn","type":"exact"}],"termid":"MOD:00780"}


id: PBO:0074694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70D","termid":"PBO:0074694"}


id: PBO:0088880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anillin-related medial ring protein Mid1","termid":"PBO:0088880"}


id: PBO:0060633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicalin","termid":"PBO:0060633"}


id: GO:0097755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of blood vessel diameter (obsolete GO:0097755)","synonyms":[{"name":"positive regulation of vasodilation","type":"related"}],"termid":"GO:0097755"}


id: PBO:0074829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 25","termid":"PBO:0074829"}


id: PR:P78962
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atf21 gene.","definition_xrefs":["UniProtKB:P78962","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor atf21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.09c","synonyms":[{"name":"Spom972h-atf21","type":"exact"}],"termid":"PR:P78962"}


id: MONDO:0020480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"encephalopathy due to sulfite oxidase deficiency","termid":"MONDO:0019358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency","secondary_identifiers":["icd11.foundation:819219337","OMIMPS:252150","UMLS:C0268119","GARD:3705","MEDGEN:75652","Orphanet:99732","DOID:0111165"],"synonyms":[{"name":"MOCOD","type":"exact"},{"name":"combined deficiency of sulfite oxidase, xanthine dehydrogenase and aldehyde oxidase","type":"exact"},{"name":"combined deficiency of sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase","type":"related"},{"name":"molybdenum cofactor deficiency","type":"related"}],"termid":"MONDO:0020480","xrefs":{"Monarch":{"xref_id":"0020480"}}}


id: PBO:0080494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VWC2L intronic transcript 1","termid":"PBO:0080494"}


id: GO:0006223
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91478],"is_not":false,"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates uracil, 2,4-dioxopyrimidine, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase salvage","termid":"GO:0043100"},{"relation_name":"is_a","term_name":"uracil biosynthetic process","termid":"GO:0046107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"uracil salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006223","terms_by_termid":{"GO:0006223":null}}


id: GO:1990331
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetrameric protein complex capable of acetyltransferase activity. It can catalyze the transfer of an acetyl group from acetyl-CoA to an acceptor residue on histone H-3, histone H-4, or on polyamines. The complex is also capable of acetylating certain small basic proteins. The two Hpa2 dimers that make up the tetramer are held together by interactions between the bound acetyl-CoA molecules.","definition_xrefs":["PMID:10600387","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"},{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Hpa2 acetyltransferase complex","termid":"GO:1990331"}


id: GO:1900354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methanofuran metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of methanofuran metabolic process","synonyms":[{"name":"regulation of methanofuran metabolism","type":"exact"}],"termid":"GO:1900354"}


id: PBO:0076579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 7","termid":"PBO:0076579"}


id: GO:0046020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving pheromones that stops, prevents or reduces the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter by pheromones (obsolete GO:0046020)","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter by pheromones","type":"narrow"},{"name":"negative regulation of transcription from Pol II promoter by pheromones","type":"exact"}],"termid":"GO:0046020"}


id: MONDO:0957408
data:
  {"annotated_genes":["SJAG_01884","SJAG_04969","SJAG_04290","SJAG_04380","SJAG_00400","SJAG_02039","SJAG_04541","SJAG_04569","SJAG_03151","SJAG_03805","SJAG_05239","SJAG_04118"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[84704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[84707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[84793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[86802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014629"},{"annotations":[86274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[86085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[84958,84957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"},{"annotations":[85959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[85810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[85176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010523"}]},"cv_name":"mondo","definition":"A type 1 interferonopathy that occurs during childhood.","definition_xrefs":["MONDO:patterns/childhood"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 1 interferonopathy","termid":"MONDO:0700264"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome of childhood","termid":"MONDO:0957018"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_03151":null,"SJAG_03805":null,"SJAG_04118":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04569":null,"SJAG_04969":null,"SJAG_05239":null},"genotype_count":0,"is_obsolete":false,"name":"type 1 interferonopathy of childhood","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:481671","UMLS:C5681250","GARD:21986","MEDGEN:1843010"],"termid":"MONDO:0957408","terms_by_termid":{"MONDO:0010523":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0013818":null,"MONDO:0014007":null,"MONDO:0014629":null,"MONDO:0024541":null,"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null},"xrefs":{"Monarch":{"xref_id":"0957408"}}}


id: MONDO:0013462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 6 deficiency","secondary_identifiers":["MEDGEN:462569","OMIM:613852","UMLS:C3151219"],"synonyms":[{"name":"fucosyltransferase 6 deficiency","type":"exact"}],"termid":"MONDO:0013462","xrefs":{"Monarch":{"xref_id":"0013462"}}}


id: PBO:0049082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 137B","termid":"PBO:0049082"}


id: GO:0036521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of protein localisation to the host phagosome. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:PARL","PMID:25063865","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host protein localization to phagocytic vesicle (obsolete GO:0036521)","synonyms":[{"name":"modulation by symbiont of host protein localisation to phagosome","type":"related"}],"termid":"GO:0036521"}


id: PBO:0041555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 38","termid":"PBO:0041555"}


id: GO:0033053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-glutamine, the D-enantiomer of the amino acid glutamine, i.e. (2R)-2,5-diamino-5-oxopentanoic acid.","definition_xrefs":["GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine metabolic process","termid":"GO:0006541"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-glutamine metabolic process","synonyms":[{"name":"D-glutamine metabolism","type":"exact"}],"termid":"GO:0033053"}


id: GO:1901314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2A K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2A K63-linked ubiquitination (obsolete GO:1901314)","termid":"GO:1901314"}


id: PBO:0050744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 6","termid":"PBO:0050744"}


id: MONDO:0017042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thanatophoric dysplasia (TD) is a severe and generally lethal skeletal dysplasia presenting in the prenatal period and characterized by micromelia, macrocephaly, narrow thorax, and distinctive facial features. It includes TD, type 1 (TD1) and TD, type 2 (TD2), that can be differentiated from each other by femur and skull shape.","definition_xrefs":["Orphanet:2655"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with micromelia (obsolete MONDO:0018232)","termid":"MONDO:0018232"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"FGFR3-related chondrodysplasia","termid":"MONDO:0019685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"thanatophoric dysplasia","secondary_identifiers":["SCTID:29352008","DOID:13481","icd11.foundation:1668919215","MedDRA:10049808","MESH:D013796","UMLS:C0039743","NCIT:C85187","NANDO:1200874","ICD9:259.4","MEDGEN:21124","GARD:85"],"synonyms":[{"name":"TD","type":"exact"},{"name":"Td","type":"exact"},{"name":"dwarfism thanatophoric","type":"related"},{"name":"thanatophoric dwarfism","type":"exact"}],"termid":"MONDO:0017042","xrefs":{"Monarch":{"xref_id":"0017042"}}}


id: PBO:0083567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ERV46/YAL042W; YAL042C-A is a non-essential gene","termid":"PBO:0083567"}


id: MONDO:0005225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myeloblastic leukemia with maturation (obsolete MONDO:0005225)","termid":"MONDO:0005225","xrefs":{"Monarch":{"xref_id":"0005225"}}}


id: GO:1901037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are transcribed during the M/G1 transition of the mitotic cell cycle.","definition_xrefs":["GOC:mah","PMID:12411492","GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter during M/G1 transition of mitotic cell cycle (obsolete GO:1901037)","synonyms":[{"name":"global transcription regulation from Pol II promoter during M/G1 transition of mitotic cell cycle","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter during M/G1 transition of mitotic cell cycle","type":"related"},{"name":"regulation of global transcription from Pol II promoter during M/G1 transition of mitotic cell cycle","type":"related"},{"name":"regulation of transcription during M/G1 transition of mitotic cell cycle","type":"broad"},{"name":"regulation of transcription from Pol II promoter during M/G1 transition of mitotic cell cycle","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter during M/G1 transition of mitotic cell cycle","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in M/G1 transition of mitotic cell cycle","type":"related"}],"termid":"GO:1901037"}


id: PBO:0043306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin heavy chain linker domain containing 1","termid":"PBO:0043306"}


id: MONDO:0019514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic veno-occlusive disease (hepatic VOD) is a condition resulting from toxic injury to the hepatic sinusoidal capillaries that leads to obstruction of the small hepatic veins.","definition_xrefs":["Orphanet:890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatic veno-occlusive disease","secondary_identifiers":["UMLS:C0019156","MESH:D006504","NCIT:C26793","DOID:0080177","SCTID:65617004","GARD:13004","ICD10CM:K76.5","MEDGEN:5514","ICD9:453.89","MedDRA:10047216","NORD:879","icd11.foundation:762044088"],"synonyms":[{"name":"Budd Chiari Syndrome","type":"exact"},{"name":"hepatic Vod","type":"exact"},{"name":"liver veno-occlusive disease","type":"exact"},{"name":"sinusoidal obstruction syndrome","type":"exact"},{"name":"veno-occlusive disease","type":"related"}],"termid":"MONDO:0019514","xrefs":{"Monarch":{"xref_id":"0019514"}}}


id: PR:O14320
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa1 gene.","definition_xrefs":["UniProtKB:O14320","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.03c","synonyms":[{"name":"Spom972h-coa1","type":"exact"}],"termid":"PR:O14320"}


id: PBO:0063747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 12","termid":"PBO:0063747"}


id: MONDO:0018088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial Mediterranean fever (FMF) is an autoinflammatory disorder characterized by recurrent short episodes of fever and serositis resulting in pain in the abdomen, chest, joints and muscles.","definition_xrefs":["Orphanet:342"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial Mediterranean fever","secondary_identifiers":["MESH:D010505","NANDO:1200863","NCIT:C84707","NORD:1130","UMLS:C0031069","ICD9:277.31","SCTID:12579009","NANDO:2200431","MEDGEN:45811","GARD:6421","DOID:2987","icd11.foundation:1373335705","MedDRA:10016207"],"synonyms":[{"name":"FMF","type":"exact"},{"name":"Fiebre mediterránea familiar","type":"exact"},{"name":"benign paroxysmal peritonitis","type":"exact"},{"name":"benign recurrent polyserositis","type":"exact"},{"name":"familial paroxysmal polyserositis","type":"exact"},{"name":"periodic disease","type":"exact"}],"termid":"MONDO:0018088","xrefs":{"Monarch":{"xref_id":"0018088"}}}


id: PBO:0081484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 366","termid":"PBO:0081484"}


id: GO:1990508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cyclin-dependent kinase complex which reversibly associates with the Mediator complex. In Saccharomyces cerevisiae it consists of SSN2, SSN3, SSN8 and SRB8.","definition_xrefs":["GOC:bhm","PMID:12200444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0019908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CKM complex","synonyms":[{"name":"CDK8 kinase module","type":"exact"},{"name":"SRB8-SRB11 complex","type":"exact"},{"name":"SRB8/9/10/11 complex","type":"exact"}],"termid":"GO:1990508"}


id: GO:1901668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of superoxide dismutase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of superoxide dismutase activity","synonyms":[{"name":"regulation of Cu,Zn-SOD","type":"related"},{"name":"regulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"regulation of Fe-SOD","type":"related"},{"name":"regulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"regulation of Mn-SOD","type":"related"},{"name":"regulation of SOD","type":"related"},{"name":"regulation of SOD-1","type":"related"},{"name":"regulation of SOD-2","type":"related"},{"name":"regulation of SOD-3","type":"related"},{"name":"regulation of SOD-4","type":"related"},{"name":"regulation of SODF","type":"related"},{"name":"regulation of SODS","type":"related"},{"name":"regulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"regulation of cuprein","type":"related"},{"name":"regulation of cytocuprein","type":"related"},{"name":"regulation of erythrocuprein","type":"related"},{"name":"regulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"regulation of hemocuprein","type":"related"},{"name":"regulation of hepatocuprein","type":"related"},{"name":"regulation of iron superoxide dismutase activity","type":"narrow"},{"name":"regulation of iron superoxide oxidoreductase","type":"related"},{"name":"regulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"regulation of manganese superoxide oxidoreductase","type":"related"},{"name":"regulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"regulation of nickel superoxide oxidoreductase","type":"related"},{"name":"regulation of superoxide dismutase I","type":"related"},{"name":"regulation of superoxide dismutase II","type":"related"},{"name":"regulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"regulation of zinc superoxide oxidoreductase","type":"related"}],"termid":"GO:1901668"}


id: PBO:0061080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK1 homeobox 2","termid":"PBO:0061080"}


id: PBO:0109953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC51 subunit beta","termid":"PBO:0109953"}


id: MONDO:0019695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromelic dysplasia","secondary_identifiers":["UMLS:C4736195","GARD:19194","Orphanet:93436","icd11.foundation:177141175","MEDGEN:1843369"],"termid":"MONDO:0019695","xrefs":{"Monarch":{"xref_id":"0019695"}}}


id: GO:0071963
data:
  {"annotated_genes":["SJAG_04666","SJAG_00236","SJAG_04522","SJAG_00845","SJAG_02536","SJAG_00333","SJAG_00661","SJAG_00596","SJAG_00610","SJAG_04461","SJAG_03637","SJAG_03581","SJAG_04509","SJAG_02022","SJAG_01799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061246"},{"annotations":[107078,116029],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[99667,104826,93243,103187],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[103188],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[94089,95165,99670,104018,112494,118221,90649,104829],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[91934,102334,87415],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a polarized intracellular organization or cell growth patterns that regulate the shape of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"},{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02536":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071963","terms_by_termid":{"GO:0061246":null,"GO:0061361":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: GO:0048379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate specification","termid":"GO:0048337"},{"relation_name":"is_a","term_name":"regulation of lateral mesodermal cell fate specification","termid":"GO:0048378"},{"relation_name":"positively_regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"activation of lateral mesodermal cell fate specification","type":"narrow"},{"name":"positive regulation of lateral plate mesodermal cell fate specification","type":"exact"},{"name":"stimulation of lateral mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"upregulation of lateral mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048379"}


id: MONDO:0859339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, 10","secondary_identifiers":["MEDGEN:1824050","OMIM:620173","UMLS:C5774277"],"termid":"MONDO:0859339","xrefs":{"Monarch":{"xref_id":"0859339"}}}


id: GO:0048070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism.","definition_xrefs":["GOC:jid","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigmentation","termid":"GO:0120305"},{"relation_name":"regulates","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental pigmentation","synonyms":[{"name":"regulation of pigmentation during development","type":"exact"}],"termid":"GO:0048070"}


id: GO:1904524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA amplification.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26195783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA amplification","termid":"GO:1904523"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"DNA amplification","termid":"GO:0006277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA amplification","synonyms":[{"name":"down regulation of DNA amplification","type":"exact"},{"name":"down-regulation of DNA amplification","type":"exact"},{"name":"downregulation of DNA amplification","type":"exact"},{"name":"inhibition of DNA amplification","type":"narrow"}],"termid":"GO:1904524"}


id: PBO:0079088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-1","termid":"PBO:0079088"}


id: FYPO:0007348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 36 of histone H3 is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K36 methylation during vegetative growth","termid":"FYPO:0002918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K36 trimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K36 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K36 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K36me3 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K36 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K36 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007348"}


id: SO:1000171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal deletion whereby three breaks occur in the same chromosome; one central region is lost, and the other is inverted.","definition_xrefs":["FB:reference_manual","SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"deletion","termid":"SO:0000159"},{"relation_name":"has_part","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"},{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deficient_inversion","synonyms":[{"name":"(Drosophila)Df","type":"related"},{"name":"(Drosophila)DfIn","type":"related"},{"name":"deficient inversion","type":"exact"}],"termid":"SO:1000171"}


id: PR:Q10499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An apoptosis-inducing factor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02144","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis-inducing factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.14c","secondary_identifiers":["UniProtKB:Q10499"],"synonyms":[{"name":"Spom972h-AIFM3","type":"exact"}],"termid":"PR:Q10499"}


id: SO:1000011
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of a cytidine to a thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_transition","termid":"SO:1000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_to_T_transition","synonyms":[{"name":"C to T transition","type":"exact"}],"termid":"SO:1000011"}


id: GO:0141201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A inflammatory cell death process associated with the generation of pyrogenic mediators that result from the activation of gasdermins.","definition_xrefs":["PMID:21760595","PMID:33883744","PMID:18846107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"pyroptotic inflammatory response","termid":"GO:0070269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyroptotic cell death","synonyms":[{"name":"pyroptosis","type":"broad"}],"termid":"GO:0141201"}


id: PBO:0088782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoacetylglucosamine mutase","termid":"PBO:0088782"}


id: PBO:0068103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 410","termid":"PBO:0068103"}


id: PBO:0055532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2967","termid":"PBO:0055532"}


id: PBO:0065823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5C, member RAS oncogene family pseudogene 1","termid":"PBO:0065823"}


id: GO:0002340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any B cell selection process that occurs in the bone marrow.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell selection","termid":"GO:0002339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell selection","synonyms":[{"name":"central B lymphocyte selection","type":"exact"},{"name":"central B-cell selection","type":"exact"},{"name":"central B-lymphocyte selection","type":"exact"}],"termid":"GO:0002340"}


id: GO:0003688
data:
  {"annotated_genes":["SJAG_01267","SJAG_02394","SJAG_01762","SJAG_05239","SJAG_02800","SJAG_02348","SJAG_03216","SJAG_03451","SJAG_03927","SJAG_05301"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96829,96935,104952,107306,107515,109683,110841,111094,112623,114555],"is_not":false,"summary":null,"term":"GO:0003688"}]},"cv_name":"molecular_function","definition":"Binding to a DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01267":null,"SJAG_01762":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02800":null,"SJAG_03216":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DNA replication origin binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ARS binding","type":"narrow"}],"termid":"GO:0003688","terms_by_termid":{"GO:0003688":null}}


id: MONDO:0030502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal disorder consisting of the presence of two chromosomes of the same type in addition to the normal diploid number.","direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploidy","termid":"MONDO:0700064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrasomy","secondary_identifiers":["MEDGEN:90710","MESH:D058670","UMLS:C0333689","NCIT:C36601"],"termid":"MONDO:0030502","xrefs":{"Monarch":{"xref_id":"0030502"}}}


id: MONDO:0018737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"antiphospholipid syndrome","termid":"MONDO:8000010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"catastrophic antiphospholipid syndrome","secondary_identifiers":["ICD9:289.81","NANDO:1200270","Orphanet:464343","UMLS:C3662487","MEDGEN:783641","GARD:9820","SCTID:609329007"],"synonyms":[{"name":"CAPS","type":"exact"},{"name":"caps","type":"exact"},{"name":"catastrophic APS","type":"exact"}],"termid":"MONDO:0018737","xrefs":{"Monarch":{"xref_id":"0018737"}}}


id: PBO:0055125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2544","termid":"PBO:0055125"}


id: PBO:0067866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 168","termid":"PBO:0067866"}


id: PBO:0076989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 5 pseudogene 2","termid":"PBO:0076989"}


id: MONDO:0012575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any branchio-oto-renal syndrome in which the cause of the disease is a mutation in the SIX5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchio-oto-renal syndrome","termid":"MONDO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"branchiootorenal syndrome 2","secondary_identifiers":["GARD:15503","DOID:0111424","UMLS:C1970479","OMIM:610896","MEDGEN:410081"],"synonyms":[{"name":"BOR2","type":"related"},{"name":"SIX5 branchio-oto-renal syndrome","type":"exact"},{"name":"branchio-oto-renal syndrome caused by mutation in SIX5","type":"exact"},{"name":"branchiootorenal syndrome 2","type":"exact"},{"name":"branchiootorenal syndrome type 2","type":"exact"}],"termid":"MONDO:0012575","xrefs":{"Monarch":{"xref_id":"0012575"}}}


id: PBO:0028680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_mating-type_region_heterochromatin","termid":"PBO:0028680"}


id: MONDO:0009785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Opsismodysplasia is a skeletal dysplasia characterized by congenital dwarfism and facial dysmorphism.","definition_xrefs":["Orphanet:2746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe spondylodysplastic dysplasia","termid":"MONDO:0800080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsismodysplasia","secondary_identifiers":["UMLS:C0432219","icd11.foundation:2147268863","GARD:4098","MESH:C537122","SCTID:254068007","MEDGEN:140927","OMIM:258480"],"synonyms":[{"name":"OPSISMODYSPLASIA","type":"related"},{"name":"OPSMD","type":"related"},{"name":"opsismodysplasia","type":"exact"}],"termid":"MONDO:0009785","xrefs":{"Monarch":{"xref_id":"0009785"}}}


id: GO:0120146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to sulfatide, also known as 3-O-sulfogalactosylceramide, SM4, or sulfated galactocerebroside. Sulfatide is a class of sulfoglycolipid, which are glycolipids that contain a sulfate group.","definition_xrefs":["PMID:3549017","PMID:22619219","PMID:21525289","PMID:22977233","PMID:29497057","Wikipedia:Sulfatide","GOC:krc","PMID:23574804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid binding","termid":"GO:0051861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"sulfatide binding","synonyms":[{"name":"3-O-sulfogalactosylceramide binding","type":"exact"},{"name":"SM4 binding","type":"exact"},{"name":"sulfated galactocerebroside binding","type":"exact"}],"termid":"GO:0120146"}


id: GO:0018595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-pinene + O2 + 2 H+ + 2 e- = H2O + pinocarveol.","definition_xrefs":["UM-BBD_reactionID:r0716"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-pinene monooxygenase activity (obsolete GO:0018595)","termid":"GO:0018595"}


id: MOD:00459
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 4x(13)C labeled succinyl group.","definition_xrefs":["PubMed:11857757","PubMed:12175151","Unimod:66#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(13)C labeled alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4C13), N-term & K","type":"related"},{"name":"Succinyl:13C(4)","type":"related"}],"termid":"MOD:00459"}


id: PBO:0048471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell nuclear acidic peptidase","termid":"PBO:0048471"}


id: GO:0050038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + xylitol = L-xylulose + H+ + NADPH.","definition_xrefs":["RHEA:17025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-xylulose reductase (NADPH) activity","secondary_identifiers":["MetaCyc:L-XYLULOSE-REDUCTASE-RXN","EC:1.1.1.10","Reactome:R-HSA-5662851","KEGG_REACTION:R01904","Reactome:R-HSA-5661240"],"synonyms":[{"name":"L-xylulose reductase activity","type":"broad"}],"termid":"GO:0050038"}


id: PBO:0062538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 3 pseudogene","termid":"PBO:0062538"}


id: PBO:0057730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1305","termid":"PBO:0057730"}


id: SO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A snoRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_snoRNA_primary_transcript","synonyms":[{"name":"miR encoding snoRNA primary transcript","type":"exact"}],"termid":"SO:0002034"}


id: PBO:0049636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 39","termid":"PBO:0049636"}


id: PR:P56289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif51 gene.","definition_xrefs":["UniProtKB:P56289","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.10c","synonyms":[{"name":"Spom972h-tif51","type":"exact"},{"name":"eIF-5A-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56289"}


id: PBO:0004029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup44","termid":"PBO:0004029"}


id: GO:1904000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eating behavior.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11961051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eating behavior","termid":"GO:1903998"},{"relation_name":"is_a","term_name":"positive regulation of feeding behavior","termid":"GO:2000253"},{"relation_name":"positively_regulates","term_name":"eating behavior","termid":"GO:0042755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eating behavior","synonyms":[{"name":"activation of eating behavior","type":"narrow"},{"name":"activation of eating behaviour","type":"narrow"},{"name":"positive regulation of eating behaviour","type":"exact"},{"name":"up regulation of eating behavior","type":"exact"},{"name":"up regulation of eating behaviour","type":"exact"},{"name":"up-regulation of eating behavior","type":"exact"},{"name":"up-regulation of eating behaviour","type":"exact"},{"name":"upregulation of eating behavior","type":"exact"},{"name":"upregulation of eating behaviour","type":"exact"}],"termid":"GO:1904000"}


id: GO:1901003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fermentation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"negatively_regulates","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fermentation","synonyms":[{"name":"down regulation of fermentation","type":"exact"},{"name":"down-regulation of fermentation","type":"exact"},{"name":"downregulation of fermentation","type":"exact"},{"name":"inhibition of fermentation","type":"narrow"}],"termid":"GO:1901003"}


id: GO:0022407
data:
  {"annotated_genes":["SJAG_00910","SJAG_03473","SJAG_04191","SJAG_01778","SJAG_02380","SJAG_00156","SJAG_00926","SJAG_03484","SJAG_03802","SJAG_01253"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98082,98794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022408"},{"annotations":[105721,103040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060257"},{"annotations":[105366,110826,108217,113528,115588,108094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of a cell to another cell.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01778":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell-cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022407","terms_by_termid":{"GO:0022408":null,"GO:0060257":null,"GO:1900735":null}}


id: GO:0004721
data:
  {"annotated_genes":["SJAG_03631","SJAG_01286","SJAG_04426","SJAG_00600","SJAG_02854","SJAG_01906","SJAG_03482","SJAG_03185","SJAG_03624","SJAG_04332","SJAG_02203","SJAG_00214","SJAG_02389","SJAG_04128","SJAG_02013","SJAG_03126","SJAG_01667","SJAG_02000","SJAG_00823","SJAG_02536","SJAG_01672","SJAG_00082","SJAG_03893","SJAG_03263","SJAG_01187","SJAG_01790","SJAG_04262","SJAG_04166","SJAG_03310","SJAG_02433","SJAG_01161"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89516,92962,94052,99767,102063,103985,111799,112810,113250,114925],"is_not":false,"summary":null,"term":"GO:0004721"},{"annotations":[87372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004741"},{"annotations":[112808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004723"},{"annotations":[112809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033192"},{"annotations":[97127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033549"},{"annotations":[95477,116524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990439"},{"annotations":[91172,94539,103289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033550"},{"annotations":[103290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017017"},{"annotations":[87232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004726"},{"annotations":[95478,113521,95479,89517,92963,99768,106875,98039,109193,96696,109539,116031,97128,114926,113522,111416,88704,116525,103986,116526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004722"},{"annotations":[111800,87565,91173,87233,104688,94540,89518,94053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004725"},{"annotations":[103291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008330"},{"annotations":[91116,93150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008420"},{"annotations":[95342,96697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180007"},{"annotations":[111417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cellular proteins and thereby provide an important mechanism for regulating cellular activity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00214":null,"SJAG_00600":null,"SJAG_00823":null,"SJAG_01161":null,"SJAG_01187":null,"SJAG_01286":null,"SJAG_01667":null,"SJAG_01672":null,"SJAG_01790":null,"SJAG_01906":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02203":null,"SJAG_02389":null,"SJAG_02433":null,"SJAG_02536":null,"SJAG_02854":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03310":null,"SJAG_03482":null,"SJAG_03624":null,"SJAG_03631":null,"SJAG_03893":null,"SJAG_04128":null,"SJAG_04166":null,"SJAG_04262":null,"SJAG_04332":null,"SJAG_04426":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphoprotein phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-113503","Reactome:R-HSA-112383","Reactome:R-HSA-170161","Reactome:R-HSA-174124","Reactome:R-HSA-9636684","Reactome:R-HSA-167072","Reactome:R-HSA-174110","Reactome:R-HSA-170153","Reactome:R-HSA-1363276","Reactome:R-HSA-170158","Reactome:R-HSA-1363274","Reactome:R-HSA-178178","Reactome:R-HSA-2529015","Reactome:R-HSA-69199"],"synonyms":[{"name":"phosphoprotein phosphohydrolase activity","type":"exact"},{"name":"protein phosphatase activity","type":"exact"},{"name":"protein phosphatase-1 activity","type":"narrow"},{"name":"protein phosphatase-2A activity","type":"narrow"},{"name":"protein phosphatase-2B activity","type":"narrow"},{"name":"protein phosphatase-2C activity","type":"narrow"}],"termid":"GO:0004721","terms_by_termid":{"GO:0004721":null,"GO:0004722":null,"GO:0004723":null,"GO:0004725":null,"GO:0004726":null,"GO:0004741":null,"GO:0008330":null,"GO:0008420":null,"GO:0017017":null,"GO:0033192":null,"GO:0033549":null,"GO:0033550":null,"GO:0180005":null,"GO:0180007":null,"GO:1990439":null}}


id: MONDO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplasm usually occurring in infants. It is characterized by the presence of a mixture of melanin-containing epithelial cells and smaller neuroblast-like cells. It may involve the skull and facial bones, or the epididymis. It usually has a benign clinical course.","definition_xrefs":["NCIT:C3717"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"primitive neuroectodermal tumor","termid":"MONDO:0005462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotic neuroectodermal tumor","secondary_identifiers":["DOID:166","ICDO:9363/0","UMLS:C0206094","MEDGEN:60073","MESH:D017600","SCTID:404042005"],"synonyms":[{"name":"MNTI","type":"exact"},{"name":"infantile melanotic neuroectodermal neoplasm","type":"exact"},{"name":"melanotic Progonoma","type":"exact"},{"name":"melanotic neuroectodermal tumor (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumor of infancy","type":"exact"},{"name":"melanotic neuroectodermal tumor of infancy (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumour (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumour of infancy","type":"exact"},{"name":"melanotic neuroectodermal tumour of infancy (morphologic abnormality)","type":"exact"},{"name":"pigmented neuroectodermal tumor","type":"exact"},{"name":"pigmented neuroectodermal tumor of infancy","type":"exact"},{"name":"pigmented neuroectodermal tumour","type":"exact"},{"name":"pigmented neuroectodermal tumour of infancy","type":"exact"},{"name":"retinal anlage neoplasm","type":"exact"}],"termid":"MONDO:0002072","xrefs":{"Monarch":{"xref_id":"0002072"}}}


id: MONDO:0956984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A supratentorial ependymoma that has material basis in YAP1-MAMLD1 fusion.","definition_xrefs":["DOID:0080891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supratentorial ependymoma","termid":"MONDO:0850340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"YAP1-MAMLD1 fusion-positive supratentorial ependymoma","secondary_identifiers":["MEDGEN:1810688","UMLS:C5670480"],"termid":"MONDO:0956984","xrefs":{"Monarch":{"xref_id":"0956984"}}}


id: PBO:0052799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 39","termid":"PBO:0052799"}


id: GO:0033834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + kaempferol = UDP + kaempferol 3-O-beta-D-galactoside.","definition_xrefs":["RHEA:15709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"kaempferol 3-O-galactosyltransferase activity","secondary_identifiers":["EC:2.4.1.234","MetaCyc:2.4.1.234-RXN"],"synonyms":[{"name":"F3GalTase activity","type":"related"},{"name":"UDP-galactose:kaempferol 3-O-beta-D-galactosyltransferase activity","type":"related"}],"termid":"GO:0033834"}


id: PR:O14332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-A2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific cyclin rem1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.17c","secondary_identifiers":["UniProtKB:O14332"],"synonyms":[{"name":"Spom972h-CCNA2","type":"exact"}],"termid":"PR:O14332"}


id: GO:0099076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of cargo from the mitochondrion to the peroxisome, mediated by a mitochondrion-derived vesicle.","definition_xrefs":["GOC:pad","GOC:bc","GOC:PARL-UCL","PMID:20619655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion-derived vesicle mediated transport","termid":"GO:0099075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mitochondrion to peroxisome vesicle-mediated transport","synonyms":[{"name":"mitochondrion to peroxisome transport","type":"exact"}],"termid":"GO:0099076"}


id: SO:0001964
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified guanine DNA base feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_guanine","termid":"SO:0001964"}


id: MONDO:0001429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthropathy that is not permanent.","definition_xrefs":["NCIT:C35761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient arthropathy","secondary_identifiers":["ICD9:716.40","ICD9:716.41","UMLS:C0152083","ICD9:716.48","icd11.foundation:404860910","MEDGEN:101813","DOID:12084","SCTID:66191007"],"synonyms":[{"name":"transient arthropathy involving forearm","type":"narrow"},{"name":"transient arthropathy involving hand","type":"narrow"},{"name":"transient arthropathy involving lower leg","type":"narrow"},{"name":"transient arthropathy involving multiple sites","type":"narrow"},{"name":"transient arthropathy involving pelvic region and thigh","type":"narrow"},{"name":"transient arthropathy involving shoulder region","type":"narrow"},{"name":"transient arthropathy involving upper arm","type":"narrow"}],"termid":"MONDO:0001429","xrefs":{"Monarch":{"xref_id":"0001429"}}}


id: PBO:0048082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 3","termid":"PBO:0048082"}


id: GO:0043761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-digeranylgeranylglycerol + L-serine = archaetidylserine + CMP.","definition_xrefs":["PMID:12562787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016780","GO:0016740"],"is_obsolete":false,"name":"archaetidylserine synthase activity","secondary_identifiers":["EC:2.7.8.38"],"synonyms":[{"name":"CDP-2,3-di-O-geranylgeranyl-sn-glycerol inositol 1-archaetidyltransferase activity","type":"exact"},{"name":"CDP-2,3-di-O-geranylgeranyl-sn-glycerol:l-serine O-archaetidyltransferase activity","type":"exact"}],"termid":"GO:0043761"}


id: SO:0000569
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a feature that occurred as the product of a reverse transcriptase mediated event.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposed","secondary_identifiers":["SO:0100042","http://en.wikipedia.org/wiki/Retrotransposed"],"termid":"SO:0000569"}


id: PBO:0055653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3093","termid":"PBO:0055653"}


id: MONDO:0005671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with organisms of the genus blastocystis. The species B. hominis is responsible for most infections. Parasitologic surveys have generally found small numbers of this species in human stools, but higher positivity rates and organism numbers in aids patients and other immunosuppressed patients (immunocompromised host). Symptoms include abdominal pain; diarrhea; constipation; vomiting; and fatigue.","definition_xrefs":["MESH:D016776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amebiasis","termid":"MONDO:0005644"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Blastocystis infectious disease","secondary_identifiers":["EFO:0007173","SCTID:721809007"],"synonyms":[{"name":"Blastocystis infection","type":"exact"},{"name":"infection, Blastocystis","type":"related"},{"name":"infections, Blastocystis","type":"related"}],"termid":"MONDO:0005671","xrefs":{"Monarch":{"xref_id":"0005671"}}}


id: GO:0032689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon.","definition_xrefs":["GOC:add","GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of type II interferon production","termid":"GO:0032649"},{"relation_name":"negatively_regulates","term_name":"type II interferon production","termid":"GO:0032609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of type II interferon production","secondary_identifiers":["GO:0045077","GO:1902714"],"synonyms":[{"name":"down regulation of interferon-gamma production","type":"exact"},{"name":"down-regulation of interferon-gamma production","type":"exact"},{"name":"downregulation of interferon-gamma production","type":"exact"},{"name":"inhibition of interferon-gamma production","type":"narrow"},{"name":"negative regulation of interferon-gamma biosynthetic process","type":"narrow"},{"name":"negative regulation of interferon-gamma production","type":"exact"},{"name":"negative regulation of interferon-gamma secretion","type":"narrow"}],"termid":"GO:0032689"}


id: PBO:0072838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30BP antisense RNA 1","termid":"PBO:0072838"}


id: MONDO:0000712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete FTDALS (obsolete MONDO:0000712)","termid":"MONDO:0000712","xrefs":{"Monarch":{"xref_id":"0000712"}}}


id: GO:0061086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K27 methylation (obsolete GO:0061086)","termid":"GO:0061086"}


id: MONDO:0007464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Isolated distichiasis is a rare congenital eyelid anomaly characterized by an accessory row of eyelashes (that may be partial or complete) posterior to the normal row of cilia, at or close to the meibomian gland orifices, that is not associated with any other condition, and that may lead to ocular irritation and corneal damage if left untreated.","definition_xrefs":["Orphanet:99177"],"gene_count":0,"genotype_count":0,"name":"obsolete isolated distichiasis (obsolete MONDO:0007464)","secondary_identifiers":["ICD9:743.63","SCTID:95339000","OMIM:126300"],"synonyms":[{"name":"distichiasis","type":"related"},{"name":"eyelashes, two rows of","type":"related"}],"termid":"MONDO:0007464","xrefs":{"Monarch":{"xref_id":"0007464"}}}


id: PBO:0072534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 64","termid":"PBO:0072534"}


id: PBO:0077181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 5","termid":"PBO:0077181"}


id: MONDO:0021657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the ovary and is composed of granulosa cells, Sertoli cells, Leydig cells, theca cells, and fibroblasts. Representative examples include thecoma, fibroma, Sertoli cell tumor, and granulosa cell tumor.","definition_xrefs":["NCIT:C4862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian sex cord-stromal tumor","secondary_identifiers":["MEDGEN:154644","ONCOTREE:SCST","DOID:0080369","UMLS:C0600113"],"synonyms":[{"name":"Sex cord-stromal neoplasm of ovary","type":"exact"},{"name":"Sex cord-stromal neoplasm of the ovary","type":"exact"},{"name":"Sex cord-stromal tumor of ovary","type":"exact"},{"name":"Sex cord-stromal tumor of the ovary","type":"exact"},{"name":"Sex cord-stromal tumour of ovary","type":"exact"},{"name":"Sex cord-stromal tumour of the ovary","type":"exact"},{"name":"ovarian Sex cord-stromal neoplasm","type":"exact"},{"name":"ovarian Sex cord-stromal tumor","type":"exact"},{"name":"ovarian Sex cord-stromal tumour","type":"exact"},{"name":"ovarian sex cord tumor with annular tubules","type":"related"},{"name":"ovarian sex cord tumour with annular tubules","type":"related"},{"name":"ovary sex cord-stromal tumor","type":"exact"},{"name":"ovary sex cord-stromal tumour","type":"exact"},{"name":"sex cord stromal tumor","type":"related"},{"name":"sex cord stromal tumour","type":"related"},{"name":"sex cord-stromal tumor of ovary","type":"exact"},{"name":"sex cord-stromal tumour of ovary","type":"exact"}],"termid":"MONDO:0021657","xrefs":{"Monarch":{"xref_id":"0021657"}}}


id: FYPO:0008291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial DNA present in the cell is higher than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA content increased during vegetative growth","termid":"FYPO:0000158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular mtDNA level","synonyms":[{"name":"increased mitochondrial DNA content","type":"exact"},{"name":"increased mitochondrial DNA copy number","type":"related"},{"name":"increased mitochondrial genome copy number","type":"related"},{"name":"increased mtDNA level","type":"exact"}],"termid":"FYPO:0008291"}


id: PBO:0048191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GA binding protein transcription factor subunit alpha","termid":"PBO:0048191"}


id: GO:0031097
data:
  {"annotated_genes":["SJAG_01277","SJAG_02645","SJAG_01448","SJAG_04462","SJAG_03703","SJAG_00938","SJAG_02831","SJAG_04522","SJAG_04050","SJAG_00773","SJAG_00152","SJAG_04566","SJAG_00118","SJAG_02700","SJAG_05290","SJAG_04666","SJAG_03011","SJAG_03581","SJAG_03119","SJAG_03704","SJAG_03602","SJAG_02838","SJAG_04486","SJAG_00700","SJAG_04375","SJAG_03748","SJAG_03596","SJAG_01732","SJAG_01658","SJAG_01456","SJAG_04001","SJAG_00279","SJAG_03637","SJAG_01143","SJAG_03374","SJAG_04498","SJAG_04703","SJAG_00228","SJAG_03936","SJAG_02241","SJAG_02368","SJAG_01665","SJAG_04982","SJAG_04776","SJAG_02169","SJAG_01964","SJAG_02431","SJAG_00185","SJAG_03564","SJAG_00807","SJAG_03025","SJAG_03088","SJAG_00663","SJAG_04781","SJAG_04280","SJAG_01889"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87051,87663,87981,91829,91922,92042,94081,94868,97143,97219,97391,97415,97929,98396,98818,99394,101255,102148,102546,102734,104611,104812,106353,107073,107591,109969,110206,110246,111314,112492,115618,116471,117308,117328,118069,118306],"is_not":false,"summary":null,"term":"GO:0031097"},{"annotations":[115444,97928,98496,102969],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110115"},{"annotations":[100449,103400,118070,99601,97392,112215,107418,117309,97316,101256],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036391"},{"annotations":[105669,104645,87786,90231,93360,115445,88467,100187,92088,98499,100751,97525,95819,117310,97930,91830,116472],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071341"}]},"cv_name":"cellular_component","definition":"A medial cortical band overlaying the nucleus which acts as a landmark for contractile ring positioning and plays a role in cell cycle regulation.","definition_xrefs":["PMID:15572668","PMID:19474789","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00152":null,"SJAG_00185":null,"SJAG_00228":null,"SJAG_00279":null,"SJAG_00663":null,"SJAG_00700":null,"SJAG_00773":null,"SJAG_00807":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01277":null,"SJAG_01448":null,"SJAG_01456":null,"SJAG_01658":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01889":null,"SJAG_01964":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02368":null,"SJAG_02431":null,"SJAG_02645":null,"SJAG_02700":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03374":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03602":null,"SJAG_03637":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03748":null,"SJAG_03936":null,"SJAG_04001":null,"SJAG_04050":null,"SJAG_04280":null,"SJAG_04375":null,"SJAG_04462":null,"SJAG_04486":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04566":null,"SJAG_04666":null,"SJAG_04703":null,"SJAG_04776":null,"SJAG_04781":null,"SJAG_04982":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"medial cortex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"medial ring","type":"exact"}],"termid":"GO:0031097","terms_by_termid":{"GO:0031097":null,"GO:0036391":null,"GO:0071341":null,"GO:0110115":null}}


id: MONDO:0004506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm that arises in a terminal ductal lobular unit. It is characterized by the presence of a fibrovascular core that is lined by benign epithelial and myoepithelial proliferations. Peripheral breast papillomas are often multiple and are usually found microscopically. Patients are often asymptomatic.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal breast papilloma","termid":"MONDO:0021097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microscopic breast papilloma","secondary_identifiers":["DOID:8225","MEDGEN:233851","NCIT:C36088","UMLS:C1335390"],"synonyms":[{"name":"microscopic breast papilloma","type":"exact"},{"name":"peripheral breast papilloma","type":"exact"}],"termid":"MONDO:0004506","xrefs":{"Monarch":{"xref_id":"0004506"}}}


id: PBO:0062371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 10","termid":"PBO:0062371"}


id: PBO:0043756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 4","termid":"PBO:0043756"}


id: MONDO:0021639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glioma arising from the central nervous system. This category includes diffuse astrocytoma, ependymoma, oligodendroglioma, and oligoastrocytoma.","definition_xrefs":["NCIT:C132505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade glioma","termid":"MONDO:0021637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grade II glioma","secondary_identifiers":["UMLS:C4330050","MEDGEN:1391502"],"synonyms":[{"name":"WHO grade II glioma","type":"exact"},{"name":"grade II glioma","type":"exact"}],"termid":"MONDO:0021639","xrefs":{"Monarch":{"xref_id":"0021639"}}}


id: GO:0106372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + primary fluorescent dioxobilin-type chlorophyll catabolite = H+ + methanol + O13(4)-desmethyl pFCC.","definition_xrefs":["RHEA:67176","PMID:23723324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"primary fluorescent dioxobilin-type chlorophyll catabolite methylesterase activity","termid":"GO:0106372"}


id: PR:O74510
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt3 gene.","definition_xrefs":["UniProtKB:O74510","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.07c","synonyms":[{"name":"Spom972h-bqt3","type":"exact"}],"termid":"PR:O74510"}


id: PBO:0086395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cytochrome b5 reductase, localized to the plasma membrane; may be involved in regulation of lifespan; required for maturation of Gas1p and Pho8p, proposed to be involved in protein trafficking; PGA3 has a paralog, AIM33, that arose from the whole genome duplication","termid":"PBO:0086395"}


id: MONDO:0018696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corticobasal syndrome (CBS) is a rare neurodegenerative disease characterized by multifaceted motor system dysfunctions and cognitive defects such as asymmetric rigidity, bradykinesia, limb apraxia, and visuospatial dysfunction.","definition_xrefs":["Orphanet:454887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"corticobasal syndrome","secondary_identifiers":["DOID:0081392","GARD:13168","MEDGEN:1801322","UMLS:C5575119"],"termid":"MONDO:0018696","xrefs":{"Monarch":{"xref_id":"0018696"}}}


id: MONDO:0007338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft velum is a fissure type embryopathy that affects in varying degrees the soft palate.","definition_xrefs":["Orphanet:99772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft soft palate","secondary_identifiers":["SCTID:253997002","DOID:0110214","MESH:C562950","ICD10CM:Q35.3","OMIM:119570","MEDGEN:98471","icd11.foundation:797497023","UMLS:C0432098","GARD:16907"],"synonyms":[{"name":"cleft soft palate","type":"exact"},{"name":"cleft velum","type":"exact"},{"name":"cleft velum palatinum","type":"exact"},{"name":"soft cleft palate","type":"exact"}],"termid":"MONDO:0007338","xrefs":{"Monarch":{"xref_id":"0007338"}}}


id: GO:0042433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole metabolic process","termid":"GO:0042431"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole catabolic process","synonyms":[{"name":"indole breakdown","type":"exact"},{"name":"indole catabolism","type":"exact"},{"name":"indole degradation","type":"exact"}],"termid":"GO:0042433"}


id: PBO:0066711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 8","termid":"PBO:0066711"}


id: PBO:0036095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_eMTOC","termid":"PBO:0036095"}


id: GO:1905004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of picolinic acid.","definition_xrefs":["GO_REF:0000068","GOC:bf","GOC:PARL","GOC:TermGenie","PMID:19843166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"},{"relation_name":"is_a","term_name":"picolinic acid metabolic process","termid":"GO:1905003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"picolinic acid biosynthetic process","synonyms":[{"name":"picolinate biosynthesis","type":"exact"},{"name":"picolinate biosynthetic process","type":"exact"},{"name":"picolinic acid anabolism","type":"exact"},{"name":"picolinic acid biosynthesis","type":"exact"},{"name":"picolinic acid formation","type":"exact"},{"name":"picolinic acid synthesis","type":"exact"}],"termid":"GO:1905004"}


id: MONDO:0015111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastroesophageal disease (obsolete MONDO:0015111)","secondary_identifiers":["Orphanet:101936"],"termid":"MONDO:0015111","xrefs":{"Monarch":{"xref_id":"0015111"}}}


id: MONDO:0019279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alopecia (obsolete MONDO:0019279)","termid":"MONDO:0019279","xrefs":{"Monarch":{"xref_id":"0019279"}}}


id: GO:1901500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a p-xylene stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to xylene","termid":"GO:1901501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to p-xylene","termid":"GO:1901500"}


id: MONDO:0006566
data:
  {"annotated_genes":["SJAG_01474","SJAG_02698","SJAG_03349","SJAG_03158","SJAG_02488","SJAG_00580","SJAG_00104","SJAG_05011","SJAG_01878","SJAG_03352","SJAG_04865","SJAG_04167","SJAG_04565","SJAG_01938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007048"},{"annotations":[85055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[85547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014131"},{"annotations":[85260,85261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"},{"annotations":[84559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"},{"annotations":[86261,86262,86260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008416"},{"annotations":[86627,86628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"},{"annotations":[85676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013868"},{"annotations":[85538,85539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014713"}]},"cv_name":"mondo","definition":"A skin disorder consisting of hypertrophy of the stratum corneum of the skin.","definition_xrefs":["NCIT:C34745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"keratinization disease","termid":"MONDO:0045011"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00580":null,"SJAG_01474":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02488":null,"SJAG_02698":null,"SJAG_03158":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_04167":null,"SJAG_04565":null,"SJAG_04865":null,"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:9625","UMLS:C0022593","SCTID:254666005","EFO:1000720","DOID:161","MESH:D007642"],"synonyms":[{"name":"keratoderma","type":"exact"}],"termid":"MONDO:0006566","terms_by_termid":{"MONDO:0007048":null,"MONDO:0007858":null,"MONDO:0008293":null,"MONDO:0008416":null,"MONDO:0009440":null,"MONDO:0013868":null,"MONDO:0014131":null,"MONDO:0014713":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0006566"}}}


id: MONDO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the glottic area of the larynx. The vast majority of cases represent squamous cell carcinomas.","definition_xrefs":["NCIT:C3544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"},{"relation_name":"is_a","term_name":"glottis neoplasm","termid":"MONDO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"glottis cancer","secondary_identifiers":["MEDGEN:57560","SCTID:187841006","UMLS:C0153483","DOID:2595","ICD9:161.0"],"synonyms":[{"name":"Ca larynx - glottis","type":"exact"},{"name":"cancer of glottis","type":"exact"},{"name":"glottis cancer","type":"exact"},{"name":"malignant glottis neoplasm","type":"exact"},{"name":"malignant glottis tumor","type":"exact"},{"name":"malignant glottis tumour","type":"exact"},{"name":"malignant neoplasm of glottis","type":"exact"},{"name":"malignant neoplasm of the glottis","type":"exact"},{"name":"malignant tumor of glottis","type":"exact"},{"name":"malignant tumor of the glottis","type":"exact"},{"name":"malignant tumour of glottis","type":"exact"},{"name":"malignant tumour of the glottis","type":"exact"}],"termid":"MONDO:0002351","xrefs":{"Monarch":{"xref_id":"0002351"}}}


id: PBO:0085505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; has apurinic/apyrimidinic (AP) endonuclease activity; essential for viability; nascent Rps3p is bound by specific chaperone Yar1p during translation; homologous to mammalian ribosomal protein S3 and bacterial S3","termid":"PBO:0085505"}


id: PBO:0088274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase and TOR substrate adaptor Sin1","termid":"PBO:0088274"}


id: GO:0099563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modifies the structure/morphology of a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modification of synaptic structure","synonyms":[{"name":"synapse remodelling","type":"exact"}],"termid":"GO:0099563"}


id: PBO:0046161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF2 pseudogene 1","termid":"PBO:0046161"}


id: GO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the molecular signal from the carotid and aortic bodies is relayed to the vasomotor center, causing it to signal an increase arterial pressure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by chemoreceptor signaling","termid":"GO:0001979"},{"relation_name":"part_of","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"excitation of vasomotor center by chemoreceptor signaling","synonyms":[{"name":"excitation of vasomotor center by chemoreceptor signalling","type":"exact"}],"termid":"GO:0002008"}


id: GO:0120176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the torso signaling pathway.","definition_xrefs":["PMID:23732470","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of torso signaling pathway","termid":"GO:0120175"},{"relation_name":"positively_regulates","term_name":"torso signaling pathway","termid":"GO:0008293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of torso signaling pathway","termid":"GO:0120176"}


id: PR:Q9USX2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1921.04c gene.","definition_xrefs":["UniProtKB:Q9USX2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1921.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.04c","synonyms":[{"name":"Spom972h-SPBC1921.04c","type":"exact"}],"termid":"PR:Q9USX2"}


id: GO:0090272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor production","termid":"GO:0090270"},{"relation_name":"negatively_regulates","term_name":"fibroblast growth factor production","termid":"GO:0090269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of fibroblast growth factor production","termid":"GO:0090272"}


id: RO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in organization of c iff p results in the assembly, arrangement of constituent parts, or disassembly of c","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_organization_of","termid":"RO:0002592"}


id: PBO:0048946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 1","termid":"PBO:0048946"}


id: MONDO:0008586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oesophageal atresia (OA) encompasses a group of congenital anomalies with an interruption in the continuity of the esophagus, with or without persistent communication with the trachea.","definition_xrefs":["Orphanet:1199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal atresia/tracheoesophageal fistula","secondary_identifiers":["MedDRA:10021530","MEDGEN:21228","MESH:C531835","NORD:1108","OMIM:189960","SCTID:95435007","MESH:D004933","UMLS:C0040588","DOID:0080171","GARD:6381","icd11.foundation:1582061097","MedDRA:10030146"],"synonyms":[{"name":"Esophageal Atresia and/or Tracheoesophageal Fistula","type":"exact"},{"name":"TEF","type":"related"},{"name":"esophageal atresia and/or tracheoesophageal fistula","type":"exact"},{"name":"esophageal atresia with or without tracheoesophageal fistula","type":"related"},{"name":"te fistula","type":"related"},{"name":"tracheoesophageal fistula","type":"related"},{"name":"tracheoesophageal fistula with or without esohageal atresia","type":"exact"},{"name":"tracheoesophageal fistula with or without esophageal atresia","type":"related"}],"termid":"MONDO:0008586","xrefs":{"Monarch":{"xref_id":"0008586"}}}


id: PBO:0081178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 28","termid":"PBO:0081178"}


id: GO:0005155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor activating ligand activity (obsolete GO:0005155)","synonyms":[{"name":"EGF receptor activating ligand activity","type":"exact"},{"name":"EGFR activating ligand activity","type":"exact"},{"name":"epidermal growth factor receptor activating ligand activity","type":"exact"}],"termid":"GO:0005155"}


id: MONDO:0850097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autoimmune encephalitis involving the mesial temporal lobes and clinically characterized by subacute onset (i. e. rapid progression of less than three months) of short-term memory deficits, seizures or psychiatric symptoms, such as behavioral changes, anxiety, depression, and psychosis. Further diagnostic criteria are bilateral abnormalities restricted to the mesial temporal lobes in brain MRI, cerebrospinal fluid pleocytosis and/or epileptic or slow-wave activity involving the temporal lobes in EEG, and reasonable exclusion of alternative causes. Paraneoplastic or non-paraneoplastic antibodies against neuronal antigens may be found in serum and/or cerebrospinal fluid.","direct_ancestors":[{"relation_name":"is_a","term_name":"limbic encephalitis","termid":"MONDO:0015588"},{"relation_name":"is_a","term_name":"autoimmune encephalitis","termid":"MONDO:0020640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune limbic encephalitis","secondary_identifiers":["GARD:22492","Orphanet:623615","UMLS:C2930824","MEDGEN:419645","icd11.foundation:1254443511"],"termid":"MONDO:0850097","xrefs":{"Monarch":{"xref_id":"0850097"}}}


id: MONDO:0971174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 9b","secondary_identifiers":["OMIM:620887"],"termid":"MONDO:0971174","xrefs":{"Monarch":{"xref_id":"0971174"}}}


id: GO:0004190
data:
  {"annotated_genes":["SJAG_02260","SJAG_00254","SJAG_03763","SJAG_00109","SJAG_01968","SJAG_04583","SJAG_00784","SJAG_03420"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59881,79449,94359,94360,94361,97905,115047],"is_not":false,"summary":null,"term":"GO:0004190"},{"annotations":[94227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042500"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"aspartic-type peptidase activity","termid":"GO:0070001"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00109":null,"SJAG_00254":null,"SJAG_00784":null,"SJAG_01968":null,"SJAG_02260":null,"SJAG_03420":null,"SJAG_03763":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0140096","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"aspartic-type endopeptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2065357","Reactome:R-HSA-9017817","Reactome:R-HSA-2022403","Reactome:R-HSA-2022412","Reactome:R-HSA-157640","Reactome:R-HSA-2220988","Reactome:R-HSA-373705","Reactome:R-HSA-9604294","Reactome:R-HSA-157353","EC:3.4.23.-","Reactome:R-HSA-9013361"],"synonyms":[{"name":"aspartate protease activity","type":"narrow"},{"name":"aspartic endopeptidase activity","type":"exact"},{"name":"aspartic protease activity","type":"narrow"},{"name":"aspartyl protease activity","type":"narrow"},{"name":"carboxyl protease activity","type":"narrow"}],"termid":"GO:0004190","terms_by_termid":{"GO:0004190":null,"GO:0042500":null}}


id: MONDO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the nasal cavity","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"sensory system cancer","termid":"MONDO:0000649"},{"relation_name":"is_a","term_name":"nasal cavity neoplasm","termid":"MONDO:0004756"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity cancer","secondary_identifiers":["NCIT:C4918","ICD9:160.0","DOID:10811","MEDGEN:152601","SCTID:363422006","UMLS:C0728864"],"synonyms":[{"name":"cancer of nasal cavity","type":"exact"},{"name":"malignant nasal cavity neoplasm","type":"exact"},{"name":"malignant nasal cavity tumor","type":"exact"},{"name":"malignant nasal cavity tumour","type":"exact"},{"name":"malignant neoplasm of nasal cavities","type":"exact"},{"name":"malignant neoplasm of nasal cavity","type":"exact"},{"name":"malignant neoplasm of the nasal cavity","type":"exact"},{"name":"malignant tumor of nasal cavity","type":"exact"},{"name":"malignant tumor of the nasal cavity","type":"exact"},{"name":"malignant tumour of nasal cavity","type":"exact"},{"name":"malignant tumour of the nasal cavity","type":"exact"},{"name":"nasal cavity cancer","type":"exact"}],"termid":"MONDO:0001128","xrefs":{"Monarch":{"xref_id":"0001128"}}}


id: FYPO:0006460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal in regions containing protein-coding genes during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:19965387","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at protein coding gene during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at protein coding gene during first meiotic nuclear division","type":"exact"},{"name":"increased histone H2A phosphorylation at protein-coding gene during meiosis I","type":"exact"}],"termid":"FYPO:0006460"}


id: PBO:0028024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle","termid":"PBO:0028024"}


id: FYPO:0004060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which endocytosis does not occur during meiotic interphase II, i.e. the phase between the end of meiosis I cytokinesis the beginning of meiosis II prophase. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["GO:0044844","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished endocytosis during meiotic interphase II","synonyms":[{"name":"abolished actin-mediated endocytosis during meiotic interphase II","type":"exact"},{"name":"abolished protein internalization during meiotic interphase II","type":"narrow"},{"name":"absent endocytosis during meiotic interphase II","type":"exact"},{"name":"endocytosis abolished during meiotic interphase II","type":"exact"}],"termid":"FYPO:0004060"}


id: GO:0015916
data:
  {"annotated_genes":["SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"}]},"cv_name":"biological_process","definition":"The directed movement of fatty acyl coenzyme A into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fatty acyl coenzyme A is an acyl group linked to 3'-phosphoadenosine-(5')diphospho(4')pantatheine (coenzyme A).","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"thioester transport","termid":"GO:1901337"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"fatty-acyl-CoA transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acyl CoA transport","type":"exact"},{"name":"fatty acyl coenzyme A transport","type":"exact"},{"name":"fatty acyl-CoA transport","type":"exact"}],"termid":"GO:0015916","terms_by_termid":{"GO:0035348":null}}


id: GO:0042709
data:
  {"annotated_genes":["SJAG_01524","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114412],"is_not":false,"summary":null,"term":"GO:0042709"},{"annotations":[89425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009361"}]},"cv_name":"cellular_component","definition":"A heterodimeric enzyme complex, usually composed of an alpha and beta chain. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming ATP or GTP.","definition_xrefs":["GOC:jl","PMID:10671455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid cycle heteromeric enzyme complex","termid":"GO:0045239"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"succinate-CoA ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042709","terms_by_termid":{"GO:0009361":null,"GO:0042709":null}}


id: GO:0008379
data:
  {"annotated_genes":["SJAG_02515","SJAG_03166","SJAG_01199","SJAG_00141","SJAG_01216"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69790,94699,104513,108293,116819],"is_not":false,"summary":null,"term":"GO:0008379"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [thioredoxin]-dithiol + hydrogen peroxide = [thioredoxin]-disulfide + H2O.","definition_xrefs":["RHEA:63528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioredoxin-dependent peroxiredoxin activity","termid":"GO:0140824"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_03166":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051920"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824","GO:0051920"],"is_obsolete":false,"name":"thioredoxin peroxidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3697894","GO:0009031","MetaCyc:RXN0-267","Reactome:R-HSA-3322995","Reactome:R-HSA-3341343","Reactome:R-HSA-3697882"],"synonyms":[{"name":"TPx activity","type":"exact"},{"name":"TrxPx activity","type":"exact"},{"name":"thiol peroxidase activity","type":"exact"}],"termid":"GO:0008379","terms_by_termid":{"GO:0008379":null}}


id: PBO:0002890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex SMC subunit Smc5","termid":"PBO:0002890"}


id: PR:O59736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- leu3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-isopropylmalate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.16c","synonyms":[{"name":"Spom972h-leu3","type":"exact"},{"name":"alpha-IPM synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-isopropylmalate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59736"}


id: MONDO:0017026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial lung disease specific to adulthood","secondary_identifiers":["UMLS:C5679743","Orphanet:264735","MEDGEN:1842399"],"synonyms":[{"name":"ILD specific to adulthood","type":"exact"}],"termid":"MONDO:0017026","xrefs":{"Monarch":{"xref_id":"0017026"}}}


id: MONDO:0100109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition comprising a triad of unilateral renal agenesis, ipsilateral seminal vesicle obstruction and ipsilateral ejaculatory duct obstruction.","definition_xrefs":["PMID:30258511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinner syndrome","termid":"MONDO:0100109","xrefs":{"Monarch":{"xref_id":"0100109"}}}


id: PBO:0070321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 10","termid":"PBO:0070321"}


id: GO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein transport process that contributes to protein import into the nucleus, and that results in the vectorial transfer of a cargo-carrier protein complex through the nuclear pore complex from the cytoplasmic side to the nucleoplasmic side of the nuclear envelope.","definition_xrefs":["ISBN:0198506732","PMID:14570049","PMID:9126736","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into nucleus, translocation (obsolete GO:0000060)","synonyms":[{"name":"protein import into cell nucleus, translocation","type":"exact"},{"name":"protein translocation during protein import into nucleus","type":"exact"},{"name":"protein translocation during protein transport from cytoplasm to nucleus","type":"exact"},{"name":"protein translocation during protein-nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus, translocation","type":"exact"},{"name":"protein-nucleus import, translocation","type":"exact"}],"termid":"GO:0000060"}


id: GO:0032618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-15 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-15 production","secondary_identifiers":["GO:0042233","GO:0072613"],"synonyms":[{"name":"IL-15 production","type":"exact"},{"name":"interleukin-15 biosynthetic process","type":"narrow"},{"name":"interleukin-15 secretion","type":"narrow"}],"termid":"GO:0032618"}


id: MOD:00693
data:
  {"annotated_genes":["SJAG_01488","SJAG_04819","SJAG_03009"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80058,80059,80060,80061,80062,80063,80064,80199,80200,80201,80202,80203,80206,80207,80208,80209,80210,80211],"is_not":false,"summary":null,"term":"MOD:00693"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01488":null,"SJAG_03009":null,"SJAG_04819":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"glycosylated residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"GlycoRes","type":"exact"}],"termid":"MOD:00693","terms_by_termid":{"MOD:00693":null}}


id: PBO:0040405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 6","termid":"PBO:0040405"}


id: PBO:0075168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein D2 pseudogene 2","termid":"PBO:0075168"}


id: GO:0048613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, by which the anatomical structures of the ectodermal digestive tract are generated and organized.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic digestive tract morphogenesis","termid":"GO:0048557"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"},{"relation_name":"part_of","term_name":"embryonic ectodermal digestive tract development","termid":"GO:0048611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic ectodermal digestive tract morphogenesis","synonyms":[{"name":"embryonic ectodermal gut morphogenesis","type":"related"}],"termid":"GO:0048613"}


id: GO:0098865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or temporarily subverts the tight cell-cell junctions between cells of the host. Tight cell-cell junctions, a cell-cell junction that seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.","definition_xrefs":["PMID:24287273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cell-cell junction","termid":"GO:0044067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host tight cell-cell junction","synonyms":[{"name":"disruption by symbiont of host tight cell-cell junction","type":"exact"},{"name":"disruption of host tight cell-cell junction","type":"broad"},{"name":"modification by symbiont of host bicellular tight junctions","type":"related"},{"name":"symbiont-mediated disruption of host tight cell-cell junction","type":"related"}],"termid":"GO:0098865"}


id: MONDO:0008132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leber plus disease","termid":"MONDO:0020478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"optic atrophy with demyelinating disease of CNS","secondary_identifiers":["DOID:0111756","GARD:15098","MESH:C563496","MEDGEN:322290","OMIM:165200","UMLS:C1833830"],"synonyms":[{"name":"optic atrophy with demyelinating disease of CNS","type":"exact"}],"termid":"MONDO:0008132","xrefs":{"Monarch":{"xref_id":"0008132"}}}


id: GO:0070530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination formed by linkages between lysine residues at position 63 in the target protein.","definition_xrefs":["GOC:mah","PMID:15556404","PMID:17525341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyubiquitin modification-dependent protein binding","termid":"GO:0031593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"K63-linked polyubiquitin modification-dependent protein binding","termid":"GO:0070530"}


id: PBO:0034475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidylethanolamine_level","termid":"PBO:0034475"}


id: PBO:0061944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily S member 1","termid":"PBO:0061944"}


id: PBO:0046512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 6","termid":"PBO:0046512"}


id: PBO:0036540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain Rab GDP-GTP exchange factor, unknown biological role (predicted)","termid":"PBO:0036540"}


id: PBO:0042109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 182","termid":"PBO:0042109"}


id: GO:0042349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The orientation of free radical substrates in such a way that only a particular stereoisomer is synthesized by an enzyme. Best characterized as a function during lignan biosynthesis.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"guiding stereospecific synthesis activity","synonyms":[{"name":"dirigent protein","type":"narrow"}],"termid":"GO:0042349"}


id: MOD:01463
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-methionine alpha amino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated methionine","termid":"MOD:00716"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated methionine","termid":"MOD:01463"}


id: SO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is part of a transposable element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"},{"relation_name":"part_of","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_CDS","synonyms":[{"name":"transposable element CDS","type":"exact"}],"termid":"SO:0001896"}


id: PBO:0028620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribonucleoprotein_complex_binding","termid":"PBO:0028620"}


id: PBO:0064491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I and III subunit D","termid":"PBO:0064491"}


id: PBO:0047125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 168 member B","termid":"PBO:0047125"}


id: MONDO:0007176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Helicoid peripapillary chorioretinal degeneration is a rare autosomal dominantly inherited chorioretinal degeneration disease, presenting at birth or infancy, characterized by progressive bilateral retinal and choroidal atrophy, appearing as lesions on the optic nerve and peripheral ocular fundus and leading to central vision loss. Congenital anterior polar cataracts are sometimes associated with this disease.","definition_xrefs":["Orphanet:86813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"helicoid peripapillary chorioretinal degeneration","secondary_identifiers":["GARD:16757","MEDGEN:354733","OMIM:108985","icd11.foundation:896652469","DOID:0111228","SCTID:724384008","MESH:C566236","UMLS:C1862382"],"synonyms":[{"name":"SCRA","type":"exact"},{"name":"SVEINSSON chorioretinal atrophy","type":"related"},{"name":"Sveinsson chorioretinal atrophy","type":"exact"},{"name":"atrophia areata","type":"exact"},{"name":"helicoidal peripapillary chorioretinal Degeneration","type":"related"},{"name":"peripapillary chorioretinal Degeneration, Icelandic type","type":"related"}],"termid":"MONDO:0007176","xrefs":{"Monarch":{"xref_id":"0007176"}}}


id: PBO:0061715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2A","termid":"PBO:0061715"}


id: PBO:0090868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase Trm12","termid":"PBO:0090868"}


id: PBO:0087650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterodimeric FACT complex (Spt16p-Pob3p); FACT associates with chromatin via interaction with Nhp6Ap and Nhp6Bp, and reorganizes nucleosomes to facilitate access to DNA by RNA and DNA polymerases; protein abundance increases in response to DNA replication stress","termid":"PBO:0087650"}


id: MONDO:0006990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intraocular infection caused mainly by pus-producing bacteria and rarely by fungi. The infection may be caused by an injury or surgical wound (exogenous) or by endogenous septic emboli in such diseases as bacterial endocarditis or meningococcemia.","definition_xrefs":["MESH:D015829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveitis","termid":"MONDO:0020283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"suppurative uveitis","secondary_identifiers":["MEDGEN:22598","UMLS:C0042168","DOID:13140"],"termid":"MONDO:0006990","xrefs":{"Monarch":{"xref_id":"0006990"}}}


id: PATO:0002453
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer bring gradually worn away.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eroding","termid":"PATO:0002453"}


id: GO:1905132
data:
  {"annotated_genes":["SJAG_03327","SJAG_01082","SJAG_00145","SJAG_01515","SJAG_01330","SJAG_04259","SJAG_04126","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113941,105785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[116112,101287,105786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[98198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[113226],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[94660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[100826],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic chromosome separation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15620645","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome separation","termid":"GO:1905818"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of meiotic chromosome separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromosome separation during meiosis","type":"exact"},{"name":"regulation of meiotic chromosome resolution","type":"exact"}],"termid":"GO:1905132","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0061656
data:
  {"annotated_genes":["SJAG_00604","SJAG_02082"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95712,103962],"is_not":false,"summary":null,"term":"GO:0061656"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of SUMO from one protein to another via the reaction X-SUMO + Y = Y-SUMO + X, where both the X-SUMO and Y-SUMO linkages are thioester bonds between the C-terminal amino acid of SUMO and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO transferase activity","termid":"GO:0019789"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_02082":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0140096","GO:0016740","GO:0019787"],"is_obsolete":false,"name":"SUMO conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061656","terms_by_termid":{"GO:0061656":null}}


id: PBO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional enzyme","termid":"PBO:0003273"}


id: PBO:0110814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA-type, amino acid sensing","termid":"PBO:0110814"}


id: MONDO:0016413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"transient congenital hypothyroidism due to maternal factor","termid":"MONDO:0016555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism due to maternal intake of antithyroid drugs","secondary_identifiers":["GARD:20563","MEDGEN:1673658","Orphanet:226313","UMLS:C5190849"],"termid":"MONDO:0016413","xrefs":{"Monarch":{"xref_id":"0016413"}}}


id: PBO:0088571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase, zeta subunit Rev7","termid":"PBO:0088571"}


id: PBO:0003531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tspO homolog/ peripheral benzodiazepine receptor homolog, involved in the transport cytoplas/mitochondrial of haem (predicted)","termid":"PBO:0003531"}


id: MONDO:0015783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi syndrome due to paternal 15q11q13 deletion","termid":"MONDO:0020301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0700092"],"is_obsolete":false,"name":"Prader-Willi syndrome due to paternal deletion of 15q11q13 type 1","secondary_identifiers":["Orphanet:177901","UMLS:C5680507","GARD:20138","MEDGEN:1826083","DECIPHER:14"],"synonyms":[{"name":"Prader-Willi syndrome (Type 1)","type":"exact"}],"termid":"MONDO:0015783","xrefs":{"Monarch":{"xref_id":"0015783"}}}


id: PBO:0062999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 6","termid":"PBO:0062999"}


id: GO:0039512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host protein tyrosine kinase activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protein tyrosine kinase activity (obsolete GO:0039512)","synonyms":[{"name":"down-regulation by virus of host protein tyrosine kinase activity","type":"exact"},{"name":"downregulation by virus of host protein tyrosine kinase activity","type":"exact"},{"name":"inhibition by virus of host protein tyrosine kinase activity","type":"narrow"},{"name":"negative regulation by virus of host protein tyrosine kinase activity","type":"exact"}],"termid":"GO:0039512"}


id: GO:0003149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the membranous septum is generated and organized. The membranous septum is the upper part of ventricular septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"ventricular septum morphogenesis","termid":"GO:0060412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membranous septum morphogenesis","termid":"GO:0003149"}


id: MONDO:0002558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare circumscribed, non-encapsulated and grossly pigmented nerve sheath tumor. It is composed of cells with the immunophenotypic and electron microscopic features of Schwann cells which contain melanosomes and are positive for melanoma markers. It usually involves spinal nerve roots but may occur in other locations. It may be associated with PRKAR1A gene mutation and Carney complex. Malignant behavior has been reported in a significant number of patients.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotic neurilemmoma","secondary_identifiers":["MEDGEN:266292","NCIT:C6970","ONCOTREE:MSCHW","SCTID:404024000","UMLS:C1306247","DOID:3205","ICD9:215.8"],"synonyms":[{"name":"MSCHW","type":"related"},{"name":"melanocytic neurilemmoma","type":"exact"},{"name":"melanocytic schwannoma","type":"exact"},{"name":"melanotic neurinoma","type":"exact"},{"name":"melanotic schwannoma","type":"exact"},{"name":"melanotic schwannoma (morphologic abnormality)","type":"exact"},{"name":"pigmented neurilemmoma","type":"exact"},{"name":"pigmented schwannoma","type":"exact"}],"termid":"MONDO:0002558","xrefs":{"Monarch":{"xref_id":"0002558"}}}


id: MONDO:0003852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature teratoma that arises from the ovary and presents as a large solid mass. It contains multiple cysts that vary in size. Small foci of hemorrhage are also present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature ovarian teratoma","termid":"MONDO:0003820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian solid teratoma","secondary_identifiers":["DOID:6315","MEDGEN:233810","NCIT:C7285","UMLS:C1335181"],"termid":"MONDO:0003852","xrefs":{"Monarch":{"xref_id":"0003852"}}}


id: PBO:0048270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT7 divergent transcript","termid":"PBO:0048270"}


id: PBO:0089938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane phospholipid-translocating ATPase complex Lem3 family subunit Ivn1","termid":"PBO:0089938"}


id: PBO:0025535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein ortholog Tma22 (predicted)","termid":"PBO:0025535"}


id: FYPO:0000627
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118598,118599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[118591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[118676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[118975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[118926,118929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000579"},{"annotations":[118925,118928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"},{"annotations":[118589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype","termid":"FYPO:0000114"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01143":null,"SJAG_01355":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null,"SJAG_04883":null},"genotype_count":7,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03118","SJAG_03689"],"name":"normal cellular process","references_by_uniquename":{"PMID:25866389":null,"PMID:35226668":null,"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_03689","SJAG_04883","SJAG_00601","SJAG_01355","SJAG_01143"],"single_locus_genotype_uniquenames":["cox6delta","dcr1delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","ptp4delta","rip1delta"],"termid":"FYPO:0000627","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000579":null,"FYPO:0000590":null,"FYPO:0000596":null,"FYPO:0000644":null,"FYPO:0001007":null,"FYPO:0006989":null,"FYPO_EXT:0000001":null}}


id: GO:0019912
data:
  {"annotated_genes":["SJAG_01000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91650],"is_not":false,"summary":null,"term":"GO:0019912"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; increases the activity of a cyclin-dependent protein kinase (CDK).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"protein kinase activator activity","termid":"GO:0030295"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0030234","GO:0004672","GO:0016740","GO:0140096","GO:0003824","GO:0098772","GO:0003674","GO:0140677","GO:0016301"],"is_obsolete":false,"name":"cyclin-dependent protein kinase activating kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019913"],"synonyms":[{"name":"CAK","type":"exact"},{"name":"cdk-activating kinase activity","type":"exact"},{"name":"cyclin-dependent protein kinase activating kinase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0019912","terms_by_termid":{"GO:0019912":null}}


id: PBO:0060962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFS1 cysteine desulfurase","termid":"PBO:0060962"}


id: PBO:0073504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 3","termid":"PBO:0073504"}


id: PBO:0089585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA splicing","termid":"PBO:0089585"}


id: MONDO:0001138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A angiodysplasia that involves the intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiodysplasia","termid":"MONDO:0002322"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"angiodysplasia of intestine","secondary_identifiers":["DOID:10846","MEDGEN:540621","ICD9:569.84","SCTID:235853006","ICD9:569.85","UMLS:C0267367"],"synonyms":[{"name":"intestine angiodysplasia","type":"exact"}],"termid":"MONDO:0001138","xrefs":{"Monarch":{"xref_id":"0001138"}}}


id: PBO:0072033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 3","termid":"PBO:0072033"}


id: PBO:0043567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 4 pseudogene 2","termid":"PBO:0043567"}


id: PR:Q9P7R9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor SYF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03889","PANTHER:PTHR11246:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.02c","secondary_identifiers":["UniProtKB:Q9P7R9"],"synonyms":[{"name":"Spom972h-XAB2","type":"exact"},{"name":"complexed with cdc5 protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7R9"}


id: PBO:0087870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional co-activator that regulates mating-type-specific genes; targets the transcription factor Mcm1p to the promoters of alpha-specific genes; one of two genes encoded by the MATalpha mating type cassette","termid":"PBO:0087870"}


id: PR:Q9P7M7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P27G11.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.11c","synonyms":[{"name":"Spom972h-SPAP27G11.11c","type":"exact"}],"termid":"PR:Q9P7M7"}


id: MONDO:0009162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ellis-van Creveld syndrome (EVC) is a skeletal and ectoderlam dysplasia characterized by a tetrad of short stature, postaxial polydactyly, ectodermal dysplasia, and congenital heart defects.","definition_xrefs":["Orphanet:289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025","MONDO:0005267","MONDO:0005093"],"is_obsolete":false,"name":"Ellis-van Creveld syndrome","secondary_identifiers":["OMIM:225500","MedDRA:10008724","UMLS:C0013903","DOID:12714","ICD9:756.55","MEDGEN:8584","GARD:1301","NCIT:C84684","NORD:1083","SCTID:62501005","MESH:D004613"],"synonyms":[{"name":"Chondroectodermal dysplasia","type":"exact"},{"name":"EVC","type":"exact"},{"name":"Ellis Van Creveld Syndrome","type":"exact"},{"name":"Ellis Van Creveld syndrome","type":"exact"},{"name":"Ellis-VAN Creveld syndrome","type":"exact"},{"name":"Ellis-van Creveld syndrome","type":"exact"},{"name":"Mesoectodermal dysplasia","type":"exact"},{"name":"mesodermic dysplasia","type":"exact"}],"termid":"MONDO:0009162","xrefs":{"Monarch":{"xref_id":"0009162"}}}


id: PBO:0054131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1497","termid":"PBO:0054131"}


id: MONDO:0004965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the acinar cell","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"acinar cell carcinoma","secondary_identifiers":["EFO:0000216","ONCOTREE:ACCC","NCIT:C3768","UMLS:C0206685","MEDGEN:61660","DOID:3025","ICDO:8550/3","MESH:D018267","icd11.foundation:1322159869"],"synonyms":[{"name":"ACCC","type":"related"},{"name":"acinar adenocarcinoma","type":"exact"},{"name":"acinar carcinoma","type":"exact"},{"name":"acinar cell adenocarcinoma","type":"exact"},{"name":"acinar cell carcinoma","type":"exact"},{"name":"acinar cell carcinoma (morphologic abnormality)","type":"exact"},{"name":"acinic cell adenocarcinoma","type":"exact"},{"name":"acinic cell carcinoma","type":"exact"},{"name":"acinic cell tumor","type":"related"},{"name":"acinic cell tumour","type":"related"},{"name":"carcinoma of acinar cell","type":"exact"},{"name":"carcinoma, acinar cell, malignant","type":"exact"}],"termid":"MONDO:0004965","xrefs":{"Monarch":{"xref_id":"0004965"}}}


id: PBO:0047885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q21)","termid":"PBO:0047885"}


id: PBO:0003823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol 24-C-methyltransferase Erg6","termid":"PBO:0003823"}


id: PBO:0043319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLIP1 antisense RNA 1","termid":"PBO:0043319"}


id: PATO:0002512
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer flowing or coming together with another entity.","definition_xrefs":["Merriam-Webster:confluent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"confluent with","termid":"PATO:0002512"}


id: PBO:0059319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 2","termid":"PBO:0059319"}


id: PBO:0088884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II accessory factor, Cdc73 family","termid":"PBO:0088884"}


id: PBO:0061914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 2","termid":"PBO:0061914"}


id: PBO:0039021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartylglucosaminidase","termid":"PBO:0039021"}


id: PBO:0001032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk4/ sensor for unfolded proteins in the ER (predicted)","termid":"PBO:0001032"}


id: GO:2000240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA export from nucleus","termid":"GO:0046833"},{"relation_name":"is_a","term_name":"positive regulation of ribonucleoprotein complex localization","termid":"GO:2000199"},{"relation_name":"is_a","term_name":"regulation of tRNA export from nucleus","termid":"GO:2000238"},{"relation_name":"positively_regulates","term_name":"tRNA export from nucleus","termid":"GO:0006409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"positive regulation of tRNA export from nucleus","synonyms":[{"name":"positive regulation of tRNA export from cell nucleus","type":"exact"},{"name":"positive regulation of tRNA export out of nucleus","type":"exact"},{"name":"positive regulation of tRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of tRNA-nucleus export","type":"exact"}],"termid":"GO:2000240"}


id: FYPO:0003190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule depolymerization, i.e. the removal of tubulin dimers from a cytoplasmic microtubule during interphase of the mitotic cell cycle, occurs at a lower rate, or speed, than normal.","definition_xrefs":["GO:0007019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of cytoplasmic microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased interphase microtubule depolymerization rate","type":"exact"},{"name":"decreased rate of cytoplasmic microtubule depolymerization during mitotic interphase","type":"exact"},{"name":"decreased rate of interphase cytoplasmic microtubule depolymerization","type":"exact"},{"name":"decreased rate of interphase microtubule catastrophe","type":"related"},{"name":"decreased rate of interphase microtubule depolymerisation","type":"exact"},{"name":"decreased rate of interphase microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased rate of interphase microtubule depolymerization during vegetative growth","type":"exact"},{"name":"decreased rate of interphase microtubule shrinkage","type":"related"},{"name":"increased interphase microtubule stability","type":"related"},{"name":"reduced rate of interphase microtubule depolymerization","type":"exact"}],"termid":"FYPO:0003190"}


id: PR:O60080
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX56 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.06c","secondary_identifiers":["UniProtKB:O60080"],"synonyms":[{"name":"Spom972h-DDX56","type":"exact"}],"termid":"PR:O60080"}


id: GO:0072460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether recombination is complete is received and converted into a molecular signal, contributing to a meiotic recombination checkpoint.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in meiotic recombination checkpoint (obsolete GO:0072460)","synonyms":[{"name":"meiotic recombination checkpoint sensor mechanism","type":"related"},{"name":"meiotic recombination checkpoint sensor process","type":"related"},{"name":"sensing involved in meiotic recombination checkpoint","type":"related"}],"termid":"GO:0072460"}


id: MONDO:0020672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by occlusion of blood vessels. It differs from thrombosis in that it can be used to describe any form of blockage, not just one formed by a clot.","definition_xrefs":["Wikipedia:Vascular_occlusion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular occlusion disorder","synonyms":[{"name":"vascular occlusion","type":"exact"}],"termid":"MONDO:0020672","xrefs":{"Monarch":{"xref_id":"0020672"}}}


id: PBO:0071929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 6","termid":"PBO:0071929"}


id: PBO:0065057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 11","termid":"PBO:0065057"}


id: PBO:0038753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 3","termid":"PBO:0038753"}


id: PBO:0040176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartoacylase","termid":"PBO:0040176"}


id: MONDO:0015833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudounicornuate uterus is a rare, non-syndromic uterovaginal malformation characterized by a crescent-shaped, small-sized uterus containing a single horn and fallopian tube associated with a rudimentary second horn (which can be solid or contain a cavity with functioning endometrium and be communicating or non-communicating). Urinary tract anomalies are frequently associated.","definition_xrefs":["Orphanet:180079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unilateral aplasia of the mullerian ducts","termid":"MONDO:0015831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudounicornuate uterus","secondary_identifiers":["MEDGEN:1657403","UMLS:C4749300","GARD:20175"],"synonyms":[{"name":"incomplete unilateral Mullerian aplasia","type":"exact"},{"name":"incomplete unilateral Müllerian aplasia","type":"exact"},{"name":"incomplete unilateral aplasia of the Mullerian ducts","type":"exact"},{"name":"incomplete unilateral aplasia of the Müllerian ducts","type":"exact"},{"name":"unicornuate uterus with rudimentary horn","type":"exact"}],"termid":"MONDO:0015833","xrefs":{"Monarch":{"xref_id":"0015833"}}}


id: PBO:0084699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial glutamyl-tRNA synthetase; predicted to be palmitoylated","termid":"PBO:0084699"}


id: MONDO:0042982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder arising from deficiency in the GATA2 with a wide spectrum of phenotypes. Autosomal dominant mutations of GATA2 cause a haploinsufficiency, which, in consequence, cause individuals to develop hematological, immunological, lymphatic, or other presentations. These often progress to severe organ (e.g. lung) failure, opportunistic infections, myelodysplastic syndrome, and/or acute myeloid leukemia. The most common clinical denominator is the propensity for myeloid neoplasia (myelodysplastic syndrome [MDS], myeloproliferative neoplasms [MPN], chronic myelomonocytic leukemia [CMML], acute myeloid leukemia [AML]).","definition_xrefs":["PMID:25619630","PMID:25397911","PMID:28637621","PMID:25624456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"GATA2 deficiency with susceptibility to MDS/AML","secondary_identifiers":["NCIT:C126349"],"synonyms":[{"name":"GATA2 deficiency","type":"exact"},{"name":"GATA2 deficiency with susceptibility to MDS/AML","type":"exact"},{"name":"GATA2 deficiency/MonoMac syndrome","type":"narrow"}],"termid":"MONDO:0042982","xrefs":{"Monarch":{"xref_id":"0042982"}}}


id: GO:0072049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the comma-shaped body is generated and organized. The comma-shaped body is the precursor structure to the S-shaped body that contributes to the morphogenesis of the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"comma-shaped body morphogenesis","termid":"GO:0072049"}


id: FYPO:0006570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UV-damage excision repair is normal (i.e. indistinguishable from wild type). UV-damage excision repair is a DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site, and that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PomBase:mah","GO:0070914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal UV-damage excision repair","synonyms":[{"name":"normal UV-damage excision repair during mitotic cell cycle","type":"related"},{"name":"normal UV-damage excision repair during vegetative growth","type":"exact"}],"termid":"FYPO:0006570"}


id: PBO:0076721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichohyalin like 1","termid":"PBO:0076721"}


id: MOD:01563
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01563"}


id: PBO:0059120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPC1 divergent transcript","termid":"PBO:0059120"}


id: GO:0071830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a triglyceride-rich lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"triglyceride-rich lipoprotein particle clearance","termid":"GO:0071830"}


id: PBO:0087781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIII of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain","termid":"PBO:0087781"}


id: PBO:0041110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 3","termid":"PBO:0041110"}


id: PBO:0062955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 like 2A","termid":"PBO:0062955"}


id: FYPO:0001362
data:
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vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild 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id: PBO:0070666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 37","termid":"PBO:0070666"}


id: GO:0097709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to growth of connective tissue when loss of tissues that are incapable of regeneration occurs, or when fibrinous exudate cannot be adequately cleared.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:bc","PMID:25590961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connective tissue replacement","termid":"GO:0097709"}


id: PR:Q10368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22E12.18 gene.","definition_xrefs":["UniProtKB:Q10368","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22E12.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.18","synonyms":[{"name":"Spom972h-SPAC22E12.18","type":"exact"}],"termid":"PR:Q10368"}


id: PBO:0055781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LONRF2 pseudogene 1","termid":"PBO:0055781"}


id: MONDO:0015257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sino-auricular heart block","secondary_identifiers":["Orphanet:1260"],"termid":"MONDO:0015257","xrefs":{"Monarch":{"xref_id":"0015257"}}}


id: GO:0055097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of high density lipoprotein particle.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle mediated signaling","termid":"GO:0055095"},{"relation_name":"part_of","term_name":"cellular response to high density lipoprotein particle stimulus","termid":"GO:0071403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"high density lipoprotein particle mediated signaling","synonyms":[{"name":"high density lipoprotein mediated signalling","type":"exact"},{"name":"high density lipoprotein particle mediated signal transduction","type":"exact"},{"name":"high density lipoprotein particle-mediated signaling","type":"exact"}],"termid":"GO:0055097"}


id: GO:0086074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an Purkinje myocyte to a ventricular cardiac muscle cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"Purkinje myocyte to ventricular cardiac muscle cell communication","termid":"GO:0086068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"Purkinje myocyte-ventricular cardiac muscle cell adhesion involved in cell communication","termid":"GO:0086074"}


id: PR:Q9P4X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A beta-soluble NSF attachment protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicular-fusion protein sec17 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.02","secondary_identifiers":["UniProtKB:Q9P4X4"],"synonyms":[{"name":"Spom972h-NAPB","type":"exact"}],"termid":"PR:Q9P4X4"}


id: PBO:0035958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0035958"}


id: GO:0032786
data:
  {"annotated_genes":["SJAG_03061","SJAG_03967","SJAG_02057","SJAG_01149","SJAG_01151","SJAG_01213","SJAG_02551","SJAG_03118","SJAG_00150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108332,110366],"is_not":false,"summary":null,"term":"GO:0032786"},{"annotations":[104837,114740,108493,116439,95309,102542,105510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription elongation","termid":"GO:0032784"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"positively_regulates","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_02551":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"positive regulation of DNA-templated transcription, elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of RNA elongation","type":"broad"},{"name":"positive regulation of DNA-dependent transcription, elongation","type":"exact"},{"name":"positive regulation of transcription elongation","type":"broad"},{"name":"positive regulation of transcription elongation, DNA-dependent","type":"exact"},{"name":"positive regulation of transcriptional elongation","type":"broad"},{"name":"positive transcription elongation regulator activity","type":"related"},{"name":"stimulation of RNA elongation","type":"broad"},{"name":"up regulation of RNA elongation","type":"broad"},{"name":"up-regulation of RNA elongation","type":"broad"},{"name":"upregulation of RNA elongation","type":"broad"}],"termid":"GO:0032786","terms_by_termid":{"GO:0032786":null,"GO:0032968":null}}


id: PBO:0089729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1","termid":"PBO:0089729"}


id: PBO:0110040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAA40 pseudogene 1","termid":"PBO:0110040"}


id: PBO:0085647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic recombination; required for normal levels of crossing over, colocalizes with Zip2p to discrete foci on meiotic chromosomes, has homology to bacterial MutS protein","termid":"PBO:0085647"}


id: GO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a natural killer cell progenitor.","definition_xrefs":["PMID:16551264","PMID:16551251","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell progenitor differentiation","termid":"GO:0002321"}


id: PBO:0090230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBS and PB1 domain protein, conserved in fungi and plants, implicated in signalling Mug70","termid":"PBO:0090230"}


id: PBO:0061309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 1","termid":"PBO:0061309"}


id: GO:0052047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with a second organism mediated by a substance secreted by the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiotic process mediated by secreted substance (obsolete GO:0052047)","synonyms":[{"name":"interaction with other organism via secreted substance during symbiotic interaction","type":"related"},{"name":"interaction with other organism via secreted substance involved in symbiotic interaction","type":"related"}],"termid":"GO:0052047"}


id: PBO:0029368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029368"}


id: PBO:0026760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_cellular_response_to_UV","termid":"PBO:0026760"}


id: PBO:0078171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-2","termid":"PBO:0078171"}


id: PBO:0047633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat storage inducing transmembrane protein 2","termid":"PBO:0047633"}


id: GO:0039594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any endoribonuclease activity that contributes to the viral-induced catabolism of host mRNA.","definition_xrefs":["PMID:22046136","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete endoribonuclease activity involved in viral induction of host mRNA catabolic process (obsolete GO:0039594)","termid":"GO:0039594"}


id: PBO:0061984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 3","termid":"PBO:0061984"}


id: GO:0036441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantolactone + NADP+ = 2-dehydropantolactone + NADPH + H+.","definition_xrefs":["RHEA:18981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-dehydropantolactone reductase activity","secondary_identifiers":["KEGG_REACTION:R03155"],"termid":"GO:0036441"}


id: GO:0097072
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 3.","definition_xrefs":["PMID:12855817","PMID:14556004","GOC:cna"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon regulatory factor complex","termid":"GO:0097071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interferon regulatory factor 3 complex","synonyms":[{"name":"IRF3:IRF3 complex","type":"exact"}],"termid":"GO:0097072"}


id: MONDO:0010300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 53","secondary_identifiers":["UMLS:C1845889","DOID:0112047","GARD:22672","MEDGEN:335296","OMIM:300324","MESH:C564533"],"synonyms":[{"name":"MRX53","type":"exact"},{"name":"intellectual disability, X-linked 53","type":"exact"},{"name":"mental retardation, X-linked 53","type":"related"},{"name":"mental retardation, X-linked 53, X-linked recessive","type":"exact"}],"termid":"MONDO:0010300","xrefs":{"Monarch":{"xref_id":"0010300"}}}


id: PBO:0082686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the GARP (Golgi-associated retrograde protein) complex; GARP is required for the recycling of proteins from endosomes to the late Golgi, and for mitosis after DNA damage induced checkpoint arrest; links the (VFT/GARP) complex to the SNARE Tlg1p; members of the GARP complex are Vps51p-Vps52p-Vps53p-Vps54p","termid":"PBO:0082686"}


id: GO:0019633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of shikimate, (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate, the anion of shikimic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shikimate metabolic process","termid":"GO:0019632"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"shikimate catabolic process","secondary_identifiers":["MetaCyc:SHIKIMATEDEG-PWY"],"synonyms":[{"name":"shikimate breakdown","type":"exact"},{"name":"shikimate catabolism","type":"exact"},{"name":"shikimate degradation","type":"exact"}],"termid":"GO:0019633"}


id: MONDO:0021699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders stemming from the misuse and abuse of alcohol.","definition_xrefs":["MESH:D020751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol-related disorders","termid":"MONDO:0021698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol-induced disorders","secondary_identifiers":["MEDGEN:65935","SCTID:719848005","UMLS:C0236970"],"synonyms":[{"name":"alcohol induced disorders","type":"related"},{"name":"alcohol-induced disorder","type":"related"}],"termid":"MONDO:0021699","xrefs":{"Monarch":{"xref_id":"0021699"}}}


id: GO:0098968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of a neurotransmitter receptor complex from the postsynaptic membrane to the postsynaptic early endosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter receptor transport postsynaptic membrane to endosome","termid":"GO:0098968"}


id: PBO:0108527
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as ortholog of human WDR7","termid":"PBO:0108527"}


id: PBO:0066308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ pseudogene 2","termid":"PBO:0066308"}


id: PBO:0060180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 1, cell surface associated","termid":"PBO:0060180"}


id: PBO:0027618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body","termid":"PBO:0027618"}


id: MONDO:0011453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulnar ray dysgenesis with postaxial polydactyly and renal cystic dysplasia","secondary_identifiers":["UMLS:C1858422","MESH:C565783","MEDGEN:346903","OMIM:604380"],"synonyms":[{"name":"ulnar ray dysgenesis with postaxial polydactyly and renal cystic dysplasia","type":"exact"}],"termid":"MONDO:0011453","xrefs":{"Monarch":{"xref_id":"0011453"}}}


id: GO:0008127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + O2 + quercetin = 2-(3,4-dihydroxybenzoyloxy)-4,6-dihydroxybenzoate + CO.","definition_xrefs":["RHEA:15381","EC:1.13.11.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"quercetin 2,3-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R02156","MetaCyc:QUERCETIN-23-DIOXYGENASE-RXN","Reactome:R-HSA-8953398","UM-BBD_reactionID:r0891"],"synonyms":[{"name":"flavonol 2,4-oxygenase activity","type":"related"},{"name":"quercetin:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"quercetinase activity","type":"related"}],"termid":"GO:0008127"}


id: PBO:0058970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melan-A","termid":"PBO:0058970"}


id: PBO:0016541
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic RECombination deficient","termid":"PBO:0016541"}


id: MONDO:0008939
data:
  {"annotated_genes":["SJAG_02470"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86729],"is_not":false,"summary":null,"term":"MONDO:0008939"}]},"cv_name":"mondo","definition":"Hypoplasia of the cerebellum that is associated with inherited metabolic disorders and neurodegenerative disorders. Signs and symptoms include mental and developmental delays, walking and balance difficulties, floppy muscle tone, and seizures.","definition_xrefs":["NCIT:C98890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated cerebellar hypoplasia/agenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:910","Orphanet:1398","MedDRA:10008033","DOID:0070338","MEDGEN:1695950","SCTID:16026008","UMLS:C5231391","MESH:C562568","OMIM:213000","GARD:18720"],"synonyms":[{"name":"Cerebellar Agenesis","type":"exact"},{"name":"Chiari 4 malformation","type":"exact"},{"name":"Chiari IV malformation","type":"exact"},{"name":"cerebellar hypoplasia","type":"related"},{"name":"cerebellar hypoplasia/atrophy, epilepsy, and global developmental delay","type":"exact"},{"name":"congenital cerebellar Hypoplasia","type":"exact"},{"name":"isolated cerebellar agenesis","type":"related"},{"name":"near total absence of cerebellum","type":"exact"},{"name":"subtotal absence of cerebellum","type":"exact"}],"termid":"MONDO:0008939","terms_by_termid":{"MONDO:0008939":null},"xrefs":{"Monarch":{"xref_id":"0008939"}}}


id: MONDO:0006371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pineocytoma (obsolete MONDO:0006371)","termid":"MONDO:0006371","xrefs":{"Monarch":{"xref_id":"0006371"}}}


id: GO:0046159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ocellus pigments, any general or particular coloring matter in living organisms, found or utilized in the ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["PMID:15176085","GOC:ai","PMID:18421706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"},{"relation_name":"is_a","term_name":"ocellus pigment metabolic process","termid":"GO:0046158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ocellus pigment catabolic process","synonyms":[{"name":"ocellus pigment breakdown","type":"exact"},{"name":"ocellus pigment catabolism","type":"exact"},{"name":"ocellus pigment degradation","type":"exact"}],"termid":"GO:0046159"}


id: FYPO:0007899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, localization of a protein to the actomyosin contractile ring is increased.","definition_xrefs":["PomBase:vw","PMID:34613787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased rate of protein localization to actomyosin contractile ring","synonyms":[{"name":"increased rate of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"increased rate of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"increased rate of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"increased rate of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"increased rate of protein localization to mitotic contractile ring","type":"exact"}],"termid":"FYPO:0007899"}


id: PR:O14182
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S12, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.06","secondary_identifiers":["UniProtKB:O14182"],"synonyms":[{"name":"Spom972h-rpsL","type":"exact"}],"termid":"PR:O14182"}


id: MOD:01030
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxybenzotriazole ester","synonyms":[{"name":"HOBt","type":"exact"}],"termid":"MOD:01030"}


id: PBO:0054587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1990","termid":"PBO:0054587"}


id: MONDO:0003732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system mature teratoma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult central nervous system teratoma","termid":"MONDO:0003731"},{"relation_name":"is_a","term_name":"central nervous system mature teratoma","termid":"MONDO:0003733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult central nervous system mature teratoma","secondary_identifiers":["DOID:6016","MEDGEN:231037","NCIT:C27400","UMLS:C1332194"],"synonyms":[{"name":"adult central nervous system mature teratoma","type":"exact"},{"name":"central nervous system mature teratoma of adults","type":"exact"}],"termid":"MONDO:0003732","xrefs":{"Monarch":{"xref_id":"0003732"}}}


id: PBO:0087568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIID, TFIIF, INO80, SWI/SNF, and NuA3 complexes; involved in RNA polymerase II transcription initiation and in chromatin modification; contains a YEATS domain","termid":"PBO:0087568"}


id: MONDO:0019100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory disease of the central nervous system characterized mainly by attacks of uni- or bilateral optic neuritis (ON) and acute myelitis.","definition_xrefs":["Orphanet:71211"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple sclerosis","termid":"MONDO:0005301"},{"relation_name":"excluded_subClassOf","term_name":"obsolete multiple sclerosis variant (obsolete MONDO:0016428)","termid":"MONDO:0016428"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"autoimmune/inflammatory optic neuropathy","termid":"MONDO:0044685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neuromyelitis optica","secondary_identifiers":["MEDGEN:45063","NCIT:C84934","NORD:1505","UMLS:C0027873","DOID:8869","ICD9:341.0","NANDO:1200027","EFO:0004256","MedDRA:10029322","MESH:D009471","SCTID:25044007","icd11.foundation:744293382","GARD:6267","NANDO:2201322"],"synonyms":[{"name":"Devic disease","type":"exact"},{"name":"Devic syndrome","type":"related"},{"name":"Devic's disease","type":"exact"},{"name":"Devic's neuromyelitis optica","type":"related"},{"name":"Devic's syndrome","type":"exact"},{"name":"NMO","type":"related"},{"name":"Neuromyelitis Optica Spectrum Disorder","type":"exact"}],"termid":"MONDO:0019100","xrefs":{"Monarch":{"xref_id":"0019100"}}}


id: PBO:0045281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 32","termid":"PBO:0045281"}


id: MONDO:0007839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aase-Smith syndrome type I is a very rare genetic disorder characterized by the following congenital malformations: hydrocephalus (due to Dandy-Walker anomaly), cleft palate, and severe joint contractures.","definition_xrefs":["Orphanet:916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"Aase-Smith syndrome","secondary_identifiers":["GARD:5642","SCTID:718576001","UMLS:C0220686","OMIM:147800","MedDRA:10063429","MEDGEN:66316","MESH:C535332"],"synonyms":[{"name":"Aase-Smith I syndrome","type":"exact"},{"name":"Aase-Smith syndrome","type":"exact"},{"name":"Aase-Smith syndrome 1","type":"related"},{"name":"Aase-Smith syndrome I","type":"related"},{"name":"Aase-Smith syndrome type 1","type":"exact"},{"name":"Joint contractures with Other abnormalities","type":"related"},{"name":"hydrocephalus-cleft palate-joint contractures syndrome","type":"exact"}],"termid":"MONDO:0007839","xrefs":{"Monarch":{"xref_id":"0007839"}}}


id: MONDO:0014817
data:
  {"annotated_genes":["SJAG_00093","SJAG_01185"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85356,85357],"is_not":false,"summary":null,"term":"MONDO:0014817"}]},"cv_name":"mondo","definition":"Any familial nephrotic syndrome in which the cause of the disease is a mutation in the NUP93 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_01185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:904365","OMIM:616892","DOID:0080387","UMLS:C4225166","GARD:16166"],"synonyms":[{"name":"NPHS12","type":"exact"},{"name":"NUP93 familial nephrotic syndrome","type":"exact"},{"name":"familial nephrotic syndrome caused by mutation in NUP93","type":"exact"},{"name":"nephrotic syndrome, type 12","type":"exact"},{"name":"nephrotic syndrome, type 12; NPHS12","type":"exact"}],"termid":"MONDO:0014817","terms_by_termid":{"MONDO:0014817":null},"xrefs":{"Monarch":{"xref_id":"0014817"}}}


id: FYPO:0002028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one actomyosin contractile ring.","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"multiple actomyosin contractile rings present","synonyms":[{"name":"actomyosin contractile rings present in greater numbers","type":"exact"},{"name":"multiple actomyosin contractile rings present during mitotic cell cycle","type":"related"},{"name":"multiple actomyosin contractile rings present during vegetative growth","type":"exact"},{"name":"multiple cytokinetic contractile rings present","type":"exact"},{"name":"multiple mitotic contractile rings present","type":"exact"}],"termid":"FYPO:0002028"}


id: MONDO:0040679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm derived from the transitional epithelium of the urinary tract (urinary bladder, ureter, urethra, or renal pelvis). It is frequently papillary.","definition_xrefs":["NCIT:C4030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant urinary system neoplasm","termid":"MONDO:0006295"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"},{"relation_name":"is_a","term_name":"urothelial neoplasm","termid":"MONDO:0024337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urothelial carcinoma","secondary_identifiers":["EFO:0008528","UMLS:C2145472","MEDGEN:760495"],"synonyms":[{"name":"Uroepithelial carcinoma","type":"exact"},{"name":"transitional cell car. -uroth.","type":"exact"},{"name":"transitional cell carcinoma of the urinary tract","type":"exact"},{"name":"transitional cell carcinoma of the urothelial tract","type":"exact"},{"name":"urothelial carcinoma","type":"exact"}],"termid":"MONDO:0040679","xrefs":{"Monarch":{"xref_id":"0040679"}}}


id: GO:0047354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-choline + sphingosine = CMP + H+ + sphingosyl-phosphocholine.","definition_xrefs":["RHEA:21224","EC:2.7.8.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016780","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sphingosine cholinephosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.8.10-RXN","KEGG_REACTION:R01929"],"synonyms":[{"name":"CDP-choline-sphingosine cholinephosphotransferase activity","type":"related"},{"name":"CDP-choline:sphingosine cholinephosphotransferase activity","type":"related"},{"name":"cytidine diphosphocholine-sphingosine cholinephosphotransferase activity","type":"related"},{"name":"phosphorylcholine-sphingosine transferase activity","type":"related"},{"name":"sphingosine choline phosphotransferase activity","type":"exact"}],"termid":"GO:0047354"}


id: PBO:0059838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission regulator 2","termid":"PBO:0059838"}


id: GO:0102851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-16:0-phosphatidylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-trans-16:1-phosphatidylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-16:0-phosphatidylglycerol desaturase activity (obsolete GO:0102851)","termid":"GO:0102851"}


id: GO:0010015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of roots are generated and organized. The root is the usually underground part of a seed plant body that originates from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support.","definition_xrefs":["GOC:sm","ISBN:0877797099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root morphogenesis","termid":"GO:0010015"}


id: PBO:0063288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 2","termid":"PBO:0063288"}


id: GO:0102654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-acyl-2-hexadecanoyl-glycerolipid + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = a 1-acyl-2-[(3E)-hexadec-3-enoyl]-glycerolipid + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin]. The this activity introduces an unusual trans double bond at carbon 3 of a palmitoyl group attached to the sn-2 position of glycerolipids.","definition_xrefs":["RHEA:46764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"palmitoyl-[glycerolipid] 3-(E)-desaturase activity","secondary_identifiers":["MetaCyc:RXN-16053","EC:1.14.19.43"],"synonyms":[{"name":"1-18:1-2-16:0-phosphatidylglycerol trans-3 desaturase activity","type":"related"}],"termid":"GO:0102654"}


id: PBO:0088848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex subunit","termid":"PBO:0088848"}


id: PBO:0087534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II; Complex I is essential in autophagy, Complex II is required for vacuolar protein sorting; required for overflow degradation of misfolded proteins when ERAD is saturated; C-terminus has novel globular fold essential for autophagy through the targeting of the PI3-kinase complex I to the pre-autophagosomal structure; ortholog of higher eukaryote gene Beclin 1; human BECN1 can complement yeast null mutant","termid":"PBO:0087534"}


id: FYPO:0005487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased iron-sulfur cluster binding","synonyms":[{"name":"decreased iron-sulphur cluster binding","type":"exact"},{"name":"reduced iron-sulfur cluster binding","type":"exact"}],"termid":"FYPO:0005487"}


id: MONDO:0011261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spondyloepiphyseal dysplasia characterized by spondyloepiphyseal dysplasia, craniosynostosis, cataracts, cleft palate and intellectual deficit. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["Orphanet:163649"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia with coronal craniosynostosis, cataracts, cleft palate, and intellectual disability","secondary_identifiers":["UMLS:C1865134","DOID:0112294","MEDGEN:355919","GARD:16993","MESH:C566515","OMIM:602611","SCTID:718766002"],"synonyms":[{"name":"spondyloepiphyseal dysplasia with coronal craniosynostosis, cataracts, cleft palate, and intellectual disability","type":"exact"},{"name":"spondyloepiphyseal dysplasia with coronal craniosynostosis, cataracts, cleft palate, and mental retardation","type":"exact"},{"name":"spondyloepiphyseal dysplasia-craniosynostosis-cleft palate-cataract-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0011261","xrefs":{"Monarch":{"xref_id":"0011261"}}}


id: GO:0120059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of small intestinal transit","termid":"GO:0120057"},{"relation_name":"negatively_regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of small intestinal transit","synonyms":[{"name":"negative regulation of small bowel transit","type":"exact"},{"name":"negative regulation of small intestine transit","type":"exact"}],"termid":"GO:0120059"}


id: GO:0075141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that contributes to the maintenance of a physiologic state in which the symbiont immune system does not react destructively against the components of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont tolerance to host environment (obsolete GO:0075141)","synonyms":[{"name":"maintenance of symbiont tolerance to host environment","type":"related"},{"name":"maintenance of symbiont tolerance to host iron concentration","type":"narrow"},{"name":"maintenance of symbiont tolerance to host osmotic environment","type":"narrow"},{"name":"maintenance of symbiont tolerance to host oxygen tension environment","type":"narrow"},{"name":"maintenance of symbiont tolerance to host pH environment","type":"narrow"},{"name":"maintenance of symbiont tolerance to host redox environment","type":"narrow"}],"termid":"GO:0075141"}


id: PBO:0045947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Tu GTP binding domain containing 2","termid":"PBO:0045947"}


id: PBO:0048433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta pseudogene 1","termid":"PBO:0048433"}


id: GO:0007478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the leg disc are generated and organized. This includes the transformation of a leg imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the leg, coxa and ventral thoracic pleura.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"leg disc development","termid":"GO:0035218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leg disc morphogenesis","synonyms":[{"name":"leg disc metamorphosis","type":"exact"}],"termid":"GO:0007478"}


id: GO:0003348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac endothelial cell.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac endothelial cell differentiation","termid":"GO:0003348"}


id: GO:0150062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synaptic pruning mediated by complement system signaling.","definition_xrefs":["PMID:29844190","GOC:bc","PMID:18083105","GOC:aruk","PMID:22632727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement-mediated synapse pruning","synonyms":[{"name":"complement-dependent synapse pruning","type":"exact"},{"name":"synapse clearance","type":"broad"},{"name":"synapse disassembly","type":"broad"},{"name":"synapse elimination","type":"broad"},{"name":"synapse removal","type":"broad"}],"termid":"GO:0150062"}


id: FYPO:0008254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a greater extent than normal in regions containing protein-coding genes.","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 acetylation during vegetative growth","termid":"FYPO:0004238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K4 acetylation at protein coding gene during vegetative growth","termid":"FYPO:0008254"}


id: _global:decreased_in_magnitude_relative_to
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 decreased_in_magnitude_relative_to q2 if and only if magnitude(q1) < magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"different_in_magnitude_relative_to","termid":"_global:different_in_magnitude_relative_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_in_magnitude_relative_to","termid":"_global:decreased_in_magnitude_relative_to"}


id: GO:1904283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of antigen processing and presentation of endogenous peptide antigen via MHC class I.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:24643698","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002590"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:1904282"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:0019885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","synonyms":[{"name":"down regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","type":"exact"},{"name":"down regulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"down-regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","type":"exact"},{"name":"down-regulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"downregulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","type":"exact"},{"name":"downregulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"inhibition of antigen processing and presentation of endogenous peptide antigen via MHC class I","type":"narrow"},{"name":"inhibition of endogenous peptide antigen processing and presentation via MHC class I","type":"narrow"},{"name":"negative regulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:1904283"}


id: PBO:0066291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member S, pseudogene","termid":"PBO:0066291"}


id: FYPO:0000700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"},{"relation_name":"is_a","term_name":"increased DNA N-glycosylase activity","termid":"FYPO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000700"}


id: GO:2000238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tRNA export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA export from nucleus","termid":"GO:0046831"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"regulates","term_name":"tRNA export from nucleus","termid":"GO:0006409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"regulation of tRNA export from nucleus","synonyms":[{"name":"regulation of tRNA export from cell nucleus","type":"exact"},{"name":"regulation of tRNA export out of nucleus","type":"exact"},{"name":"regulation of tRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of tRNA-nucleus export","type":"exact"}],"termid":"GO:2000238"}


id: PBO:0058439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5003","termid":"PBO:0058439"}


id: FYPO:0000056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitochondria have fused into fewer and larger structures than normal, or failed to undergo fission.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"mitochondria fused","synonyms":[{"name":"fused mitochondria","type":"exact"},{"name":"mitochondria fused during mitotic cell cycle","type":"related"},{"name":"mitochondria fused during vegetative growth","type":"exact"}],"termid":"FYPO:0000056"}


id: PBO:0072862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP","termid":"PBO:0072862"}


id: GO:0140374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense response against viruses mediated through an innate immune response. An innate immune response is mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["PMID:31006531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antiviral innate immune response","termid":"GO:0140374"}


id: PBO:0088384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial N(5)-glutamine methyltransferase","termid":"PBO:0088384"}


id: FYPO:0007259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic spindle pole body duplication is increased.","definition_xrefs":["PMID:22438582","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle pole body duplication","termid":"FYPO:0007258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased meiotic spindle pole body duplication","synonyms":[{"name":"increased meiotic SPB duplication","type":"exact"},{"name":"increased spindle pole body duplication during meiotic cell cycle","type":"related"},{"name":"meiotic SPB overamplification","type":"exact"}],"termid":"FYPO:0007259"}


id: MONDO:0011576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hyperaldosteronism type II (FH-II) is a heritable form of primary aldosteronism (PA) characterized by hypertension of varying severity, and non glucocticoid remediable hyperaldosteronism.","definition_xrefs":["Orphanet:404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperaldosteronism","termid":"MONDO:0016525"},{"relation_name":"is_a","term_name":"adrenal cortex neoplasm","termid":"MONDO:0036591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial hyperaldosteronism type II","secondary_identifiers":["MESH:C565312","SCTID:703233008","UMLS:C1854107","MEDGEN:340137","OMIM:605635","NCIT:C127162","GARD:2789"],"synonyms":[{"name":"FH 2","type":"related"},{"name":"FH-II","type":"exact"},{"name":"FH2","type":"exact"},{"name":"FHII","type":"related"},{"name":"HALD2","type":"related"},{"name":"familial adrenal adenoma","type":"exact"},{"name":"familial hyperaldosteronism type 2","type":"exact"},{"name":"hyperaldosteronism, familial, type II","type":"related"}],"termid":"MONDO:0011576","xrefs":{"Monarch":{"xref_id":"0011576"}}}


id: MONDO:0010036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any secretory diarrhea in which the cause of the disease is a mutation in the SPINT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital sodium diarrhea","termid":"MONDO:0015170"},{"relation_name":"is_a","term_name":"congenital secretory diarrhea","termid":"MONDO:0045032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital secretory sodium diarrhea 3","secondary_identifiers":["OMIM:270420","DOID:0060781","GARD:18260","UMLS:C5441927","MEDGEN:1778108"],"synonyms":[{"name":"DIAR3","type":"related"},{"name":"SPINT2 secretory diarrhea","type":"exact"},{"name":"SPINT2 secretory diarrhoea","type":"exact"},{"name":"congenital secretory sodium diarrhea 3 syndromic","type":"exact"},{"name":"congenital secretory sodium diarrhea 3 with or without other congenital anomalies","type":"exact"},{"name":"congenital secretory sodium diarrhea type 3","type":"exact"},{"name":"congenital secretory sodium diarrhoea 3 syndromic","type":"exact"},{"name":"congenital secretory sodium diarrhoea 3 with or without other congenital anomalies","type":"exact"},{"name":"congenital secretory sodium diarrhoea type 3","type":"exact"},{"name":"diarrhea 3, secretory sodium, congenital, syndromic","type":"related"},{"name":"diarrhea 3, secretory sodium, congenital, with or without other congenital anomalies","type":"related"},{"name":"diarrhoea 3, secretory sodium, congenital, syndromic","type":"related"},{"name":"diarrhoea 3, secretory sodium, congenital, with or without other congenital anomalies","type":"related"},{"name":"secretory diarrhea caused by mutation in SPINT2","type":"exact"},{"name":"secretory diarrhoea caused by mutation in SPINT2","type":"exact"},{"name":"sodium diarrhea, congenital","type":"related"}],"termid":"MONDO:0010036","xrefs":{"Monarch":{"xref_id":"0010036"}}}


id: PBO:0051134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-6 (pseudogene)","termid":"PBO:0051134"}


id: SO:0001602
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that changes the translational product with respect to the reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_change_of_translational_product_variant","synonyms":[{"name":"complex change of translational product variant","type":"exact"}],"termid":"SO:0001602"}


id: MONDO:0020629
data:
  {"annotated_genes":["SJAG_04816","SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008876"},{"annotations":[85946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020628"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03898":null,"SJAG_04816":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, growth restriction and increased sister chromatid exchange","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:210900"],"synonyms":[{"name":"MGRISCE","type":"exact"}],"termid":"MONDO:0020629","terms_by_termid":{"MONDO:0008876":null,"MONDO:0020628":null},"xrefs":{"Monarch":{"xref_id":"0020629"}}}


id: MONDO:1011544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic pulmonary fibrosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic pulmonary fibrosis, non-human animal","termid":"MONDO:1011451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic pulmonary fibrosis, domestic cat","secondary_identifiers":["OMIA:001417-9685"],"termid":"MONDO:1011544","xrefs":{"Monarch":{"xref_id":"1011544"}}}


id: PR:O14190
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00502","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase subunit alg13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.02c","secondary_identifiers":["UniProtKB:O14190"],"synonyms":[{"name":"Spom972h-ALG13","type":"exact"},{"name":"asparagine-linked glycosylation protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14190"}


id: MONDO:0020465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital eyelid retraction is a very rare kinetic eyelid anomaly that can affect the upper or lower eyelid, presents at birth, that in some cases can result in corneal exposure, and that may be associated with accessory levator muscle slips.","definition_xrefs":["Orphanet:99176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital eyelid retraction","secondary_identifiers":["MEDGEN:894858","GARD:19675","icd11.foundation:11235593","SCTID:715769008","UMLS:C4274470"],"termid":"MONDO:0020465","xrefs":{"Monarch":{"xref_id":"0020465"}}}


id: GO:0046423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,13S,15Z)-12,13-epoxyoctadeca-9,11,15-trienoate = (15Z)-12-oxophyto-10,15-dienoate.","definition_xrefs":["EC:5.3.99.6","RHEA:22592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0009975","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"allene-oxide cyclase activity","secondary_identifiers":["MetaCyc:ALLENE-OXIDE-CYCLASE-RXN","KEGG_REACTION:R03402"],"synonyms":[{"name":"(9Z)-(13S)-12,13-epoxyoctadeca-9,11,15-trienoate isomerase (cyclizing)","type":"related"}],"termid":"GO:0046423"}


id: GO:0071657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of granulocyte colony-stimulating factor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte colony-stimulating factor production","termid":"GO:0071655"},{"relation_name":"is_a","term_name":"positive regulation of macrophage colony-stimulating factor production","termid":"GO:1901258"},{"relation_name":"positively_regulates","term_name":"granulocyte colony-stimulating factor production","termid":"GO:0071611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of granulocyte colony-stimulating factor production","synonyms":[{"name":"positive regulation of CSF3 production","type":"exact"},{"name":"positive regulation of G-CSF production","type":"exact"},{"name":"positive regulation of colony stimulating factor 3 (granulocyte) production","type":"exact"},{"name":"positive regulation of filgrastim production","type":"exact"},{"name":"positive regulation of granulocyte colony stimulating factor production","type":"exact"},{"name":"positive regulation of lenograstim production","type":"exact"},{"name":"positive regulation of pluripoietin production","type":"exact"}],"termid":"GO:0071657"}


id: PBO:0061035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIP7 pseudogene 1","termid":"PBO:0061035"}


id: MONDO:0022648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A specific change in the MTTK gene causes a condition characterized by weakened heart muscle (cardiomyopathy) and hearing loss. Affected individuals may also have myopathy and ataxia. This mutation replaces the DNA building block (nucleotide) guanine with the nucleotide adenine at position 8363 (written as G8363A) within the gene. It is unclear how this alteration in the MTTK gene results in cardiomyopathy, hearing loss, and other symptoms.","definition_xrefs":["GARD:0001108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and deafness due to tRNA lysine gene mutation","secondary_identifiers":["GTR:AN0103739","HGNC:7489","GTR:AN0103738"],"synonyms":[{"name":"cardiomyopathy and deafness due to MTTK gene mutation","type":"related"},{"name":"cardiomyopathy and deafness due to tRNA lysine gene mutation","type":"exact"}],"termid":"MONDO:0022648","xrefs":{"Monarch":{"xref_id":"0022648"}}}


id: PBO:0063335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNA antisense RNA 1","termid":"PBO:0063335"}


id: GO:0046739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a virus between cells in a multicellular organism. The cells can be adjacent or spatially separated (e.g. in different tissues or organs).","definition_xrefs":["GOC:jl","ISBN:0781718325","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migration in host","termid":"GO:0044001"},{"relation_name":"is_a","term_name":"transport of virus","termid":"GO:0046794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transport of virus in multicellular host","synonyms":[{"name":"spread of virus in multicellular host","type":"related"},{"name":"spread of virus within multicellular host","type":"exact"},{"name":"viral spread within multicellular host","type":"exact"}],"termid":"GO:0046739"}


id: PATO:0002244
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flow rate quality inhering in a substance by virtue of the mass of substance which passes through a given surface per unit time.","direct_ancestors":[{"relation_name":"is_a","term_name":"flow rate","termid":"PATO:0001574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mass flow rate","termid":"PATO:0002244"}


id: MONDO:0004573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dietary deficiency of riboflavin causing a syndrome chiefly marked by cheilitis, angular stomatitis, glossitis associated with a purplish red or magenta-colored tongue that may show fissures, corneal vascularization, dyssebacia, and anemia. (Dorland, 27th ed)","definition_xrefs":["MESH:D012257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariboflavinosis","secondary_identifiers":["ICD9:266.0","OMIM:615026","DOID:8454","SCTID:20307000","UMLS:C0035528","MEDGEN:20573"],"synonyms":[{"name":"riboflavin deficiency","type":"exact"},{"name":"vitamin B2 deficiency","type":"exact"}],"termid":"MONDO:0004573","xrefs":{"Monarch":{"xref_id":"0004573"}}}


id: PBO:0046770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 10","termid":"PBO:0046770"}


id: PBO:0049357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 15","termid":"PBO:0049357"}


id: GO:0007261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a dimer of two STAT proteins (Signal Transducers and Activators of Transcription) following their activation by members of the janus activated kinase (JAK) family of tyrosine kinases.","definition_xrefs":["PMID:12039028","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete JAK-induced STAT protein dimerization (obsolete GO:0007261)","synonyms":[{"name":"JAK-induced STAT protein dimerization","type":"exact"}],"termid":"GO:0007261"}


id: MONDO:0019770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked intellectual disability-epilepsy syndrome","termid":"MONDO:0016160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"X-linked dominant intellectual disability-epilepsy syndrome","secondary_identifiers":["Orphanet:93951"],"termid":"MONDO:0019770","xrefs":{"Monarch":{"xref_id":"0019770"}}}


id: PR:Q09820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulator of nonsense transcripts 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10887:SF26","PRO:DNx","OMA:SCHPO00313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase upf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.06c","secondary_identifiers":["UniProtKB:Q09820"],"synonyms":[{"name":"Spom972h-UPF1","type":"exact"},{"name":"nonsense-mediated mRNA decay protein upf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"regulator of nonsense transcripts 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"up-frameshift suppressor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09820"}


id: PR:O94411
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug55 gene.","definition_xrefs":["UniProtKB:O94411","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic fizzy-related protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.04c","synonyms":[{"name":"Spom972h-mug55","type":"exact"},{"name":"meiotically up-regulated gene 55 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94411"}


id: PBO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 33B","termid":"PBO:0052793"}


id: MONDO:0850112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"breast implant-associated anaplastic large cell lymphoma","secondary_identifiers":["Orphanet:667662","icd11.foundation:1216213663","UMLS:C4528210","DOID:0070333","MEDGEN:1611347"],"termid":"MONDO:0850112","xrefs":{"Monarch":{"xref_id":"0850112"}}}


id: PBO:0072163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 40","termid":"PBO:0072163"}


id: FYPO:0002135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is increased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased protein-RNA interaction","synonyms":[{"name":"increased RNA binding","type":"exact"},{"name":"increased RNA-protein interaction","type":"exact"}],"termid":"FYPO:0002135"}


id: GO:0036495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation initiation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"},{"relation_name":"is_a","term_name":"negative regulation of translation in response to endoplasmic reticulum stress","termid":"GO:1902010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"negative regulation of translation initiation in response to ER stress","type":"related"}],"termid":"GO:0036495"}


id: GO:0006200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP catabolic process (obsolete GO:0006200)","secondary_identifiers":["Wikipedia:ATP_hydrolysis"],"synonyms":[{"name":"ATP breakdown","type":"exact"},{"name":"ATP catabolism","type":"exact"},{"name":"ATP degradation","type":"exact"},{"name":"ATP hydrolysis","type":"narrow"}],"termid":"GO:0006200"}


id: PBO:0079340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 24, pseudogene","termid":"PBO:0079340"}


id: GO:2000027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of animal organ morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of animal organ morphogenesis","synonyms":[{"name":"regulation of histogenesis and organogenesis","type":"related"}],"termid":"GO:2000027"}


id: PBO:0072791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 1 pseudogene 1","termid":"PBO:0072791"}


id: MONDO:0014298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PDE4D haploinsufficiency syndrome is a rare syndromic intellectual disability characterized by developmental delay, intellectual disability, low body mass index, long arms, fingers and toes, prominent nose and small chin.","definition_xrefs":["Orphanet:439822"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 5","termid":"MONDO:0016904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5q12 deletion syndrome","secondary_identifiers":["DOID:0060421","GARD:17742","MEDGEN:816612","OMIM:615668","UMLS:C3810282"],"synonyms":[{"name":"PDE4D haploinsufficiency syndrome","type":"related"},{"name":"chromosome 5q12 deletion syndrome","type":"exact"}],"termid":"MONDO:0014298","xrefs":{"Monarch":{"xref_id":"0014298"}}}


id: PBO:0076886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 37","termid":"PBO:0076886"}


id: GO:0070793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of conidiophore development, a process that leads to the formation of a conidiophore. The conidiophore is a specialized hypha that extends aerially from the growth substrate and bears conidia, or asexual spores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of conidiophore development","termid":"GO:0070793"}


id: MONDO:0014781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the TXN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0004069","MONDO:0005559"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 29","secondary_identifiers":["OMIM:616811","Orphanet:478029","MEDGEN:1799030","UMLS:C5567607","DOID:0111501","GARD:17863"],"synonyms":[{"name":"COXPD29","type":"exact"},{"name":"TXN2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 29","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 29; COXPD29","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in TXN2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 29","type":"exact"}],"termid":"MONDO:0014781","xrefs":{"Monarch":{"xref_id":"0014781"}}}


id: PBO:0048326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 37","termid":"PBO:0048326"}


id: MONDO:0009014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cornea plana in which the cause of the disease is a mutation in the KERA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cornea plana","termid":"MONDO:0000733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cornea plana 2","secondary_identifiers":["OMIM:217300","UMLS:C1857574","MEDGEN:346616","MESH:C565677","GARD:18050"],"synonyms":[{"name":"CNA2","type":"related"},{"name":"KERA cornea plana","type":"exact"},{"name":"cornea plana 2","type":"exact"},{"name":"cornea plana 2, autosomal recessive","type":"related"},{"name":"cornea plana caused by mutation in KERA","type":"exact"},{"name":"cornea plana type 2","type":"exact"}],"termid":"MONDO:0009014","xrefs":{"Monarch":{"xref_id":"0009014"}}}


id: PBO:0073767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 1 adaptor protein pseudogene 1","termid":"PBO:0073767"}


id: GO:0005172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor binding","synonyms":[{"name":"VEGF receptor binding","type":"exact"},{"name":"VEGFR binding","type":"exact"},{"name":"vascular endothelial growth factor","type":"narrow"},{"name":"vascular endothelial growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005172"}


id: PBO:0064469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta interacting protein 3","termid":"PBO:0064469"}


id: GO:0007353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ventral/lateral system (obsolete GO:0007353)","synonyms":[{"name":"ventral/lateral system","type":"exact"}],"termid":"GO:0007353"}


id: FYPO:0000897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000266","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial fission","synonyms":[{"name":"normal mitochondrial division","type":"exact"},{"name":"normal mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial fission during vegetative growth","type":"exact"},{"name":"normal mitochondrial proliferation","type":"related"}],"termid":"FYPO:0000897"}


id: MONDO:0700268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the BRCA1 gene. Germline pathogenic or likely pathogenic variants in the BRCA1 gene confer an autosomal dominant predisposition to hereditary breast and ovarian cancer. Tumor formation at other sites, including pancreatic cancer have been described.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1-related cancer predisposition","termid":"MONDO:0700268","xrefs":{"Monarch":{"xref_id":"0700268"}}}


id: GO:0033091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immature T cell proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immature T cell proliferation","termid":"GO:0033083"},{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"positively_regulates","term_name":"immature T cell proliferation","termid":"GO:0033079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of immature T cell proliferation","termid":"GO:0033091"}


id: GO:0018256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a formyl group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein formylation","synonyms":[{"name":"protein amino acid formylation","type":"exact"}],"termid":"GO:0018256"}


id: PBO:0058749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6873","termid":"PBO:0058749"}


id: PBO:0064351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin C1","termid":"PBO:0064351"}


id: GO:0006505
data:
  {"annotated_genes":["SJAG_03801","SJAG_00295","SJAG_01570","SJAG_04119","SJAG_02523","SJAG_00506","SJAG_04165","SJAG_04975","SJAG_03066","SJAG_01860","SJAG_03878","SJAG_02913","SJAG_03292","SJAG_04924","SJAG_00846","SJAG_02804","SJAG_01227","SJAG_00068","SJAG_03506","SJAG_01416","SJAG_03115","SJAG_00831","SJAG_04881","SJAG_06383","SJAG_04337","SJAG_02776","SJAG_05327","SJAG_05278","SJAG_06425","SJAG_03672","SJAG_02488"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108044,111050,113382,92590,115579,88440,90734,114231,89064,107013,90907,114655,99785,103197,111802,86956,103259,93034,116678,99719,88168,101096,109387,98371,98164,97603,91736,92501,102526,94018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[97004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosylphosphatidylinositol anchors, molecular mechanisms for attaching membrane proteins to the lipid bilayer of cell membranes. Structurally they consist of a molecule of phosphatidylinositol to which is linked, via the C-6 hydroxyl of the inositol, a carbohydrate chain. This chain is in turn linked to the protein through an ethanolamine phosphate group, the amino group of which is in amide linkage with the C-terminal carboxyl of the protein chain, the phosphate group being esterified to the C-6 hydroxyl of the terminal mannose of the core carbohydrate chain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"GPI anchor metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0046472"],"synonyms":[{"name":"GPI anchor metabolism","type":"exact"},{"name":"GPI/GSI anchor metabolic process","type":"broad"},{"name":"GPI/GSI anchor metabolism","type":"broad"},{"name":"glycosylphosphatidylinositol metabolic process","type":"exact"},{"name":"glycosylphosphatidylinositol metabolism","type":"exact"}],"termid":"GO:0006505","terms_by_termid":{"GO:0006506":null,"GO:0006676":null}}


id: PBO:0056320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 5","termid":"PBO:0056320"}


id: GO:0072442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether DNA replication is complete is received and converted into a molecular signal, contributing to a mitotic DNA replication checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic DNA replication checkpoint (obsolete GO:0072442)","synonyms":[{"name":"S-M checkpoint sensor mechanism","type":"related"},{"name":"S-M checkpoint sensor process","type":"related"},{"name":"detection of stimulus involved in S-M checkpoint","type":"related"},{"name":"mitotic DNA replication checkpoint sensor mechanism","type":"related"},{"name":"mitotic DNA replication checkpoint sensor process","type":"related"},{"name":"sensing involved in S-M checkpoint","type":"related"},{"name":"sensing involved in mitotic DNA replication checkpoint","type":"related"}],"termid":"GO:0072442"}


id: PBO:0060834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 like E3 ubiquitin protein ligase","termid":"PBO:0060834"}


id: PATO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality of inhering in a male by virtue of the bearer's disposition to initiate, sustain, or support reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male fertility","termid":"PATO:0000279"}


id: GO:0050075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-malate = H2O + maleate.","definition_xrefs":["RHEA:23692","EC:4.2.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"maleate hydratase activity","secondary_identifiers":["KEGG_REACTION:R02419","MetaCyc:MALEATE-HYDRATASE-RXN"],"synonyms":[{"name":"(R)-malate hydro-lyase (maleate-forming)","type":"related"},{"name":"(R)-malate hydro-lyase activity","type":"related"},{"name":"D-malate hydro-lyase activity","type":"related"},{"name":"malease activity","type":"related"}],"termid":"GO:0050075"}


