# terms

id: MONDO:0008811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"XK aprosencephaly is a very rare syndromic type of cerebral malformation characterized by aprosencephaly (absence of telencephalon and diencephalon), oculo-facial anomalies (i.e. ocular hypotelorism or cyclopia, malformation/absence of nasal structures, cleft lip), preaxial limb defects (i.e. hypoplastic hands, absent halluces) and various other anomalies including ambiguous genitalia, imperforate anus, and vertebral anomalies. The syndrome is thought to have an autosomal recessive mode of inheritance.","definition_xrefs":["Orphanet:3469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK aprosencephaly","secondary_identifiers":["SCTID:277921008","UMLS:C0795952","icd11.foundation:1805259428","MESH:C536767","GARD:424","MEDGEN:167087","OMIM:207770"],"synonyms":[{"name":"Garcia-Lurie syndrome","type":"exact"},{"name":"XK aprosencephaly syndrome","type":"related"},{"name":"XK-aprosencephaly","type":"exact"},{"name":"XK-aprosencephaly syndrome","type":"related"},{"name":"Xk syndrome","type":"related"},{"name":"aprosencephaly syndrome","type":"related"},{"name":"aprosencephaly-atelencephaly syndrome","type":"related"},{"name":"atelencephaly","type":"related"}],"termid":"MONDO:0008811","xrefs":{"Monarch":{"xref_id":"0008811"}}}


id: MONDO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the paranasal sinus.","direct_ancestors":[{"relation_name":"is_a","term_name":"nasal disorder","termid":"MONDO:0002436"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"skull disorder","termid":"MONDO:0024654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paranasal sinus disorder","secondary_identifiers":["DOID:1352","ICD9:478.1","MESH:D010254","MEDGEN:14608","SCTID:7393007","NCIT:C26843","EFO:0009481","UMLS:C0030469"],"synonyms":[{"name":"disease of paranasal sinus","type":"exact"},{"name":"disease or disorder of paranasal sinus","type":"exact"},{"name":"disorder of nasal sinus","type":"exact"},{"name":"disorder of paranasal sinus","type":"exact"},{"name":"paranasal sinus disease","type":"exact"},{"name":"paranasal sinus disease or disorder","type":"exact"},{"name":"paranasal sinus disorder","type":"exact"},{"name":"sinus disorder","type":"exact"}],"termid":"MONDO:0001735","xrefs":{"Monarch":{"xref_id":"0001735"}}}


id: GO:0047975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine + phosphate = guanine + D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"guanosine phosphorylase activity","secondary_identifiers":["RHEA:13233","MetaCyc:RXN0-5199"],"synonyms":[{"name":"guanosine:phosphate D-ribosyltransferase activity","type":"related"},{"name":"guanosine:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0047975"}


id: PR:O13698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malonyl-CoA-acyl carrier protein transacylase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01650","PANTHER:PTHR10982:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl CoA-acyl carrier protein transacylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.05c","secondary_identifiers":["UniProtKB:O13698"],"synonyms":[{"name":"MCT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MCAT","type":"exact"},{"name":"malonyl-CoA:ACP transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13698"}


id: GO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an odorant and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity in response to detection of smell.","definition_xrefs":["PMID:21041441","PMID:19135896","GOC:dph","GOC:bf","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"olfactory receptor activity","synonyms":[{"name":"odorant receptor activity","type":"exact"}],"termid":"GO:0004984"}


id: PR:O43028
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vac8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.14c","synonyms":[{"name":"Spom972h-vac8","type":"exact"}],"termid":"PR:O43028"}


id: GO:2000442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of toll-like receptor 15 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 15 signaling pathway","termid":"GO:2000440"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 15 signaling pathway","termid":"GO:0035681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 15 signaling pathway","synonyms":[{"name":"positive regulation of TLR15 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 15 signalling pathway","type":"exact"}],"termid":"GO:2000442"}


id: GO:0090641
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The middle layer in a microsporidian spore wall that lies under the exospore and outside the plasma membrane, containing chitin and proteins.","definition_xrefs":["PMID:19457051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"microsporidian-type endospore","termid":"GO:0090641"}


id: MONDO:0003334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyneuropathy that is characterized by demyelination of axons.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"},{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"demyelinating polyneuropathy","secondary_identifiers":["NCIT:C27062","SCTID:23414001","DOID:5214","UMLS:C0270922","MEDGEN:82859","ICD9:356.9"],"synonyms":[{"name":"peripheral demyelinating neuropathy","type":"exact"}],"termid":"MONDO:0003334","xrefs":{"Monarch":{"xref_id":"0003334"}}}


id: GO:0050344
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cinnamate + H+ + NADPH + O2 = 2-coumarate + H2O + NADP+.","definition_xrefs":["RHEA:10956","EC:1.14.13.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"trans-cinnamate 2-monooxygenase activity","secondary_identifiers":["MetaCyc:TRANS-CINNAMATE-2-MONOOXYGENASE-RXN","KEGG_REACTION:R02254"],"synonyms":[{"name":"cinnamate 2-hydroxylase activity","type":"related"},{"name":"cinnamate 2-monooxygenase activity","type":"related"},{"name":"cinnamic 2-hydroxylase activity","type":"related"},{"name":"cinnamic acid 2-hydroxylase activity","type":"related"},{"name":"trans-cinnamate,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"trans-cinnamic acid 2-hydroxylase activity","type":"exact"}],"termid":"GO:0050344"}


id: MONDO:0018593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyarteritis nodosa","termid":"MONDO:0019170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary polyarteritis nodosa","secondary_identifiers":["Orphanet:439737","UMLS:C5680052","GARD:21830","MEDGEN:1842954"],"synonyms":[{"name":"primary PAN","type":"exact"},{"name":"primary periarteritis nodosa","type":"exact"}],"termid":"MONDO:0018593","xrefs":{"Monarch":{"xref_id":"0018593"}}}


id: MONDO:0002875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infestations by parasites which live on, or burrow into, the surface of their host's epidermis. Most ectoparasites are arthropods.","definition_xrefs":["MESH:D004478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic skin disorder","termid":"MONDO:0024610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"parasitic ectoparasitic infectious disease","secondary_identifiers":["DOID:4110","ICD10CM:B85-B89","MEDGEN:3964","UMLS:C0013578"],"synonyms":[{"name":"Infestations, ectoparasitic","type":"related"},{"name":"ectoparasitic infestation","type":"related"},{"name":"ectoparasitism","type":"exact"},{"name":"infestation, ectoparasitic","type":"related"}],"termid":"MONDO:0002875","xrefs":{"Monarch":{"xref_id":"0002875"}}}


id: MONDO:0013004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotonia, seizures, and precocious puberty","secondary_identifiers":["UMLS:C2748586","MESH:C567566","OMIM:612777","MEDGEN:411248"],"synonyms":[{"name":"hypotonia, seizures, and precocious puberty","type":"exact"}],"termid":"MONDO:0013004","xrefs":{"Monarch":{"xref_id":"0013004"}}}


id: PBO:0026698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_arabinose_carbon_source","termid":"PBO:0026698"}


id: PBO:0113357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for sporulation; induced during meiosis and sporulation; gene is a member of Centroid, a centromere-linked gene family; not an essential gene; YNL034W has a paralog, YNL018C, that arose from a segmental duplication","termid":"PBO:0113357"}


id: GO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated a ligand binding to an alpha-type platelet-derived growth factor receptor (PDGFalpha) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","GOC:yaf","PMID:10372961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"PDGFR-alpha signaling pathway","type":"related"},{"name":"alphaPDGF receptor signaling pathway","type":"exact"},{"name":"platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:0035790"}


id: FYPO:0007398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which signaling via a MAP kinase cascade that is activated in response to stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0051403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000298","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal stress-activated MAPK cascade","synonyms":[{"name":"normal MAPK signalling in response to stress","type":"exact"},{"name":"normal stress-activated MAPK cascade during mitotic cell cycle","type":"related"},{"name":"normal stress-activated MAPK cascade during vegetative growth","type":"exact"},{"name":"normal stress-activated MAPK signaling pathway","type":"exact"}],"termid":"FYPO:0007398"}


id: PBO:0038688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin beta","termid":"PBO:0038688"}


id: GO:0036348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-5-monosubstituted hydantoin = L-5-monosubstituted hydantoin.","definition_xrefs":["EC:5.1.99.5","InterPro:IPR015942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"hydantoin racemase activity","secondary_identifiers":["RHEA:46624","KEGG_REACTION:R09704","MetaCyc:RXN-9781"],"termid":"GO:0036348"}


id: PBO:0091514
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae Mid Two-Like","termid":"PBO:0091514"}


id: MOD:00793
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80046],"is_not":false,"summary":null,"term":"MOD:00793"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to dehydroalanine.","definition_xrefs":["DeltaMass:8","PubMed:10220322","PubMed:20805503","Unimod:368","PubMed:1815586","ChEBI:17123","PubMed:1547888","PubMed:7947813","RESID:AA0181#CYS","PubMed:15799070","PubMed:11212008","PubMed:2914619","PubMed:8239649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"dehydroalanine (Cys)","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Cys->Dha","type":"related"},{"name":"Dehydroalanine (from Cysteine)","type":"exact"},{"name":"Dha","type":"exact"},{"name":"MOD_RES 2,3-didehydroalanine (Cys)","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dHAla(Cys)","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:00793","terms_by_termid":{"MOD:00793":null}}


id: GO:1900551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N',N'',N'''-triacetylfusarinine C.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"N',N'',N'''-triacetylfusarinine C metabolic process","termid":"GO:1900549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"N',N'',N'''-triacetylfusarinine C biosynthetic process","synonyms":[{"name":"N',N'',N'''-triacetylfusarinine C anabolism","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C biosynthesis","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C formation","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C synthesis","type":"exact"}],"termid":"GO:1900551"}


id: GO:0102158
data:
  {"annotated_genes":["SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105356],"is_not":false,"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain (3R)-3-hydroxyacyl-CoA = H2O + a very-long-chain (2E)-enoyl-CoA. This reaction is the third (dehydration) step of the four-step fatty acid elongation cycle in the endoplasmic reticulum that extends fatty acids of C-16 or longer with an additional 2-C unit.","definition_xrefs":["PMID:19763486","RHEA:45812","PMID:16564093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxyacyl-CoA dehydratase activity","termid":"GO:0018812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-11750","EC:4.2.1.134"],"synonyms":[{"name":"very-long-chain 3-hydroxyacyl-CoA dehydratase activity","type":"exact"}],"termid":"GO:0102158","terms_by_termid":{"GO:0102158":null}}


id: PBO:0026656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_glucose_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0026656"}


id: GO:1901686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutathione derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"glutathione derivative metabolic process","termid":"GO:1901685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044248"],"is_obsolete":false,"name":"glutathione derivative catabolic process","synonyms":[{"name":"glutathione derivative breakdown","type":"exact"},{"name":"glutathione derivative catabolism","type":"exact"},{"name":"glutathione derivative degradation","type":"exact"}],"termid":"GO:1901686"}


id: MONDO:1010029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A human disease caused by infection with Aleutian mink disease parvovirus.","definition_xrefs":["PMID:19961696","MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parvoviridae infectious disease","termid":"MONDO:0025371"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aleutian mink disease, human","secondary_identifiers":["ICD9:079.89","SCTID:62251004","MESH:D000453"],"termid":"MONDO:1010029","xrefs":{"Monarch":{"xref_id":"1010029"}}}


id: PBO:0046191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO domain containing 2","termid":"PBO:0046191"}


id: MONDO:0004004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the peripheral motor nerves.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"motor neuron disorder","termid":"MONDO:0020128"},{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"},{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"motor nerve neuritis","secondary_identifiers":["UMLS:C0235025","NCIT:C3500","MEDGEN:68610","DOID:683","MESH:D009443","SCTID:95663000"],"synonyms":[{"name":"motor neuritis","type":"exact"}],"termid":"MONDO:0004004","xrefs":{"Monarch":{"xref_id":"0004004"}}}


id: PBO:0052514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 28","termid":"PBO:0052514"}


id: GO:1902867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["GOC:TermGenie","PMID:16872597","GOC:mr","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of retina development in camera-type eye","termid":"GO:1902866"},{"relation_name":"negatively_regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retina development in camera-type eye","synonyms":[{"name":"down regulation of retina development in camera-style eye","type":"exact"},{"name":"down regulation of retina development in camera-type eye","type":"exact"},{"name":"down regulation of retinal development","type":"related"},{"name":"down-regulation of retina development in camera-style eye","type":"exact"},{"name":"down-regulation of retina development in camera-type eye","type":"exact"},{"name":"down-regulation of retinal development","type":"related"},{"name":"downregulation of retina development in camera-style eye","type":"exact"},{"name":"downregulation of retina development in camera-type eye","type":"exact"},{"name":"downregulation of retinal development","type":"related"},{"name":"inhibition of retina development in camera-style eye","type":"narrow"},{"name":"inhibition of retina development in camera-type eye","type":"narrow"},{"name":"inhibition of retinal development","type":"related"},{"name":"negative regulation of retina development in camera-style eye","type":"exact"},{"name":"negative regulation of retinal development","type":"related"}],"termid":"GO:1902867"}


id: PBO:0027214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_translation_gene_mRNA_during_vegetative_growth","termid":"PBO:0027214"}


id: MONDO:0010305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked creatine transporter deficiency (CRTR-D) is a creatine deficiency syndrome characterized clinically by global developmental delay/ intellectual disability (DD/ID) with prominent speech/language delay, autistic behavior and seizures.","definition_xrefs":["Orphanet:52503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral creatine deficiency syndrome","termid":"MONDO:0000456"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"creatine transporter deficiency","secondary_identifiers":["NORD:1966","UMLS:C1845862","ICD9:758.81","OMIM:300352","SCTID:698290008","NANDO:2201301","NANDO:1201035","GARD:1608","MEDGEN:337451","MESH:C535598","NCIT:C125665","DOID:0050800"],"synonyms":[{"name":"CCDS1","type":"related"},{"name":"SLC6A8 deficiency","type":"exact"},{"name":"X-linked creatine deficiency","type":"related"},{"name":"X-linked creatine deficiency syndrome","type":"related"},{"name":"X-linked creatine transporter deficiency","type":"related"},{"name":"cerebral creatine deficiency syndrome 1","type":"exact"},{"name":"cerebral creatine deficiency syndrome 1, X-linked recessive","type":"exact"},{"name":"cerebral creatine deficiency syndrome type 1","type":"exact"},{"name":"creatine deficiency syndrome, X-linked","type":"related"},{"name":"creatine deficiency, X-linked","type":"related"},{"name":"creatine transporter defect","type":"related"},{"name":"creatine transporter deficiency","type":"exact"},{"name":"intellectual disability, X-linked with seizures, short stature and midface hypoplasia","type":"related"},{"name":"intellectual disability, X-linked, with creatine Transport deficiency","type":"related"},{"name":"intellectual disability, X-linked, with creatine transport deficiency","type":"related"},{"name":"intellectual disability, X-linked, with seizures, short stature, and midface hypoplasia","type":"related"},{"name":"mental retardation, X-linked with seizures, short stature and midface hypoplasia","type":"related"},{"name":"mental retardation, X-linked, with creatine Transport deficiency","type":"related"},{"name":"mental retardation, X-linked, with creatine transport deficiency","type":"related"},{"name":"mental retardation, X-linked, with seizures, short stature, and midface hypoplasia","type":"related"}],"termid":"MONDO:0010305","xrefs":{"Monarch":{"xref_id":"0010305"}}}


id: GO:0120322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A lipid modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to a target lipid.","definition_xrefs":["PMID:34012115","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid modification by small protein conjugation","termid":"GO:0120322"}


id: PBO:0053348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 237","termid":"PBO:0053348"}


id: GO:0046389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyribose 5-phosphate, the phosphorylated sugar 5-phospho-2-deoxyribose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose 5-phosphate metabolic process","synonyms":[{"name":"deoxyribose 5-phosphate metabolism","type":"exact"}],"termid":"GO:0046389"}


id: MONDO:0002660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eyelid disease that is characterized by exacerbations and remissions of eyelid edema, which results in a stretching and subsequent atrophy of the eyelid tissue, leading to the formation of redundant folds over the lid margins.","definition_xrefs":["Wikipedia:Blepharochalasis","DOID:348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blepharochalasis","secondary_identifiers":["ICD9:374.34","MEDGEN:14154","SCTID:47704002","UMLS:C0005742","HP:0010749","ICD10CM:H02.3","icd11.foundation:583527617"],"synonyms":[{"name":"blepharochalasis","type":"exact"},{"name":"blepharochalasis (disease)","type":"exact"}],"termid":"MONDO:0002660","xrefs":{"Monarch":{"xref_id":"0002660"}}}


id: FYPO:0008278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate (5-IP7) is higher than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular myo-inositol level","termid":"FYPO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular 5-IP7 level","termid":"FYPO:0008278"}


id: GO:0019205
data:
  {"annotated_genes":["SJAG_02038","SJAG_01791","SJAG_00533","SJAG_00956","SJAG_02887","SJAG_04693","SJAG_00779","SJAG_01979","SJAG_02680","SJAG_03789","SJAG_04849","SJAG_03708","SJAG_01070","SJAG_04657","SJAG_03798"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004127"},{"annotations":[116285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004001"},{"annotations":[97630,118045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004017"},{"annotations":[87645,93206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046404"},{"annotations":[92970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051736"},{"annotations":[92477,114361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043771"},{"annotations":[90161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051730"},{"annotations":[101729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004385"},{"annotations":[112536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034317"},{"annotations":[99568,117465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004550"},{"annotations":[117996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051731"},{"annotations":[117466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004798"},{"annotations":[115025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"},{"annotations":[117467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009041"},{"annotations":[92478,114363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004849"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_00779":null,"SJAG_00956":null,"SJAG_01070":null,"SJAG_01791":null,"SJAG_01979":null,"SJAG_02038":null,"SJAG_02680":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_03789":null,"SJAG_03798":null,"SJAG_04657":null,"SJAG_04693":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"nucleobase-containing compound kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase, nucleoside, nucleotide kinase activity","type":"related"}],"termid":"GO:0019205","terms_by_termid":{"GO:0004001":null,"GO:0004017":null,"GO:0004127":null,"GO:0004385":null,"GO:0004550":null,"GO:0004798":null,"GO:0004849":null,"GO:0009041":null,"GO:0033862":null,"GO:0034317":null,"GO:0043771":null,"GO:0046404":null,"GO:0051730":null,"GO:0051731":null,"GO:0051736":null}}


id: PBO:0004841
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.3.2.2","termid":"PBO:0004841"}


id: PBO:0030272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_partial_rereplication","termid":"PBO:0030272"}


id: PR:Q10057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein disulfide-isomerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00106","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide-isomerase C1F5.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.02","secondary_identifiers":["UniProtKB:Q10057"],"synonyms":[{"name":"Spom972h-P4HB","type":"exact"}],"termid":"PR:Q10057"}


id: MONDO:0001398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer or tumors of the ureter which may cause obstruction leading to hydroureter, hydronephrosis, and pyelonephritis. hematuria is a common symptom.","definition_xrefs":["MESH:D014516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign urinary system neoplasm","termid":"MONDO:0004180"},{"relation_name":"is_a","term_name":"ureter neoplasm","termid":"MONDO:0021111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureter benign neoplasm","secondary_identifiers":["DOID:11885","UMLS:C0154016","ICD9:223.2","NCIT:C3617","MEDGEN:102303","SCTID:92464009"],"synonyms":[{"name":"benign neoplasm of the ureter","type":"exact"},{"name":"benign neoplasm of ureter","type":"exact"},{"name":"benign tumor of the ureter","type":"exact"},{"name":"benign tumor of ureter","type":"exact"},{"name":"benign tumour of the ureter","type":"exact"},{"name":"benign tumour of ureter","type":"exact"},{"name":"benign ureter neoplasm","type":"exact"},{"name":"benign ureter tumor","type":"exact"},{"name":"benign ureter tumour","type":"exact"},{"name":"benign ureteral neoplasm","type":"exact"},{"name":"benign ureteral tumor","type":"exact"},{"name":"benign ureteral tumour","type":"exact"},{"name":"benign ureteric neoplasm","type":"exact"},{"name":"ureter benign neoplasm","type":"exact"},{"name":"ureteral benign neoplasm","type":"related"},{"name":"ureteral tumor","type":"broad"},{"name":"ureteral tumour","type":"broad"}],"termid":"MONDO:0001398","xrefs":{"Monarch":{"xref_id":"0001398"}}}


id: GO:0009290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of DNA into a cell that contributes to the process of transformation, the uptake of foreign genetic material into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA transport","termid":"GO:0051027"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"part_of","term_name":"DNA-mediated transformation","termid":"GO:0009294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"DNA import into cell involved in transformation","synonyms":[{"name":"DNA import into cell","type":"broad"},{"name":"DNA transport into cell during transformation","type":"related"},{"name":"cellular DNA import during transformation","type":"related"},{"name":"cellular DNA uptake","type":"broad"}],"termid":"GO:0009290"}


id: PBO:0054743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2152","termid":"PBO:0054743"}


id: GO:1902660
data:
  {"annotated_genes":["SJAG_04551","SJAG_02481","SJAG_00424","SJAG_00610","SJAG_02311","SJAG_01245","SJAG_02426","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88949,101632,102330],"is_not":false,"summary":null,"term":"GO:1902660"},{"annotations":[99932,107434,92254,91596,115826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucose mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:di","PMID:24277933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of glucose mediated signaling pathway","termid":"GO:1902659"},{"relation_name":"negatively_regulates","term_name":"glucose mediated signaling pathway","termid":"GO:0010255"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucose mediated signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of glucose mediated signaling pathway","type":"exact"},{"name":"down regulation of glucose mediated signalling","type":"exact"},{"name":"down-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"down-regulation of glucose mediated signalling","type":"exact"},{"name":"downregulation of glucose mediated signaling pathway","type":"exact"},{"name":"downregulation of glucose mediated signalling","type":"exact"},{"name":"inhibition of glucose mediated signaling pathway","type":"narrow"},{"name":"inhibition of glucose mediated signalling","type":"narrow"},{"name":"negative regulation of glucose mediated signalling","type":"exact"}],"termid":"GO:1902660","terms_by_termid":{"GO:0110034":null,"GO:1902660":null}}


id: GO:1901861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle tissue development.","definition_xrefs":["PMID:23150719","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle tissue development","termid":"GO:1901861"}


id: GO:0102332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: malonyl-CoA + H+ + a long-chain acyl-[acp] + a reduced electron acceptor = 2 carbon dioxide + coenzyme A + a terminal olefin + a holo-[acyl-carrier protein] + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete fatty-acyl-[acp] elongase/decarboxylase activity (obsolete GO:0102332)","termid":"GO:0102332"}


id: GO:0050914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a salty taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of salty taste","synonyms":[{"name":"salty taste perception","type":"exact"}],"termid":"GO:0050914"}


id: GO:1903138
data:
  {"annotated_genes":["SJAG_04522","SJAG_04825","SJAG_03263","SJAG_01114","SJAG_02392","SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95355,98939,103288,106512,107076,117751],"is_not":false,"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a cell integrity MAPK cascade.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of stress-activated MAPK cascade","termid":"GO:0032873"},{"relation_name":"is_a","term_name":"regulation of cell integrity MAPK cascade","termid":"GO:1903137"},{"relation_name":"negatively_regulates","term_name":"cell integrity MAPK cascade","termid":"GO:0000196"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cell integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inhibition of Mpk1 cascade","type":"narrow"},{"name":"inhibition of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"inhibition of cell wall biogenesis, MAPKKK cascade","type":"narrow"},{"name":"negative regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"negative regulation of Mpk1 cascade","type":"narrow"},{"name":"negative regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"negative regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"negative regulation of cell integrity MAPK pathway","type":"exact"},{"name":"negative regulation of cell wall integrity MAPK cascade","type":"narrow"}],"termid":"GO:1903138","terms_by_termid":{"GO:1903138":null}}


id: PBO:0082247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0082247"}


id: PBO:0044521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAB1 antisense RNA 1","termid":"PBO:0044521"}


id: GO:0031718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 cannabinoid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid receptor binding","termid":"GO:0031717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 1 cannabinoid receptor binding","synonyms":[{"name":"type 1 cannabinoid receptor ligand","type":"narrow"}],"termid":"GO:0031718"}


id: PBO:0077243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 4","termid":"PBO:0077243"}


id: PBO:0046697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS1 antisense RNA 1","termid":"PBO:0046697"}


id: GO:0071772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bone morphogenetic protein (BMP) stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to BMP","synonyms":[{"name":"response to BMP stimulus","type":"exact"},{"name":"response to bone morphogenetic protein stimulus","type":"exact"}],"termid":"GO:0071772"}


id: PBO:0073589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase 1","termid":"PBO:0073589"}


id: GO:0034665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha1 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"integrin alpha1-beta1 complex","synonyms":[{"name":"ITGA1-ITGB1 complex","type":"narrow"},{"name":"VLA-1 complex","type":"exact"},{"name":"alpha1-beta1 integrin complex","type":"exact"}],"termid":"GO:0034665"}


id: FYPO:0007172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of micafungin. Normally, wild-type cell populations survive longer in the presence of micafungin than in its absence.","definition_xrefs":["PMID:31601154","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"stationary phase viability unaffected by micafungin","synonyms":[{"name":"chronological lifespan unaffected by micafungin","type":"related"},{"name":"loss of chronological lifespan extension by micafungin","type":"related"},{"name":"loss of stationary phase viability extension in presence of micafungin","type":"exact"}],"termid":"FYPO:0007172"}


id: GO:0098554
data:
  {"annotated_genes":["SJAG_04583","SJAG_02102","SJAG_01307","SJAG_04018","SJAG_03311","SJAG_00747","SJAG_03056","SJAG_02196","SJAG_04821"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93398,94220,94580,97845,98182,101787,105306,109306,116179],"is_not":false,"summary":null,"term":"GO:0098554"}]},"cv_name":"cellular_component","definition":"The side (leaflet) of the plasma membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00747":null,"SJAG_01307":null,"SJAG_02102":null,"SJAG_02196":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_04018":null,"SJAG_04583":null,"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic side of endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098554","terms_by_termid":{"GO:0098554":null}}


id: MONDO:0006459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thymic epithelial neoplasm characterized by the presence of expanded areas which resemble the normal thymic cortex. The neoplastic epithelial cells are small and scant and there is a dense T-lymphocytic component present. Areas of medullary differentiation with or without Hassall's corpuscles are also present. It may be associated with myasthenia gravis, pure red cell aplasia, and hypogammaglobulinemia. It has a low grade malignant potential. The majority of cases occur in the anterior mediastinum as Masaoka stage I tumors. A minority of the cases occur as stage II tumors.","definition_xrefs":["NCIT:C6887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymoma type B","termid":"MONDO:0016974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thymoma type B1","secondary_identifiers":["EFO:1000584","UMLS:C1266094","DOID:6917","ICDO:8583/1","MEDGEN:224761"],"synonyms":[{"name":"lymphocyte-predominant thymoma","type":"exact"},{"name":"lymphocyte-rich thymoma","type":"exact"},{"name":"organoid thymoma","type":"exact"},{"name":"predominantly cortical thymoma","type":"exact"},{"name":"thymoma type B1","type":"exact"},{"name":"thymoma, organoid","type":"exact"}],"termid":"MONDO:0006459","xrefs":{"Monarch":{"xref_id":"0006459"}}}


id: MONDO:0007300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma involving a telencephalon.","definition_xrefs":["MONDO:patterns/sarcoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain sarcoma","termid":"MONDO:0002216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cerebral sarcoma","secondary_identifiers":["OMIM:117600","UMLS:C1861714","MESH:C537946","MEDGEN:350081","GARD:10073"],"synonyms":[{"name":"cerebral sarcoma","type":"exact"},{"name":"sarcoma of telencephalon","type":"exact"},{"name":"telencephalon sarcoma","type":"exact"}],"termid":"MONDO:0007300","xrefs":{"Monarch":{"xref_id":"0007300"}}}


id: GO:0120072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of any pyloric antrum smooth muscle contraction.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120071"},{"relation_name":"is_a","term_name":"positive regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904306"},{"relation_name":"positively_regulates","term_name":"pyloric antrum smooth muscle contraction","termid":"GO:0120065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120072"}


id: GO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"folic acid binding","synonyms":[{"name":"folate binding","type":"exact"},{"name":"vitamin B9 binding","type":"exact"},{"name":"vitamin M binding","type":"exact"}],"termid":"GO:0005542"}


id: MONDO:0968983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proteosome-associated autoinflammatory syndrome","termid":"MONDO:0009726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"proteasome-associated autoinflammatory syndrome 6","secondary_identifiers":["OMIM:620796"],"termid":"MONDO:0968983","xrefs":{"Monarch":{"xref_id":"0968983"}}}


id: MONDO:0022196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic erosive gastritis","secondary_identifiers":["UMLS:C0267145","ICD9:535.40","MEDGEN:78626","SCTID:63137003"],"synonyms":[{"name":"ceg - chronic erosive gastritis","type":"related"},{"name":"chronic erosive gastritis","type":"exact"},{"name":"diffuse varioliform gastritis","type":"related"},{"name":"idiopathic chronic, erosive gastritis","type":"related"},{"name":"varioliform gastritis","type":"related"}],"termid":"MONDO:0022196","xrefs":{"Monarch":{"xref_id":"0022196"}}}


id: GO:1904826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hydrogen sulfide biosynthetic process.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF","GOC:rph","GOC:TermGenie","PMID:22034194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"hydrogen sulfide biosynthetic process","termid":"GO:0070814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen sulfide biosynthetic process","synonyms":[{"name":"regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"regulation of hydrogen sulfide formation","type":"exact"},{"name":"regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"regulation of hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:1904826"}


id: PBO:0028203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028203"}


id: FYPO:0003650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to glucose starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during cellular response to glucose starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to glucose starvation","type":"related"},{"name":"decreased protein level during cellular response to glucose depletion","type":"exact"},{"name":"decreased protein level during cellular response to glucose deprivation","type":"exact"},{"name":"decreased protein level during cellular response to glucose limitation","type":"related"},{"name":"decreased protein level during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"decreased protein level during glucose starvation","type":"exact"},{"name":"reduced protein level during cellular response to glucose starvation","type":"exact"}],"termid":"FYPO:0003650"}


id: PBO:0082681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-II complex; contains the GLUE (GRAM Like Ubiquitin binding in EAP45) domain which is involved in interactions with ESCRT-I and ubiquitin-dependent sorting of proteins into the endosome; plays a role in the formation of mutant huntingtin (Htt) aggregates in yeast","termid":"PBO:0082681"}


id: GO:0009522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).","definition_xrefs":["GOC:mah","ISBN:0140514031","PMID:9821949","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem","termid":"GO:0009521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"photosystem I","termid":"GO:0009522"}


id: PBO:0068029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 334","termid":"PBO:0068029"}


id: PBO:0056954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 18b","termid":"PBO:0056954"}


id: PBO:0017910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Mis13","termid":"PBO:0017910"}


id: PBO:0034708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WLM domain metallopeptidase implicated in DNA repair Wss1 (predicted)","termid":"PBO:0034708"}


id: GO:0070704
data:
  {"annotated_genes":["SJAG_03509","SJAG_03249","SJAG_00717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000249"},{"annotations":[106996,89172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000248"},{"annotations":[89173,106997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050046"}]},"cv_name":"molecular_function","definition":"Catalysis of the introduction of a double bond into a sterol molecule.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03249":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sterol desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070704","terms_by_termid":{"GO:0000248":null,"GO:0000249":null,"GO:0050046":null}}


id: GO:0002420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a tumor cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors.","definition_xrefs":["PMID:16730260","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell mediated immune response to tumor cell","termid":"GO:0002423"},{"relation_name":"is_a","term_name":"natural killer cell mediated cytotoxicity","termid":"GO:0042267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"NK cell mediated cytotoxicity directed against tumor cell target","type":"exact"}],"termid":"GO:0002420"}


id: PBO:0071975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 3","termid":"PBO:0071975"}


id: PBO:0059551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Ser (UCN) 1","termid":"PBO:0059551"}


id: GO:0071396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipid","termid":"GO:0071396"}


id: PBO:0081282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 57","termid":"PBO:0081282"}


id: PBO:0114345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter family, related to 7-keto 8-aminopelargonic acid transporter","termid":"PBO:0114345"}


id: PBO:0047600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHIP1A divergent transcript","termid":"PBO:0047600"}


id: PBO:0004327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase delta subunit (predicted)","termid":"PBO:0004327"}


id: GO:1902883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to oxidative stress.","definition_xrefs":["GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:16899554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to oxidative stress","termid":"GO:1902882"},{"relation_name":"negatively_regulates","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to oxidative stress","synonyms":[{"name":"down regulation of response to oxidative stress","type":"exact"},{"name":"down-regulation of response to oxidative stress","type":"exact"},{"name":"downregulation of response to oxidative stress","type":"exact"},{"name":"inhibition of response to oxidative stress","type":"narrow"}],"termid":"GO:1902883"}


id: GO:0048479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the style over time, from its formation to the mature structure. The style is an elongated part of a carpel, or group of fused carpels, and it lies between the ovary and the stigma.","definition_xrefs":["GOC:jid","PO:0009074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"carpel development","termid":"GO:0048440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"style development","termid":"GO:0048479"}


id: PBO:0004936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nop16 (predicted)","termid":"PBO:0004936"}


id: GO:0047075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O2 + 2,5-dihydroxypyridine = formate + maleamate.","definition_xrefs":["MetaCyc:1.13.11.9-RXN","EC:1.13.11.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2,5-dihydroxypyridine 5,6-dioxygenase activity","secondary_identifiers":["RHEA:27522","UM-BBD_reactionID:r1443"],"synonyms":[{"name":"2,5-dihydroxypyridine oxygenase activity","type":"related"},{"name":"2,5-dihydroxypyridine:oxygen 5,6-oxidoreductase activity","type":"related"},{"name":"pyridine-2,5-diol dioxygenase activity","type":"related"}],"termid":"GO:0047075"}


id: PBO:0069648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 925, pseudogene","termid":"PBO:0069648"}


id: PBO:0059562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1F","termid":"PBO:0059562"}


id: GO:0052457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont nitric oxide production (obsolete GO:0052457)","synonyms":[{"name":"modulation by organism of defense-related symbiont NO production","type":"exact"},{"name":"modulation by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052457"}


id: PBO:0055952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 61","termid":"PBO:0055952"}


id: PBO:0081466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 337","termid":"PBO:0081466"}


id: PBO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rothmund-Thomsom syndrome","termid":"PBO:0002374"}


id: GO:0030145
data:
  {"annotated_genes":["SJAG_00181","SJAG_01254","SJAG_03398","SJAG_05010","SJAG_03303","SJAG_04407","SJAG_02247","SJAG_05373","SJAG_03744","SJAG_01896"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87761,88016,88068,88497,91066,96854,99345,105226,105380,112650,115105],"is_not":false,"summary":null,"term":"GO:0030145"}]},"cv_name":"molecular_function","definition":"Binding to a manganese ion (Mn).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_01254":null,"SJAG_01896":null,"SJAG_02247":null,"SJAG_03303":null,"SJAG_03398":null,"SJAG_03744":null,"SJAG_04407":null,"SJAG_05010":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0046872"],"is_obsolete":false,"name":"manganese ion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mn binding","type":"exact"},{"name":"manganese binding","type":"exact"}],"termid":"GO:0030145","terms_by_termid":{"GO:0030145":null}}


id: PBO:0066732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 29","termid":"PBO:0066732"}


id: PBO:0041749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin binding transcription activator 2","termid":"PBO:0041749"}


id: MONDO:0006639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually large (greater than 5cm), malignant epithelial tumor arising from the adrenal cortical cells. Symptoms are usually related to the excessive production of hormones, and include Cushing's syndrome and virilism in women. Common sites of metastasis include liver, lung, bone, and retroperitoneal lymph nodes. Advanced radiologic procedures have enabled the detection of small tumors, resulting in the improvement of the 5-year survival.","definition_xrefs":["NCIT:C9325"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete ACTH-independent Cushing syndrome due to rare cortisol-producing adrenal tumor (obsolete MONDO:0018627)","termid":"MONDO:0018627"},{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"adrenal carcinoma","termid":"MONDO:0002814"},{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"},{"relation_name":"is_a","term_name":"malignant tumor of adrenal cortex","termid":"MONDO:0021312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"adrenal cortex carcinoma","secondary_identifiers":["DOID:3948","GARD:558","UMLS:C0206686","DOID:660","MEDGEN:104917","EFO:1000796","NANDO:2200073","ONCOTREE:ACC","DOID:3959","ICDO:8370/3","NORD:733","Orphanet:1501","SCTID:255035007","NCIT:C2858","HP:0006744","MedDRA:10001388"],"synonyms":[{"name":"ACC","type":"exact"},{"name":"Adenoid Cystic Carcinoma","type":"exact"},{"name":"adenocarcinoma, adrenocortical, malignant","type":"exact"},{"name":"adrenal cortex adenocarcinoma","type":"exact"},{"name":"adrenal cortex cancer","type":"broad"},{"name":"adrenal cortex carcinoma","type":"exact"},{"name":"adrenal cortical adenocarcinoma","type":"exact"},{"name":"adrenal cortical carcinoma","type":"exact"},{"name":"adrenal cortical carcinoma (morphologic abnormality)","type":"exact"},{"name":"adrenal cortical tumors","type":"broad"},{"name":"adrenal cortical tumours","type":"broad"},{"name":"adrenocortical cancer","type":"broad"},{"name":"adrenocortical carcinoma","type":"exact"},{"name":"adrenocortical carcinoma (disease)","type":"exact"},{"name":"cancer of the adrenal cortex","type":"broad"},{"name":"carcinoma of adrenal cortex","type":"exact"},{"name":"carcinoma of the adrenal cortex","type":"exact"},{"name":"carcinoma, adrenocortical, malignant","type":"exact"},{"name":"cortical cell carcinoma","type":"exact"},{"name":"malignant adrenocortical tumor","type":"broad"},{"name":"malignant adrenocortical tumour","type":"broad"},{"name":"malignant neoplasm of adrenal cortex","type":"broad"},{"name":"malignant tumor of adrenal cortex","type":"broad"},{"name":"malignant tumour of adrenal cortex","type":"broad"}],"termid":"MONDO:0006639","xrefs":{"Monarch":{"xref_id":"0006639"}}}


id: GO:0031661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G2/M transition of the cell cycle.","definition_xrefs":["GOC:mah","GOC:dph","GOC:pr","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle (obsolete GO:0031661)","synonyms":[{"name":"G2/M-specific down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific inhibition of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G2/M-specific negative regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of cyclin-dependent protein kinase activity during G2/M","type":"related"},{"name":"negative regulation of cyclin-dependent protein kinase activity involved in G2/M","type":"broad"}],"termid":"GO:0031661"}


id: PBO:0073100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 4","termid":"PBO:0073100"}


id: PBO:0056143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis 1 associated protein","termid":"PBO:0056143"}


id: MONDO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from the upper or lower eyelid.","definition_xrefs":["NCIT:C4358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous melanoma","termid":"MONDO:0005012"},{"relation_name":"is_a","term_name":"ocular melanoma","termid":"MONDO:0006325"},{"relation_name":"is_a","term_name":"eyelid cancer","termid":"MONDO:0021313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"eyelid melanoma","secondary_identifiers":["ICD9:172.1","DOID:10040","UMLS:C0339116","MEDGEN:90937","SCTID:231834005"],"synonyms":[{"name":"eyelid melanoma","type":"exact"},{"name":"eyelid melanoma (disease)","type":"exact"},{"name":"malignant eyelid melanoma","type":"exact"},{"name":"malignant melanoma of eyelid","type":"exact"},{"name":"malignant melanoma of the eyelid","type":"exact"},{"name":"melanoma (disease) of eyelid","type":"exact"},{"name":"melanoma of eyelid","type":"exact"},{"name":"melanoma of the eyelid","type":"exact"}],"termid":"MONDO:0000928","xrefs":{"Monarch":{"xref_id":"0000928"}}}


id: GO:0034231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of mature islet amyloid polypeptide (IAPP) by posttranslational processing of pro-islet amyloid polypeptide (pro-IAPP).","definition_xrefs":["PMID:8262946","GOC:BHF","GOC:rl","PMID:15983213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"islet amyloid polypeptide processing","synonyms":[{"name":"IAPP formation","type":"exact"},{"name":"IAPP processing","type":"exact"},{"name":"islet amyloid peptide formation","type":"exact"},{"name":"islet amyloid peptide processing","type":"exact"},{"name":"islet amyloid polypeptide formation","type":"related"}],"termid":"GO:0034231"}


id: RO:0002509
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"s 'determined by part of' w if and only if there exists some f such that (1) s 'determined by' f and (2) f part_of w, or f=w.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"causal_relation_between_material_entities","termid":"RO:0002506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"determined_by_part_of","termid":"RO:0002509"}


id: PR:Q9C1W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mim1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1W7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.08","synonyms":[{"name":"Spom972h-mim1","type":"exact"}],"termid":"PR:Q9C1W7"}


id: GO:1900157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone mineralization involved in bone maturation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone mineralization","termid":"GO:0030500"},{"relation_name":"regulates","term_name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone mineralization involved in bone maturation","termid":"GO:1900157"}


id: GO:0090340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of secretion of lysosomal enzymes","termid":"GO:0090182"},{"relation_name":"positively_regulates","term_name":"secretion of lysosomal enzymes","termid":"GO:0033299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of secretion of lysosomal enzymes","termid":"GO:0090340"}


id: PBO:0082056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease","termid":"PBO:0082056"}


id: PBO:0078264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 2-2","termid":"PBO:0078264"}


id: PBO:0076185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ubiquitin like modifier 1","termid":"PBO:0076185"}


id: MONDO:0013597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited bleeding disorder, platelet-type in which the cause of the disease is a mutation in the TBXAS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 14","secondary_identifiers":["MEDGEN:98307","MESH:C562866","OMIM:614158","SCTID:234477002","UMLS:C0398635","DOID:0111047"],"synonyms":[{"name":"BDPLT14","type":"exact"},{"name":"TBXAS1 inherited bleeding disorder, platelet-type","type":"exact"},{"name":"bleeding disorder, platelet-type, 14","type":"related"},{"name":"inherited bleeding disorder, platelet-type caused by mutation in TBXAS1","type":"exact"},{"name":"thromboxane synthase deficiency","type":"exact"},{"name":"thromboxane synthetase deficiency","type":"related"}],"termid":"MONDO:0013597","xrefs":{"Monarch":{"xref_id":"0013597"}}}


id: PBO:0079085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 2-1","termid":"PBO:0079085"}


id: GO:0033175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. All non-F1 subunits of the chloroplast hydrogen-transporting ATP synthase, including integral and peripheral chloroplast thylakoid membrane proteins.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast proton-transporting ATP synthase complex, coupling factor CF(o) (obsolete GO:0033175)","synonyms":[{"name":"chloroplast proton-transporting ATP synthase complex, coupling factor CF(0)","type":"exact"},{"name":"chloroplast proton-transporting F-type ATPase complex, coupling factor CF(o)","type":"exact"}],"termid":"GO:0033175"}


id: PBO:0078791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 14-1","termid":"PBO:0078791"}


id: PR:Q09154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b-c1 complex subunit Rieske, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03211","PANTHER:PTHR10134:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit Rieske, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.06","secondary_identifiers":["UniProtKB:Q09154"],"synonyms":[{"name":"RISP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UQCRFS1","type":"exact"},{"name":"complex III subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rieske iron-sulfur protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase iron-sulfur subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09154"}


id: PBO:0056828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltase-glucoamylase 2 (putative)","termid":"PBO:0056828"}


id: MONDO:0020764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brown-Pearce carcinoma","secondary_identifiers":["MESH:D002284","EFO:1001278"],"synonyms":[{"name":"Brown-Pearce carcinoma","type":"exact"},{"name":"Brown-Pearce epithelioma","type":"exact"},{"name":"Brown-Pearce tumor","type":"exact"},{"name":"Brown-Pearce tumour","type":"exact"},{"name":"carcinoma, Brown Pearce","type":"exact"},{"name":"carcinoma, Brown-Pearce","type":"exact"},{"name":"epithelioma, Brown Pearce","type":"exact"},{"name":"epithelioma, Brown-Pearce","type":"exact"}],"termid":"MONDO:0020764","xrefs":{"Monarch":{"xref_id":"0020764"}}}


id: MONDO:0003774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the cerebral sulcus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral meningioma","termid":"MONDO:0003772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cerebral convexity meningioma","secondary_identifiers":["DOID:6114","MEDGEN:155844","NCIT:C4959","UMLS:C0751303"],"synonyms":[{"name":"cerebral hemispheric convexity meningioma","type":"exact"}],"termid":"MONDO:0003774","xrefs":{"Monarch":{"xref_id":"0003774"}}}


id: PBO:0043369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clusterin associated protein 1","termid":"PBO:0043369"}


id: MONDO:0011238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant chondrodysplasia punctata","termid":"MONDO:0007321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"chondrodysplasia punctata, brachytelephalangic, autosomal","secondary_identifiers":["OMIM:602497","UMLS:C1844853","GARD:15347","MEDGEN:337102"],"synonyms":[{"name":"brachytelephalangic chondrodysplasia punctata","type":"related"},{"name":"chondrodysplasia punctata, brachytelephalangic, autosomal","type":"exact"}],"termid":"MONDO:0011238","xrefs":{"Monarch":{"xref_id":"0011238"}}}


id: MONDO:0022945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness peripheral neuropathy arterial disease","termid":"MONDO:0022945","xrefs":{"Monarch":{"xref_id":"0022945"}}}


id: MONDO:0014577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous mutation in the CEP120 gene on chromosome 5q23.","definition_xrefs":["DOID:0110093","PMID:25361962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 13 with or without polydactyly","secondary_identifiers":["GARD:16079","OMIM:616300","MEDGEN:898712","UMLS:C4225378"],"synonyms":[{"name":"SRTD13","type":"exact"},{"name":"short-rib thoracic dysplasia 13 with or without polydactyly","type":"exact"}],"termid":"MONDO:0014577","xrefs":{"Monarch":{"xref_id":"0014577"}}}


id: PBO:0068000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 302","termid":"PBO:0068000"}


id: MONDO:0100399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(3;3)(q21.3;q26.2). (A cytogenetic abnormality that refers to the translocation where both breakpoints are on the long arm (q23.1 and q26.2) of chromosome 3. It is associated with acute myeloid leukemia.)","definition_xrefs":["NCIT:C36406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(3;3)(q21.3;q26.2)","secondary_identifiers":["NCIT:C122717"],"synonyms":[{"name":"AML, t(3;3)(q21.3;q26.2)","type":"exact"},{"name":"AML, t(3;3)(q21.3q26.2)","type":"exact"},{"name":"AML, t(3;3)(q21;q26.2)","type":"exact"},{"name":"AML, t(3;3)(q26;q21)","type":"exact"}],"termid":"MONDO:0100399","xrefs":{"Monarch":{"xref_id":"0100399"}}}


id: PBO:0073442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor proline and glutamine rich","termid":"PBO:0073442"}


id: PBO:0088784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA translocase Rdh54","termid":"PBO:0088784"}


id: MONDO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection of cutaneous and subcutaneous tissue that consists of a cluster of boils. Commonly, the causative agent is staphylococcus aureus. Carbuncles produce fever, leukocytosis, extreme pain, and prostration.","definition_xrefs":["MESH:D002270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma","termid":"MONDO:0002922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"carbuncle","secondary_identifiers":["SCTID:416893007","MEDGEN:2866","icd11.foundation:1456834066","UMLS:C0007078","ICD9:680.8","DOID:2176","ICD9:680.9"],"synonyms":[{"name":"carbuncle and furuncle of any part of face except eye","type":"exact"},{"name":"carbuncle and furuncle of buttock","type":"exact"},{"name":"carbuncle and furuncle of face","type":"exact"},{"name":"carbuncle and furuncle of foot","type":"exact"},{"name":"carbuncle and furuncle of gluteal region","type":"exact"},{"name":"carbuncle and furuncle of hand","type":"exact"},{"name":"carbuncle and furuncle of leg except foot","type":"exact"},{"name":"carbuncle and furuncle of neck","type":"exact"},{"name":"carbuncle and furuncle of trunk","type":"exact"},{"name":"carbuncle and furuncle of upper arm and forearm","type":"exact"}],"termid":"MONDO:0002237","xrefs":{"Monarch":{"xref_id":"0002237"}}}


id: PBO:0061396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide A","termid":"PBO:0061396"}


id: MOD:02037
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, Hex(7) HexNAc(2)","definition_xrefs":["PubMed:33135055","Unimod:1480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex7HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"M7/Man7","type":"related"}],"termid":"MOD:02037"}


id: PBO:0027534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ATP-dependent_5'-3'_DNA_helicase_activity","termid":"PBO:0027534"}


id: PBO:0057049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 136","termid":"PBO:0057049"}


id: PBO:0089655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Brx1","termid":"PBO:0089655"}


id: GO:0033266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of choline across a membrane.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline transmembrane transporter activity","termid":"GO:0015220"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type choline transporter activity","synonyms":[{"name":"ABC-type choline transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent choline transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled choline transmembrane transporter activity","type":"related"},{"name":"choline-transporting ATPase activity","type":"related"}],"termid":"GO:0033266"}


id: MONDO:1010512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in pigs in which the cause of the disease is a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, pig","termid":"MONDO:1010460"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, SGCD-related, pig","secondary_identifiers":["OMIA:002211-9823"],"termid":"MONDO:1010512","xrefs":{"Monarch":{"xref_id":"1010512"}}}


id: PBO:0087333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specialized J-protein that functions in Fe-S cluster biogenesis; functions with Hsp70 in Fe-S cluster biogenesis in mitochondria; involved in iron metabolism; contains a J domain typical to J-type chaperones; localizes to the mitochondrial matrix","termid":"PBO:0087333"}


id: PBO:0049911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexosaminidase D","termid":"PBO:0049911"}


id: FYPO:0002533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abnormal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide","synonyms":[{"name":"abnormal protein localisation to nucleoplasm during cellular response to hydrogen peroxide","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during cellular response to H2O2","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0002533"}


id: MONDO:0021109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endophytic lesion in the urinary tract which shares several morphologic features with urothelial papilloma. This lesion may recur after complete excision. Transitional cell carcinomas may arise within inverted urothelial papillomas.","definition_xrefs":["NCIT:C6192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted transitional cell papilloma","termid":"MONDO:0003064"},{"relation_name":"is_a","term_name":"urothelial papilloma","termid":"MONDO:0004041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted urothelial papilloma","secondary_identifiers":["ONCOTREE:IUP","MEDGEN:233583","UMLS:C1334282"],"synonyms":[{"name":"IUP","type":"related"},{"name":"inverted papilloma of urinary tract","type":"exact"},{"name":"inverted urothelial papilloma","type":"exact"},{"name":"urinary tract inverted papilloma","type":"exact"},{"name":"urothelium inverted papilloma","type":"exact"}],"termid":"MONDO:0021109","xrefs":{"Monarch":{"xref_id":"0021109"}}}


id: PBO:0077441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 176A","termid":"PBO:0077441"}


id: PBO:0079679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3A pseudogene 1","termid":"PBO:0079679"}


id: PBO:0057425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548y","termid":"PBO:0057425"}


id: MONDO:0006358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive squamous cell carcinoma that arises from the parotid gland. It usually affects elderly patients and presents as a rapidly enlarging tumor mass, often associated with pain.","definition_xrefs":["NCIT:C5942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma of parotid gland","termid":"MONDO:0021331"},{"relation_name":"is_a","term_name":"salivary gland squamous cell carcinoma","termid":"MONDO:0044740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"parotid gland squamous cell carcinoma","secondary_identifiers":["UMLS:C1335367","EFO:1000463","MEDGEN:233317"],"synonyms":[{"name":"parotid gland squamous cell carcinoma","type":"exact"},{"name":"parotid squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of parotid","type":"exact"},{"name":"squamous cell carcinoma of parotid gland","type":"exact"},{"name":"squamous cell carcinoma of the parotid","type":"exact"},{"name":"squamous cell carcinoma of the parotid gland","type":"exact"}],"termid":"MONDO:0006358","xrefs":{"Monarch":{"xref_id":"0006358"}}}


id: PBO:0074549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 1","termid":"PBO:0074549"}


id: PBO:0082801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of transport protein particle (TRAPP) complex III; TRAPPIII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating endosome-Golgi traffic and required for membrane expansion during autophagy and the CVT pathway; directs Ypt1p to the PAS; late post-replication meiotic role","termid":"PBO:0082801"}


id: PBO:0043143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 11","termid":"PBO:0043143"}


id: PBO:0086289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in determining mitochondrial architecture; inner membrane protein that interacts physically and genetically with the MICOS complex and is required for its integrity","termid":"PBO:0086289"}


id: PBO:0085832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery, cytoplasm, bud, and bud neck; potential Cdc28p substrate; similar to Skg4p; relocalizes from bud neck to cytoplasm upon DNA replication stress; SKG3 has a paralog, CAF120, that arose from the whole genome duplication","termid":"PBO:0085832"}


id: PBO:0079135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin associated factor X","termid":"PBO:0079135"}


id: PBO:0073745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3 pseudogene 1","termid":"PBO:0073745"}


id: PBO:0056305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 1 pseudogene 1","termid":"PBO:0056305"}


id: PBO:0088296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21","termid":"PBO:0088296"}


id: PR:Q10268
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mac1 gene.","definition_xrefs":["UniProtKB:Q10268","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-anchored protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.04c","synonyms":[{"name":"Spom972h-mac1","type":"exact"}],"termid":"PR:Q10268"}


id: GO:1903133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tube lumen cavitation.","definition_xrefs":["GOC:dph","PMID:22898778","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of tube lumen cavitation","termid":"GO:1903132"},{"relation_name":"negatively_regulates","term_name":"tube lumen cavitation","termid":"GO:0060605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tube lumen cavitation","synonyms":[{"name":"inhibition of tube lumen cavitation","type":"narrow"}],"termid":"GO:1903133"}


id: MONDO:1012589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in Japanese medaka due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, Japanese medaka","secondary_identifiers":["OMIA:000202-8090"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Oryzias latipes (Japanese medaka)","type":"exact"}],"termid":"MONDO:1012589","xrefs":{"Monarch":{"xref_id":"1012589"}}}


id: PBO:0065428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 1","termid":"PBO:0065428"}


id: GO:0080157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving plant-type cell wall organization or biogenesis. Plant-type cell wall organization or biogenesis is a process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellulose- and pectin-containing cell wall.","definition_xrefs":["PMID:20530756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"regulates","term_name":"plant-type cell wall organization or biogenesis","termid":"GO:0071669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"regulation of plant-type cell wall organization or biogenesis","synonyms":[{"name":"regulation of plant-type cell wall organisation or biogenesis","type":"exact"}],"termid":"GO:0080157"}


id: PBO:0042136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholecystokinin B receptor","termid":"PBO:0042136"}


id: GO:0042160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the covalent alteration of one or more amino acid or lipid residues occurring in a lipoprotein, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein modification","termid":"GO:0042160"}


id: GO:0009050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycopeptides, a compound in which carbohydrate is covalently attached to an oligopeptide composed of residues of L and/or D-amino acids. The term usually denotes a product of proteolytic degradation of a glycoprotein but includes glycated peptide.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycopeptide catabolic process","synonyms":[{"name":"glycopeptide breakdown","type":"exact"},{"name":"glycopeptide catabolism","type":"exact"},{"name":"glycopeptide degradation","type":"exact"}],"termid":"GO:0009050"}


id: GO:0102607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3beta-hydroxy-12,15-cassadiene-11-one + NADPH + O2 + H+ = 2beta,3beta-dihydroxy-12,15-cassadiene-11-one + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3beta-hydroxy-12,15-cassadiene-11-one 2-hydroxylase activity (obsolete GO:0102607)","termid":"GO:0102607"}


id: PBO:0083635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3); involved in the assembly of preinitiation complex and start codon selection; eIF3 is also involved in programmed stop codon readthrough","termid":"PBO:0083635"}


id: MONDO:0016782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor developmental delay due to 14q32.2 paternally expressed gene defect","termid":"MONDO:0014541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal 14q32.2 hypomethylation syndrome","secondary_identifiers":["MEDGEN:1842839","Orphanet:254531","UMLS:C5680721","GARD:17222"],"termid":"MONDO:0016782","xrefs":{"Monarch":{"xref_id":"0016782"}}}


id: PBO:0015712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase I involved in 7,8-dihydroneopterin 3'-triphosphate biosynthesis (predicted)","termid":"PBO:0015712"}


id: PBO:0044547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein 3 pseudogene 1","termid":"PBO:0044547"}


id: MONDO:1010792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited syndrome characterized by hypotrichosis (sparseness of hair), hypo- or an-hidrosis (reduced ability to sweat), and hypodontia (congenital absence of teeth) in cattle due to a variation in the EDAR gene.","definition_xrefs":["PMID:28904385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anhidrotic ectodermal dysplasia EDAR-related, cattle","secondary_identifiers":["OMIA:002128-9913"],"termid":"MONDO:1010792","xrefs":{"Monarch":{"xref_id":"1010792"}}}


id: GO:0103063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP(4-) + H2O + a trans-keto-C61-meroacyl-[acp] = diphosphoric acid + a trans-keto-meroacyl-adenylate + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-keto-C61-meroacyl-AMP ligase activity (obsolete GO:0103063)","termid":"GO:0103063"}


id: GO:0043628
data:
  {"annotated_genes":["SJAG_01867","SJAG_01836","SJAG_02622","SJAG_04942","SJAG_01176","SJAG_02725","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91373,92333,117555],"is_not":false,"summary":null,"term":"GO:0043628"},{"annotations":[87891,117529,117417,107246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990431"},{"annotations":[107248,117532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990432"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a regulatory non-coding RNA molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"},{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01836":null,"SJAG_01867":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02725":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulatory ncRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ncRNA 3' end processing","type":"broad"},{"name":"ncRNA 3'-end processing","type":"broad"},{"name":"small regulatory ncRNA 3'-end processing","type":"narrow"}],"termid":"GO:0043628","terms_by_termid":{"GO:0043628":null,"GO:1990431":null,"GO:1990432":null}}


id: MONDO:0014126
data:
  {"annotated_genes":["SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85537],"is_not":false,"summary":null,"term":"MONDO:0014126"}]},"cv_name":"mondo","definition":"Any Perrault syndrome in which the cause of the disease is a mutation in the LARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Perrault syndrome","termid":"MONDO:0017312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004069","MONDO:0005066","MONDO:0005047"],"is_obsolete":false,"name":"Perrault syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3809105","OMIM:615300","MEDGEN:815435","GARD:15943"],"synonyms":[{"name":"LARS2 Perrault syndrome","type":"exact"},{"name":"PRLTS4","type":"related"},{"name":"Perrault syndrome 4","type":"exact"},{"name":"Perrault syndrome caused by mutation in LARS2","type":"exact"},{"name":"Perrault syndrome type 4","type":"exact"}],"termid":"MONDO:0014126","terms_by_termid":{"MONDO:0014126":null},"xrefs":{"Monarch":{"xref_id":"0014126"}}}


id: PBO:0027177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_exchange_at_pericentric_heterochromatin","termid":"PBO:0027177"}


id: PBO:0036010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_bundle_structure","termid":"PBO:0036010"}


id: PBO:0088708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA N6-threonyl-carbamoyl-adenosine (t6A) Pgp1","termid":"PBO:0088708"}


id: PBO:0045756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin converting enzyme like 1","termid":"PBO:0045756"}


id: PBO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer","termid":"PBO:0000239"}


id: GO:1990670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi cis cisterna. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"vesicle fusion with Golgi cis cisterna membrane","termid":"GO:1990670"}


id: PATO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's consisting cells.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellularity","termid":"PATO:0001992"}


id: PBO:0112396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, alternative splicing factor 45","termid":"PBO:0112396"}


id: GO:0102307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: erythromycin C + S-adenosyl-L-methionine = erythromycin A + H+ + S-adenosyl-L-homocysteine. Also converts erythromycin D into erythromycin B.","definition_xrefs":["EC:2.1.1.254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"erythromycin 3''-o-methyltransferase activity","synonyms":[{"name":"erythromycin C 3''-o-methyltransferase activity","type":"narrow"},{"name":"erythromycin D 3''-o-methyltransferase activity","type":"narrow"}],"termid":"GO:0102307"}


id: GO:0036401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a pyrokinin and transmitting the signal within the cell to induce a change in cell activity. Pyrokinins are a group of insect neuropeptides that share the common C-terminal pentapeptide sequence Phe-X-Pro-Arg-Leu-NH2 (X = S, T, K, A, or G). They play a central role in diverse physiological processes including stimulation of gut motility, production and release of sex pheromones, diapause, and pupariation.","definition_xrefs":["PMID:19186060","PMID:12951076","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"pyrokinin receptor activity","synonyms":[{"name":"PK receptor activity","type":"exact"}],"termid":"GO:0036401"}


id: PBO:0059979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 24","termid":"PBO:0059979"}


id: PBO:0109830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-stranded telomeric binding protein Tcg1","termid":"PBO:0109830"}


id: GO:1901350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cell-cell signaling that is involved in cell-cell junction organization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling involved in cell-cell junction organization (obsolete GO:1901350)","synonyms":[{"name":"cell-cell signaling involved in cell-cell junction assembly and maintenance","type":"exact"},{"name":"cell-cell signaling involved in cell-cell junction biogenesis","type":"related"},{"name":"cell-cell signaling involved in cell-cell junction organisation","type":"exact"},{"name":"cell-cell signaling involved in intercellular junction assembly and maintenance","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction assembly and maintenance","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction biogenesis","type":"related"},{"name":"cell-cell signalling involved in cell-cell junction organisation","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction organization","type":"exact"},{"name":"cell-cell signalling involved in intercellular junction assembly and maintenance","type":"exact"}],"termid":"GO:1901350"}


id: PBO:0045392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP10 antisense RNA 3","termid":"PBO:0045392"}


id: PBO:0062099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 49 pseudogene","termid":"PBO:0062099"}


id: GO:0160178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transport of a dipeptide across a membrane; transport is independent of the movement of any other molecular species.","definition_xrefs":["PMID:38507452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uniporter activity","termid":"GO:0015292"},{"relation_name":"is_a","term_name":"dipeptide transmembrane transporter activity","termid":"GO:0071916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"dipeptide uniporter activity","termid":"GO:0160178"}


id: PBO:0077731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18 pseudogene 3","termid":"PBO:0077731"}


id: PBO:0013769
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EXOC1","termid":"PBO:0013769"}


id: PBO:0028045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_polymerization","termid":"PBO:0028045"}


id: PBO:0064675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 10","termid":"PBO:0064675"}


id: MONDO:0016982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the endothelial cells of the blood vessels. Microscopically, it is characterized by frequently open vascular anastomosing and branching channels. The malignant cells that line the vascular channels are spindle or epithelioid and often display hyperchromatic nuclei. Angiosarcomas most frequently occur in the skin and breast. Patients with long-standing lymphedema are at increased risk of developing angiosarcoma.","definition_xrefs":["NCIT:C3088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"angiosarcoma","secondary_identifiers":["MESH:D006394","DOID:0001816","ONCOTREE:ANGS","Orphanet:263413","ICD9:171.9","MEDGEN:42385","SCTID:403977003","UMLS:C0018923","HP:0200058","MedDRA:10002476","EFO:0003968","GARD:20900","ICDO:9120/3"],"synonyms":[{"name":"angiosarcoma","type":"exact"},{"name":"angiosarcoma (disease)","type":"exact"},{"name":"blood vessel sarcoma","type":"exact"},{"name":"hemangiosarcoma","type":"exact"},{"name":"hemangiosarcoma, malignant","type":"exact"},{"name":"malignant angioendothelioma","type":"exact"},{"name":"malignant hemangioendothelioma","type":"exact"},{"name":"sarcoma of blood vessel","type":"exact"},{"name":"vascular sarcoma","type":"exact"}],"termid":"MONDO:0016982","xrefs":{"Monarch":{"xref_id":"0016982"}}}


id: PBO:0058692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6820","termid":"PBO:0058692"}


id: PBO:0075904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5","termid":"PBO:0075904"}


id: PBO:0072715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin family peptide receptor 2","termid":"PBO:0072715"}


id: PBO:0092039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonate/alpha-ketoglutarate dioxygenase","termid":"PBO:0092039"}


id: MONDO:1011909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder, non-human animal","termid":"MONDO:1011365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal disease, non-human animal","secondary_identifiers":["OMIA:000856"],"termid":"MONDO:1011909","xrefs":{"Monarch":{"xref_id":"1011909"}}}


id: PBO:0052717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 9","termid":"PBO:0052717"}


id: GO:0004222
data:
  {"annotated_genes":["SJAG_00406","SJAG_02397","SJAG_01179","SJAG_04514","SJAG_02809","SJAG_03393","SJAG_01321","SJAG_01838","SJAG_01004","SJAG_04533","SJAG_04641","SJAG_01816","SJAG_01430","SJAG_03396","SJAG_03648","SJAG_00730"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89079,89761,91818,96833,96843,97818,100539,100580,101700,105054,107540,108656,110448,112634,116099,118173],"is_not":false,"summary":null,"term":"GO:0004222"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"metallopeptidase activity","termid":"GO:0008237"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00406":null,"SJAG_00730":null,"SJAG_01004":null,"SJAG_01179":null,"SJAG_01321":null,"SJAG_01430":null,"SJAG_01816":null,"SJAG_01838":null,"SJAG_02397":null,"SJAG_02809":null,"SJAG_03393":null,"SJAG_03396":null,"SJAG_03648":null,"SJAG_04514":null,"SJAG_04533":null,"SJAG_04641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008233","GO:0016787","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"metalloendopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2485111","Reactome:R-HSA-2533965","Reactome:R-HSA-3791155","Reactome:R-HSA-2168046","Reactome:R-HSA-194808","Reactome:R-HSA-3371385","Reactome:R-HSA-381518","Reactome:R-HSA-194818","Reactome:R-HSA-2002440","Reactome:R-HSA-2473584","Reactome:R-HSA-5333671","Reactome:R-HSA-8949659","Reactome:R-HSA-8874201","Reactome:R-HSA-4224014","Reactome:R-HSA-8940641","Reactome:R-HSA-2002428","Reactome:R-HSA-2514790","Reactome:R-HSA-2533970","Reactome:R-HSA-1655851","Reactome:R-HSA-5250962","Reactome:R-HSA-8874122","Reactome:R-HSA-9624272","Reactome:R-HSA-1564169","Reactome:R-HSA-194793","Reactome:R-HSA-1564117","Reactome:R-HSA-3788075","Reactome:R-HSA-9822532","Reactome:R-HSA-181567","Reactome:R-HSA-2022141","Reactome:R-HSA-8943959","Reactome:R-HSA-177946","Reactome:R-HSA-8874194","Reactome:R-HSA-3791319","Reactome:R-HSA-3827958","Reactome:R-HSA-8874195","Reactome:R-HSA-194800","Reactome:R-HSA-1168777","Reactome:R-HSA-4086205","Reactome:R-HSA-8940959","Reactome:R-HSA-2534248","Reactome:R-HSA-1454822","Reactome:R-HSA-2168982","EC:3.4.24.-","Reactome:R-HSA-2179402","Reactome:R-HSA-381537","Reactome:R-HSA-8949649","Reactome:R-HSA-5250978","Reactome:R-HSA-1474196","Reactome:R-HSA-1592310","Reactome:R-HSA-5250606","Reactome:R-HSA-5362793","Reactome:R-HSA-2473594","Reactome:R-HSA-8940561","Reactome:R-HSA-5250892","Reactome:R-HSA-1474213","Reactome:R-HSA-194809","Reactome:R-HSA-3791149","Reactome:R-HSA-8874192","Reactome:R-HSA-2473596","Reactome:R-HSA-1454757","Reactome:R-HSA-9844241","Reactome:R-HSA-1458433","Reactome:R-HSA-1564184","Reactome:R-HSA-1299476","Reactome:R-HSA-1299478","Reactome:R-HSA-2533874","Reactome:R-HSA-420818","Reactome:R-HSA-5228578","Reactome:R-HSA-5694082","Reactome:R-HSA-6784620","Reactome:R-HSA-1474210","Reactome:R-HSA-8867344","Reactome:R-HSA-2533944","Reactome:R-HSA-8942302","Reactome:R-HSA-8877620","Reactome:R-HSA-9840408","Reactome:R-HSA-3828025","Reactome:R-HSA-1564164","Reactome:R-HSA-264758","Reactome:R-HSA-8949668","Reactome:R-HSA-1564143","Reactome:R-HSA-2534240","Reactome:R-HSA-381435","Reactome:R-HSA-8874187","Reactome:R-HSA-9824402","Reactome:R-HSA-2484882","Reactome:R-HSA-3791295","Reactome:R-HSA-9840564","Reactome:R-HSA-1564179","Reactome:R-HSA-8876868","Reactome:R-HSA-2485148","Reactome:R-HSA-2514831","Reactome:R-HSA-8940554","Reactome:R-HSA-9840532","Reactome:R-HSA-194796","Reactome:R-HSA-2537499","Reactome:R-HSA-2533950","Reactome:R-HSA-1251992","Reactome:R-HSA-1564142","Reactome:R-HSA-1564112","Reactome:R-HSA-1564120"],"synonyms":[{"name":"metalloendoprotease activity","type":"narrow"},{"name":"metalloendoproteinase activity","type":"narrow"}],"termid":"GO:0004222","terms_by_termid":{"GO:0004222":null}}


id: FYPO:0003881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial DNA measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular mtDNA level","termid":"FYPO:0003769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mtDNA absent from cell","synonyms":[{"name":"absent mtDNA","type":"exact"},{"name":"mitochondrial DNA absent from cell","type":"exact"},{"name":"mtDNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mtDNA absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003881"}


id: GO:0006486
data:
  {"annotated_genes":["SJAG_04952","SJAG_00334","SJAG_04363","SJAG_03082","SJAG_00598","SJAG_02102","SJAG_05219","SJAG_00437","SJAG_02648","SJAG_03311","SJAG_04821","SJAG_00183","SJAG_03656","SJAG_00831","SJAG_03032","SJAG_00554","SJAG_01595","SJAG_03330","SJAG_01264","SJAG_01021","SJAG_03790","SJAG_00747","SJAG_01389","SJAG_03056","SJAG_00394","SJAG_03333","SJAG_05348","SJAG_02163","SJAG_03150","SJAG_04401","SJAG_04906","SJAG_04316","SJAG_02783","SJAG_04090","SJAG_02903","SJAG_03555","SJAG_01972","SJAG_01069","SJAG_03188","SJAG_04770","SJAG_04095","SJAG_03149","SJAG_04231","SJAG_04728","SJAG_03774","SJAG_01276","SJAG_00924","SJAG_01950","SJAG_02519","SJAG_01006","SJAG_02996","SJAG_02056","SJAG_04954","SJAG_00816","SJAG_04127","SJAG_01491","SJAG_03764","SJAG_03676","SJAG_04053","SJAG_03871","SJAG_04571"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63186,95211,95926,97279,99521,103260,105233,107480,107850,113204,113398,115528,117264],"is_not":false,"summary":null,"term":"GO:0006486"},{"annotations":[89886,97847,101788,97897,99486,61218,112000,116182,110536,99283,93400,104471,103056,98185,90636,108749],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[92658,105431,100834,87023,98275,99144,110163,88717,92656,98273,62702,92657,98424,110358,98276,102273,104535,98266,98274,102205,108478,110157,112142,92655,100256,103993,117484,117812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006487"},{"annotations":[102057,92660,98256,98280,92662,98258,99823,97386,92661,92659,98259,104420,108750,116289,98257,94827,98279,87024,117485,98278,100843,98277,99487,110537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018279"},{"annotations":[103566,102206,110158,117486,117813,98267,103994,110164,100257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006493"},{"annotations":[92540,101032,105432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"is_a","term_name":"macromolecule glycosylation","termid":"GO:0043413"},{"relation_name":"part_of","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein glycosylation","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0065006"],"synonyms":[{"name":"protein amino acid glycosylation","type":"exact"},{"name":"protein-carbohydrate complex assembly","type":"related"}],"termid":"GO:0006486","terms_by_termid":{"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0018279":null,"GO:0035269":null}}


id: PATO:0000109
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000109 water sensitivity (obsolete PATO:0000109)","termid":"PATO:0000109"}


id: PBO:0081040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 18","termid":"PBO:0081040"}


id: PBO:0024821
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GEN1","termid":"PBO:0024821"}


id: PBO:0041797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 6","termid":"PBO:0041797"}


id: MONDO:0008623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Undritz anomaly","secondary_identifiers":["MESH:C566014","MEDGEN:348657","OMIM:191500","UMLS:C1860604"],"synonyms":[{"name":"Undritz anomaly","type":"exact"},{"name":"hypersegmentation of nuclei of polymorphonuclear leukocytes","type":"related"}],"termid":"MONDO:0008623","xrefs":{"Monarch":{"xref_id":"0008623"}}}


id: GO:0045792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces cell size.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell size","termid":"GO:0008361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell size","synonyms":[{"name":"down regulation of cell size","type":"exact"},{"name":"down-regulation of cell size","type":"exact"},{"name":"downregulation of cell size","type":"exact"},{"name":"inhibition of cell size","type":"narrow"}],"termid":"GO:0045792"}


id: GO:0003316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an myocardial progenitor cell that contributes to the formation of the heart rudiment.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"},{"relation_name":"part_of","term_name":"heart rudiment formation","termid":"GO:0003315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of myocardial progenitor cell apical/basal polarity","synonyms":[{"name":"myocardial progenitor epithelial polarization","type":"exact"}],"termid":"GO:0003316"}


id: PBO:0052875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 7-1","termid":"PBO:0052875"}


id: GO:0032768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of a monooxygenase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of monooxygenase activity (obsolete GO:0032768)","termid":"GO:0032768"}


id: FYPO:0004651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a secondary septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased septum thickness","termid":"FYPO:0006900"},{"relation_name":"output_of","term_name":"abnormal secondary cell septum biogenesis","termid":"FYPO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased secondary cell septum thickness","synonyms":[{"name":"decreased secondary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased secondary cell septum thickness during vegetative growth","type":"exact"},{"name":"decreased secondary septum thickness","type":"exact"},{"name":"reduced secondary cell septum thickness","type":"exact"},{"name":"thin secondary septum","type":"exact"}],"termid":"FYPO:0004651"}


id: PBO:0004755
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equivalent function in S. cerevisiae is performed by STE12, but this is STE-like not HMG","termid":"PBO:0004755"}


id: PBO:0108625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosome assembly protein Rsm2202, fusion protein","termid":"PBO:0108625"}


id: PBO:0059682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 48","termid":"PBO:0059682"}


id: PBO:0086728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene; YPL216W has a paralog, ITC1, that arose from the whole genome duplication","termid":"PBO:0086728"}


id: GO:0160056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a macropinosome.","definition_xrefs":["PMID:19690049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"macropinosome","termid":"GO:0044354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005768","GO:0031410"],"is_obsolete":false,"name":"macropinosome membrane","termid":"GO:0160056"}


id: PBO:0055040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2455","termid":"PBO:0055040"}


id: MONDO:0017241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disorder that presents with spastic paraplegia and intellectual disability in which the cause of the disease is a mutation in the AP4B1 gene.","definition_xrefs":["PMID:29193663","PMID:30543385","PMID:321171285","PMID:29430868"],"gene_count":0,"genotype_count":0,"name":"obsolete AP4-related intellectual disability and spastic paraplegia (obsolete MONDO:0017241)","secondary_identifiers":["Orphanet:280763"],"synonyms":[{"name":"AP4 deficiency syndrome","type":"exact"},{"name":"AP4 related intellectual disability and spastic paraplegia","type":"exact"},{"name":"severe intellectual disability and progressive spastic paraplegia","type":"narrow"}],"termid":"MONDO:0017241","xrefs":{"Monarch":{"xref_id":"0017241"}}}


id: PBO:0075287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 29","termid":"PBO:0075287"}


id: MONDO:0010479
data:
  {"annotated_genes":["SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84774],"is_not":false,"summary":null,"term":"MONDO:0010479"}]},"cv_name":"mondo","definition":"X-linked Charcot-Marie-Tooth disease type 6 is a rare, genetic, principally axonal, peripheral sensorimotor neuropathy characterized by an X-linked dominant inheritance pattern and the childhood-onset of slowly progressive, moderate to severe, distal muscle weakness and atrophy of the lower extremities, as well as distal, panmodal sensory abnormalities, bilateral foot deformities (pes cavus, clawed toes), absent ankle reflexes and gait abnormalities (steppage gait). Females are usually asymptomatic or only present mild manifestations (mild postural hand tremor, mild wasting of hand intrinsic muscles).","definition_xrefs":["Orphanet:352675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type X","termid":"MONDO:0018994"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01402":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease X-linked dominant 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:300905","SCTID:763347000","UMLS:C3806702","DOID:0110207","GARD:12445","MEDGEN:813032"],"synonyms":[{"name":"CMT6X","type":"related"},{"name":"CMTX6","type":"exact"},{"name":"Charcot-Marie-Tooth disease X-linked dominant type 6","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked dominant, 6","type":"related"},{"name":"Charcot-Marie-Tooth disease, X-linked dominant, 6, X-linked dominant","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked dominant, type 6","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy X-linked dominant 6","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, X-linked dominant, 6","type":"related"},{"name":"X-linked Charcot-Marie-Tooth disease type 6","type":"exact"}],"termid":"MONDO:0010479","terms_by_termid":{"MONDO:0010479":null},"xrefs":{"Monarch":{"xref_id":"0010479"}}}


id: MONDO:0005804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally high level of prolactin in the blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpituitarism","termid":"MONDO:0006793"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperprolactinemia","secondary_identifiers":["EFO:0007319","MEDGEN:5698","HP:0000870","NANDO:2100115","MESH:D006966","ICD10CM:E22.1","UMLS:C0020514","SCTID:237662005","ICD9:253.1","NANDO:2200322"],"synonyms":[{"name":"hyperprolactinaemia","type":"exact"},{"name":"hyperprolactinemia","type":"exact"},{"name":"hyperprolactinemia (disease)","type":"exact"},{"name":"hyperprolactinemias","type":"related"},{"name":"hypersecretion syndrome, prolactin","type":"related"},{"name":"inappropriate prolactin secretion","type":"related"},{"name":"inappropriate prolactin secretion syndrome","type":"related"},{"name":"inappropriate secretion prolactin","type":"related"},{"name":"prolactin hypersecretion syndrome","type":"related"},{"name":"prolactin secretion, inappropriate","type":"related"},{"name":"prolactin, inappropriate secretion","type":"related"},{"name":"secretion prolactin, inappropriate","type":"related"},{"name":"secretion, inappropriate prolactin","type":"related"},{"name":"syndrome, prolactin hypersecretion","type":"related"}],"termid":"MONDO:0005804","xrefs":{"Monarch":{"xref_id":"0005804"}}}


id: GO:0010872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cholesterol esterification. Cholesterol esterification is the lipid modification process in which a sterol ester is formed by the combination of a carboxylic acid (often a fatty acid) and cholesterol. In the blood this process is associated with the conversion of free cholesterol into cholesteryl ester, which is then sequestered into the core of a lipoprotein particle.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cholesterol esterification (obsolete GO:0010872)","termid":"GO:0010872"}


id: GO:2000054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000054)","synonyms":[{"name":"negative regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000054"}


id: PBO:0063588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 3","termid":"PBO:0063588"}


id: MONDO:0009022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality characterized by the complete absence of the corpus callosum. It may be an isolated abnormality or associated with other central nervous system abnormalities or syndromes. Clinical manifestations vary. In cases of isolated corpus callosum agenesis, symptoms may be absent or minimal. In cases that are associated with other central nervous system abnormalities or syndromes, symptoms include developmental delays, motor coordination difficulties, and vision impairment.","definition_xrefs":["NCIT:C98905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"corpus callosum, agenesis of","secondary_identifiers":["MEDGEN:104498","MESH:D061085","SCTID:5102002","UMLS:C0175754","OMIM:217990"],"synonyms":[{"name":"ACC","type":"related"},{"name":"agenesis of corpus callosum","type":"exact"},{"name":"agenesis of the corpus callosum","type":"related"},{"name":"corpus callosum agenesis","type":"exact"},{"name":"corpus callosum, agenesis of","type":"exact"},{"name":"isolated corpus callosum agenesis","type":"related"}],"termid":"MONDO:0009022","xrefs":{"Monarch":{"xref_id":"0009022"}}}


id: PBO:0029602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transporter_activity","termid":"PBO:0029602"}


id: PBO:0042066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 136","termid":"PBO:0042066"}


id: PBO:0068595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 46, pseudogene","termid":"PBO:0068595"}


id: PBO:0025416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, possibly truncated by rearrangement and LTR","termid":"PBO:0025416"}


id: MONDO:0011945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal Gaucher disease is the perinatal lethal form of Gaucher disease (GD).","definition_xrefs":["Orphanet:85212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Gaucher disease","termid":"MONDO:0018150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002525","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"Gaucher disease perinatal lethal","secondary_identifiers":["UMLS:C1842704","MEDGEN:374996","OMIM:608013","GARD:10675","MESH:C564306","SCTID:870313002","DOID:0110960"],"synonyms":[{"name":"Gaucher disease collodion type","type":"exact"},{"name":"Gaucher disease perinatal lethal","type":"exact"},{"name":"Gaucher disease, collodion type","type":"exact"},{"name":"Gaucher disease, perinatal lethal","type":"exact"},{"name":"Gaucher disease, perinatal-lethal form","type":"exact"},{"name":"Gaucher's disease perinatal lethal","type":"exact"},{"name":"fetal Gaucher disease","type":"exact"},{"name":"foetal Gaucher disease","type":"exact"},{"name":"perinatal lethal Gaucher disease","type":"exact"}],"termid":"MONDO:0011945","xrefs":{"Monarch":{"xref_id":"0011945"}}}


id: PBO:0083418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the ribosomal gene RPL7B","termid":"PBO:0083418"}


id: PR:Q10136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ste7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ste7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23E2.03c","synonyms":[{"name":"Spom972h-ste7","type":"exact"}],"termid":"PR:Q10136"}


id: _global:has_component_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"w 'has process component' p if p and w are processes,  w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component","termid":"_global:has_component"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_process","secondary_identifiers":["RO:0002018"],"termid":"_global:has_component_process"}


id: GO:0032274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a gonadotropin, any hormone that stimulates the gonads, especially follicle-stimulating hormone and luteinizing hormone.","definition_xrefs":["ISBN:0721662544","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"gonadotropin secretion","synonyms":[{"name":"gonadotrophin secretion","type":"exact"}],"termid":"GO:0032274"}


id: PBO:0062727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 1 pseudogene","termid":"PBO:0062727"}


id: PBO:0034760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase regulatory subunit Dpm2 (predicted)","termid":"PBO:0034760"}


id: PBO:0048789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i2","termid":"PBO:0048789"}


id: PBO:0071381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 4","termid":"PBO:0071381"}


id: PBO:0043979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock domain containing C2","termid":"PBO:0043979"}


id: MONDO:0013886
data:
  {"annotated_genes":["SJAG_02196"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85699],"is_not":false,"summary":null,"term":"MONDO:0013886"}]},"cv_name":"mondo","definition":"Non-progressive cerebellar ataxia with intellectual deficit is a rare subtype of autosomal dominant cerebellar ataxia type 1 (ADCA type 1) characterized by the onset in infancy of cerebellar ataxia, neonatal hypotonia (in some), mild developmental delay and, in later life, intellectual disability. Less common features include dysarthria, dysmetria and dysmorphic facial features (long face, bulbous nose long philtrum, thick lower lip and pointed chin).","definition_xrefs":["Orphanet:314647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"cerebellar dysfunction with variable cognitive and behavioral abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553661","MEDGEN:766575","SCTID:723441001","OMIM:614756","DOID:0050998","GARD:17429"],"synonyms":[{"name":"CAMTA1-related disorder","type":"exact"},{"name":"CANPMR","type":"exact"},{"name":"cerebellar ataxia, nonprogressive, with intellectual disability","type":"exact"},{"name":"cerebellar ataxia, nonprogressive, with mental retardation","type":"exact"},{"name":"cerebellar dysfunction with variable cognitive and behavioral abnormalities","type":"exact"},{"name":"non-progressive cerebellar ataxia with intellectual disability","type":"exact"},{"name":"nonprogressive cerebellar ataxia with intellectual disability","type":"exact"},{"name":"nonprogressive cerebellar ataxia with mental retardation","type":"exact"}],"termid":"MONDO:0013886","terms_by_termid":{"MONDO:0013886":null},"xrefs":{"Monarch":{"xref_id":"0013886"}}}


id: GO:0050886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that involves the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocrine process","synonyms":[{"name":"endocrine physiological process","type":"exact"},{"name":"endocrine physiology","type":"exact"}],"termid":"GO:0050886"}


id: FYPO:0000530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the mitotic cell cycle arrest that normally occurs in response to pheromone is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal response to pheromone","termid":"FYPO:0000302"},{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"abnormal pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"pheromone-induced cell cycle arrest: abnormal","type":"related"}],"termid":"FYPO:0000530"}


id: PBO:0053139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6A","termid":"PBO:0053139"}


id: FYPO:0005477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"normal protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"normal protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005477"}


id: PBO:0060537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase domain containing 1","termid":"PBO:0060537"}


id: GO:0071846
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90386],"is_not":false,"summary":null,"term":"GO:0071846"}]},"cv_name":"biological_process","definition":"An actin filament severing process that results in the removal of actin filament branches specifically at the branch points.","definition_xrefs":["PMID:20362448","GOC:jh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin filament debranching","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071846","terms_by_termid":{"GO:0071846":null}}


id: FYPO:0006989
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118598,118599],"is_not":false,"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[118591],"is_not":false,"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 is normal (i.e. indistinguishable from wild type) at transposable elements.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"normal histone H3-K9 dimethylation at transposable element during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal histone H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at transposable element during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 dimethylation at transposon during vegetative growth","type":"exact"},{"name":"normal histone H3K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"normal histone H3K9me2 at transposable element during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"}],"termid":"FYPO:0006989","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: GO:0003985
data:
  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105995],"is_not":false,"summary":null,"term":"GO:0003985"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 acetyl-CoA = CoA + acetoacetyl-CoA.","definition_xrefs":["RHEA:21036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA C-acyltransferase activity","termid":"GO:0003988"},{"relation_name":"is_a","term_name":"C-acetyltransferase activity","termid":"GO:0016453"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"acetyl-CoA C-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-74181","Reactome:R-HSA-9915356","EC:2.3.1.9","Reactome:R-HSA-73916","UM-BBD_reactionID:r0201","MetaCyc:ACETYL-COA-ACETYLTRANSFER-RXN","Reactome:R-HSA-70844","Reactome:R-HSA-8848215"],"synonyms":[{"name":"acetoacetyl-CoA thiolase activity","type":"related"},{"name":"acetyl coenzyme A thiolase activity","type":"related"}],"termid":"GO:0003985","terms_by_termid":{"GO:0003985":null}}


id: PBO:0080473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1B pseudogene 4","termid":"PBO:0080473"}


id: PBO:0083172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF PRP8/YHR165C","termid":"PBO:0083172"}


id: GO:1990866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sustained stimulus indicating lowered oxygen tension.","definition_xrefs":["PMID:24055447"],"gene_count":0,"genotype_count":0,"name":"obsolete response to sustained hypoxia (obsolete GO:1990866)","termid":"GO:1990866"}


id: GO:0006294
data:
  {"annotated_genes":["SJAG_01207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108440],"is_not":false,"summary":null,"term":"GO:0006294"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins on DNA to form the multiprotein complex involved in damage recognition, DNA helix unwinding, and endonucleolytic cleavage at the site of DNA damage. This assembly occurs before the phosphodiester backbone of the damaged strand is cleaved 3' and 5' of the site of DNA damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006259","GO:0065003","GO:0008150","GO:0006281","GO:0044085"],"is_obsolete":false,"name":"nucleotide-excision repair, preincision complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide-excision repair, preincision complex formation","type":"exact"}],"termid":"GO:0006294","terms_by_termid":{"GO:0006294":null}}


id: MONDO:0700146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm arising from the prostate gland of a dog.","definition_xrefs":["NCIT:C128122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"},{"relation_name":"is_a","term_name":"prostate cancer, dog","termid":"MONDO:1010961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine prostate carcinoma","termid":"MONDO:0700146","xrefs":{"Monarch":{"xref_id":"0700146"}}}


id: PR:Q9UTL8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apl5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTL8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 complex subunit delta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.06","synonyms":[{"name":"Spom972h-apl5","type":"exact"},{"name":"adaptor-related protein complex 3 subunit delta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"delta-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"delta-adaptin 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTL8"}


id: PBO:0058436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5000","termid":"PBO:0058436"}


id: PBO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein (predicted)","termid":"PBO:0005176"}


id: PBO:0052765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 57","termid":"PBO:0052765"}


id: GO:0015150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fucose from one side of a membrane to the other. Fucose is 6-deoxygalactose and has two enantiomers, D-fucose and L-fucose.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"fucose transmembrane transporter activity","termid":"GO:0015150"}


id: PBO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-UBR1 type","termid":"PBO:0002187"}


id: PBO:0063264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 10","termid":"PBO:0063264"}


id: PBO:0054707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2116","termid":"PBO:0054707"}


id: MONDO:0024410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Bifidobacterium.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bifidobacteriales infectious disease","termid":"MONDO:0006706"},{"relation_name":"is_a","term_name":"gram-positive bacterial infections","termid":"MONDO:0021679"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infection caused by Bifidobacterium","secondary_identifiers":["SCTID:721759009","UMLS:C1096283","MEDGEN:923145"],"synonyms":[{"name":"Bifidobacterium caused disease or disorder","type":"exact"},{"name":"Bifidobacterium disease or disorder","type":"exact"},{"name":"Bifidobacterium infection","type":"related"},{"name":"Bifidobacterium infectious disease","type":"exact"},{"name":"infection caused by Bifidobacterium","type":"exact"}],"termid":"MONDO:0024410","xrefs":{"Monarch":{"xref_id":"0024410"}}}


id: PBO:0080351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 3, pseudogene","termid":"PBO:0080351"}


id: GO:0097583
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt1p-Pmt3p.","definition_xrefs":["PMID:12551906","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","termid":"GO:0031502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0032991","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt1p-Pmt3p dimer complex","synonyms":[{"name":"Pmt1p-Pmt3p complex","type":"narrow"}],"termid":"GO:0097583"}


id: PBO:0084727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein of unknown function; associates with mitochondrial ribosome; localizes to the inner membrane with the C terminus facing the intermembrane space; ortholog of human RMND1, mutation in which is implicated in infantile encephaloneuromyopathy and defective mitochondrial translation","termid":"PBO:0084727"}


id: MONDO:0018531
data:
  {"annotated_genes":["SJAG_02049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"}]},"cv_name":"mondo","definition":"A carcinoma that arises from the hepatocytes or intrahepatic bile ducts. The main subtypes are hepatocellular carcinoma (hepatoma) and cholangiocarcinoma.","definition_xrefs":["NCIT:C7927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver cancer","termid":"MONDO:0002691"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02049":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma of liver and intrahepatic biliary tract","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0279000","MEDGEN:78921","GARD:21786","ONCOTREE:HCCIHCH","Orphanet:424936","ICD10CM:C22.1"],"synonyms":[{"name":"cancer of liver","type":"broad"},{"name":"cancer of liver and intrahepatic biliary tract","type":"broad"},{"name":"cancer of the liver","type":"broad"},{"name":"cancer of the liver and intrahepatic biliary tract","type":"broad"},{"name":"carcinoma of liver","type":"broad"},{"name":"carcinoma of liver and IBT","type":"exact"},{"name":"hepatic cancer","type":"broad"},{"name":"hepatocellular carcinoma plus intrahepatic cholangiocarcinoma","type":"related"},{"name":"liver and intrahepatic bile duct cancer","type":"broad"},{"name":"liver and intrahepatic bile duct carcinoma","type":"exact"},{"name":"liver and intrahepatic biliary tract cancer","type":"exact"},{"name":"liver and intrahepatic biliary tract carcinoma","type":"exact"},{"name":"liver cancer","type":"broad"},{"name":"liver carcinoma","type":"broad"},{"name":"liver/hepatobiliary cancer","type":"broad"},{"name":"primary liver carcinoma","type":"exact"}],"termid":"MONDO:0018531","terms_by_termid":{"MONDO:0007256":null},"xrefs":{"Monarch":{"xref_id":"0018531"}}}


id: PBO:0071323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 7","termid":"PBO:0071323"}


id: PBO:0086127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources","termid":"PBO:0086127"}


id: MONDO:0100510
data:
  {"annotated_genes":["SJAG_04369","SJAG_01608","SJAG_03423","SJAG_00084","SJAG_03475","SJAG_03864","SJAG_02016","SJAG_00851","SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010075"},{"annotations":[85664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032724"},{"annotations":[85208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011335"},{"annotations":[86099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010275"},{"annotations":[85612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958006"},{"annotations":[86330,86331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032885"},{"annotations":[84839,84840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019666"}]},"cv_name":"mondo","definition":"An osteochondrodysplasia that results in abnormalities of bone growth in the vertebral column, epiphysis, and metaphysis.","definition_xrefs":["DOID:0080027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00084":null,"SJAG_00183":null,"SJAG_00851":null,"SJAG_01608":null,"SJAG_02016":null,"SJAG_03423":null,"SJAG_03475":null,"SJAG_03864":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0432211","MEDGEN:609408","SCTID:254062008"],"synonyms":[{"name":"SEMD","type":"exact"},{"name":"spondylo-epi-(meta)-physeal dysplasia","type":"exact"}],"termid":"MONDO:0100510","terms_by_termid":{"MONDO:0010075":null,"MONDO:0010275":null,"MONDO:0011335":null,"MONDO:0019666":null,"MONDO:0032724":null,"MONDO:0032885":null,"MONDO:0958006":null},"xrefs":{"Monarch":{"xref_id":"0100510"}}}


id: PBO:0039390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"archaelysin family metallopeptidase 1","termid":"PBO:0039390"}


id: PBO:0072227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 2","termid":"PBO:0072227"}


id: PBO:0000869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase Ggt2","termid":"PBO:0000869"}


id: PR:O59747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase fusion 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.12c","synonyms":[{"name":"Spom972h-pdf1","type":"exact"}],"termid":"PR:O59747"}


id: PBO:0034087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ectoparasite_of","termid":"PBO:0034087"}


id: PBO:0084250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in the de novo synthesis of GTP; member of a four-gene family in S. cerevisiae, constitutively expressed; IMD4 has a paralog, IMD3, that arose from the whole genome duplication","termid":"PBO:0084250"}


id: MONDO:0024390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete actinomycotic infectious disease (obsolete MONDO:0024390)","termid":"MONDO:0024390","xrefs":{"Monarch":{"xref_id":"0024390"}}}


id: GO:0042914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a colicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Colicins are a group of antibiotics produced by E. coli and related species that are encoded by a group of naturally occurring plasmids, e.g. Col E1.","definition_xrefs":["GOC:jl","PMID:17347522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteriocin transport","termid":"GO:0043213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"colicin transport","termid":"GO:0042914"}


id: PBO:0084017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoprotein subunit of transmembrane ring of nuclear pore complex; contributes to nucleocytoplasmic transport, nuclear pore complex (NPC) biogenesis and spindle pole body duplication; type II transmembrane protein composed of N-terminal cytosolic and C-terminal nuclear envelope lumenal domains; homologous to human NUP210","termid":"PBO:0084017"}


id: PBO:0074334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAL1 antisense RNA 1","termid":"PBO:0074334"}


id: MONDO:0019813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital tricuspid stenosis","secondary_identifiers":["NANDO:1200962","UMLS:C0265836","icd11.foundation:1996822362","SCTID:36233006","MedDRA:10010656","Orphanet:95459","ICD10CM:Q22.4","GARD:19262","MEDGEN:539527"],"termid":"MONDO:0019813","xrefs":{"Monarch":{"xref_id":"0019813"}}}


id: GO:0038098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Binding to a bone morphogenetic protein (BMP) in the extracellular region, and inhibiting BMP signaling by preventing BMP from binding to its cell surface receptor.","definition_xrefs":["GOC:bf","GOC:signaling","PMID:19855014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of BMP signaling pathway","termid":"GO:0030514"},{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sequestering of BMP from receptor via BMP binding","synonyms":[{"name":"extracellular sequestering of BMP","type":"broad"},{"name":"extracellular sequestering of bone morphogenetic protein","type":"broad"}],"termid":"GO:0038098"}


id: PBO:0074715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 75B","termid":"PBO:0074715"}


id: PBO:0052278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5D pseudogene 1","termid":"PBO:0052278"}


id: PBO:0067757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 56","termid":"PBO:0067757"}


id: GO:1902244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cis-abienol.","definition_xrefs":["GOC:TermGenie","PMID:22672125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cis-abienol metabolic process","synonyms":[{"name":"cis-abienol metabolism","type":"exact"}],"termid":"GO:1902244"}


id: GO:2001244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic signaling pathway","termid":"GO:2001235"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway","secondary_identifiers":["Reactome:R-HSA-111453"],"synonyms":[{"name":"positive regulation of intrinsic apoptosis","type":"narrow"},{"name":"positive regulation of intrinsic apoptotic pathway","type":"exact"},{"name":"positive regulation of intrinsic apoptotic signalling pathway","type":"exact"},{"name":"positive regulation of mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:2001244"}


id: PBO:0077099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8 homolog B","termid":"PBO:0077099"}


id: FYPO:0000886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000886"}


id: MONDO:0003012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A high grade carcinoma of the kidney. It is not a distinct clinicopathological entity and includes a diverse group of renal cell carcinomas which have been transformed from a lower to a higher grade.","definition_xrefs":["NCIT:C27893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"},{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"sarcomatoid renal cell carcinoma","secondary_identifiers":["UMLS:C1266043","DOID:4473","MEDGEN:220411","ICDO:8318/3","ONCOTREE:SRCC"],"synonyms":[{"name":"RCC w/ sarcomatoid features","type":"exact"},{"name":"SRCC","type":"related"},{"name":"renal cell carcinoma with sarcomatoid features","type":"exact"},{"name":"renal cell carcinoma, spindle cell","type":"exact"},{"name":"sarcomatoid renal cell cancer","type":"exact"},{"name":"sarcomatoid renal cell carcinoma","type":"exact"}],"termid":"MONDO:0003012","xrefs":{"Monarch":{"xref_id":"0003012"}}}


id: PBO:0047557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF12 antisense RNA 2","termid":"PBO:0047557"}


id: PBO:0039594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anosmin 1","termid":"PBO:0039594"}


id: GO:0032840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a proline-rich region within the same polypeptide.","definition_xrefs":["GOC:pf"],"gene_count":0,"genotype_count":0,"name":"obsolete intramolecular proline-rich ligand binding (obsolete GO:0032840)","synonyms":[{"name":"intramolecular proline-rich region binding","type":"exact"}],"termid":"GO:0032840"}


id: MONDO:1010359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Night blindness that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"night blindness, non-human animal","secondary_identifiers":["OMIA:002580"],"termid":"MONDO:1010359","xrefs":{"Monarch":{"xref_id":"1010359"}}}


id: FYPO:0001017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO","termid":"FYPO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005568"],"is_obsolete":false,"name":"premature NETO","synonyms":[{"name":"advanced NETO","type":"exact"},{"name":"early NETO","type":"exact"},{"name":"premature NETO during mitotic cell cycle","type":"related"},{"name":"premature NETO during vegetative growth","type":"exact"},{"name":"premature activation of bipolar cell growth","type":"related"},{"name":"premature cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"premature new end take-off","type":"exact"},{"name":"premature switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0001017"}


id: GO:0016977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of beta-1,4-linkages between N-acetyl-D-glucosamine and D-glucosamine residues in a partly acetylated chitosan.","definition_xrefs":["EC:3.2.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"chitosanase activity","secondary_identifiers":["MetaCyc:3.2.1.132-RXN"],"synonyms":[{"name":"chitosan N-acetylglucosaminohydrolase activity","type":"related"}],"termid":"GO:0016977"}


id: PBO:0076261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small VCP interacting protein","termid":"PBO:0076261"}


id: PBO:0081036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 12D","termid":"PBO:0081036"}


id: MONDO:0021907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aplasia cutis with autosomal recessive inheritance.","definition_xrefs":["PMID:3906608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aplasia cutis congenita","termid":"MONDO:0007145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"aplasia cutis autosomal recessive","secondary_identifiers":["GARD:749"],"termid":"MONDO:0021907","xrefs":{"Monarch":{"xref_id":"0021907"}}}


id: PBO:0011972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Rad22 (previously Rad52)","termid":"PBO:0011972"}


id: PBO:0045378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 3","termid":"PBO:0045378"}


id: FYPO:0009068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ciclopirox olamine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to ciclopirox olamine","synonyms":[{"name":"resistance to ciclopirox olamine during mitotic cell cycle","type":"related"},{"name":"resistance to ciclopirox olamine during vegetative growth","type":"exact"},{"name":"resistant to ciclopirox olamine","type":"exact"}],"termid":"FYPO:0009068"}


id: MONDO:0012959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 11, susceptibility to","secondary_identifiers":["OMIM:612599","UMLS:C2675475","DOID:0111285","MEDGEN:382613"],"synonyms":[{"name":"PSORS11","type":"exact"},{"name":"psoriasis 11, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 11","type":"exact"}],"termid":"MONDO:0012959","xrefs":{"Monarch":{"xref_id":"0012959"}}}


id: PBO:0061478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NREP antisense RNA 1","termid":"PBO:0061478"}


id: MONDO:0009733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome within the first three motnhs of life, characterized initially by increased mesangial matrix, with or without hypertrophy and hyperplasia of podocytes, and eventual glomerular sclerosis.","definition_xrefs":["NCIT:C121198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 4","secondary_identifiers":["GARD:15210","UMLS:C3151568","DOID:0080383","OMIM:256370","MEDGEN:462918"],"synonyms":[{"name":"DMS","type":"related"},{"name":"NPHS4","type":"related"},{"name":"WT1 nephrotic syndrome","type":"exact"},{"name":"congenital nephrotic syndrome - diffuse mesangial sclerosis","type":"exact"},{"name":"diffuse isolated mesangial sclerosis","type":"related"},{"name":"diffuse mesangial sclerosis","type":"related"},{"name":"familial mesangial sclerosis","type":"related"},{"name":"isolated diffuse mesangial sclerosis","type":"related"},{"name":"mesangial sclerosis, diffuse","type":"related"},{"name":"nephrotic syndrome caused by mutation in WT1","type":"exact"},{"name":"nephrotic syndrome, early onset with diffuse mesangial sclerosis","type":"related"},{"name":"nephrotic syndrome, type 4","type":"exact"}],"termid":"MONDO:0009733","xrefs":{"Monarch":{"xref_id":"0009733"}}}


id: FYPO:0009065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased resistance to a combination of X-rays and ramapycin.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"},{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to X-rays and rapamycin during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth when treated with rapamycin and X-rays","type":"exact"},{"name":"resistant to X-rays and rapamycin during vegetative growth","type":"exact"}],"termid":"FYPO:0009065"}


id: GO:0016719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9,9'-di-cis-zeta-carotene + 2 a quinone = 7,7',9,9'-tetra-cis-lycopene + 2 a quinol.","definition_xrefs":["RHEA:30955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"9,9'-di-cis-zeta-carotene desaturase activity","secondary_identifiers":["MetaCyc:RXN-12242","EC:1.3.5.6"],"synonyms":[{"name":"carotene 7,8-desaturase activity","type":"related"},{"name":"carotene,hydrogen-donor:oxygen oxidoreductase activity","type":"related"},{"name":"zeta-carotene desaturase activity","type":"related"}],"termid":"GO:0016719"}


id: PBO:0070918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 26","termid":"PBO:0070918"}


id: RO:HOM0000063
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves orthologous pairs of interacting molecules in different organisms.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_interology_relationship_with","synonyms":[{"name":"interologous to","type":"exact"}],"termid":"RO:HOM0000063"}


id: PBO:0062499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily D member 4","termid":"PBO:0062499"}


id: GO:1990144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to hypoxia (lowered oxygen tension). Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. The pathway ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:rl","GOC:mtg_apoptosis","GOC:BHF","PMID:20436456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"},{"relation_name":"part_of","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}


id: PBO:0001736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nedd4/Rsp5 family","termid":"PBO:0001736"}


id: FYPO:0006302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which changes in contacts within a chromosome arm that normally take place during mitosis do not occur.","definition_xrefs":["PomBase:mah","PMID:28825727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000337","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"abolished intra-arm chromosome contact change during mitosis","synonyms":[{"name":"abolished changes in intra-arm contacts in mitosis","type":"exact"},{"name":"abolished intra-arm chromosome contact change during M phase of mitotic cell cycle","type":"related"},{"name":"abolished intra-arm chromosome contact change during mitosis during vegetative growth","type":"exact"},{"name":"intra-arm chromosome contact change abolished during mitosis","type":"exact"}],"termid":"FYPO:0006302"}


id: MOD:01314
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(1)H,4x(12)C-labeled N6-succinyl-L-lysine.","definition_xrefs":["PubMed:11857757","PubMed:12716131","Unimod:64#K","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"4x(1)H,4x(12)C-labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent light form (K)","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:01314"}


id: GO:1990721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that is capable of dephosphorylation of alky, aryl and acyl orthophosphate monoesters and phosphorylated proteins. Optimal activity in acidic environment (pH 4-6). In mammals it consists of a homodimer of ACPP.","definition_xrefs":["GOC:bhm","PMID:12525165"],"gene_count":0,"genotype_count":0,"name":"obsolete prostatic acid phosphatase complex (obsolete GO:1990721)","synonyms":[{"name":"ACPP homodimer complex","type":"narrow"},{"name":"PAP complex","type":"exact"},{"name":"prostatic acid phosphatase complex","type":"exact"}],"termid":"GO:1990721"}


id: GO:0004364
data:
  {"annotated_genes":["SJAG_00238","SJAG_05181","SJAG_03863","SJAG_00179"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74266,98777,110044,113312,115564,118178],"is_not":false,"summary":null,"term":"GO:0004364"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.","definition_xrefs":["EC:2.5.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00179":null,"SJAG_00238":null,"SJAG_03863":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"glutathione transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9748996","Reactome:R-HSA-9011595","Reactome:R-HSA-9026901","Reactome:R-HSA-5423653","Reactome:R-HSA-9026780","MetaCyc:GSHTRAN-RXN","Reactome:R-HSA-9026777","Reactome:R-HSA-176054","Reactome:R-HSA-9026911","Reactome:R-HSA-176059","Reactome:R-HSA-9753280","Reactome:R-HSA-3301943"],"synonyms":[{"name":"RX:glutathione R-transferase activity","type":"related"},{"name":"S-(hydroxyalkyl)glutathione lyase activity","type":"related"},{"name":"glutathione S-alkyl transferase activity","type":"related"},{"name":"glutathione S-alkyltransferase activity","type":"related"},{"name":"glutathione S-aralkyltransferase activity","type":"related"},{"name":"glutathione S-aryltransferase activity","type":"related"},{"name":"glutathione S-transferase activity","type":"related"},{"name":"glutathione conjugation reaction","type":"exact"}],"termid":"GO:0004364","terms_by_termid":{"GO:0004364":null}}


id: MONDO:0010542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dilated cardiomyopathy in which the cause of the disease is a mutation in the DMD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of dystrophin","termid":"MONDO:0016147"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 3B","secondary_identifiers":["DOID:0081164","MEDGEN:777148","ICD9:425.4","DOID:0060561","SCTID:702424003","UMLS:C3668940","DOID:0110461","MESH:C580047","GARD:15287","OMIM:302045"],"synonyms":[{"name":"CMD3B","type":"exact"},{"name":"DMD dilated cardiomyopathy","type":"exact"},{"name":"DMD-related dilated cardiomyopathy","type":"related"},{"name":"X-linked dilated cardiomyopathy","type":"related"},{"name":"cardiomyopathy, dilated, 3B","type":"related"},{"name":"cardiomyopathy, dilated, X-linked","type":"related"},{"name":"cardiomyopathy, dilated, type 3B","type":"exact"},{"name":"dilated cardiomyopathy 3B","type":"exact"},{"name":"dilated cardiomyopathy caused by mutation in DMD","type":"exact"},{"name":"dilated cardiomyopathy type 3B","type":"exact"}],"termid":"MONDO:0010542","xrefs":{"Monarch":{"xref_id":"0010542"}}}


id: PBO:0047020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A23","termid":"PBO:0047020"}


id: GO:1901647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synoviocyte proliferation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of synoviocyte proliferation","termid":"GO:1901645"},{"relation_name":"positively_regulates","term_name":"synoviocyte proliferation","termid":"GO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synoviocyte proliferation","synonyms":[{"name":"activation of synoviocyte proliferation","type":"narrow"},{"name":"up regulation of synoviocyte proliferation","type":"exact"},{"name":"up-regulation of synoviocyte proliferation","type":"exact"},{"name":"upregulation of synoviocyte proliferation","type":"exact"}],"termid":"GO:1901647"}


id: PBO:0062970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 13","termid":"PBO:0062970"}


id: PR:O94454
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A COP9 signalosome complex subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00362","PRO:DNx","PANTHER:PTHR10410:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.13c","secondary_identifiers":["UniProtKB:O94454"],"synonyms":[{"name":"Spom972h-COPS5","type":"exact"}],"termid":"PR:O94454"}


id: PBO:0028245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0028245"}


id: PBO:0002900
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.-.-.-","termid":"PBO:0002900"}


id: PBO:0048517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF antisense RNA 1","termid":"PBO:0048517"}


id: GO:0043370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of CD4-positive, alpha-beta T cell differentiation.","definition_xrefs":["ISBN:0781735149","GOC:add","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000514"},{"relation_name":"regulates","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD4-positive, alpha-beta T cell differentiation","synonyms":[{"name":"regulation of CD4-positive T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD4-positive T-cell differentiation","type":"exact"},{"name":"regulation of CD4-positive T-lymphocyte differentiation","type":"exact"},{"name":"regulation of CD4-positive, alpha beta T cell development","type":"related"},{"name":"regulation of CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"regulation of CD4-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD4-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"regulation of CD4-positive, alpha beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043370"}


id: GO:0005559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ribozyme (obsolete GO:0005559)","synonyms":[{"name":"ribozyme","type":"exact"}],"termid":"GO:0005559"}


id: PBO:0080590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 17","termid":"PBO:0080590"}


id: MOD:00275
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-histidine residue and an L-tyrosine residue by a carbon-nitrogen bond to form 3'-(1'-L-histidyl)-L-tyrosine.","definition_xrefs":["PubMed:10338009","ChEBI:19837","RESID:AA0270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(1'-L-histidyl)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-[1-(5-[(2S)-2-amino-2-carboxyethyl]-2-hydroxyphenyl)-1H-imidazol-4-yl]propanoic acid","type":"exact"},{"name":"3'-(1'-L-histidyl)-L-tyrosine","type":"exact"},{"name":"3'-(N(epsilon)-histidyl)tyrosine","type":"exact"},{"name":"3'-(N1'-histidyl)tyrosine","type":"exact"},{"name":"3'-(tau-histidyl)tyrosine","type":"exact"},{"name":"3'-(tele-histidyl)tyrosine","type":"exact"},{"name":"CROSSLNK 1'-histidyl-3'-tyrosine (His-Tyr)","type":"exact"}],"termid":"MOD:00275"}


id: PBO:0035786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0035786"}


id: MONDO:0016462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated agammaglobulinemia (IA) is the non-syndromic form of agammaglobulinemia, a primary immunodeficiency disease, and is characterized by deficient gamma globulins and associated predisposition to frequent and recurrent infections from infancy.","definition_xrefs":["Orphanet:229717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"isolated agammaglobulinemia","secondary_identifiers":["GARD:17155","UMLS:C4707181","MEDGEN:1639972","SCTID:764858009"],"synonyms":[{"name":"isolated hypogammaglobulinemia","type":"exact"},{"name":"nonsyndromic agammaglobulinemia","type":"exact"}],"termid":"MONDO:0016462","xrefs":{"Monarch":{"xref_id":"0016462"}}}


id: PBO:0065787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase catalytic subunit 1","termid":"PBO:0065787"}


id: GO:0071883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an adrenergic receptor binding to its physiological ligand and leading to the activation of a MAP kinase cascade.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"MAPK-activating adrenergic receptor signaling pathway","synonyms":[{"name":"activation of MAP kinase activity by adrenergic receptor signaling pathway","type":"exact"},{"name":"activation of MAP kinase activity by adrenergic receptor signalling pathway","type":"exact"},{"name":"activation of MAPK activity by adrenergic receptor signaling pathway","type":"exact"},{"name":"activation of MAPK activity by adrenergic receptor signalling pathway","type":"exact"}],"termid":"GO:0071883"}


id: PBO:0084914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic spindle midzone-localized microtubule bundling protein; microtubule-associated protein (MAP) family member; required for spindle elongation and stabilization; undergoes cell cycle-regulated degradation by anaphase promoting complex; potential Cdc28p substrate; relative distribution to microtubules decreases upon DNA replication stress","termid":"PBO:0084914"}


id: PBO:0004133
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mei4 DEpendent protein","termid":"PBO:0004133"}


id: MONDO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Term generally used to describe complaints related to refractive error, ocular muscle imbalance, including pain or aching around the eyes, burning and itchiness of the eyelids, ocular fatigue, and headaches.","definition_xrefs":["MESH:D001248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"asthenopia","secondary_identifiers":["MEDGEN:2108","UMLS:C0004095","DOID:10141"],"synonyms":[{"name":"accommodative strain","type":"exact"}],"termid":"MONDO:0000950","xrefs":{"Monarch":{"xref_id":"0000950"}}}


id: GO:0032930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of enzymatic generation of superoxide by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide anion generation","termid":"GO:0032928"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species metabolic process","termid":"GO:2000379"},{"relation_name":"positively_regulates","term_name":"superoxide anion generation","termid":"GO:0042554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of superoxide anion generation","synonyms":[{"name":"activation of superoxide release","type":"narrow"},{"name":"positive regulation of superoxide release","type":"exact"},{"name":"stimulation of superoxide release","type":"narrow"},{"name":"up regulation of superoxide release","type":"exact"},{"name":"up-regulation of superoxide release","type":"exact"},{"name":"upregulation of superoxide release","type":"exact"}],"termid":"GO:0032930"}


id: GO:0046387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyribose 1,5-bisphosphate, the diphosphorylated sugar 1,5-diphospho-2-deoxyribose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose 1,5-bisphosphate metabolic process","synonyms":[{"name":"deoxyribose 1,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:0046387"}


id: PBO:0077521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 236","termid":"PBO:0077521"}


id: PBO:0069803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1089, pseudogene","termid":"PBO:0069803"}


id: GO:0035042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replacement of sperm-specific chromosomal proteins with somatic histones, to allow the paternal genome to acquire a nucleosomal chromatin organization compatible with nuclear activity.","definition_xrefs":["GOC:bf","PMID:11735001"],"gene_count":0,"genotype_count":0,"name":"obsolete fertilization, exchange of chromosomal proteins (obsolete GO:0035042)","synonyms":[{"name":"sperm-specific histone exchange","type":"exact"},{"name":"sperm-specific histone replacement","type":"exact"}],"termid":"GO:0035042"}


id: PBO:0069174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 428, pseudogene","termid":"PBO:0069174"}


id: PBO:0003821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in respiratory chain complex IV assembly Coa1 (predicted)","termid":"PBO:0003821"}


id: GO:0008573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. ATP hydrolysis to import and assemble peroxisome components into the organelle.","definition_xrefs":["EC:3.6.4.7"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome-assembly ATPase activity (obsolete GO:0008573)","synonyms":[{"name":"peroxisome-assembly ATPase activity","type":"exact"}],"termid":"GO:0008573"}


id: PBO:0072511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 40","termid":"PBO:0072511"}


id: GO:0044785
data:
  {"annotated_genes":["SJAG_00666","SJAG_01515","SJAG_01082","SJAG_04259","SJAG_04126","SJAG_00145","SJAG_01837","SJAG_01330","SJAG_03327","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105785,113941],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[116112,101287,105786],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[98197,99629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[101778,99630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[98198],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[113226],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[94660],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[100826],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"},{"relation_name":"is_a","term_name":"metaphase/anaphase transition of cell cycle","termid":"GO:0044784"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic metaphase/anaphase transition","type":"exact"}],"termid":"GO:0044785","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990949":null,"GO:1990950":null}}


id: PBO:0086091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase required for mitotic exit; required for rDNA segregation, cytokinesis, meiosis I spindle disassembly, environmental stress response; held in nucleolus by Cdc55p in early meiosis, liberated by FEAR and Mitotic Exit Network in anaphase, enabling it to effect a decrease in CDK/B-cyclin activity and mitotic exit; sequestered in metaphase II, released upon entry into anaphase II; human homolog CDC14A can complement thermosensitivity of yeast cdc14-1 mutant","termid":"PBO:0086091"}


id: MONDO:0023167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal alopecia congenital megalencephaly","termid":"MONDO:0023167","xrefs":{"Monarch":{"xref_id":"0023167"}}}


id: MONDO:1012744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant cystinuria that occurs in dogs due to a mutation in the SLC3A1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"},{"relation_name":"is_a","term_name":"cystinuria, non-human animal","termid":"MONDO:1012968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant cystinuria, SLC3A1-related, dog","secondary_identifiers":["OMIA:001879-9615"],"synonyms":[{"name":"cystinuria, type II - A, dog","type":"related"}],"termid":"MONDO:1012744","xrefs":{"Monarch":{"xref_id":"1012744"}}}


id: GO:0045676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of R7 differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R7 cell differentiation","termid":"GO:0045676"}


id: MONDO:1011865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axonopathy, non-human animal","secondary_identifiers":["OMIA:001106"],"termid":"MONDO:1011865","xrefs":{"Monarch":{"xref_id":"1011865"}}}


id: PBO:0056742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meteorin like, glial cell differentiation regulator","termid":"PBO:0056742"}


id: MONDO:0018538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited digestive cancer-predisposing syndrome (obsolete MONDO:0018538)","secondary_identifiers":["Orphanet:425003"],"termid":"MONDO:0018538","xrefs":{"Monarch":{"xref_id":"0018538"}}}


id: SO:0000677
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The canonical 5' splice site has the sequence \\\"GT\\\".","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"five_prime_cis_splice_site","termid":"SO:0000163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canonical_five_prime_splice_site","synonyms":[{"name":"canonical 5' splice site","type":"exact"},{"name":"canonical five prime splice site","type":"exact"}],"termid":"SO:0000677"}


id: GO:0039616
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=2 symmetry. The T=2 capsid is composed of 12 pentameric dimers.","definition_xrefs":["VZ:838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=2 icosahedral viral capsid","termid":"GO:0039616"}


id: GO:0039585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with activation and autophosphorylation of PKR (also known as EIF2AK2), which phosphorylates proteins including the translation initiation factor eIF2 to inhibit translation. PKR is activated by stress signals and during the antiviral response, activated by binding to viral double-stranded RNA (dsRNA) leading to inhibition of protein synthesis during viral infection.","definition_xrefs":["PMID:21204021","VZ:1576","PMID:22102852","PMID:27629041","PMID:9843495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"PKR/eIFalpha signaling","secondary_identifiers":["Reactome:R-HSA-9833482"],"synonyms":[{"name":"EIF2AK2 signal transduction","type":"exact"},{"name":"EIF2AK2/PRK signaling","type":"exact"},{"name":"PKR signal transduction","type":"exact"},{"name":"PKR signaling pathway","type":"exact"},{"name":"signaling through PKR","type":"exact"}],"termid":"GO:0039585"}


id: MONDO:0008752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alexander disease (AxD) is a rare neurodegenerative disorder of the astrocytes comprised of two clinical forms: AxD Type I and Type II manifesting with various degrees of macrocephaly, spasticity, ataxia and seizures and leading to psychomotor regression and death.","definition_xrefs":["Orphanet:58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Alexander disease","secondary_identifiers":["NCIT:C84545","NANDO:2200835","DOID:4252","NORD:749","NANDO:1200554","icd11.foundation:2023359698","MEDGEN:78724","UMLS:C0270726","MESH:D038261","OMIM:203450","GARD:5774","SCTID:81854007"],"synonyms":[{"name":"ALXDRD","type":"related"},{"name":"Alexander disease","type":"exact"},{"name":"Alexander's disease","type":"exact"},{"name":"AxD","type":"exact"},{"name":"alexanders leukodystrophy","type":"related"},{"name":"megalencephaly in infancy accompanied by progressive spasticity and dementia","type":"related"}],"termid":"MONDO:0008752","xrefs":{"Monarch":{"xref_id":"0008752"}}}


id: GO:1901426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a furfural stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to furfural","termid":"GO:1901426"}


id: MONDO:0016022
data:
  {"annotated_genes":["SJAG_03657","SJAG_03042","SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012245"},{"annotations":[86730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013322"},{"annotations":[85925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054846"}]},"cv_name":"mondo","definition":"A rare disorder characterized clinically by the onset of fragmentary myoclonus appearing in the first month of life, often associated with erratic focal seizures and a suppression-burst EEG pattern.","definition_xrefs":["Orphanet:1935"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mitochondrial substrate carrier disorder","termid":"MONDO:0016801"},{"relation_name":"is_a","term_name":"neonatal period electroclinical syndrome","termid":"MONDO:0000412"},{"relation_name":"is_a","term_name":"neonatal/infantile epilepsy syndrome","termid":"MONDO:0100022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_03042":null,"SJAG_03657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"early myoclonic encephalopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1877241469","DOID:308","NCIT:C116593","GARD:16581","NANDO:1200594","SCTID:44423001","MEDGEN:124373","UMLS:C0270855"],"synonyms":[{"name":"EME","type":"exact"},{"name":"early myoclonic encephalopathy","type":"exact"},{"name":"early myoclonic encephalopathy with suppression-bursts","type":"exact"},{"name":"epileptic seizures - myoclonic","type":"exact"},{"name":"epileptic seizures, myoclonic","type":"exact"},{"name":"myoclonia epileptica","type":"exact"},{"name":"myoclonic epilepsy","type":"exact"},{"name":"myoclonic seizure","type":"exact"},{"name":"myoclonic seizure disorder","type":"exact"},{"name":"myoclonus epilepsy","type":"related"}],"termid":"MONDO:0016022","terms_by_termid":{"MONDO:0012245":null,"MONDO:0013322":null,"MONDO:0054846":null},"xrefs":{"Monarch":{"xref_id":"0016022"}}}


id: FYPO:0003392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ubiquinone binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ubiquinone binding","termid":"FYPO:0003391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased ubiquinone binding","synonyms":[{"name":"decreased coenzyme Q binding","type":"exact"},{"name":"reduced ubiquinone binding","type":"exact"}],"termid":"FYPO:0003392"}


id: GO:0052639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylic acid + UDP-glucose = salicylic acid glucose ester + UDP.","definition_xrefs":["RHEA:62316","MetaCyc:RXN-11659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"salicylic acid glucosyltransferase (ester-forming) activity","synonyms":[{"name":"UDP:glucose:2-hydroxybenzoic acid glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:SA glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylate glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylic acid glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"salicylic acid glucosyltransferase activity","type":"broad"}],"termid":"GO:0052639"}


id: GO:1901864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving capsorubin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00807","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"capsorubin metabolic process","synonyms":[{"name":"capsorubin metabolism","type":"exact"}],"termid":"GO:1901864"}


id: PR:000060258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe) that lacks phosphorylation on the residue at the position equivalent to Ser-52 of the amino acid sequence represented by UniProtKB:P56286. UniProtKB:P56286, Ser-52, PR:000026291.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:31048492","PMID:28771613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tif211/UnPhos(S52)","pombase_gene_id":"SPAC3G9.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: eukaryotic translation initiation factor 2 subunit alpha unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-EIF2S1/UnPhos:1","type":"exact"},{"name":"Tif211/UnPhos(S52)","type":"exact"},{"name":"UniProtKB:P56286, Ser-52, PR:000026291","type":"narrow"},{"name":"UniProtKB:P56286-1, Ser-52, PR:000026291","type":"narrow"}],"termid":"PR:000060258"}


id: MONDO:0016800
data:
  {"annotated_genes":["SJAG_00547","SJAG_00404","SJAG_01417","SJAG_01890","SJAG_01589"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[85466,85465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014775"},{"annotations":[85217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008922"},{"annotations":[85331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014804"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00547":null,"SJAG_01417":null,"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial membrane transport disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20761","icd11.foundation:1340308055","MEDGEN:1842228","Orphanet:254827","UMLS:C5680718"],"termid":"MONDO:0016800","terms_by_termid":{"MONDO:0008922":null,"MONDO:0012557":null,"MONDO:0014775":null,"MONDO:0014804":null},"xrefs":{"Monarch":{"xref_id":"0016800"}}}


id: GO:0042268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cytolysis","termid":"GO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cytolysis","termid":"GO:0042268"}


id: FYECO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sulfur was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited sulfur","synonyms":[{"name":"limited sulphur added","type":"exact"}],"termid":"FYECO:0000180"}


id: PBO:0058100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4315-2","termid":"PBO:0058100"}


id: PBO:0052703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 4","termid":"PBO:0052703"}


id: MONDO:0021192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm arising from tooth-forming tissues. It occurs in the maxillofacial skeleton or the gingiva. Benign tumors are slow growing and are not associated with specific clinical symptoms. Pain is absent or slight. Malignant tumors are usually associated with rapid swelling and pain.","definition_xrefs":["NCIT:C3286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontogenic neoplasm","secondary_identifiers":["ICDO:9270/1","MEDGEN:10426","MESH:D009808","UMLS:C0028880"],"synonyms":[{"name":"calcareous tooth neoplasm","type":"exact"},{"name":"calcareous tooth neoplasm (disease)","type":"exact"},{"name":"calcareous tooth tumor","type":"exact"},{"name":"calcareous tooth tumour","type":"exact"},{"name":"neoplasm of calcareous tooth","type":"exact"},{"name":"odontogenic neoplasm","type":"exact"},{"name":"odontogenic tumor","type":"exact"},{"name":"odontogenic tumour","type":"exact"},{"name":"tumor of calcareous tooth","type":"exact"},{"name":"tumour of calcareous tooth","type":"exact"}],"termid":"MONDO:0021192","xrefs":{"Monarch":{"xref_id":"0021192"}}}


id: PBO:0026818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_punctate_nuclear_protein_localization","termid":"PBO:0026818"}


id: PBO:0011498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly protein Mzm1","termid":"PBO:0011498"}


id: GO:0098793
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a synapse that is part of the presynaptic cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynapse","synonyms":[{"name":"presynaptic terminal","type":"exact"}],"termid":"GO:0098793"}


id: GO:0061657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of UFM1 from one protein to another via the reaction X-UFM1 + Y = Y-UFM1 + X, where both the X-UFM1 and Y-UFM1 linkages are thioester bonds between the C-terminal amino acid of UFM1 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"},{"relation_name":"is_a","term_name":"UFM1 transferase activity","termid":"GO:0071568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003824","GO:0016746","GO:0019787","GO:0003674"],"is_obsolete":false,"name":"UFM1 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061657"}


id: GO:0098979
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse consisting of a single presynapse and multiple postsynapses. These postsynapses may come from the same cell of from different cells. Polyadic synapses are common in arthropod and nematode central nervous systems.","definition_xrefs":["PMID:26780543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polyadic synapse","termid":"GO:0098979"}


id: PBO:0046114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1 pseudogene 1","termid":"PBO:0046114"}


id: PBO:0059852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 5","termid":"PBO:0059852"}


id: MONDO:1010575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, domestic cat","secondary_identifiers":["OMIA:000279-9685"],"termid":"MONDO:1010575","xrefs":{"Monarch":{"xref_id":"1010575"}}}


id: PBO:0059888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 11","termid":"PBO:0059888"}


id: PR:Q09733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gef2 gene.","definition_xrefs":["UniProtKB:Q09733","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho guanine nucleotide exchange factor gef2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.16","synonyms":[{"name":"Spom972h-gef2","type":"exact"}],"termid":"PR:Q09733"}


id: PBO:0042344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD81 molecule","termid":"PBO:0042344"}


id: FYPO:0001848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which ferric-chelate reductase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal ferric-chelate reductase activity","termid":"FYPO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished ferric-chelate reductase activity","synonyms":[{"name":"ferric-chelate reductase activity abolished","type":"exact"}],"termid":"FYPO:0001848"}


id: PBO:0085216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase for Vac8p; required for vacuolar membrane fusion; contains an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain; autoacylates; required for vacuolar integrity under stress conditions","termid":"PBO:0085216"}


id: MONDO:0024270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections of the INTESTINES with PARASITES, commonly involving PARASITIC WORMS. Infections with roundworms (NEMATODE INFECTIONS) and tapeworms (CESTODE INFECTIONS) are also known as HELMINTHIASIS.","definition_xrefs":["MESH:D007411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"parasitic intestinal disorder","secondary_identifiers":["UMLS:C0021832","MEDGEN:7131","EFO:0009561"],"synonyms":[{"name":"disease, parasitic intestinal","type":"related"},{"name":"diseases, parasitic intestinal","type":"related"},{"name":"intestinal disease, parasitic","type":"related"},{"name":"intestine parasitic infection","type":"exact"},{"name":"parasitic intestinal disease","type":"exact"},{"name":"parasitic intestinal diseases","type":"related"}],"termid":"MONDO:0024270","xrefs":{"Monarch":{"xref_id":"0024270"}}}


id: GO:0106391
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for the splicing of intron 4 of the cytochrome b (COB) gene. In S. cerevisiae, the complex contains the maturase bI4 (which derives from one of the products of the splicing), Leucyl-tRNA synthetase NAM2 and the intron 4 of the cytochrome b pre-mRNA. The two proteins stimulate the ribozyme activity of the pre-mRNA which autoctalyse a group I intron splicing.","definition_xrefs":["GOC:lnp","PMID:19622748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"bI4 intron splicing complex","secondary_identifiers":["Intact:EBI-16420264"],"termid":"GO:0106391"}


id: PBO:0109294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in head and neck cancer 2","termid":"PBO:0109294"}


id: PBO:0018270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrs1","termid":"PBO:0018270"}


id: MONDO:0013793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalomyopathy, mitochondrial, due to voltage-dependent anion channel deficiency","secondary_identifiers":["MEDGEN:482736","OMIM:614520","UMLS:C3281106"],"synonyms":[{"name":"encephalomyopathy, mitochondrial, due to voltage-dependent anion channel deficiency","type":"exact"}],"termid":"MONDO:0013793","xrefs":{"Monarch":{"xref_id":"0013793"}}}


id: GO:1905961
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of protein-cysteine S-palmitoyltransferase activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","GOC:TermGenie","PMID:20851885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase complex","termid":"GO:0002178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein-cysteine S-palmitoyltransferase complex","synonyms":[{"name":"Palmitoyltransferase ERF2-SHR5 complex","type":"narrow"},{"name":"Palmitoyltransferase ERF2/SHR5 complex","type":"narrow"}],"termid":"GO:1905961"}


id: PBO:0068091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 397","termid":"PBO:0068091"}


id: PBO:0046768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 8","termid":"PBO:0046768"}


id: PBO:0002759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor, Elf1 family (predicted)","termid":"PBO:0002759"}


id: GO:0046126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleoside biosynthetic process","termid":"GO:0046120"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside biosynthetic process","termid":"GO:0046134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside biosynthetic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleoside formation","type":"exact"},{"name":"pyrimidine deoxyribonucleoside synthesis","type":"exact"}],"termid":"GO:0046126"}


id: GO:0020015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle found in organisms from the order Kinetoplastida that houses the enzymes of glycolysis.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005737","GO:0005777","GO:0005575"],"is_obsolete":false,"name":"glycosome","secondary_identifiers":["Wikipedia:Glycosome"],"termid":"GO:0020015"}


id: MONDO:1010752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrichosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis, non-human animal","termid":"MONDO:1010130"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrichosis, dog","secondary_identifiers":["OMIA:000513-9615"],"termid":"MONDO:1010752","xrefs":{"Monarch":{"xref_id":"1010752"}}}


id: PR:O94694
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0620 protein C83.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.10","synonyms":[{"name":"Spom972h-SPBC83.10","type":"exact"}],"termid":"PR:O94694"}


id: MONDO:0010589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aarskog-Scott syndrome (AAS) is a rare developmental disorder characterized by facial, limbs and genital features, and a disproportionate acromelic short stature.","definition_xrefs":["Orphanet:915"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"FG syndrome","termid":"MONDO:0002010"},{"relation_name":"is_a","term_name":"faciodigitogenital syndrome","termid":"MONDO:0021005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aarskog-Scott syndrome, X-linked","secondary_identifiers":["MedDRA:10067148","NCIT:C129720","MESH:C535331","OMIM:305400","DOID:6683","MEDGEN:61234","SCTID:14921002","UMLS:C0175701","ICD9:759.89"],"synonyms":[{"name":"AAS","type":"broad"},{"name":"Aarskog Scott syndrome","type":"related"},{"name":"Aarskog disease","type":"broad"},{"name":"Aarskog syndrome","type":"broad"},{"name":"Aarskog syndrome, X-linked","type":"exact"},{"name":"Aarskog-Scott syndrome","type":"broad"},{"name":"Aarskog-Scott syndrome, X-linked","type":"exact"},{"name":"Aarskog-Scott syndrome, X-linked recessive","type":"exact"},{"name":"Aarskog-like syndrome","type":"broad"},{"name":"FGD","type":"broad"},{"name":"FGDY","type":"broad"},{"name":"MRXS16, included","type":"narrow"},{"name":"Scott Aarskog syndrome","type":"broad"},{"name":"facio-digito-genital dysplasia","type":"broad"},{"name":"faciodigitogenital syndrome","type":"broad"},{"name":"faciodigitogenital syndrome, recessive","type":"broad"},{"name":"faciogenital dysplasia","type":"broad"},{"name":"faciogenital dysplasia with attention Deficit-hyperactivity disorder","type":"related"},{"name":"mental retardation, X-linked syndromic 16, X-linked recessive","type":"exact"},{"name":"mental retardation, X-linked, syndromic 16","type":"narrow"},{"name":"mental retardation, X-linked, syndromic 16, included","type":"narrow"}],"termid":"MONDO:0010589","xrefs":{"Monarch":{"xref_id":"0010589"}}}


id: MONDO:0002245
data:
  {"annotated_genes":["SJAG_04887","SJAG_01784","SJAG_02431","SJAG_02951","SJAG_04312","SJAG_04003","SJAG_02091","SJAG_01732","SJAG_02744","SJAG_04387","SJAG_01852","SJAG_02093","SJAG_04509","SJAG_03204","SJAG_03703","SJAG_04621","SJAG_02509","SJAG_03818"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957580"},{"annotations":[85646,85647,85645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018794"},{"annotations":[85886,85885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015912"},{"annotations":[86165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800047"},{"annotations":[86483,86484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030827"},{"annotations":[85433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014757"},{"annotations":[84683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014078"},{"annotations":[86253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014518"},{"annotations":[86717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010743"},{"annotations":[86679,86678,86680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958333"},{"annotations":[85834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012775"},{"annotations":[86613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","definition":"Disorders caused by abnormalities in platelet count or function.","definition_xrefs":["MESH:D001791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":18,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01784":null,"SJAG_01852":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02744":null,"SJAG_02951":null,"SJAG_03204":null,"SJAG_03703":null,"SJAG_03818":null,"SJAG_04003":null,"SJAG_04312":null,"SJAG_04387":null,"SJAG_04509":null,"SJAG_04621":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"blood platelet disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C131634","UMLS:C0151854","MEDGEN:57492","SCTID:22716005"],"synonyms":[{"name":"platelet abnormality","type":"exact"},{"name":"platelet disorder","type":"exact"},{"name":"thrombocytopathy","type":"related"}],"termid":"MONDO:0002245","terms_by_termid":{"MONDO:0010121":null,"MONDO:0010743":null,"MONDO:0012775":null,"MONDO:0014078":null,"MONDO:0014518":null,"MONDO:0014757":null,"MONDO:0015912":null,"MONDO:0018794":null,"MONDO:0030827":null,"MONDO:0800047":null,"MONDO:0957580":null,"MONDO:0958333":null},"xrefs":{"Monarch":{"xref_id":"0002245"}}}


id: MONDO:0001646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild to moderate high blood pressure that is caused by an underlying medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary hypertension","termid":"MONDO:0001200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign secondary hypertension","secondary_identifiers":["MEDGEN:57610","SCTID:194785008","UMLS:C0155620","DOID:13143","ICD9:405.1","ICD9:405.19"],"termid":"MONDO:0001646","xrefs":{"Monarch":{"xref_id":"0001646"}}}


id: PBO:0071272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 6","termid":"PBO:0071272"}


id: GO:0061249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a mesonephric glomerular capillary. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular capillary formation","termid":"GO:0072104"},{"relation_name":"part_of","term_name":"mesonephric glomerulus vasculature morphogenesis","termid":"GO:0061248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular capillary formation","termid":"GO:0061249"}


id: MONDO:0017697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to glycogen branching enzyme deficiency","termid":"MONDO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease due to glycogen branching enzyme deficiency, fatal perinatal neuromuscular form","secondary_identifiers":["Orphanet:308655","GARD:17396","NANDO:2201161","UMLS:C1856303","MEDGEN:383883"],"synonyms":[{"name":"GBE deficiency, fatal perinatal neuromuscular form","type":"exact"},{"name":"GSD due to glycogen branching enzyme deficiency, fatal perinatal neuromuscular form","type":"exact"},{"name":"GSD type 4, fatal perinatal neuromuscular form","type":"exact"},{"name":"GSDIV, fatal perinatal neuromuscular form","type":"exact"},{"name":"glycogen storage disease type 4, fatal perinatal neuromuscular form","type":"exact"},{"name":"glycogen storage disease type IV, fatal perinatal neuromuscular form","type":"exact"},{"name":"glycogenosis due to glycogen branching enzyme deficiency, fatal perinatal neuromuscular form","type":"exact"},{"name":"glycogenosis type 4, fatal perinatal neuromuscular form","type":"exact"},{"name":"glycogenosis type IV, fatal perinatal neuromuscular form","type":"exact"}],"termid":"MONDO:0017697","xrefs":{"Monarch":{"xref_id":"0017697"}}}


id: MONDO:0800478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by an uncommon and relatively unknown cause of facial ulceration that occurs after damage to the trigeminal nerve. It characteristically involves non-healing facial ulceration(s) with accompanying anesthesia, paresthesia, and dysesthesia along the distribution of a trigeminal dermatome.","definition_xrefs":["PMID:37089852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigeminal trophic syndrome","secondary_identifiers":["icd11.foundation:983392135","MEDGEN:698241","Orphanet:664901","UMLS:C1274928"],"synonyms":[{"name":"TTS","type":"exact"}],"termid":"MONDO:0800478","xrefs":{"Monarch":{"xref_id":"0800478"}}}


id: GO:2000576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of microtubule motor activity.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of microtubule motor activity (obsolete GO:2000576)","synonyms":[{"name":"positive regulation of axonemal motor activity","type":"related"},{"name":"positive regulation of dynein","type":"related"},{"name":"positive regulation of dynein ATPase activity","type":"related"},{"name":"positive regulation of kinesin","type":"related"},{"name":"positive regulation of kinesin motor activity","type":"related"},{"name":"positive regulation of kinetochore motor activity","type":"related"}],"termid":"GO:2000576"}


id: PBO:0051780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing C","termid":"PBO:0051780"}


id: PBO:0083000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic seryl-tRNA synthetase; class II aminoacyl-tRNA synthetase that aminoacylates tRNA(Ser), displays tRNA-dependent amino acid recognition which enhances discrimination of the serine substrate, interacts with peroxin Pex21p","termid":"PBO:0083000"}


id: PBO:0055708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin, mannose binding 2 like","termid":"PBO:0055708"}


id: PBO:0030807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_cortex","termid":"PBO:0030807"}


id: GO:0061087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K27 methylation (obsolete GO:0061087)","termid":"GO:0061087"}


id: PBO:0116275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic gamma-glutamyl phosphate reductase; catalyzes the second step in proline biosynthesis","termid":"PBO:0116275"}


id: PBO:0090007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor for histones, zf-GATA-type Ams2","termid":"PBO:0090007"}


id: GO:0015011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an enzyme cofactor consisting of a tetrapyrrole structure containing nickel, such as the F-430 cofactor found in methyl-coenzyme M reductase.","definition_xrefs":["Wikipedia:Cofactor_F430","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"nickel-tetrapyrrole coenzyme metabolic process","synonyms":[{"name":"coenzyme F430 metabolic process","type":"narrow"},{"name":"nickel-tetrapyrrole coenzyme metabolism","type":"exact"}],"termid":"GO:0015011"}


id: MONDO:0014048
data:
  {"annotated_genes":["SJAG_04206","SJAG_04394","SJAG_02426"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84769,84770,84771],"is_not":false,"summary":null,"term":"MONDO:0014048"}]},"cv_name":"mondo","definition":"Any Cowden disease in which the cause of the disease is a mutation in the AKT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"Cowden syndrome 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16465","MEDGEN:767433","DOID:0081002","UMLS:C3554519","OMIM:615109"],"synonyms":[{"name":"AKT1 Cowden disease","type":"exact"},{"name":"CWS6","type":"related"},{"name":"Cowden disease caused by mutation in AKT1","type":"exact"},{"name":"Cowden syndrome 6","type":"exact"},{"name":"Cowden syndrome type 6","type":"exact"}],"termid":"MONDO:0014048","terms_by_termid":{"MONDO:0014048":null},"xrefs":{"Monarch":{"xref_id":"0014048"}}}


id: PBO:0040619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP and activin membrane bound inhibitor","termid":"PBO:0040619"}


id: MONDO:1010409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, chicken","secondary_identifiers":["OMIA:000344-9031"],"termid":"MONDO:1010409","xrefs":{"Monarch":{"xref_id":"1010409"}}}


id: PBO:0109370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 5","termid":"PBO:0109370"}


id: FYECO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with arginine as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, arginine nitrogen source","synonyms":[{"name":"glucose minimal medium, arginine nitrogen source","type":"exact"}],"termid":"FYECO:0000331"}


id: PBO:0047884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(p14)","termid":"PBO:0047884"}


id: GO:0061367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behaviour of an organism as a result of an acetic acid pain stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral response to chemical pain","termid":"GO:0061366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to acetic acid induced pain","termid":"GO:0061367"}


id: GO:0062207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a pattern recognition receptor signaling pathway.","definition_xrefs":["PMID:30610168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"}


id: GO:0060939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epicardial-derived cardiac fibroblast over time, from its formation to the mature state. A epicardial-derived cardiac fibroblast is a connective tissue cell of the heart that arises from the epicardium and secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell development","termid":"GO:0060936"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell differentiation","termid":"GO:0060938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac fibroblast cell development","termid":"GO:0060939"}


id: PBO:0076098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 4","termid":"PBO:0076098"}


id: MOD:01935
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["PubMed:22045808","RESID:AA0589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated lysine","termid":"MOD:01047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glucosyl-L-hydroxylysine","synonyms":[{"name":"(D-glucopyranosyl)oxy-L-lysine","type":"exact"},{"name":"CARBOHYD O-linked (Glc) hydroxylysine","type":"exact"},{"name":"O-glucosyl-L-hydroxylysine","type":"exact"}],"termid":"MOD:01935"}


id: GO:2000413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibronectin-dependent thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thymocyte migration","termid":"GO:2000410"},{"relation_name":"regulates","term_name":"fibronectin-dependent thymocyte migration","termid":"GO:0072681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibronectin-dependent thymocyte migration","synonyms":[{"name":"regulation of fibronectin-dependent immature T cell migration","type":"related"},{"name":"regulation of fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"regulation of fibronectin-dependent immature T-cell migration","type":"related"},{"name":"regulation of fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"regulation of fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000413"}


id: GO:0061493
data:
  {"annotated_genes":["SJAG_04901","SJAG_02795","SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96361,97778,99346],"is_not":false,"summary":null,"term":"GO:0061493"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the inner plaque is on the nuclear face of the spindle pole body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central plaque of spindle pole body","termid":"GO:0005823"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02246":null,"SJAG_02795":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005816"],"is_obsolete":false,"name":"central plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061493","terms_by_termid":{"GO:0061493":null}}


id: GO:0017184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of peptidyl-diphthamide, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthamide catabolic process (obsolete GO:0017184)","synonyms":[{"name":"peptidyl-diphthamide breakdown","type":"exact"},{"name":"peptidyl-diphthamide catabolism","type":"exact"},{"name":"peptidyl-diphthamide degradation","type":"exact"}],"termid":"GO:0017184"}


id: GO:0102520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O-phospho-L-threonine + H2O = L-threonine + hydrogenphosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete L-threonine O-3-phosphate phosphatase activity (obsolete GO:0102520)","termid":"GO:0102520"}


id: GO:0033326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of cerebrospinal fluid (CSF) from the choroid plexus of the lateral, third and fourth ventricles. The cerebrospinal fluid is a clear liquid that located within the ventricles, spinal canal, and subarachnoid spaces.","definition_xrefs":["PMID:10716451","GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cerebrospinal fluid secretion","synonyms":[{"name":"CSF secretion","type":"exact"}],"termid":"GO:0033326"}


id: PBO:0072031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 1","termid":"PBO:0072031"}


id: MONDO:0024528
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86061],"is_not":false,"summary":null,"term":"MONDO:0024528"}]},"cv_name":"mondo","definition":"Any autosomal dominant progressive external ophthalmoplegia in which the cause of the disease is a mutation in the POLG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant progressive external ophthalmoplegia","termid":"MONDO:0008003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0002320","MONDO:0005336","MONDO:0000426","MONDO:0005066"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:157640","MEDGEN:371919","UMLS:C1834846","DOID:0111521","GARD:13174"],"synonyms":[{"name":"PEOA1","type":"exact"},{"name":"POLG autosomal dominant progressive external ophthalmoplegia","type":"exact"},{"name":"autosomal dominant progressive external ophthalmoplegia caused by mutation in POLG","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 1","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal dominant 1","type":"exact"}],"termid":"MONDO:0024528","terms_by_termid":{"MONDO:0024528":null},"xrefs":{"Monarch":{"xref_id":"0024528"}}}


id: PBO:0074579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stannin","termid":"PBO:0074579"}


id: PBO:0028536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0028536"}


id: SO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inverted repeat (SO:0000294) occurring at the 3-prime termini of a DNA transposon.","direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat","termid":"SO:0000481"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_terminal_inverted_repeat","synonyms":[{"name":"3' TIR","type":"exact"},{"name":"three prime terminal inverted repeat","type":"exact"}],"termid":"SO:0000421"}


id: PBO:0085197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Osmotic stress-responsive phosphorelay intermediate sensor protein; phosphorylated by the plasma membrane sensor Sln1p in response to osmotic stress and then in turn phosphorylates the response regulators Ssk1p in the cytosol and Skn7p in the nucleus","termid":"PBO:0085197"}


id: SO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000082 processed_transcript_attribute (obsolete SO:0000082)","termid":"SO:0000082"}


id: PBO:0041377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 54","termid":"PBO:0041377"}


id: PBO:0048642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein beta 2","termid":"PBO:0048642"}


id: PBO:0055526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2960","termid":"PBO:0055526"}


id: GO:0019278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar catabolic process","termid":"GO:0009227"},{"relation_name":"is_a","term_name":"UDP-N-acetylgalactosamine metabolic process","termid":"GO:0019276"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine catabolic process","synonyms":[{"name":"UDP-N-acetylgalactosamine breakdown","type":"exact"},{"name":"UDP-N-acetylgalactosamine catabolism","type":"exact"},{"name":"UDP-N-acetylgalactosamine degradation","type":"exact"}],"termid":"GO:0019278"}


id: MONDO:0011435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 2, primary, autosomal recessive, with or without cortical malformations","secondary_identifiers":["GARD:15366","OMIM:604317","MEDGEN:346929","UMLS:C1858535","DOID:0070293","MESH:C565794"],"synonyms":[{"name":"MCPH2","type":"related"},{"name":"microcephaly 2, primary, autosomal recessive, with or without cortical malformations","type":"exact"}],"termid":"MONDO:0011435","xrefs":{"Monarch":{"xref_id":"0011435"}}}


id: MONDO:0008710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Carpenter syndrome in which the cause of the disease is a mutation in the RAB23 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Carpenter syndrome","termid":"MONDO:0019012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"RAB23-related Carpenter syndrome","secondary_identifiers":["GARD:15128","SCTID:205813009","UMLS:C4551510","OMIM:201000","MEDGEN:1644017"],"synonyms":[{"name":"ACPS 2","type":"broad"},{"name":"CARPENTER syndrome 1","type":"related"},{"name":"CRPT1","type":"related"},{"name":"Carpenter syndrome","type":"broad"},{"name":"Carpenter syndrome 1","type":"exact"},{"name":"Carpenter syndrome caused by mutation in RAB23","type":"exact"},{"name":"Carpenter syndrome type 1","type":"exact"},{"name":"RAB23 Carpenter syndrome","type":"exact"},{"name":"RAB23-related Carpenter syndrome","type":"exact"},{"name":"acrocephalopolysyndactyly type 2","type":"broad"}],"termid":"MONDO:0008710","xrefs":{"Monarch":{"xref_id":"0008710"}}}


id: PBO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculomotor apraxia 1","termid":"PBO:0010274"}


id: PBO:0045512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSTN pseudogene 4","termid":"PBO:0045512"}


id: GO:0042971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of lactone from one side of a membrane to the other. A lactone is a cyclic ester of a hydroxy carboxylic acid, containing a 1-oxacycloalkan-2-one structure, or an analogue having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lactone transmembrane transporter activity (obsolete GO:0042971)","termid":"GO:0042971"}


id: PR:O13774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP cyclohydrolase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00727","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.13","secondary_identifiers":["UniProtKB:O13774"],"synonyms":[{"name":"GTP cyclohydrolase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GTP-CH-I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GCH1","type":"exact"}],"termid":"PR:O13774"}


id: GO:0033398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of zeatin, 2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin biosynthetic process","termid":"GO:0009691"},{"relation_name":"is_a","term_name":"zeatin metabolic process","termid":"GO:0033397"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zeatin biosynthetic process","synonyms":[{"name":"zeatin anabolism","type":"exact"},{"name":"zeatin biosynthesis","type":"exact"},{"name":"zeatin formation","type":"exact"},{"name":"zeatin synthesis","type":"exact"}],"termid":"GO:0033398"}


id: MONDO:0850514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia","termid":"MONDO:0000507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005336","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"inclusion body myopathy and brain white matter abnormalities","secondary_identifiers":["MEDGEN:1812978","DOID:0081121","UMLS:C5676909","OMIM:619733"],"termid":"MONDO:0850514","xrefs":{"Monarch":{"xref_id":"0850514"}}}


id: MONDO:0024781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked recessive immunologic disorder characterized by the onset of recurrent sinopulmonary, mucosal, and other infections in early childhood, usually accompanied by refractory autoimmune cytopenias. Affected individuals have bacterial, viral, and fungal infections, as well as hemolytic anemia, thrombocytopenia, lymphopenia, and decreased NK cells. Laboratory studies show defective T-cell proliferation and function, likely due to signaling abnormalities. The disorder may also manifest as a hyperinflammatory state with immune dysregulation.","definition_xrefs":["OMIM:301082","PMID:33876203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 102","secondary_identifiers":["Orphanet:653751","UMLS:C5676886","MEDGEN:1812534"],"synonyms":[{"name":"IMD102","type":"exact"},{"name":"SASH3 deficiency","type":"exact"},{"name":"X-linked CID due to SASH3 deficiency","type":"exact"},{"name":"X-linked combined immunodeficiency due to SASH3 deficiency","type":"exact"},{"name":"immunodeficiency 102","type":"exact"}],"termid":"MONDO:0024781","xrefs":{"Monarch":{"xref_id":"0024781"}}}


id: PBO:0054710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2119","termid":"PBO:0054710"}


id: MONDO:0034733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare otorhinolaryngological malformation characterized by a hypoplastic or absent cochlear nerve, resulting in variable hearing loss or total deafness, depending on the quantity of nerve fibers present. The condition can be unilateral or bilateral, occur as an isolated malformation or in the context of a complex syndrome, and may be associated with a hypoplastic internal auditory or cochlear nerve canal. [Orphanet:502318]","definition_xrefs":["Orphanet:502318"],"gene_count":0,"genotype_count":0,"name":"obsolete cochlear nerve deficiency (obsolete MONDO:0034733)","secondary_identifiers":["ICD10CM:H93.3"],"termid":"MONDO:0034733","xrefs":{"Monarch":{"xref_id":"0034733"}}}


id: PBO:0067068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 96, pseudogene","termid":"PBO:0067068"}


id: PBO:0067317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 403, pseudogene","termid":"PBO:0067317"}


id: PBO:0004468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor D, Alp1","termid":"PBO:0004468"}


id: PBO:0013751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol 14-demethylase Erg11 (predicted)","termid":"PBO:0013751"}


id: GO:0061598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction ATP + molybdopterin = diphosphate + adenylyl-molybdopterin.","definition_xrefs":["EC:2.7.7.75","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"molybdopterin adenylyltransferase activity","secondary_identifiers":["RHEA:31331"],"termid":"GO:0061598"}


id: PBO:0059490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSS51 mitochondrial translational activator","termid":"PBO:0059490"}


id: MONDO:0003471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease involving Pediculus humanus capitis.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lice infestation","termid":"MONDO:0003472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Pediculus humanus capitis infestation","secondary_identifiers":["MEDGEN:508022","DOID:5501","UMLS:C0030757","ICD9:132.0","SCTID:81000006"],"synonyms":[{"name":"Pediculus capitis","type":"exact"},{"name":"Pediculus capitis [head louse]","type":"exact"},{"name":"Pediculus capitis infestation","type":"exact"},{"name":"Pediculus humanus capitis infection","type":"exact"},{"name":"head louse infestation","type":"exact"},{"name":"infections, Pediculus humanus capitis","type":"related"},{"name":"pediculosis capitis","type":"exact"}],"termid":"MONDO:0003471","xrefs":{"Monarch":{"xref_id":"0003471"}}}


id: FYPO:0002361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3 acetylation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone acetylation during vegetative growth","termid":"FYPO:0000456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone H3 acetylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002361"}


id: PBO:0070451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 8","termid":"PBO:0070451"}


id: PBO:0057447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 567","termid":"PBO:0057447"}


id: GO:0003388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron over time, that contributes to the development of the amphid sensory organ.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"neuron differentiation involved in amphid sensory organ development","termid":"GO:0003387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron development involved in amphid sensory organ development","termid":"GO:0003388"}


id: GO:0050295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesteryl-beta-D-glucoside + H2O = D-glucose + cholesterol.","definition_xrefs":["EC:3.2.1.104","RHEA:11956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"steryl-beta-glucosidase activity","secondary_identifiers":["MetaCyc:STERYL-BETA-GLUCOSIDASE-RXN","KEGG_REACTION:R01460"],"synonyms":[{"name":"cholesteryl-beta-D-glucoside glucohydrolase activity","type":"related"},{"name":"steryl-b-glucosidase activity","type":"exact"}],"termid":"GO:0050295"}


id: GO:0015979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photosynthesis","secondary_identifiers":["Wikipedia:Photosynthesis"],"termid":"GO:0015979"}


id: GO:0160097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle, is driven by ATP hydrolysis.","definition_xrefs":["PMID:25013168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"reverse gyrase activity","secondary_identifiers":["WIKIPEDIA:Reverse_gyrase"],"termid":"GO:0160097"}


id: GO:0071112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta4 integrin complex bound to EMILIN-1 (ElastinMicrofibril Interface Located ProteIN).","definition_xrefs":["PMID:12456677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha4-beta4 integrin-EMILIN-1 complex","synonyms":[{"name":"ITGA4-ITGB4-EMILIN1 complex","type":"narrow"}],"termid":"GO:0071112"}


id: FYPO:0000082
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118948,119004],"is_not":false,"summary":null,"term":"FYPO:0000082"},{"annotations":[118962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001408"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the growth of a population of cells is decreased relative to normal in the vegetative growth phase of the life cycle at high temperatures.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02527":null,"SJAG_04464":null,"SJAG_04697":null},"genotype_count":3,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0001985","FYPO:0005447","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth at high temperature","references_by_uniquename":{"PMID:28954740":null,"PMID:36058798":null,"PMID:37233261":null},"secondary_identifiers":["FYPO:0000247"],"single_locus_annotated_genes":["SJAG_02527","SJAG_04464","SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased cell population growth at high temperature during mitotic cell cycle","type":"related"},{"name":"decreased growth at high temperature","type":"broad"},{"name":"decreased vegetative cell population growth at high temperature","type":"exact"},{"name":"growth defect, slow growth at high temperatures","type":"narrow"},{"name":"heat sensitive","type":"related"},{"name":"heat sensitivity: increased","type":"related"},{"name":"hypersensitive to high temperature","type":"related"},{"name":"reduced growth at high temperature","type":"exact"},{"name":"sensitive to heat","type":"related"},{"name":"sensitive to high temperature","type":"related"},{"name":"sensitive to high temperature during vegetative growth","type":"related"},{"name":"slow growth at high temperature","type":"narrow"},{"name":"temperature sensitive","type":"related"}],"termid":"FYPO:0000082","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000117":null,"FYECO:0000137":null,"FYPO:0000082":null,"FYPO:0001408":null,"FYPO_EXT:0000002":null}}


id: PBO:0069608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 885, pseudogene","termid":"PBO:0069608"}


id: PBO:0054305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1697","termid":"PBO:0054305"}


id: PBO:0051030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 1","termid":"PBO:0051030"}


id: FYPO:0003265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity increases normally (i.e. as in wild type) as a result of a heat stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity increase during cellular response to heat stress","synonyms":[{"name":"normal increase in trehalase activity in response to heat stress","type":"exact"},{"name":"normal neutral trehalase activity increase during cellular response to heat stress","type":"exact"},{"name":"normal trehalase activity increase during cellular response to heat stress","type":"broad"}],"termid":"FYPO:0003265"}


id: PBO:0083136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity protein phosphatase; maintains low levels of both basal and induced cell integrity pathway signaling by dephosphorylation of the Slt2p MAPK; reciprocally regulated by Slt2p through phosphorylation; minor role with Ptp2p in the adaptive response to pheromone through the dephosphorylation of the Fus3p MAPK with major contribution by Ptp3p; inhibits the nuclear accumulation of Fus3p; two isoforms exist as the result of alternative translation initiation starts","termid":"PBO:0083136"}


id: PBO:0002778
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cryptic Loci Regulator","termid":"PBO:0002778"}


id: PBO:0088849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap113","termid":"PBO:0088849"}


id: MONDO:0017290
data:
  {"annotated_genes":["SJAG_03011","SJAG_05194","SJAG_03363","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[86564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[86501,86502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[85406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[86440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"An instance of intrahepatic cholestasis that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"intrahepatic cholestasis","termid":"MONDO:0019072"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"familial intrahepatic cholestasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:576.8","GARD:21119","Orphanet:284385","SCTID:74162007"],"synonyms":[{"name":"hereditary intrahepatic cholestasis","type":"exact"}],"termid":"MONDO:0017290","terms_by_termid":{"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013995":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0017290"}}}


id: PBO:0088392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Rsv2","termid":"PBO:0088392"}


id: PBO:0080938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc activated ion channel","termid":"PBO:0080938"}


id: GO:2000055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000055)","synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000055"}


id: GO:0047433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-methyl-2-oxopentanoate + H+ = 2-methylbutanal + CO2.","definition_xrefs":["EC:4.1.1.72","RHEA:21108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"branched-chain-2-oxoacid decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03894","MetaCyc:4.1.1.72-RXN"],"synonyms":[{"name":"(3S)-3-methyl-2-oxopentanoate carboxy-lyase (2-methylbutanal-forming)","type":"related"},{"name":"(3S)-3-methyl-2-oxopentanoate carboxy-lyase activity","type":"related"},{"name":"BCKA","type":"related"},{"name":"branched-chain alpha-keto acid decarboxylase activity","type":"related"},{"name":"branched-chain keto acid decarboxylase activity","type":"related"},{"name":"branched-chain oxo acid decarboxylase activity","type":"related"}],"termid":"GO:0047433"}


id: PATO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellularity quality inhering in a bearer by virtue of the bearer's consisting of exactly one cell.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularity","termid":"PATO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unicellular","termid":"PATO:0001994"}


id: PBO:0088654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding involved in ER to Golgi vesicle transport Yip3","termid":"PBO:0088654"}


id: MONDO:0018761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"SMARCA4-deficient sarcoma of thorax","secondary_identifiers":["GARD:21943","MEDGEN:1806595","Orphanet:466962","DOID:0080532","UMLS:C5554190"],"synonyms":[{"name":"SMARCA4-deficient thoracic sarcoma","type":"exact"}],"termid":"MONDO:0018761","xrefs":{"Monarch":{"xref_id":"0018761"}}}


id: PBO:0089861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex subunit, ATP-dependent RNA helicase Fal1 (conflicting process, human yeast)","termid":"PBO:0089861"}


id: GO:0061392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:dph","PMID:12086627","PMID:9858577"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to osmotic stress (obsolete GO:0061392)","termid":"GO:0061392"}


id: GO:0051704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A biological process which involves another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism process (obsolete GO:0051704)","synonyms":[{"name":"interaction between organisms","type":"exact"},{"name":"physiological interaction between organisms","type":"exact"},{"name":"physiological interaction with other organism","type":"exact"}],"termid":"GO:0051704"}


id: GO:0018798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gallate + H+ = CO2 + pyrogallol.","definition_xrefs":["EC:4.1.1.59","RHEA:12749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"gallate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03247","UM-BBD_reactionID:r0005","MetaCyc:GALLATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"gallate carboxy-lyase (pyrogallol-forming)","type":"related"},{"name":"gallate carboxy-lyase activity","type":"related"},{"name":"gallic acid decarboxylase activity","type":"exact"}],"termid":"GO:0018798"}


id: MONDO:1010080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thrombocytopenia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, non-human animal","secondary_identifiers":["OMIA:001001"],"termid":"MONDO:1010080","xrefs":{"Monarch":{"xref_id":"1010080"}}}


id: GO:0070781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotin stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to biotin","synonyms":[{"name":"response to Bios IIB","type":"exact"},{"name":"response to coenzyme R","type":"exact"},{"name":"response to vitamin B7","type":"exact"},{"name":"response to vitamin H","type":"exact"}],"termid":"GO:0070781"}


id: GO:0098874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of sequential, propagated action potentials occurring in a single cell.","definition_xrefs":["ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spike train","secondary_identifiers":["GO:0099603"],"synonyms":[{"name":"burst of action potentials","type":"exact"},{"name":"spike-train","type":"exact"}],"termid":"GO:0098874"}


id: GO:0100042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates pseudohyphal growth.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pseudohyphal growth by transcription from RNA polymerase II promoter (obsolete GO:0100042)","termid":"GO:0100042"}


id: PR:O74453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A p21-activated protein kinase-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04409","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shk1 kinase-binding protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.08c","secondary_identifiers":["UniProtKB:O74453"],"synonyms":[{"name":"Spom972h-PAK1IP1","type":"exact"}],"termid":"PR:O74453"}


id: GO:1902626
data:
  {"annotated_genes":["SJAG_04492","SJAG_03458","SJAG_01420","SJAG_02508","SJAG_01454","SJAG_04669","SJAG_04940","SJAG_01606","SJAG_00722","SJAG_04004","SJAG_04108","SJAG_00882","SJAG_02830","SJAG_02952","SJAG_03080","SJAG_01811","SJAG_04395","SJAG_02759","SJAG_03466","SJAG_00689","SJAG_00949","SJAG_03012","SJAG_01839"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89138,91896,92312,92713,97476,98681,99895,100083,100225,102008,102993,105468,106902,108467,110260,110893,111588,112345,115220,115221,115605,116094,118333],"is_not":false,"summary":null,"term":"GO:1902626"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the large subunit precursor of the preribosome.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","GOC:di","PMID:22735702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"ribosomal large subunit assembly","termid":"GO:0000027"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02508":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_04004":null,"SJAG_04108":null,"SJAG_04395":null,"SJAG_04492":null,"SJAG_04669":null,"SJAG_04940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"assembly of large subunit precursor of preribosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"66S preribosome assembly","type":"narrow"},{"name":"66S preribosome formation","type":"narrow"},{"name":"preribosome, large subunit precursor formation","type":"exact"}],"termid":"GO:1902626","terms_by_termid":{"GO:1902626":null}}


id: PBO:0029571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore_population","termid":"PBO:0029571"}


id: PBO:0054794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2208","termid":"PBO:0054794"}


id: GO:0048870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another.","definition_xrefs":["GOC:dgh","GOC:mlg","GOC:isa_complete","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility","synonyms":[{"name":"cell locomotion","type":"exact"},{"name":"cell movement","type":"related"},{"name":"movement of a cell","type":"exact"}],"termid":"GO:0048870"}


id: PBO:0042396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine deaminase","termid":"PBO:0042396"}


id: GO:0006756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into AMP, adenosine monophosphate, to produce ADP. Addition of two phosphate groups produces ATP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP biosynthetic process","termid":"GO:0006754"},{"relation_name":"is_a","term_name":"AMP metabolic process","termid":"GO:0046033"},{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"AMP phosphorylation","termid":"GO:0006756"}


id: PBO:0085964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the high-frequency loss of mini-chromosomes, probably by increasing the rate of proper chromosome segregation; translated gene product of YCR041W, but not its transcript, is responsible for suppression; suppression ability of YCR041W is completely dependent on silencing protein Sir4p","termid":"PBO:0085964"}


id: PBO:0114108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, WD repeat subunit Swd22","termid":"PBO:0114108"}


id: PBO:0059051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific nuclear structural 1","termid":"PBO:0059051"}


id: GO:0052242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis in other organism involved in symbiotic interaction (obsolete GO:0052242)","synonyms":[{"name":"chemotaxis in other organism during symbiotic interaction","type":"related"},{"name":"chemotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052242"}


id: PBO:0086865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; implicated in the regulation of phospholipid asymmetry through the activation of phospholipid translocases (flippases); involved in the phosphorylation of upstream inhibitory kinase Ypk1p along with Fpk1p; has a redundant role in the cellular response to mating pheromone; KIN82 has a paralog, FPK1, that arose from the whole genome duplication","termid":"PBO:0086865"}


id: PBO:0079477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWSG1 divergent transcript","termid":"PBO:0079477"}


id: GO:1905390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukotriene B4 stimulus.","definition_xrefs":["GO_REF:0000071","PMID:14656734","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"response to leukotriene B4","termid":"GO:1905389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leukotriene B4","synonyms":[{"name":"cellular response to LTB4","type":"exact"}],"termid":"GO:1905390"}


id: MONDO:0010276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radioulnar synostosis, radial ray abnormalities, and severe malformations in the male","secondary_identifiers":["OMIM:300233","UMLS:C1846147","MESH:C564557","MEDGEN:335349"],"synonyms":[{"name":"radioulnar synostosis, radial RAY abnormalities, and severe malformations in the MALE","type":"related"}],"termid":"MONDO:0010276","xrefs":{"Monarch":{"xref_id":"0010276"}}}


id: PBO:0013097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead transcription factor Sep1","termid":"PBO:0013097"}


id: GO:0048524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a multi-organism process in which a virus is a participant.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"positively_regulates","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral process","synonyms":[{"name":"activation of viral life cycle","type":"narrow"},{"name":"positive regulation of viral life cycle","type":"narrow"},{"name":"positive regulation of viral reproduction","type":"narrow"},{"name":"stimulation of viral life cycle","type":"narrow"},{"name":"up regulation of viral life cycle","type":"narrow"},{"name":"up-regulation of viral life cycle","type":"narrow"},{"name":"upregulation of viral life cycle","type":"narrow"}],"termid":"GO:0048524"}


id: PBO:0074419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 18","termid":"PBO:0074419"}


id: GO:0045764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amino acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"positively_regulates","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"positive regulation of amino acid metabolic process","synonyms":[{"name":"activation of amino acid metabolic process","type":"narrow"},{"name":"positive regulation of amino acid metabolism","type":"exact"},{"name":"positive regulation of cellular amino acid metabolic process","type":"exact"},{"name":"stimulation of amino acid metabolic process","type":"narrow"},{"name":"up regulation of amino acid metabolic process","type":"exact"},{"name":"up-regulation of amino acid metabolic process","type":"exact"},{"name":"upregulation of amino acid metabolic process","type":"exact"}],"termid":"GO:0045764"}


id: FYPO:0001192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which vegetative cell growth is normal (i.e. indistinguishable from wild type) in a medium containing one or more enzymes that degrades cell wall polysaccharides.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on cell wall-degrading enzymes","secondary_identifiers":["FYPO:0001193"],"synonyms":[{"name":"normal cell population growth in presence of cell wall-degrading enzymes","type":"exact"},{"name":"normal cell population growth on Lyticase","type":"narrow"},{"name":"normal cell population growth on Novozyme 234","type":"narrow"},{"name":"normal cell population growth on Zymolyase","type":"narrow"},{"name":"normal cell population growth on beta-1,3-glucan laminaripentaohydrolase","type":"narrow"},{"name":"normal cell population growth on cell wall-degrading enzymes","type":"exact"},{"name":"normal cell population growth on lysing enzymes from Trichoderma harzianum","type":"narrow"},{"name":"normal cellular response to cell wall-degrading enzymes","type":"related"},{"name":"normal vegetative cell population growth on cell wall-degrading enzymes","type":"exact"}],"termid":"FYPO:0001192"}


id: PBO:0059310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51 pseudogene 1","termid":"PBO:0059310"}


id: FYPO:0000491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial genome maintenance does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial genome maintenance","termid":"FYPO:0000490"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitochondrial genome maintenance","synonyms":[{"name":"abolished mitochondrial genome maintenance during mitotic cell cycle","type":"related"},{"name":"absent mitochondrial genome maintenance","type":"exact"},{"name":"mitochondrial genome maintenance abolished","type":"exact"},{"name":"mitochondrial genome maintenance abolished during vegetative growth","type":"exact"},{"name":"mitochondrial genome maintenance: absent","type":"related"}],"termid":"FYPO:0000491"}


id: PBO:0091342
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human BCL2","termid":"PBO:0091342"}


id: PBO:0002840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase Win1","termid":"PBO:0002840"}


id: RO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure  (e.g.- a brain region) in which its dendrite receives synaptic input.\\n\\n\t","direct_ancestors":[{"relation_name":"is_a","term_name":"has_postsynaptic_terminal_in","termid":"RO:0002110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendrite_synapsed_in","termid":"RO:0002121"}


id: MONDO:0006357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from a pleomorphic adenoma in the parotid gland. Patients usually present with a history of a long-standing tumor mass which grew rapidly in the past few months. Patients with non-invasive or minimally invasive carcinoma have an excellent prognosis. In cases where there is invasion of the surrounding tissues, the clinical course is aggressive.","definition_xrefs":["NCIT:C5974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"major salivary gland carcinoma ex pleomorphic adenoma","termid":"MONDO:0006285"},{"relation_name":"is_a","term_name":"carcinoma of parotid gland","termid":"MONDO:0021331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"parotid gland carcinoma ex pleomorphic adenoma","secondary_identifiers":["UMLS:C1335356","EFO:1000461","SCTID:425127006","MEDGEN:233311"],"synonyms":[{"name":"carcinoma ex pleomorphic adenoma of parotid","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma of parotid gland","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma of the parotid","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma of the parotid gland","type":"exact"},{"name":"parotid carcinoma ex pleomorphic adenoma","type":"exact"},{"name":"parotid gland carcinoma ex pleomorphic adenoma","type":"exact"}],"termid":"MONDO:0006357","xrefs":{"Monarch":{"xref_id":"0006357"}}}


id: PBO:0085030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-ATPase base subunit of the 19S RP of the 26S proteasome; may participate in the recognition of several ligands of the proteasome; contains a leucine-rich repeat (LRR) domain, a site for protein-protein interactions; RP is the acronym for regulatory particle","termid":"PBO:0085030"}


id: MONDO:0018569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked microcephaly-growth retardation-prognathism-cryptorchidism syndrome is a rare syndromic intellectual disability characterized by hypotonia, microcephaly, severe developmental delay, seizures, intellectual disability, growth retardation, cardiovascular septal defects, cryptorchidism, hypospadias, and dysmorphic features - prominent ears, prognathism, thin upper lip, dental crowding.","definition_xrefs":["Orphanet:435938"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked microcephaly-growth retardation-prognathism-cryptorchidism syndrome","secondary_identifiers":["GARD:17721","MEDGEN:1812501","UMLS:C5681178"],"termid":"MONDO:0018569","xrefs":{"Monarch":{"xref_id":"0018569"}}}


id: PBO:0048489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 1","termid":"PBO:0048489"}


id: GO:1904824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an anaphase-promoting complex.","definition_xrefs":["PMID:16950791","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"anaphase-promoting complex assembly","synonyms":[{"name":"APC assembly","type":"broad"},{"name":"anaphase promoting complex assembly","type":"exact"},{"name":"anaphase promoting complex formation","type":"exact"},{"name":"anaphase-promoting complex formation","type":"exact"},{"name":"cyclosome assembly","type":"exact"},{"name":"cyclosome formation","type":"exact"}],"termid":"GO:1904824"}


id: PBO:0004573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine hydroxylase Sur2","termid":"PBO:0004573"}


id: PBO:0055680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase I","termid":"PBO:0055680"}


id: MONDO:0010115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thoracic dysplasia-hydrocephalus syndrome","secondary_identifiers":["MEDGEN:338562","MESH:C564774","GARD:5180","OMIM:273730","Orphanet:1861","UMLS:C1848864"],"synonyms":[{"name":"thoracic dysplasia hydrocephalus syndrome","type":"related"},{"name":"thoracic dysplasia-hydrocephalus syndrome","type":"exact"}],"termid":"MONDO:0010115","xrefs":{"Monarch":{"xref_id":"0010115"}}}


id: PBO:0064067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 101","termid":"PBO:0064067"}


id: MONDO:0013243
data:
  {"annotated_genes":["SJAG_03815","SJAG_02919","SJAG_04567"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85842,85843,85844],"is_not":false,"summary":null,"term":"MONDO:0013243"}]},"cv_name":"mondo","definition":"Any neuronopathy, distal hereditary motor in which the cause of the disease is a mutation in the HSPB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy type 2","termid":"MONDO:0015352"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 2C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3150619","OMIM:613376","DOID:0111209","GARD:18264","MEDGEN:461969"],"synonyms":[{"name":"HMN 2C","type":"related"},{"name":"HMN2C","type":"related"},{"name":"HSPB3 neuronopathy, distal hereditary motor","type":"exact"},{"name":"neuronopathy, distal hereditary motor caused by mutation in HSPB3","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type IIC","type":"related"},{"name":"neuropathy, distal hereditary motor, type 2C","type":"related"}],"termid":"MONDO:0013243","terms_by_termid":{"MONDO:0013243":null},"xrefs":{"Monarch":{"xref_id":"0013243"}}}


id: GO:0045680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of R8 cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R8 cell differentiation","termid":"GO:0045679"},{"relation_name":"is_a","term_name":"negative regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110118"},{"relation_name":"negatively_regulates","term_name":"R8 cell differentiation","termid":"GO:0045465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R8 cell differentiation","synonyms":[{"name":"down regulation of R8 differentiation","type":"exact"},{"name":"down-regulation of R8 differentiation","type":"exact"},{"name":"downregulation of R8 differentiation","type":"exact"},{"name":"inhibition of R8 differentiation","type":"narrow"},{"name":"negative regulation of R8 differentiation","type":"exact"}],"termid":"GO:0045680"}


id: PR:Q9UUD6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.04c","synonyms":[{"name":"Spom972h-ubp11","type":"exact"},{"name":"deubiquitinating enzyme 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUD6"}


id: GO:0019517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L- threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) to form the compound methylglyoxal, which is subsequently converted to D-lactate.","definition_xrefs":["GOC:bf","MetaCyc:THRDLCTCAT-PWY","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"threonine catabolic process","termid":"GO:0006567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-threonine catabolic process to D-lactate","synonyms":[{"name":"L-threonine breakdown to D-lactate","type":"exact"},{"name":"L-threonine catabolic process to (R)-lactate","type":"broad"},{"name":"L-threonine catabolic process to methylglyoxal","type":"exact"},{"name":"L-threonine catabolic process to pyruvate","type":"related"},{"name":"L-threonine catabolism to D-lactate","type":"exact"},{"name":"L-threonine degradation to D-lactate","type":"exact"},{"name":"threonine catabolic process to D-lactate","type":"broad"}],"termid":"GO:0019517"}


id: MONDO:0008110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ocular dominance (obsolete MONDO:0008110)","secondary_identifiers":["OMIM:164190"],"synonyms":[{"name":"ocular dominance","type":"exact"}],"termid":"MONDO:0008110","xrefs":{"Monarch":{"xref_id":"0008110"}}}


id: GO:0009217
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleoside triphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside triphosphate catabolic process","termid":"GO:0009146"},{"relation_name":"is_a","term_name":"deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009204"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine deoxyribonucleoside triphosphate breakdown","type":"exact"},{"name":"purine deoxyribonucleoside triphosphate catabolism","type":"exact"},{"name":"purine deoxyribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009217","terms_by_termid":{"GO:0035863":null}}


id: PBO:0081732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 663, pseudogene","termid":"PBO:0081732"}


id: GO:0016999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.","definition_xrefs":["GOC:cab2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibiotic metabolic process","synonyms":[{"name":"antibiotic metabolism","type":"exact"}],"termid":"GO:0016999"}


id: PBO:0091145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-mannosyltransferase II complex subunit Pga1","termid":"PBO:0091145"}


id: PBO:0077149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase like 2","termid":"PBO:0077149"}


id: PBO:0074132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 33 member 1","termid":"PBO:0074132"}


id: PBO:0078602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 15","termid":"PBO:0078602"}


id: PBO:0086951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of Cdc42p and Rho1p; regulates AMR closure through Hof1p; inhibits Cdc42-dependent Cla4 activation at the division site, to prevent budding in the old bud neck; recruits Nis1p and Nba1p to the division site with Nap1 and the Rax1p-Rax2p dependent inheritance of Nis1p and Nba1p to bud scars to prevent division site repolarization; keeps Rho1p at the division site after AMR contraction to control secondary septum formation; relocalizes from bud neck to cytoplasm upon replication stress","termid":"PBO:0086951"}


id: MONDO:0010068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disorder characterized by bone marrow failure, spinal abnormalities, saddle nose, and metaphysical striation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, sponastrime type","secondary_identifiers":["DOID:5684","NCIT:C129031","MESH:C535786","SCTID:389161008","MEDGEN:266247","UMLS:C1300260","OMIM:271510","ICD9:756.9","Orphanet:93357","GARD:4970"],"synonyms":[{"name":"Sponastrime dysplasia","type":"related"},{"name":"short limb dwarfism with saddle nose, spinal alterations, and metaphyseal striation","type":"related"},{"name":"short-limb dwarfism with saddle Nose, spinal alterations, and metaphyseal striation","type":"related"},{"name":"sponastrime dysplasia","type":"exact"},{"name":"spondylar and nasal alterations with striated metaphyses","type":"related"},{"name":"spondylar and nasal alterations-striated metaphyses syndrome","type":"exact"},{"name":"spondylar and nasal changes with striations of the metaphyses (SPONASTRIME) dysplasia","type":"exact"},{"name":"spondylar and nasal changes with triations of the metaphyses (SPONASTRIME) dysplasia","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia Sponastrime type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Sponastrime type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, sponastrime type","type":"exact"}],"termid":"MONDO:0010068","xrefs":{"Monarch":{"xref_id":"0010068"}}}


id: PR:Q9P776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1711.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1711.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.15c","synonyms":[{"name":"Spom972h-SPBC1711.15c","type":"exact"}],"termid":"PR:Q9P776"}


id: MONDO:0100553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any open angle glaucoma in which the cause of the disease is a mutation in the OPTN gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"open-angle glaucoma","termid":"MONDO:0005338"},{"relation_name":"is_a","term_name":"hereditary glaucoma","termid":"MONDO:0018174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"OPTN-related open angle glaucoma","secondary_identifiers":["MEDGEN:87389","UMLS:C0339573","OMIM:137760"],"synonyms":[{"name":"OPTN-related open angle glaucoma","type":"exact"},{"name":"glaucoma 1, open angle, E","type":"exact"}],"termid":"MONDO:0100553","xrefs":{"Monarch":{"xref_id":"0100553"}}}


id: PBO:0082503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase zeta; involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair; may be involved in meiosis; forms a complex with Rev7p, Pol31p and Pol32p","termid":"PBO:0082503"}


id: GO:0006280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which genetic material undergoes a detectable and heritable structural change. There are three categories of mutation: genome mutations, involving addition or subtraction of one or more whole chromosomes; chromosome mutations, which alter the structure of chromosomes; and gene mutations, where the structure of a gene is altered at the molecular level.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete mutagenesis (obsolete GO:0006280)","synonyms":[{"name":"mutagenesis","type":"exact"}],"termid":"GO:0006280"}


id: PBO:0088171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xanthine-guanine phosphoribosyl transferase; required for xanthine utilization and for optimal utilization of guanine","termid":"PBO:0088171"}


id: PBO:0028729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylcysteine_sulfoxide_level","termid":"PBO:0028729"}


id: GO:1905009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-lysine import into cell.","definition_xrefs":["GOC:TermGenie","PMID:7499219","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-lysine import across plasma membrane","termid":"GO:1905008"},{"relation_name":"negatively_regulates","term_name":"L-lysine import across plasma membrane","termid":"GO:0097639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-lysine import across plasma membrane","secondary_identifiers":["GO:0010806"],"synonyms":[{"name":"down regulation of L-lysine import into cell","type":"exact"},{"name":"down-regulation of L-lysine import into cell","type":"exact"},{"name":"downregulation of L-lysine import into cell","type":"exact"},{"name":"inhibition of L-lysine import into cell","type":"narrow"},{"name":"negative regulation of L-lysine import into cell","type":"exact"},{"name":"negative regulation of lysine import","type":"broad"},{"name":"negative regulation of lysine uptake","type":"exact"}],"termid":"GO:1905009"}


id: GO:0010308
data:
  {"annotated_genes":["SJAG_00309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111875],"is_not":false,"summary":null,"term":"GO:0010308"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + O2 = 3-(methylthio)propanoate + CO + formate.","definition_xrefs":["RHEA:14161","EC:1.13.11.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acireductone dioxygenase (Ni2+-requiring) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:R146-RXN","KEGG_REACTION:R07363"],"synonyms":[{"name":"1,2-dihydroxy-5-(methylthio)pent-1-en-3-one:oxygen oxidoreductase (formate- and CO-forming)","type":"related"},{"name":"2-hydroxy-3-keto-5-thiomethylpent-1-ene dioxygenase activity","type":"broad"},{"name":"ARD activity","type":"related"},{"name":"E-2 activity","type":"related"},{"name":"acireductone dioxygenase activity","type":"broad"}],"termid":"GO:0010308","terms_by_termid":{"GO:0010308":null}}


id: RO:0003304
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some contributing role that influences the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_condition","termid":"RO:0003304"}


id: MONDO:0004027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete embryonal cancer (obsolete MONDO:0004027)","termid":"MONDO:0004027","xrefs":{"Monarch":{"xref_id":"0004027"}}}


id: PBO:0084874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; MRP1 exhibits genetic interactions with PET122, encoding a COX3-specific translational activator, and with PET123, encoding a small subunit mitochondrial ribosomal protein","termid":"PBO:0084874"}


id: PBO:0043432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNIH3 antisense RNA 1","termid":"PBO:0043432"}


id: PR:Q9UT52
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mod21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-tubulin complex subunit mod21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.08c","synonyms":[{"name":"Spom972h-mod21","type":"exact"}],"termid":"PR:Q9UT52"}


id: GO:0031813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y2 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"P2Y2 nucleotide receptor binding","synonyms":[{"name":"P2Y2 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031813"}


id: PBO:0034724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAMP/MTREC complex subunit, ATP-dependent RNA helicase (predicted)","termid":"PBO:0034724"}


id: GO:0010972
data:
  {"annotated_genes":["SJAG_04332","SJAG_02576","SJAG_01680","SJAG_01873","SJAG_00640","SJAG_00526","SJAG_01205","SJAG_03073","SJAG_03602","SJAG_02723","SJAG_05373","SJAG_01146","SJAG_03695","SJAG_01605","SJAG_00082","SJAG_03942","SJAG_03160","SJAG_02858","SJAG_04671","SJAG_01010","SJAG_00600","SJAG_04287","SJAG_03067","SJAG_02266","SJAG_01118","SJAG_01429","SJAG_04394","SJAG_02592","SJAG_03026","SJAG_02563","SJAG_04280","SJAG_02392","SJAG_01076","SJAG_01855","SJAG_02332","SJAG_02074","SJAG_03854","SJAG_06592","SJAG_01084","SJAG_01044","SJAG_00318","SJAG_03927","SJAG_04597","SJAG_00364","SJAG_02098","SJAG_02771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89506,92430,92718,93067,93874,95356,100488,103982,106116,106479,108032,110886,111014,111271,111923,113704,113913,115451],"is_not":false,"summary":null,"term":"GO:0010972"},{"annotations":[100925,115448,100027,89505,93914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[92035,116716,102805,111484,98691,116246,88632,90941,116547,98857,106084,108774,100028,93466,115505,107301,93445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[95354,97934,94045,115450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[90942,88633,100029,88062,89724,106085,108775,91302,93446,111180,100543,113703,98859,116461,117152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010389"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle G2/M phase transition","termid":"GO:1902750"},{"relation_name":"negatively_regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03160":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044772","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of G2/M transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of mitotic entry","type":"exact"}],"termid":"GO:0010972","terms_by_termid":{"GO:0007095":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0044878":null}}


id: PBO:0091393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal multispanning membrane protein","termid":"PBO:0091393"}


id: MONDO:0018414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete female infertility due to an implantation defect of genetic origin (obsolete MONDO:0018414)","secondary_identifiers":["ICD10CM:N97.2","Orphanet:400025"],"termid":"MONDO:0018414","xrefs":{"Monarch":{"xref_id":"0018414"}}}


id: PBO:0018102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NiCoT heavy metal ion transmembrane transporter Nic1","termid":"PBO:0018102"}


id: PBO:0081268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33B pseudogene 1","termid":"PBO:0081268"}


id: PBO:0068977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 221, pseudogene","termid":"PBO:0068977"}


id: PBO:0089046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug130","termid":"PBO:0089046"}


id: GO:0140211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: folic acid(out) + H+(out) = folic acid(in) + H+(in). The main folic acid symporter is the Proton-Coupled Folate Transporter (PCFT/SLC46A1), which has similar affinity for transport of reduced folates (5-methyl THF, 5-formyl THF) and folic acid.","definition_xrefs":["PMID:24745983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"folic acid:proton symporter activity","secondary_identifiers":["TC:2.A.1.50.1"],"termid":"GO:0140211"}


id: PBO:0081748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 678","termid":"PBO:0081748"}


id: GO:0030290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any of a group of peptide cofactors of enzymes for the lysosomal degradation of sphingolipids. They stimulate various enzymes, including glucosylceramidase, galactosylceramidase, cerebroside-sulfatase, alpha-galactosidase, beta-galactosidase, and sphingomyelin phosphodiesterase.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"sphingolipid activator protein activity","secondary_identifiers":["Reactome:R-HSA-9840470","Reactome:R-HSA-1605717"],"synonyms":[{"name":"saposin","type":"narrow"}],"termid":"GO:0030290"}


id: PBO:0048971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 2, mitochondrial","termid":"PBO:0048971"}


id: PBO:0079485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXN2 pseudogene 1","termid":"PBO:0079485"}


id: PBO:0086385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative boron transporter involved in boron efflux and resistance; overexpression mutant but not null mutant displays boron tolerance phenotype; identified as a heat-induced gene in a high-throughout screen; YMR279C is not an essential gene; YMR279C has a paralog, ATR1, that arose from the whole genome duplication","termid":"PBO:0086385"}


id: PBO:0043947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta A2","termid":"PBO:0043947"}


id: PBO:0014620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name deriviation, Calmodulin-dependent Kinase Kinase","termid":"PBO:0014620"}


id: PBO:0016925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu32","termid":"PBO:0016925"}


id: PBO:0016935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSchizosaccharomyces pombe specific protein Mug114","termid":"PBO:0016935"}


id: GO:0090717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by reactivated memory T cells and B cells and directed against a previously encountered antigen, being quicker and quantitatively better compared with the primary response.","definition_xrefs":["PMID:26831526","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"adaptive immune memory response","termid":"GO:0090716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune memory response involving T cells and B cells","termid":"GO:0090717"}


id: PBO:0072294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 12","termid":"PBO:0072294"}


id: MONDO:0009002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma","termid":"MONDO:0001476"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma, ocular, autosomal recessive","secondary_identifiers":["UMLS:C4011974","OMIM:216820","MEDGEN:860411"],"synonyms":[{"name":"coloboma, ocular, autosomal recessive","type":"exact"}],"termid":"MONDO:0009002","xrefs":{"Monarch":{"xref_id":"0009002"}}}


id: PR:P87060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pop1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein pop1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.01","synonyms":[{"name":"Spom972h-pop1","type":"exact"},{"name":"WD repeat-containing protein ste16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87060"}


id: PBO:0047693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR heme transporter 1","termid":"PBO:0047693"}


id: GO:0048382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesendoderm over time, from its formation to the mature structure. In animal embryos, mesendoderm development gives rise to both mesoderm and endoderm tissues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"endoderm development","termid":"GO:0007492"},{"relation_name":"part_of","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesendoderm development","termid":"GO:0048382"}


id: FYPO:0007931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to egtazic acid. Cells stop growing (and may die) at a concentration of egtazic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to egtazic acid","termid":"FYPO:0007931"}


id: GO:0035746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granzyme A due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"granzyme A production","termid":"GO:0035746"}


id: MONDO:0015007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia, intellectual disability, nystagmus, and obesity","secondary_identifiers":["GARD:17957","MEDGEN:924883","OMIM:617296","UMLS:C4284592","Orphanet:521390"],"synonyms":[{"name":"SINO","type":"related"},{"name":"spastic paraplegia, intellectual disability, nystagmus, and obesity","type":"exact"}],"termid":"MONDO:0015007","xrefs":{"Monarch":{"xref_id":"0015007"}}}


id: PBO:0064292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen receptor with a C-terminal lysine","termid":"PBO:0064292"}


id: PBO:0074788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 9","termid":"PBO:0074788"}


id: PBO:0044738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 6","termid":"PBO:0044738"}


id: PBO:0059091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC family CW-type zinc finger 3","termid":"PBO:0059091"}


id: PBO:0034636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_kinetochore_during_vegetative_growth","termid":"PBO:0034636"}


id: GO:0052543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, the cell wall. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall thickening","termid":"GO:0052386"},{"relation_name":"is_a","term_name":"callose localization","termid":"GO:0052545"},{"relation_name":"is_a","term_name":"cellular macromolecule localization","termid":"GO:0070727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0071554","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"callose deposition in cell wall","synonyms":[{"name":"callose localization in cell wall","type":"exact"},{"name":"cell wall callose deposition","type":"exact"},{"name":"cell wall callose localization","type":"exact"}],"termid":"GO:0052543"}


