# terms

id: GO:0016914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A gonadotrophic glycoprotein hormone secreted, in mammals, by the anterior pituitary gland; consists of alpha and beta subunits, the latter of which confers hormonal specificity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gonadotropin complex","termid":"GO:0061696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"follicle-stimulating hormone complex","synonyms":[{"name":"FSH complex","type":"exact"},{"name":"follicle stimulating hormone complex","type":"exact"}],"termid":"GO:0016914"}


id: GO:0045016
data:
  {"annotated_genes":["SJAG_02484","SJAG_01639"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106781],"is_not":false,"summary":null,"term":"GO:0045016"},{"annotations":[114076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"}]},"cv_name":"biological_process","definition":"The process in which a magnesium ion (Mg2+) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:ai","PMID:11254124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnesium ion transmembrane transport","termid":"GO:1903830"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01639":null,"SJAG_02484":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrial magnesium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990614"],"synonyms":[{"name":"mitochondrial magnesium ion transport","type":"related"}],"termid":"GO:0045016","terms_by_termid":{"GO:0045016":null,"GO:1990616":null}}


id: MOD:00568
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 245 is redundant with Unimod 349. Remap to MOD:00776","definition_xrefs":["PubMed:6692818","PubMed:1097438","PubMed:4399050","PubMed:9521123","PubMed:9582379","Unimod:245","PubMed:5764436","PubMed:339692","PubMed:8089117"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00568 histidine oxidation to aspartic acid (obsolete MOD:00568)","termid":"MOD:00568"}


id: MONDO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant tumor involving the lymph node. Lymphomas and metastatic carcinomas are representative examples. -- 2004","definition_xrefs":["NCIT:C35812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system cancer","termid":"MONDO:0000612"},{"relation_name":"is_a","term_name":"lymph node neoplasm","termid":"MONDO:0024339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"lymph node cancer","secondary_identifiers":["ICD9:239.89","SCTID:127232002","DOID:10619","MEDGEN:182690","UMLS:C0948627"],"synonyms":[{"name":"cancer of lymph node","type":"exact"},{"name":"lymph node cancer","type":"exact"},{"name":"lymph node neoplasm","type":"broad"},{"name":"malignant lymph node neoplasm","type":"exact"},{"name":"malignant neoplasm of lymph node","type":"exact"}],"termid":"MONDO:0001082","xrefs":{"Monarch":{"xref_id":"0001082"}}}


id: MOD:01860
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine bacillithiol disulfide.","definition_xrefs":["ChEBI:61338","PubMed:19578333","RESID:AA0563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine bacillithiol disulfide","synonyms":[{"name":"(2S)-(2-[S-(L-cystein-S-yl)-L-cysteinyl]amino-2-deoxy-alpha-D-glucopyranosyloxy)-butanedioic acid","type":"exact"},{"name":"BSH","type":"exact"},{"name":"L-cysteine bacillithiol disulfide","type":"exact"},{"name":"MOD_RES S-bacillithiol cysteine disulfide","type":"exact"}],"termid":"MOD:01860"}


id: PBO:0017001
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eighteen Interacting Centromere protein","termid":"PBO:0017001"}


id: FYPO:0003367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize pyridoxine, and therefore requires pyridoxine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for pyridoxine","synonyms":[{"name":"growth auxotrophic for pyridoxine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for pyridoxine during vegetative growth","type":"exact"},{"name":"pyridoxine auxotrophy","type":"exact"}],"termid":"FYPO:0003367"}


id: PBO:0048747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1B","termid":"PBO:0048747"}


id: PBO:0069265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 521, pseudogene","termid":"PBO:0069265"}


id: MONDO:0017786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"2q23.1 microduplication syndrome is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome 2, primarily characterized by global developmental delay, hypotonia, autistic-like features and behavioral problems. Craniofacial dysmorphism (arched eyebrows, hypertelorism, bilateral ptosis, prominent nose, wide mouth, micro/retrognathia) and an affable personality are also commonly associated. Minor digital anomalies (fifth finger clinodactyly and large, broad first toe) have occasionally been reported.","definition_xrefs":["Orphanet:313947"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 2","termid":"MONDO:0016953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2q23.1 microduplication syndrome","secondary_identifiers":["MEDGEN:1647644","GARD:21363","SCTID:766816008","UMLS:C4707847"],"synonyms":[{"name":"dup(2)(q23.1)","type":"exact"},{"name":"trisomy 2q23.1","type":"exact"}],"termid":"MONDO:0017786","xrefs":{"Monarch":{"xref_id":"0017786"}}}


id: PBO:0004574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter (predicted)","termid":"PBO:0004574"}


id: PBO:0059552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Ser (AGU/C) 2","termid":"PBO:0059552"}


id: PBO:0061855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin family member 5, pseudogene","termid":"PBO:0061855"}


id: FYPO:0003695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer free small ribosomal subunits in the cytosol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cytosolic small ribosomal subunit level","synonyms":[{"name":"cytosolic small ribosomal subunit present at decreased level","type":"exact"},{"name":"decreased 40S ribosomal subunit level","type":"exact"},{"name":"decreased cytosolic small ribosomal subunit level during mitotic cell cycle","type":"related"},{"name":"decreased cytosolic small ribosomal subunit level during vegetative growth","type":"exact"},{"name":"decreased level of cytosolic small ribosomal subunits","type":"related"},{"name":"decreased small ribosomal subunit level","type":"broad"},{"name":"reduced cytosolic small ribosomal subunit level","type":"exact"}],"termid":"FYPO:0003695"}


id: PR:Q9Y7R5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An insulin-induced gene 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSIG family protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.05c","secondary_identifiers":["UniProtKB:Q9Y7R5"],"synonyms":[{"name":"SPCC306.05c","type":"related"},{"name":"Spom972h-INSIG1","type":"exact"}],"termid":"PR:Q9Y7R5"}


id: MONDO:0011985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Hyper IgM syndrome which is a defect in class switch recombination downstream of the AICDA gene that does not impair somatic hypermutation.","definition_xrefs":["Wikipedia:Hyper-IgM_syndrome_type_4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgM syndrome","termid":"MONDO:0003947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hyper-IgM syndrome type 4","secondary_identifiers":["GARD:10580","MESH:C564277","OMIM:608184","Orphanet:101091","DOID:0060760","MEDGEN:330847","UMLS:C1842413"],"synonyms":[{"name":"HIGM4","type":"exact"},{"name":"hyper IgM syndrome 4","type":"related"},{"name":"hyper-IgM syndrome 4","type":"related"},{"name":"hyper-IgM syndrome type 4","type":"exact"},{"name":"immunodeficiency with hyper IgM type 4","type":"related"},{"name":"immunodeficiency with hyper-IgM type 4","type":"related"},{"name":"immunodeficiency with hyper-IgM, type 4","type":"related"}],"termid":"MONDO:0011985","xrefs":{"Monarch":{"xref_id":"0011985"}}}


id: GO:0005107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI-linked ephrin (obsolete GO:0005107)","synonyms":[{"name":"GPI-linked ephrin","type":"exact"}],"termid":"GO:0005107"}


id: PBO:0004820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-C","termid":"PBO:0004820"}


id: PBO:0047114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 162 member A","termid":"PBO:0047114"}


id: MOD:00511
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, HexNAc(2)","definition_xrefs":["PubMed:111247","PubMed:1694179","RESID:AA0151#var","Unimod:143","PubMed:5490222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(2)","type":"related"},{"name":"HexNAc2","type":"related"}],"termid":"MOD:00511"}


id: GO:0046765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral budding that starts with formation of a membrane curvature in the host nuclear membrane.","definition_xrefs":["ISBN:0072370319","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"},{"relation_name":"part_of","term_name":"exit of virus from host cell nucleus by nuclear egress","termid":"GO:0046802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from nuclear membrane","secondary_identifiers":["GO:0046749"],"synonyms":[{"name":"nuclear membrane viral budding","type":"exact"},{"name":"nuclear membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from nuclear membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from nuclear membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from nuclear membrane","type":"exact"},{"name":"virus budding from nuclear membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from nuclear membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046765"}


id: PBO:0003184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine aminotransferase (predicted)","termid":"PBO:0003184"}


id: PR:Q09837
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00306","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.12c","secondary_identifiers":["UniProtKB:Q09837"],"synonyms":[{"name":"GPI mannosyltransferase IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGZ","type":"exact"}],"termid":"PR:Q09837"}


id: PBO:0056192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A4","termid":"PBO:0056192"}


id: GO:2000138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000136"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000138"}


id: SO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes a change in post translational processing of the peptide with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_function_variant","termid":"SO:0001554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_post_translational_processing_variant","synonyms":[{"name":"polypeptide post translational processing variant","type":"exact"}],"termid":"SO:0001562"}


id: FYECO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using carbendazim (MBC) and subsequently released from the block.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBC block and release","termid":"FYECO:0000365"}


id: MONDO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Caroli disease (obsolete MONDO:0000506)","termid":"MONDO:0000506","xrefs":{"Monarch":{"xref_id":"0000506"}}}


id: GO:0097068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroxine stimulus.","definition_xrefs":["PMID:9916872","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to thyroid hormone","termid":"GO:0097066"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"},{"relation_name":"is_a","term_name":"response to L-phenylalanine derivative","termid":"GO:1904386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to thyroxine","synonyms":[{"name":"response to T4","type":"exact"},{"name":"response to T4 stimulus","type":"exact"},{"name":"response to thyroxine stimulus","type":"exact"}],"termid":"GO:0097068"}


id: PBO:0086913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Y' element ATP-dependent helicase; YLL066C is not an essential gene","termid":"PBO:0086913"}


id: GO:0015894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of acriflavine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acriflavine is a fluorescent dye used as a local antiseptic and also as a biological stain. It intercalates into nucleic acids thereby inhibiting bacterial and viral replication.","definition_xrefs":["GOC:curators","PubChem_Compound:6842"],"gene_count":0,"genotype_count":0,"name":"obsolete acriflavine transport (obsolete GO:0015894)","synonyms":[{"name":"acriflavin transport","type":"related"}],"termid":"GO:0015894"}


id: GO:0060328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based movement by which cytoplasmic actin filaments slide past one another resulting in a contraction that propels the cell in the direction that has been defined as the front of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic actin-based contraction involved in forward cell motility","synonyms":[{"name":"cytoplasmic actin-based contraction involved in forward cell locomotion","type":"related"}],"termid":"GO:0060328"}


id: GO:2000617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K9 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K9 acetylation (obsolete GO:2000617)","synonyms":[{"name":"positive regulation of histone H3 acetylation at K9","type":"exact"},{"name":"positive regulation of histone H3K9 acetylation","type":"exact"}],"termid":"GO:2000617"}


id: MONDO:0002852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare sarcoma that arises from the mediastinum. Examples include liposarcoma, leiomyosarcoma, and angiosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"},{"relation_name":"is_a","term_name":"mediastinal soft tissue cancer","termid":"MONDO:0037743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinum sarcoma","secondary_identifiers":["MEDGEN:233687","DOID:4050","NCIT:C6606","UMLS:C1334678"],"synonyms":[{"name":"mediastinal sarcoma","type":"exact"},{"name":"mediastinum sarcoma","type":"exact"},{"name":"sarcoma of mediastinum","type":"exact"},{"name":"sarcoma of the mediastinum","type":"exact"}],"termid":"MONDO:0002852","xrefs":{"Monarch":{"xref_id":"0002852"}}}


id: PR:O60167
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yap18 gene.","definition_xrefs":["UniProtKB:O60167","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH domain-containing protein C19F8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.03c","synonyms":[{"name":"Spom972h-yap18","type":"exact"}],"termid":"PR:O60167"}


id: PBO:0031276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_G0_to_G1_transition","termid":"PBO:0031276"}


id: MONDO:0011439
data:
  {"annotated_genes":["SJAG_00526"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84775],"is_not":false,"summary":null,"term":"MONDO:0011439"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia type 12 (SCA12) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by the presence of action tremor associated with relatively mild cerebellar ataxia. Associated pyramidal and extrapyramidal signs and dementia have been reported.","definition_xrefs":["Orphanet:98762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00526":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:604326","GARD:10476","MEDGEN:347653","NCIT:C154316","MESH:C565790","UMLS:C1858501","DOID:0050962","SCTID:719208005","icd11.foundation:1210063722"],"synonyms":[{"name":"SCA12","type":"exact"},{"name":"spinocerebellar ataxia 12","type":"related"},{"name":"spinocerebellar ataxia type 12","type":"exact"}],"termid":"MONDO:0011439","terms_by_termid":{"MONDO:0011439":null},"xrefs":{"Monarch":{"xref_id":"0011439"}}}


id: PBO:0043212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 5","termid":"PBO:0043212"}


id: GO:0019992
data:
  {"annotated_genes":["SJAG_04479","SJAG_03488"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102233,115947],"is_not":false,"summary":null,"term":"GO:0019992"}]},"cv_name":"molecular_function","definition":"Binding to a diacylglycerol, a diester of glycerol and two fatty acids.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03488":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"diacylglycerol binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-400015"],"termid":"GO:0019992","terms_by_termid":{"GO:0019992":null}}


id: PBO:0003749
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.50","termid":"PBO:0003749"}


id: PBO:0070089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 3 pseudogene","termid":"PBO:0070089"}


id: GO:0000455
data:
  {"annotated_genes":["SJAG_01172","SJAG_03755","SJAG_03572"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90717,91786,105697],"is_not":false,"summary":null,"term":"GO:0000455"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine during ribosome biogenesis where the enzyme specifies the site that becomes pseudouridylated without using a guide RNA.","definition_xrefs":["ISBN:1555811337","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthesis","termid":"GO:0031118"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01172":null,"SJAG_03572":null,"SJAG_03755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"enzyme-directed rRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000455","terms_by_termid":{"GO:0000455":null}}


id: GO:0061300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the cerebellum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum vasculature development","termid":"GO:0061300"}


id: PBO:0054782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2195","termid":"PBO:0054782"}


id: GO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the nucleus during interphase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear interphase chromosome (obsolete GO:0000232)","synonyms":[{"name":"nuclear interphase chromosome","type":"exact"}],"termid":"GO:0000232"}


id: PBO:0057077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR155 host gene","termid":"PBO:0057077"}


id: GO:0010196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which excess light energy absorbed by chlorophyll and not used to drive photosynthesis is emitted as heat. This process helps maintain the balance between dissipation and utilization of light energy to minimize generation of oxidizing molecules, thereby protecting the plant against photo-oxidative damage.","definition_xrefs":["PMID:10938857","PMID:10667783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy quenching","termid":"GO:1990066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonphotochemical quenching","termid":"GO:0010196"}


id: PR:O94474
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tetratricopeptide repeat protein 37 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04988","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superkiller protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.05","secondary_identifiers":["UniProtKB:O94474"],"synonyms":[{"name":"Spom972h-TTC37","type":"exact"}],"termid":"PR:O94474"}


id: MONDO:1011176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis, non-human animal","termid":"MONDO:1010299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrosis, cattle","secondary_identifiers":["OMIA:000750-9913"],"termid":"MONDO:1011176","xrefs":{"Monarch":{"xref_id":"1011176"}}}


id: PBO:0061426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NQO2 antisense RNA 1","termid":"PBO:0061426"}


id: GO:0033816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2,4-diaminobutyrate + acetyl-CoA = N(4)-acetyl-L-2,4-diaminobutyrate + CoA + H+.","definition_xrefs":["EC:2.3.1.178","RHEA:16901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diaminobutyrate acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06978","MetaCyc:R102-RXN"],"synonyms":[{"name":"2,4-diaminobutanoate acetyltransferase activity","type":"related"},{"name":"DAB acetyltransferase activity","type":"related"},{"name":"DABA acetyltransferase activity","type":"related"},{"name":"DABAcT","type":"related"},{"name":"EctA","type":"related"},{"name":"L-2,4-diaminobutanoate acetyltransferase activity","type":"related"},{"name":"L-2,4-diaminobutyrate acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-2,4-diaminobutanoate 4-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-2,4-diaminobutanoate N4-acetyltransferase activity","type":"related"},{"name":"diaminobutyric acid acetyltransferase activity","type":"related"}],"termid":"GO:0033816"}


id: GO:1905070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an anterior visceral endoderm cell from one site to another.","definition_xrefs":["GO_REF:0000091","GOC:TermGenie","PMID:17078044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior visceral endoderm cell migration","termid":"GO:1905070"}


id: GO:0061433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of caloric restriction, insufficient food energy intake.","definition_xrefs":["GOC:dph","PMID:17914901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"response to caloric restriction","termid":"GO:0061771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to caloric restriction","termid":"GO:0061433"}


id: GO:0101030
data:
  {"annotated_genes":["SJAG_02179","SJAG_00683","SJAG_01781","SJAG_06284"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89191,95298,98093,98094],"is_not":false,"summary":null,"term":"GO:0101030"}]},"cv_name":"biological_process","definition":"The modification of a tRNA anticodon loop by replacing guanine with queuonine. Reaction is tRNA guanine + queuine = tRNA queuine + guanine.","definition_xrefs":["PMID:24911101","GOC:PomBase","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00683":null,"SJAG_01781":null,"SJAG_02179":null,"SJAG_06284":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA-guanine transglycosylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0101030","terms_by_termid":{"GO:0101030":null}}


id: PBO:0058986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT10 histone lysine methyltransferase DOT1L cofactor","termid":"PBO:0058986"}


id: PBO:0069787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1073, pseudogene","termid":"PBO:0069787"}


id: PBO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.16","termid":"PBO:0001762"}


id: MONDO:0004755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of ruminants with tapeworms of the genus Moniezia.","definition_xrefs":["MESH:D008989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monieziasis","secondary_identifiers":["DOID:931","MEDGEN:6424","UMLS:C0026414"],"termid":"MONDO:0004755","xrefs":{"Monarch":{"xref_id":"0004755"}}}


id: PBO:0054327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1720","termid":"PBO:0054327"}


id: MONDO:0017067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cervicothoracic spina bifida aperta","secondary_identifiers":["UMLS:C5439433","GARD:20956","icd11.foundation:572666703","MEDGEN:1770642","Orphanet:268397"],"termid":"MONDO:0017067","xrefs":{"Monarch":{"xref_id":"0017067"}}}


id: GO:0031092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the platelet alpha granule.","definition_xrefs":["GOC:mah","PMID:8467233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"platelet alpha granule","termid":"GO:0031091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"platelet alpha granule membrane","synonyms":[{"name":"platelet alpha-granule membrane","type":"exact"}],"termid":"GO:0031092"}


id: GO:0051664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which nuclear pores are transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nuclear pore localization","secondary_identifiers":["GO:0031081"],"synonyms":[{"name":"establishment and maintenance of nuclear pore localization","type":"exact"},{"name":"nuclear pore distribution","type":"related"},{"name":"nuclear pore localisation","type":"exact"},{"name":"positioning of nuclear pores","type":"related"}],"termid":"GO:0051664"}


id: PBO:0059297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L46","termid":"PBO:0059297"}


id: PBO:0045501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoglein 4","termid":"PBO:0045501"}


id: MONDO:0003302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurofibroma with epithelioid morphology.","definition_xrefs":["NCIT:C6558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid neurofibroma","secondary_identifiers":["MEDGEN:226902","UMLS:C1275264","ICD9:215.9","SCTID:404032008","DOID:5149"],"synonyms":[{"name":"epithelioid neurofibroma","type":"exact"}],"termid":"MONDO:0003302","xrefs":{"Monarch":{"xref_id":"0003302"}}}


id: MONDO:0002688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blockage of the normal flow of stomach contents through the duodenum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenal disorder","termid":"MONDO:0002866"},{"relation_name":"is_a","term_name":"intestinal obstruction","termid":"MONDO:0004565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal obstruction","secondary_identifiers":["UMLS:C0013292","SCTID:95532008","DOID:3558","MEDGEN:4417","MESH:D004380"],"termid":"MONDO:0002688","xrefs":{"Monarch":{"xref_id":"0002688"}}}


id: GO:0043848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the incision of damaged DNA on the 3' side of a lesion, typically at the ninth phosphodiester bond 3' of the damage.","definition_xrefs":["PMID:11818552"],"gene_count":0,"genotype_count":0,"name":"obsolete excinuclease cho activity (obsolete GO:0043848)","synonyms":[{"name":"cho","type":"related"},{"name":"endonuclease cho","type":"exact"},{"name":"uvrc homolog protein","type":"related"}],"termid":"GO:0043848"}


id: MONDO:0003165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign and malignant neoplasms of the cerebellum that arise from astrocytes. During childhood the majority are benign pilocytic astrocytomas. In adults both benign and relatively higher grade forms may occur. The most common presenting symptoms are headache, nausea, vomiting, ataxia of gait or limb, paresis, diplopia, and dizziness. Objective signs include weakness, long tract signs, dysmetria, gait ataxia, papilledema, and nystagmus. Surgical resection is often curative.","definition_xrefs":["NCIT:C9475"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"cerebellar neoplasm","termid":"MONDO:0002913"},{"relation_name":"is_a","term_name":"brain astrocytoma","termid":"MONDO:0021631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar astrocytoma","secondary_identifiers":["DOID:4848","UMLS:C0740480","MEDGEN:196631"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of cerebellum","type":"exact"},{"name":"astrocytoma of cerebellum","type":"exact"},{"name":"astrocytoma of the cerebellum","type":"exact"},{"name":"astrocytoma, cerebellar","type":"exact"},{"name":"cerebellar astrocytoma","type":"exact"},{"name":"cerebellum astrocytoma","type":"exact"},{"name":"cerebellum astrocytoma (excluding glioblastoma)","type":"exact"}],"termid":"MONDO:0003165","xrefs":{"Monarch":{"xref_id":"0003165"}}}


id: PBO:0017749
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 3'-5' exonuclease-to-polymerase ratio is about 1:30","termid":"PBO:0017749"}


id: PBO:0053211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 9","termid":"PBO:0053211"}


id: GO:0000949
data:
  {"annotated_genes":["SJAG_02734","SJAG_03743","SJAG_04842"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88020,96763,96764],"is_not":false,"summary":null,"term":"GO:0000949"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of aromatic amino acids to produce aromatic alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When an aromatic family amino acid, phenylalanine, tyrosine, or tryptophan, is used as the substrate, 2-phenylethanol, 4-hydroxyphenylethanol, or tryptophol, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to alcohol via Ehrlich pathway","termid":"GO:0000947"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02734":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process to alcohol via Ehrlich pathway","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000949","terms_by_termid":{"GO:0000949":null}}


id: PBO:0065556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 2","termid":"PBO:0065556"}


id: MOD:00932
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:11821862","Unimod:499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"IDBEST tag for quantitation","synonyms":[{"name":"Heavy IDBEST tag for quantitation","type":"related"},{"name":"IGBP:13C(2)","type":"related"}],"termid":"MOD:00932"}


id: PR:P87304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acyl-coenzyme A thioesterase 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase C31F10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.02","secondary_identifiers":["UniProtKB:P87304"],"synonyms":[{"name":"Spom972h-ACOT13","type":"exact"}],"termid":"PR:P87304"}


id: MONDO:0004024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastoma that affects the spinal cord.","definition_xrefs":["NCIT:C5155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0000640"},{"relation_name":"is_a","term_name":"extracranial neuroblastoma","termid":"MONDO:0002749"},{"relation_name":"is_a","term_name":"spinal cord cancer","termid":"MONDO:0003544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spinal cord neuroblastoma","secondary_identifiers":["DOID:6871","MEDGEN:234803","UMLS:C1336046"],"synonyms":[{"name":"neuroblastoma of spinal cord","type":"exact"},{"name":"neuroblastoma of the spinal cord","type":"exact"},{"name":"spinal cord neuroblastoma","type":"exact"}],"termid":"MONDO:0004024","xrefs":{"Monarch":{"xref_id":"0004024"}}}


id: MONDO:0004944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the brain or spinal cord by Treponema pallidum. It occurs many years following the original infection which remained untreated. Signs and symptoms include abnormal gait, blindness, depression, paralysis, seizures and dementia.","definition_xrefs":["NCIT:C84935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tertiary syphilis","termid":"MONDO:0004497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurosyphilis","secondary_identifiers":["UMLS:C0027927","ICD9:094","ICD10CM:A52.3","GARD:8729","MESH:D009494","ICD9:094.9","MEDGEN:14360","ICD9:094.89","icd11.foundation:2118246468","DOID:9988","SCTID:26039008"],"synonyms":[{"name":"late neurosyphilis","type":"exact"},{"name":"neurosyphilis","type":"exact"},{"name":"tertiary neurosyphilis","type":"exact"}],"termid":"MONDO:0004944","xrefs":{"Monarch":{"xref_id":"0004944"}}}


id: PBO:0040214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 2","termid":"PBO:0040214"}


id: PBO:0074426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 26","termid":"PBO:0074426"}


id: GO:0072146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a distal convoluted tubule cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"DCT cell differentiation","termid":"GO:0072069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DCT cell fate commitment","synonyms":[{"name":"distal convoluted tubule cell fate commitment","type":"exact"}],"termid":"GO:0072146"}


id: FYPO:0000711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but its occurrence is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to nitrogen starvation","termid":"FYPO:0000710"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"decreased cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"decreased mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"decreased mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"decreased nitrogen deprivation-induced G1 arrest","type":"exact"},{"name":"reduced cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0000711"}


id: PBO:0062087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 18 pseudogene","termid":"PBO:0062087"}


id: PBO:0064937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic polypeptide","termid":"PBO:0064937"}


id: FYPO:0006644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased, and some of the protein is present along the entire length of the spindle, during anaphase B of mitosis.","definition_xrefs":["PMID:28178520","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle midzone during anaphase B","termid":"FYPO:0004833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone, with protein distributed along spindle, during anaphase B","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone, with protein distributed along spindle, during anaphase B","type":"exact"},{"name":"decreased protein localization to mitotic spindle midzone, with protein distributed along spindle, during anaphase B during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle midzone, with protein distributed along spindle, during anaphase B during mitotic cell cycle","type":"exact"},{"name":"decreased protein localization to spindle midzone, with protein distributed along spindle, during anaphase B of mitosis","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone, with protein distributed along spindle, during anaphase B","type":"exact"}],"termid":"FYPO:0006644"}


id: MONDO:0005773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gerstmann syndrome is a very rare neurological disorder characterized by the specific association of acalculia, finger agnosia, left-right disorientation, and agraphia, which is supposed to be secondary to a focal subcortical white matter damage in the parietal lobe.","definition_xrefs":["Orphanet:221117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gerstmann syndrome","secondary_identifiers":["icd11.foundation:1121787098","DOID:4969","MedDRA:10048608","EFO:0007285","MEDGEN:42208","NORD:1180","GARD:8660","UMLS:C0017494","SCTID:36785009","MESH:D005862","ICD9:784.69"],"synonyms":[{"name":"GS","type":"related"},{"name":"Gerstmann Badal syndrome","type":"related"},{"name":"Gerstmann tetrad","type":"related"},{"name":"aphasia-angular gyrus syndrome","type":"exact"},{"name":"developmental Gerstmann syndrome","type":"related"}],"termid":"MONDO:0005773","xrefs":{"Monarch":{"xref_id":"0005773"}}}


id: PBO:0040104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arsenite methyltransferase","termid":"PBO:0040104"}


id: PBO:0108525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper like post translational regulator 1","termid":"PBO:0108525"}


id: PBO:0063006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b catalytic subunit 2","termid":"PBO:0063006"}


id: FYPO:0003599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0034472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal snRNA 3'-end processing","synonyms":[{"name":"normal snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"normal snRNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0003599"}


id: GO:0000712
data:
  {"annotated_genes":["SJAG_03219","SJAG_02616","SJAG_02295","SJAG_02822","SJAG_01044","SJAG_02465","SJAG_00623","SJAG_00935","SJAG_03567","SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76405,101016,105663,107612,108544,109782,116552,116739,116890,118201],"is_not":false,"summary":null,"term":"GO:0000712"}]},"cv_name":"biological_process","definition":"The cleavage and rejoining of intermediates, such as Holliday junctions, formed during meiotic recombination to produce two intact molecules in which genetic material has been exchanged.","definition_xrefs":["GOC:elh","PMID:11733053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_00935":null,"SJAG_01044":null,"SJAG_02295":null,"SJAG_02465":null,"SJAG_02556":null,"SJAG_02616":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0140013","GO:0006310","GO:0007049","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"resolution of meiotic recombination intermediates","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"resolution of meiotic joint molecules as recombinants","type":"narrow"}],"termid":"GO:0000712","terms_by_termid":{"GO:0000712":null}}


id: FYPO:0000355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the endoplasmic reticulum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal endoplasmic reticulum morphology","synonyms":[{"name":"endoplasmic reticulum morphology: normal","type":"related"},{"name":"normal ER morphology","type":"exact"},{"name":"normal endoplasmic reticulum morphology during mitotic cell cycle","type":"related"},{"name":"normal endoplasmic reticulum morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0000355"}


id: PBO:0062560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 7","termid":"PBO:0062560"}


id: MONDO:0010117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3-M syndrome in which the cause of the disease is a mutation in the CUL7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-M syndrome","termid":"MONDO:0007477"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"3M syndrome 1","secondary_identifiers":["GARD:15239","OMIM:273750","UMLS:C2678312","MEDGEN:395592"],"synonyms":[{"name":"3-M syndrome 1","type":"exact"},{"name":"3-M syndrome caused by mutation in CUL7","type":"exact"},{"name":"3-M syndrome caused by mutation in Cul7","type":"exact"},{"name":"3M syndrome","type":"related"},{"name":"3M1","type":"related"},{"name":"CUL7 3-M syndrome","type":"exact"},{"name":"Cul7 3-M syndrome","type":"exact"},{"name":"Dolichospondylic dysplasia","type":"related"},{"name":"Le Merrer syndrome","type":"related"},{"name":"Yakut short stature syndrome","type":"related"},{"name":"gloomy face syndrome","type":"related"},{"name":"three M syndrome 1","type":"exact"},{"name":"three M syndrome type 1","type":"exact"}],"termid":"MONDO:0010117","xrefs":{"Monarch":{"xref_id":"0010117"}}}


id: GO:0008052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which boundaries between a sensory organ and the surrounding tissue are established and maintained.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of animal organ boundary","termid":"GO:0010160"},{"relation_name":"part_of","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ boundary specification","synonyms":[{"name":"sense organ boundary specification","type":"exact"}],"termid":"GO:0008052"}


id: PBO:0091318
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Recovery of STe11 expression","termid":"PBO:0091318"}


id: PBO:0085954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is viable but shows increased loss of mitochondrial genome and synthetic interaction with prohibitin (phb1); contains an intron; SWAT-GFP and mCherry fusion proteins localize to the mitochondria; YER093C-A has a paralog, YBL059W, that arose from the whole genome duplication","termid":"PBO:0085954"}


id: PBO:0044949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 5","termid":"PBO:0044949"}


id: PBO:0073775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC4A8 antisense RNA 1","termid":"PBO:0073775"}


id: GO:0051913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chemical substance modulates synaptic plasticity, the ability of synapses to change as circumstances require.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic plasticity by chemical substance","synonyms":[{"name":"regulation of synaptic plasticity by drug","type":"narrow"}],"termid":"GO:0051913"}


id: PBO:0039045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 5","termid":"PBO:0039045"}


id: MONDO:0007020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute neurological disorder characterized by the triad of ophthalmoplegia, ataxia, and disturbances of mental activity or consciousness. Eye movement abnormalities include nystagmus, external rectus palsies, and reduced conjugate gaze. thiamine deficiency and chronic alcoholism are associated conditions. Pathologic features include periventricular petechial hemorrhages and neuropil breakdown in the diencephalon and brainstem. Chronic thiamine deficiency may lead to korsakoff syndrome. (Adams et al., Principles of Neurology, 6th ed, pp1139-42; Davis & Robertson, Textbook of Neuropathology, 2nd ed, pp452-3)","definition_xrefs":["MESH:D014899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"alcohol-related disorders","termid":"MONDO:0021698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wernicke encephalopathy","secondary_identifiers":["DOID:2384","ICD9:265.1","ICD10CM:E51.2","icd11.foundation:1360335041","MEDGEN:53073","Orphanet:97354","UMLS:C0043121","SCTID:21007002"],"synonyms":[{"name":"Wernicke's disease","type":"exact"},{"name":"Wernicke's encephalopathy","type":"exact"},{"name":"dementia due to thiamine deficiency","type":"exact"}],"termid":"MONDO:0007020","xrefs":{"Monarch":{"xref_id":"0007020"}}}


id: GO:0046922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-L-fucosyl residue from GDP- beta-L-fucose to the serine hydroxy group of a protein acceptor.","definition_xrefs":["EC:2.4.1.221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0140096","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"peptide-O-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5173192","Reactome:R-HSA-1912349","MetaCyc:2.4.1.221-RXN"],"synonyms":[{"name":"GDP-L-fucose:polypeptide fucosyltransferase activity","type":"related"},{"name":"GDP-beta-L-fucose:polypeptide O-alpha-L-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose protein O-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:polypeptide fucosyltransferase activity","type":"related"}],"termid":"GO:0046922"}


id: PBO:0057177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 329-1","termid":"PBO:0057177"}


id: GO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytolysis by symbiont of host cells (obsolete GO:0001900)","synonyms":[{"name":"activation by symbiont of cytolysis of host cells","type":"narrow"},{"name":"positive regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"stimulation by symbiont of cytolysis of host cells","type":"narrow"},{"name":"up regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"up-regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"upregulation by symbiont of cytolysis of host cells","type":"exact"}],"termid":"GO:0001900"}


id: PBO:0002462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin BimC subfamily","termid":"PBO:0002462"}


id: PBO:0077958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 13-2","termid":"PBO:0077958"}


id: FYPO:0002623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to a glucose stimulus is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to glucose stimulus","synonyms":[{"name":"decreased RNA accumulation during cellular response to glucose stimulus","type":"related"},{"name":"decreased RNA level during cellular response to glucose","type":"exact"},{"name":"decreased RNA level during cellular response to glucose stimulus during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to glucose stimulus during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to glucose stimulus","type":"narrow"},{"name":"decreased transcript level during cellular response to glucose stimulus","type":"exact"},{"name":"reduced RNA level during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0002623"}


id: MOD:01536
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["Unimod:730#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01536"}


id: PBO:0027435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortical_node","termid":"PBO:0027435"}


id: PBO:0003372
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Another DNA Ligase","termid":"PBO:0003372"}


id: PBO:0067975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 277","termid":"PBO:0067975"}


id: PBO:0113337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is viable but shows increased loss of mitochondrial genome and synthetic interaction with prohibitin (phb1); contains an intron; SWAT-GFP and mCherry fusion proteins localize to the mitochondria; localizes to the peroxisome in glucose; YER093C-A has a paralog, YBL059W, that arose from the whole genome duplication","termid":"PBO:0113337"}


id: GO:0003961
data:
  {"annotated_genes":["SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051009"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-acetyl-L-homoserine + methanethiol = L-methionine + acetate. Also reacts with other thiols and H2S, producing homocysteine or thioethers.","definition_xrefs":["EC:2.5.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"O-acetylhomoserine aminocarboxypropyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019282","MetaCyc:O-ACETYLHOMOSERINE-THIOL-LYASE-RXN"],"synonyms":[{"name":"L-methionine anabolism, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"L-methionine biosynthetic process, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"L-methionine formation, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"L-methionine synthesis, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"O-acetyl-L-homoserine acetate-lyase (adding methanethiol) activity","type":"related"},{"name":"O-acetyl-L-homoserine sulfhydrolase activity","type":"related"},{"name":"O-acetyl-L-homoserine:methanethiol 3-amino-3-carboxypropyltransferase activity","type":"related"},{"name":"O-acetylhomoserine (thiol)-lyase activity","type":"exact"},{"name":"O-acetylhomoserine sulfhydrolase activity","type":"related"},{"name":"OAH sulfhydrylase activity","type":"related"},{"name":"methionine biosynthetic process, direct, from O-acetyl-L-homoserine","type":"exact"}],"termid":"GO:0003961","terms_by_termid":{"GO:0051009":null}}


id: PBO:0054488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1888","termid":"PBO:0054488"}


id: GO:0047296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 putrescine = NH3 + sym-homospermidine.","definition_xrefs":["EC:2.5.1.44","MetaCyc:2.5.1.44-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"homospermidine synthase activity","secondary_identifiers":["RHEA:18645"],"synonyms":[{"name":"putrescine:putrescine 4-aminobutyltransferase (ammonia-forming)","type":"related"}],"termid":"GO:0047296"}


id: MONDO:0021136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder is defined as rare in Europe when it affects fewer than 1 in 2000. A disease or disorder is defined as rare in the USA when it affects fewer than 200,000 persons at any given time. Here we take the European definition to be consistent with Orphanet.","direct_ancestors":[{"relation_name":"is_a","term_name":"rare or common","termid":"MONDO:0021135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rare","synonyms":[{"name":"rare (European definition)","type":"exact"}],"termid":"MONDO:0021136","xrefs":{"Monarch":{"xref_id":"0021136"}}}


id: PBO:0029722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytoplasmic_microtubules","termid":"PBO:0029722"}


id: PBO:0057538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 654","termid":"PBO:0057538"}


id: MONDO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious viral infection caused by the mumps virus. Symptoms include swollen and tender parotid glands, fever, muscle aches and fatigue. Due to vaccination programs, mumps has become a rare disease.","definition_xrefs":["NCIT:C29888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Paramyxoviridae infectious disease","termid":"MONDO:0005896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mumps infectious disease","secondary_identifiers":["UMLS:C0026780","ICD10CM:B26","MONDO:0005863","EFO:0007383","MESH:D009107","MEDGEN:44521","MESH:D019351","DOID:10264","ICD9:072","SCTID:36989005"],"synonyms":[{"name":"Mumps virus caused disease or disorder","type":"exact"},{"name":"Mumps virus disease or disorder","type":"exact"},{"name":"Mumps virus infectious disease","type":"exact"},{"name":"epidemic parotitis","type":"exact"},{"name":"mumps","type":"exact"},{"name":"mumps virus infectious disease","type":"related"}],"termid":"MONDO:0000989","xrefs":{"Monarch":{"xref_id":"0000989"}}}


id: SO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Dictyostelium intermediate repeat sequence (DIRS) retrotransposons are members of the YR_retrotransposon (SO:0002286) superfamily with the following protein domains: RT, RH, YR, and MT. RT is a reverse transcriptase. RH is RNAse H. YR is tyrosine recombinase. MT is DNA N-6-adenine-methyltransferase.","definition_xrefs":["PMID:24086727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRS_YR_retrotransposon","synonyms":[{"name":"DIRS YR retrotransposon","type":"exact"},{"name":"DIRS retrotransposon","type":"exact"},{"name":"RYD retrotransposon","type":"exact"}],"termid":"SO:0002287"}


id: GO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving globosides, globotetraosylceramides, ceramides containing a core structure of GalNAc-beta-(1->3)-Gal-alpha-(1->4)-Glc(I). Globosides are the major neutral glycosphingolipid in normal kidneys and erythrocytes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"globoside metabolic process","synonyms":[{"name":"globoside metabolism","type":"exact"}],"termid":"GO:0001575"}


id: PBO:0042297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD6 molecule","termid":"PBO:0042297"}


id: GO:0009756
data:
  {"annotated_genes":["SJAG_04551","SJAG_04312","SJAG_00472","SJAG_01245","SJAG_01699","SJAG_02444","SJAG_00574","SJAG_00424","SJAG_02311","SJAG_02481","SJAG_00610","SJAG_04026","SJAG_01254","SJAG_00266","SJAG_02426","SJAG_03081","SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105962,105373,108471,114974,116006,106311,101338,108977,93734],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[99932,107434,91596,115826,92254],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"},{"annotations":[88949,101632,102330],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902660"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of carbohydrate.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00424":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00610":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"carbohydrate mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate mediated signalling","type":"exact"}],"termid":"GO:0009756","terms_by_termid":{"GO:0010619":null,"GO:0110034":null,"GO:1902660":null}}


id: MOD:01540
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01540"}


id: PBO:0091667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing conserved fungal protein Wwm3","termid":"PBO:0091667"}


id: PBO:0071646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 10","termid":"PBO:0071646"}


id: GO:1902579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A localization which involves another organism.","definition_xrefs":["GO_REF:0000089","GOC:jl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism localization (obsolete GO:1902579)","synonyms":[{"name":"multi organism localization","type":"exact"}],"termid":"GO:1902579"}


id: MONDO:0006176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma characterized by the presence of a cribriform architectural pattern. Representative examples include the intraductal cribriform breast carcinoma and invasive cribriform breast carcinoma.","definition_xrefs":["NCIT:C3680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cribriform carcinoma","secondary_identifiers":["ICDO:8201/3","UMLS:C0205643","EFO:1000210","MEDGEN:104694"],"synonyms":[{"name":"cribriform carcinoma","type":"exact"}],"termid":"MONDO:0006176","xrefs":{"Monarch":{"xref_id":"0006176"}}}


id: MONDO:0958326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular dystrophy with or without cone dysfunction","secondary_identifiers":["OMIM:620762"],"termid":"MONDO:0958326","xrefs":{"Monarch":{"xref_id":"0958326"}}}


id: PBO:0086738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; partial duplicate of RSC30/YHR056C, truncated remnant of segmental duplication","termid":"PBO:0086738"}


id: GO:0016305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A phosphoinositide 3-kinase which can phosphorylate phosphatidylinositol and phosphatidylinositol-4-phosphate; the human form can phosphorylate phosphatidylinositol-4,5-bisphosphate in the presence of phosphatidylserine.","definition_xrefs":["PMID:9759495"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity, class II (obsolete GO:0016305)","synonyms":[{"name":"PI3KC2","type":"exact"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"exact"}],"termid":"GO:0016305"}


id: MONDO:0020427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laubry-Pezzi syndrome is a rare, non-syndromic, congenital heart malformation characterized by the prolapse of an aortic valve cusp into a subjacent ventricular septal defect due to Venturi effect, resulting in aortic regurgitation. Patients typically present with symptoms of progressive aortic valve insufficiency, such as shortness of breath, heart palpitations, chest pain and exercise intolerance.","definition_xrefs":["Orphanet:99094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laubry-Pezzi syndrome","secondary_identifiers":["MEDGEN:1643612","UMLS:C4707235","GARD:19646","SCTID:764955006"],"synonyms":[{"name":"VSD with aortic insufficiency","type":"exact"},{"name":"ventricular septal defect with aortic insufficiency","type":"exact"}],"termid":"MONDO:0020427","xrefs":{"Monarch":{"xref_id":"0020427"}}}


id: PBO:0069484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 751, pseudogene","termid":"PBO:0069484"}


id: PBO:0038547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 1","termid":"PBO:0038547"}


id: PBO:0081713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 638","termid":"PBO:0081713"}


id: MONDO:0957595
data:
  {"annotated_genes":["SJAG_00328"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85748],"is_not":false,"summary":null,"term":"MONDO:0957595"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow failure syndrome","termid":"MONDO:0000159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Ziegler-Huang syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882688","OMIM:620501","MEDGEN:1844409"],"termid":"MONDO:0957595","terms_by_termid":{"MONDO:0957595":null},"xrefs":{"Monarch":{"xref_id":"0957595"}}}


id: GO:0031346
data:
  {"annotated_genes":["SJAG_04509","SJAG_03453","SJAG_00514","SJAG_01794","SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90359,110817,87410,89379,92980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell projection organization","type":"narrow"},{"name":"positive regulation of cell projection organisation","type":"exact"},{"name":"positive regulation of cell projection organization and biogenesis","type":"related"},{"name":"stimulation of cell projection organization","type":"narrow"},{"name":"up regulation of cell projection organization","type":"exact"},{"name":"up-regulation of cell projection organization","type":"exact"},{"name":"upregulation of cell projection organization","type":"exact"}],"termid":"GO:0031346","terms_by_termid":{"GO:1902917":null}}


id: PBO:0052510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 24","termid":"PBO:0052510"}


id: MONDO:0021374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a cerebral hemisphere.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of cerebral hemisphere","secondary_identifiers":["MEDGEN:224729","UMLS:C1263885","SCTID:126953009","NCIT:C4874"],"synonyms":[{"name":"cerebral hemisphere neoplasm","type":"exact"},{"name":"cerebral hemisphere tumor","type":"exact"},{"name":"cerebral hemisphere tumour","type":"exact"},{"name":"cerebral hemispheric neoplasm","type":"exact"},{"name":"cerebral hemispheric tumor","type":"exact"},{"name":"cerebral hemispheric tumour","type":"exact"},{"name":"cerebral neoplasm","type":"exact"},{"name":"cerebral neoplasms","type":"exact"},{"name":"cerebral tumor","type":"exact"},{"name":"cerebral tumour","type":"exact"},{"name":"neoplasm of cerebral hemisphere","type":"exact"},{"name":"neoplasm of cerebral hemispheres","type":"exact"},{"name":"neoplasm of cerebrum","type":"exact"},{"name":"neoplasm of telencephalon","type":"exact"},{"name":"neoplasm of the cerebral hemispheres","type":"exact"},{"name":"neoplasm of the cerebrum","type":"exact"},{"name":"telencephalon neoplasm (disease)","type":"exact"},{"name":"telencephalon tumor","type":"exact"},{"name":"telencephalon tumour","type":"exact"},{"name":"tumor of cerebral hemisphere","type":"exact"},{"name":"tumor of cerebral hemispheres","type":"exact"},{"name":"tumor of cerebrum","type":"exact"},{"name":"tumor of telencephalon","type":"exact"},{"name":"tumor of the cerebral hemispheres","type":"exact"},{"name":"tumor of the cerebrum","type":"exact"},{"name":"tumour of cerebral hemisphere","type":"exact"},{"name":"tumour of cerebral hemispheres","type":"exact"},{"name":"tumour of cerebrum","type":"exact"},{"name":"tumour of telencephalon","type":"exact"},{"name":"tumour of the cerebral hemispheres","type":"exact"},{"name":"tumour of the cerebrum","type":"exact"}],"termid":"MONDO:0021374","xrefs":{"Monarch":{"xref_id":"0021374"}}}


id: MONDO:0012647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete generalized epilepsy with febrile seizures plus, type 3 (obsolete MONDO:0012647)","termid":"MONDO:0012647","xrefs":{"Monarch":{"xref_id":"0012647"}}}


id: MONDO:0023065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete encephalopathy recurrent of childhood (obsolete MONDO:0023065)","termid":"MONDO:0023065","xrefs":{"Monarch":{"xref_id":"0023065"}}}


id: PBO:0028337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028337"}


id: GO:0031610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits of the regulatory particle that directly associate with the core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle, base subcomplex","termid":"GO:0008540"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome regulatory particle","termid":"GO:0031598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nuclear proteasome regulatory particle, base subcomplex","termid":"GO:0031610"}


id: PBO:0052885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-8","termid":"PBO:0052885"}


id: PBO:0077637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMX2-CTNND1 readthrough (NMD candidate)","termid":"PBO:0077637"}


id: GO:0050893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural process required for an organism to sense and interpret the dimensions of a sensory experience: modality, location, intensity and affect.","definition_xrefs":["ISBN:0721662544","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cognition","termid":"GO:0050890"},{"relation_name":"part_of","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory processing","termid":"GO:0050893"}


id: PBO:0111817
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT1 subfamily","termid":"PBO:0111817"}


id: GO:0018586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: butyltin + O2 + 2 H+ + 2 e- = H2O + beta-hydroxybutyltin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mono-butyltin dioxygenase activity (obsolete GO:0018586)","synonyms":[{"name":"MBT dioxygenase activity","type":"exact"}],"termid":"GO:0018586"}


id: FYPO:0003763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable and contains one nucleus and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aseptate mononucleate vegetative cell","termid":"FYPO:0003785"},{"relation_name":"is_a","term_name":"inviable aseptate vegetative cell","termid":"FYPO:0003931"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0000631"],"is_obsolete":false,"name":"inviable aseptate mononucleate vegetative cell","synonyms":[{"name":"inviable aseptate mononucleate cell during vegetative growth","type":"exact"},{"name":"inviable aseptate mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable mononucleate aseptate vegetative cell","type":"exact"},{"name":"inviable unseptated mononucleate vegetative cell","type":"exact"},{"name":"lethal; aseptate mononucleate vegetative cell","type":"exact"}],"termid":"FYPO:0003763"}


id: PBO:0046257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 6","termid":"PBO:0046257"}


id: PBO:0070131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 45 pseudogene","termid":"PBO:0070131"}


id: PBO:0013012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp4 family, Rna4","termid":"PBO:0013012"}


id: GO:1990760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when a change in the osmolarity occurs in the extracellular space of the cell in which the cation channel resides.","definition_xrefs":["PMID:18279313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osmosensor activity","termid":"GO:0005034"},{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0098772","GO:0140299","GO:0022857","GO:0005215","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"osmolarity-sensing monoatomic cation channel activity","synonyms":[{"name":"osmolarity-sensing cation channel activity","type":"broad"}],"termid":"GO:1990760"}


id: PR:P78827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ilv5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketol-acid reductoisomerase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.12","synonyms":[{"name":"Spom972h-ilv5","type":"exact"},{"name":"acetohydroxy-acid reductoisomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-keto-beta-hydroxylacyl reductoisomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78827"}


id: PBO:0029846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_rDNA","termid":"PBO:0029846"}


id: GO:0042866
data:
  {"annotated_genes":["SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97773],"is_not":false,"summary":null,"term":"GO:0042866"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyruvate, 2-oxopropanoate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyruvate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyruvate anabolism","type":"exact"},{"name":"pyruvate biosynthesis","type":"exact"},{"name":"pyruvate formation","type":"exact"},{"name":"pyruvate synthesis","type":"exact"}],"termid":"GO:0042866","terms_by_termid":{"GO:0042866":null}}


id: PR:P87059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial intermembrane space import and assembly protein 40 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21622:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space import and assembly protein 40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.11c","secondary_identifiers":["UniProtKB:P87059"],"synonyms":[{"name":"SPAC57A10.11c","type":"related"},{"name":"Spom972h-CHCHD4","type":"exact"},{"name":"mitochondrial import inner membrane translocase TIM40 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tim40","type":"related"}],"termid":"PR:P87059"}


id: SO:0001538
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which alters the functioning of a transcript with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_function_variant","synonyms":[{"name":"transcript function variant","type":"exact"}],"termid":"SO:0001538"}


id: MONDO:0006399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rhabdoid tumor of the kidney (obsolete MONDO:0006399)","termid":"MONDO:0006399","xrefs":{"Monarch":{"xref_id":"0006399"}}}


id: GO:0046952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Ketone bodies can be used as an energy source as an alternative to glucose. Utilization of ketone bodies in peripheral tissues involves conversion of acetoacetate to acetoacetyl-CoA, which is then converted to two molecules of acetyl-CoA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"},{"relation_name":"is_a","term_name":"ketone body metabolic process","termid":"GO:1902224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006091","GO:0006629"],"is_obsolete":false,"name":"ketone body catabolic process","secondary_identifiers":["MetaCyc:PWY66-368","Reactome:R-HSA-77108"],"synonyms":[{"name":"ketolysis","type":"exact"},{"name":"ketone body breakdown","type":"exact"},{"name":"ketone body catabolism","type":"exact"},{"name":"ketone body degradation","type":"exact"},{"name":"utilization of ketone bodies","type":"exact"}],"termid":"GO:0046952"}


id: PBO:0075302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOCS2 antisense RNA 1","termid":"PBO:0075302"}


id: PBO:0004461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream activation factor complex subunit Acr1","termid":"PBO:0004461"}


id: PBO:0045620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 32 (pseudogene)","termid":"PBO:0045620"}


id: GO:0010276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phytol + CTP = phytyl monophosphate + CDP + H+.","definition_xrefs":["RHEA:38055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phytol kinase activity","secondary_identifiers":["EC:2.7.1.182","MetaCyc:RXN-7683"],"termid":"GO:0010276"}


id: GO:0140715
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme complex that catalyzes the ligation of serine to tRNA(Ser), forming L-seryl-tRNA(Ser).","definition_xrefs":["PMID:30943413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"serine-tRNA ligase complex","termid":"GO:0140715"}


id: GO:0002591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class I.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002585"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002589"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"activation of antigen processing and presentation of peptide antigen via MHC class I","type":"narrow"},{"name":"positive regulation of peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide antigen via MHC class I","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"}],"termid":"GO:0002591"}


id: GO:0045672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osteoclast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of osteoclast differentiation","termid":"GO:0045670"},{"relation_name":"positively_regulates","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoclast differentiation","synonyms":[{"name":"activation of osteoclast differentiation","type":"narrow"},{"name":"stimulation of osteoclast differentiation","type":"narrow"},{"name":"up regulation of osteoclast differentiation","type":"exact"},{"name":"up-regulation of osteoclast differentiation","type":"exact"},{"name":"upregulation of osteoclast differentiation","type":"exact"}],"termid":"GO:0045672"}


id: SO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a vaultRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaultRNA_primary_transcript","synonyms":[{"name":"vaultRNA primary transcript","type":"exact"}],"termid":"SO:0002040"}


id: MONDO:0001792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"excessive tearing","termid":"MONDO:0001793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epiphora due to insufficient drainage","secondary_identifiers":["UMLS:C0155234","DOID:13756","ICD9:375.22","SCTID:85042000","icd11.foundation:2073269541","MEDGEN:509862"],"termid":"MONDO:0001792","xrefs":{"Monarch":{"xref_id":"0001792"}}}


id: GO:0102689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + N(6)-dimethylallyladenine = H+ + 7-(alpha-D-glucosyl)-N(6)-isopentenyladenine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:isopentenyladenine 7-N-glucosyltransferase activity (obsolete GO:0102689)","termid":"GO:0102689"}


id: FYPO:0003769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial DNA present in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA content decreased during vegetative growth","termid":"FYPO:0000453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular mtDNA level","synonyms":[{"name":"decreased mitochondrial DNA content","type":"exact"},{"name":"decreased mitochondrial DNA copy number","type":"related"},{"name":"decreased mitochondrial DNA level","type":"exact"},{"name":"decreased mitochondrial genome copy number","type":"related"},{"name":"decreased mtDNA level","type":"exact"},{"name":"decreased mtDNA level during mitotic cell cycle","type":"related"},{"name":"decreased mtDNA level during vegetative growth","type":"exact"},{"name":"loss of mitochondrial DNA","type":"exact"},{"name":"reduced mitochondrial DNA content","type":"exact"},{"name":"reduced mtDNA level","type":"exact"}],"termid":"FYPO:0003769"}


id: MONDO:0100384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(11;19)(q23;p13.1). (A cytogenetic abnormality that refers to the translocation of the long arm (q23) of chromosome 11 and the short arm (p13.1) of chromosome 19. It is associated with the development of acute myeloid leukemia with variant MLL translocations and topoisomerase II inhibitor-related acute myeloid leukemia.)","definition_xrefs":["NCIT:C36371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, t(11;19)(q23;p13.1)","synonyms":[{"name":"AML, t(11;19)(q23;p13.1)","type":"exact"}],"termid":"MONDO:0100384","xrefs":{"Monarch":{"xref_id":"0100384"}}}


id: MONDO:1011530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperadrenocorticism that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperadrenocorticism, non-human animal","termid":"MONDO:1011403"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperadrenocorticism, dog","secondary_identifiers":["OMIA:000494-9615"],"termid":"MONDO:1011530","xrefs":{"Monarch":{"xref_id":"1011530"}}}


id: GO:0030476
data:
  {"annotated_genes":["SJAG_04868","SJAG_00974","SJAG_03013","SJAG_01321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87726,88219,89760,91278],"is_not":false,"summary":null,"term":"GO:0030476"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an ascospore wall. During sporulation in Ascomycota, each ascospore nucleus becomes surrounded by a specialized spore wall, formed by deposition of spore wall components in the lumenal space between the outer and inner leaflets of the prospore membrane. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mcc","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"spore wall assembly","termid":"GO:0042244"},{"relation_name":"is_a","term_name":"fungal-type cell wall assembly","termid":"GO:0071940"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore wall biogenesis","termid":"GO:0070591"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0007049","GO:0044085","GO:0030437"],"is_obsolete":false,"name":"ascospore wall assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007152"],"synonyms":[{"name":"spore wall assembly","type":"broad"}],"termid":"GO:0030476","terms_by_termid":{"GO:0030476":null}}


id: PBO:0112694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyldihydroxybenzoate methyltransferase Coq3","termid":"PBO:0112694"}


id: FYPO:0002374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cortical patches is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch morphology","termid":"FYPO:0000791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0004803","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin cortical patch morphology during mitosis","synonyms":[{"name":"abnormal F-actin patch morphology during mitosis","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitosis during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch morphology during mitosis during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitotic M phase","type":"related"},{"name":"abnormal actin cortical patch morphology during mitotic nuclear division","type":"exact"},{"name":"abnormal actin patch morphology during mitosis","type":"exact"}],"termid":"FYPO:0002374"}


id: PBO:0063644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 1","termid":"PBO:0063644"}


id: MONDO:0002942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"sebaceous basal cell carcinoma","secondary_identifiers":["DOID:4286","MEDGEN:83180","UMLS:C0334683"],"synonyms":[{"name":"skin basosebaceous basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002942","xrefs":{"Monarch":{"xref_id":"0002942"}}}


id: PR:P40995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scd1 gene.","definition_xrefs":["UniProtKB:P40995","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho guanine nucleotide exchange factor scd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.09","synonyms":[{"name":"Spom972h-scd1","type":"exact"}],"termid":"PR:P40995"}


id: MONDO:0006996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute onset of severe, life-threatening hyperthyroidism caused by a sudden release of excessive thyroid hormone.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroidism","termid":"MONDO:0004425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid crisis","secondary_identifiers":["icd11.foundation:1215823328","DOID:12837","MESH:D013958","ICD9:242.81","HP:0011782","NCIT:C112836","SCTID:29028009","UMLS:C0040127","ICD9:242.91","EFO:1001212","MedDRA:10043705","MEDGEN:11813"],"synonyms":[{"name":"thyroid crisis","type":"exact"},{"name":"thyroid crisis (disease)","type":"exact"},{"name":"thyroid storm","type":"exact"},{"name":"thyrotoxic crisis","type":"exact"}],"termid":"MONDO:0006996","xrefs":{"Monarch":{"xref_id":"0006996"}}}


id: PBO:0058384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4756","termid":"PBO:0058384"}


id: PBO:0076178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 2A member 1","termid":"PBO:0076178"}


id: PBO:0035930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K4_methylation_during_vegetative_growth","termid":"PBO:0035930"}


id: GO:0062223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the rate, frequency or extent of somatic muscle development.","definition_xrefs":["PMID:25758712","PMID:16643882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somatic muscle development","termid":"GO:0062223"}


id: MONDO:0017242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous collagenous vasculopathy (CCV) is a primary microangiopathy confined to the skin, characterized by multiple and widespread telangiectasias.","definition_xrefs":["Orphanet:280779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous collagenous vasculopathy","secondary_identifiers":["SCTID:718634003","icd11.foundation:878108553","MEDGEN:930992","UMLS:C4305323","GARD:12428"],"synonyms":[{"name":"CCV","type":"exact"},{"name":"cutaneus colagenous vasculopathy","type":"related"}],"termid":"MONDO:0017242","xrefs":{"Monarch":{"xref_id":"0017242"}}}


id: PBO:0070964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 2","termid":"PBO:0070964"}


id: GO:0070760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-35-mediated signaling pathway","termid":"GO:0070758"},{"relation_name":"positively_regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070760"}


id: MONDO:0859515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 10b, mild variant","secondary_identifiers":["OMIM:620249","DOID:0081345","UMLS:C3541476","MEDGEN:762102"],"termid":"MONDO:0859515","xrefs":{"Monarch":{"xref_id":"0859515"}}}


id: PBO:0058495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR5689 host gene","termid":"PBO:0058495"}


id: PATO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of bearer's number of nuclei.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleate quality","termid":"PATO:0001404"}


id: PBO:0046442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPN2 antisense RNA 1","termid":"PBO:0046442"}


id: PBO:0064830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R9A antisense RNA 1","termid":"PBO:0064830"}


id: GO:0007531
data:
  {"annotated_genes":["SJAG_00399","SJAG_01465","SJAG_05153","SJAG_00757","SJAG_02079","SJAG_06638","SJAG_01677","SJAG_02556","SJAG_05239","SJAG_03097","SJAG_02401","SJAG_02226","SJAG_01113","SJAG_02828","SJAG_01601","SJAG_02724","SJAG_01068","SJAG_01419","SJAG_01410","SJAG_00247","SJAG_00073","SJAG_01495","SJAG_02319","SJAG_02460","SJAG_01076","SJAG_03997","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106518,118519,118520],"is_not":false,"summary":null,"term":"GO:0007531"},{"annotations":[116292,98623,118277,87445],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[95677,105535,106099,88805,88677,87446,118196,109756,98624,100071,114463,116244,96928,107974,110272],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[109757,92182,96153,110273,98626,95678,98561,118197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007533"},{"annotations":[107975,93585,102440,102709],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[92857],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"Any process that establishes and transmits the specification of mating type upon an individual. Mating types are the equivalent in microorganisms of the sexes in higher organisms.","definition_xrefs":["PMID:8274857","PMID:8785123","PMID:33313646","PMID:28916791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_00399":null,"SJAG_00757":null,"SJAG_01068":null,"SJAG_01076":null,"SJAG_01113":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02319":null,"SJAG_02401":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03997":null,"SJAG_05153":null,"SJAG_05239":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating type determination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007531","terms_by_termid":{"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0071171":null,"GO:0071515":null}}


id: SO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the macronuclei of ciliates.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macronuclear_sequence","synonyms":[{"name":"macronuclear sequence","type":"exact"}],"termid":"SO:0000083"}


id: MONDO:0018475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"PRKAR1B-related neurodegenerative dementia with intermediate filaments","secondary_identifiers":["GARD:21738","Orphanet:412066","MEDGEN:1654800","UMLS:C4751505"],"termid":"MONDO:0018475","xrefs":{"Monarch":{"xref_id":"0018475"}}}


id: PBO:0072947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 27","termid":"PBO:0072947"}


id: PBO:0091188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 2","termid":"PBO:0091188"}


id: MONDO:0800305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary myelofibrosis","termid":"MONDO:0009692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"myelofibrosis with myeloid metaplasia","secondary_identifiers":["icd11.foundation:673220507"],"synonyms":[{"name":"MMM","type":"exact"}],"termid":"MONDO:0800305","xrefs":{"Monarch":{"xref_id":"0800305"}}}


id: SO:0000505
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one D-gene and one DJ-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_DJ_cluster","synonyms":[{"name":"D DJ cluster","type":"exact"},{"name":"D-(DJ)-CLUSTER","type":"exact"}],"termid":"SO:0000505"}


id: MONDO:0021056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any attenuated familial adenomatous polyposis in which the cause of the disease is a mutation in the APC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attenuated familial adenomatous polyposis","termid":"MONDO:0016362"},{"relation_name":"is_a","term_name":"classic familial adenomatous polyposis","termid":"MONDO:0021055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis 1","secondary_identifiers":["MEDGEN:398651","DOID:0080409","OMIM:175100","UMLS:C2713442"],"synonyms":[{"name":"APC attenuated familial adenomatous polyposis","type":"exact"},{"name":"FAP1","type":"exact"},{"name":"Gardner syndrome","type":"related"},{"name":"adenoma, periampullary, somatic","type":"exact"},{"name":"adenomatous polyposis coli","type":"broad"},{"name":"adenomatous polyposis coli, attenuated","type":"related"},{"name":"adenomatous polyposis of the colon","type":"related"},{"name":"attenuated familial adenomatous polyposis caused by mutation in APC","type":"exact"},{"name":"brain tumor-polyposis syndrome 2","type":"related"},{"name":"familial adenomatous polyposis 1","type":"exact"},{"name":"familial adenomatous polyposis, attenuated","type":"related"},{"name":"familial polyposis of the colon","type":"related"},{"name":"polyposis, adenomatous intestinal","type":"related"}],"termid":"MONDO:0021056","xrefs":{"Monarch":{"xref_id":"0021056"}}}


id: GO:0022875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + galactitol(out) = protein histidine + galactitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"galactitol transmembrane transporter activity","termid":"GO:0015577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0005215","GO:0022857","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-galactitol phosphotransferase system transmembrane transporter activity","synonyms":[{"name":"galactitol PTS transporter activity","type":"exact"}],"termid":"GO:0022875"}


id: GO:1902194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:15574432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"2-methylbut-2-enoyl-CoA(4-) metabolic process","termid":"GO:1902192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"2-methylbut-2-enoyl-CoA(4-) biosynthetic process","synonyms":[{"name":"2-methylbut-2-enoyl-CoA(4-) anabolism","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) biosynthesis","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) formation","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) synthesis","type":"exact"}],"termid":"GO:1902194"}


id: PBO:0114294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein anchor Pex26","termid":"PBO:0114294"}


id: GO:0140888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by type II interferon binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Type II interferon is also known as interferon-gamma.","definition_xrefs":["GOC:add","PMID:32464097","GOC:signaling","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interferon-mediated signaling pathway","synonyms":[{"name":"interferon signaling pathway","type":"exact"},{"name":"interferon-activated signaling pathway","type":"exact"}],"termid":"GO:0140888"}


id: PBO:0003701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein","termid":"PBO:0003701"}


id: PBO:0072282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24","termid":"PBO:0072282"}


id: GO:0036062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region that surrounds the active zone of the presynaptic plasma membrane, and is specialized for the control of synaptic development.","definition_xrefs":["GOC:sart","PMID:18439406","PMID:10976048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"presynaptic membrane","termid":"GO:0042734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"presynaptic periactive zone","synonyms":[{"name":"periactive zone","type":"exact"},{"name":"pre-synaptic periactive zone","type":"exact"}],"termid":"GO:0036062"}


id: PBO:0001498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting (predicted)","termid":"PBO:0001498"}


id: PBO:0048688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIPR1 antisense RNA 1","termid":"PBO:0048688"}


id: PBO:0026815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_binding_specificity","termid":"PBO:0026815"}


id: MONDO:0018971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated oxycephaly is a late-appearing form of nonsyndromic craniosynostosis characterized by premature fusion of both the coronal and sagittal sutures, and, in some cases, of the lambdoid sutures. Compensatory growth in the region of the anterior fontanel results in a pointed or cone-shaped skull.","definition_xrefs":["Orphanet:63440"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"isolated craniosynostosis","termid":"MONDO:0015337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"isolated oxycephaly","secondary_identifiers":["UMLS:C5399823","MEDGEN:1726910","SCTID:48069004"],"synonyms":[{"name":"acrocephaly","type":"exact"},{"name":"hypsicephaly","type":"exact"},{"name":"hypsocephaly","type":"exact"},{"name":"pyrgocephaly","type":"exact"},{"name":"turricephaly","type":"exact"}],"termid":"MONDO:0018971","xrefs":{"Monarch":{"xref_id":"0018971"}}}


id: GO:0009420
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The long (approximately 20 nm), thin external structure of the bacterial-type flagellum, which acts as a propeller.","definition_xrefs":["GOC:mtg_sensu","GOC:cilia","PMID:10572114","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum","termid":"GO:0009288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum filament","synonyms":[{"name":"flagellar filament","type":"exact"},{"name":"flagellin-based flagellum filament","type":"exact"}],"termid":"GO:0009420"}


id: PBO:0081502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 404","termid":"PBO:0081502"}


id: PBO:0091539
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human TPM1 smooth muscle isoform","termid":"PBO:0091539"}


id: GO:0071490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of far red light stimulus. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to far red light","termid":"GO:0010218"},{"relation_name":"is_a","term_name":"cellular response to red or far red light","termid":"GO:0071489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to far red light","synonyms":[{"name":"cellular response to far red light stimulus","type":"exact"}],"termid":"GO:0071490"}


id: PBO:0070554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 20","termid":"PBO:0070554"}


id: FYPO:0000424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis begins later than normal. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of endocytosis during vegetative growth","synonyms":[{"name":"delayed endocytosis during vegetative growth","type":"exact"},{"name":"delayed onset of actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"delayed onset of endocytosis during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein internalization during vegetative growth","type":"narrow"},{"name":"endocytosis: delayed during vegetative growth","type":"related"}],"termid":"FYPO:0000424"}


id: GO:0070146
data:
  {"annotated_genes":["SJAG_04094"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117490],"is_not":false,"summary":null,"term":"GO:0070146"}]},"cv_name":"biological_process","definition":"The process of coupling aspartate to aspartyl-tRNA in a mitochondrion, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartyl-tRNA aminoacylation","termid":"GO:0006422"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0010467","GO:0006520","GO:0008150","GO:0140053","GO:0006399"],"is_obsolete":false,"name":"mitochondrial aspartyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070146","terms_by_termid":{"GO:0070146":null}}


id: PBO:0041106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSN divergent transcript","termid":"PBO:0041106"}


id: PBO:0043008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase domain containing 1","termid":"PBO:0043008"}


id: PBO:0069810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1096, pseudogene","termid":"PBO:0069810"}


id: GO:2000352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of endothelial cell apoptotic process","termid":"GO:2000351"},{"relation_name":"negatively_regulates","term_name":"endothelial cell apoptotic process","termid":"GO:0072577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell apoptotic process","synonyms":[{"name":"negative regulation of apoptosis of endothelial cells","type":"exact"},{"name":"negative regulation of endothelial cell apoptosis","type":"narrow"},{"name":"negative regulation of endothelial cell programmed cell death by apoptosis","type":"exact"},{"name":"negative regulation of killing of endothelial cells","type":"exact"},{"name":"negative regulation of programmed cell death of endothelial cells by apoptosis","type":"exact"},{"name":"negative regulation of programmed cell death, endothelial cells","type":"exact"}],"termid":"GO:2000352"}


id: GO:0106277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bilirubin IXalpha + NADP+ = biliverdin IXalpha + NADPH + H+.","definition_xrefs":["RHEA:15793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliverdin reductase [NAD(P)+] activity","termid":"GO:0004074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"biliverdin reductase (NADP+) activity","termid":"GO:0106277"}


id: FYPO:0007669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, has a larger volume than normal, and undergoes one or more rounds of rereplication of the entire genome. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PMID:8121488","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation","termid":"FYPO:0000216"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell","termid":"FYPO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"viable swollen vegetative cell with complete DNA rereplication","synonyms":[{"name":"viable enlarged vegetative cell with complete DNA rereplication","type":"related"},{"name":"viable large vegetative cell with complete DNA rereplication","type":"related"},{"name":"viable swollen cell with complete DNA rereplication during vegetative growth","type":"exact"},{"name":"viable swollen vegetative cell with abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","type":"exact"},{"name":"viable swollen vegetative cell with complete DNA rereplication during mitotic cell cycle","type":"related"},{"name":"viable swollen vegetative cell with increased ploidy","type":"exact"},{"name":"viable vegetative cell with increased cell size and complete DNA rereplication","type":"related"},{"name":"viable vegetative cell with increased cell volume and complete DNA rereplication","type":"exact"}],"termid":"FYPO:0007669"}


id: PBO:0028048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_cytoplasmic_interphase_microtubules","termid":"PBO:0028048"}


id: PBO:0004696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase (predicted)","termid":"PBO:0004696"}


id: FYPO:0006733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which movement of the CMG complex away from replication origins during DNA replication is normal.","definition_xrefs":["PomBase:mah","PMID:22718908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal CMG complex progression from replication origin","synonyms":[{"name":"normal CMG complex translocation from replication origin","type":"exact"},{"name":"normal replicative helicase progression from replication origin","type":"exact"}],"termid":"FYPO:0006733"}


id: PR:Q9C0Y7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Y7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB24D3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.07c","synonyms":[{"name":"Spom972h-SPAPB24D3.07c","type":"exact"}],"termid":"PR:Q9C0Y7"}


id: MONDO:0020578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Abnormally low level of 25-hydroxyvitamin D in the blood.","gene_count":0,"genotype_count":0,"name":"obsolete vitamin D deficiency (obsolete MONDO:0020578)","termid":"MONDO:0020578","xrefs":{"Monarch":{"xref_id":"0020578"}}}


id: PBO:0063289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 3","termid":"PBO:0063289"}


id: PBO:0067064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 89, pseudogene","termid":"PBO:0067064"}


id: SO:0000709
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A trans_splicing_acceptor_site which appends the 22nt SL2 RNA leader sequence to the 5' end of mRNAs. SL2 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_acceptor_site","termid":"SO:0000706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL2_acceptor_site","synonyms":[{"name":"SL2 acceptor site","type":"exact"}],"termid":"SO:0000709"}


id: PBO:0043869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich C-terminal 1","termid":"PBO:0043869"}


id: PBO:0018242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med13","termid":"PBO:0018242"}


id: GO:1900495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:1900494"},{"relation_name":"negatively_regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0006629","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"down regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"down regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"down-regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"down-regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"downregulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"downregulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"inhibition of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"inhibition of butyryl-CoA biosynthetic process from acetyl-CoA","type":"narrow"},{"name":"negative regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"}],"termid":"GO:1900495"}


id: GO:0009504
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nascent cell membrane and cell wall structure that forms between two daughter nuclei near the center of a dividing plant cell. It develops at the equatorial region of the phragmoplast. It grows outwards to join with the lateral walls and form two daughter cells.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cell plate","secondary_identifiers":["Wikipedia:Cell_plate"],"termid":"GO:0009504"}


id: PR:G2TRK8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.15","synonyms":[{"name":"Spom972h-new12","type":"exact"}],"termid":"PR:G2TRK8"}


id: GO:0002454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deletion of B cells by apoptotic process occurring as part of peripheral tolerance induction and B cell selection.","definition_xrefs":["GOC:mtg_apoptosis","ISBN:0781735149","GOC:jal","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell deletion","termid":"GO:0002516"},{"relation_name":"part_of","term_name":"peripheral B cell tolerance induction","termid":"GO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral B cell deletion","synonyms":[{"name":"peripheral B lymphocyte deletion","type":"exact"},{"name":"peripheral B-cell deletion","type":"exact"},{"name":"peripheral B-lymphocyte deletion","type":"exact"}],"termid":"GO:0002454"}


id: FYPO:0004641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CAAX-protein geranylgeranyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal CAAX-protein geranylgeranyltransferase activity","termid":"FYPO:0004640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased CAAX-protein geranylgeranyltransferase activity","synonyms":[{"name":"reduced CAAX-protein geranylgeranyltransferase activity","type":"exact"}],"termid":"FYPO:0004641"}


id: MONDO:0003822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary neoplasm of the urinary bladder in which the transitional cells form papillae. The papillary structures exhibit minimal architectural distortion and minimal atypia. Mitoses are infrequent. Patients are at an increased risk of developing new papillary lesions. Occasionally, the new lesions are urothelial carcinomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder papillary urothelial neoplasm","termid":"MONDO:0003442"},{"relation_name":"is_a","term_name":"urinary tract non-invasive transitional cell neoplasm","termid":"MONDO:0003755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-invasive bladder papillary urothelial neoplasm","secondary_identifiers":["NCIT:C39831","UMLS:C1518358","DOID:6239","MEDGEN:309424"],"synonyms":[{"name":"bladder PUNLMP","type":"exact"},{"name":"bladder papillary neoplasm of low malignant potential","type":"exact"},{"name":"non-invasive bladder papillary urothelial neoplasm","type":"exact"},{"name":"papillary urothelial neoplasm of low malignant potential","type":"exact"}],"termid":"MONDO:0003822","xrefs":{"Monarch":{"xref_id":"0003822"}}}


id: GO:1904649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fat cell apoptotic process.","definition_xrefs":["PMID:17024416","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"fat cell apoptotic process","termid":"GO:1904606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fat cell apoptotic process","synonyms":[{"name":"regulation of adipocyte apoptosis","type":"narrow"},{"name":"regulation of adipocyte apoptotic process","type":"exact"},{"name":"regulation of adipose cell apoptosis","type":"narrow"},{"name":"regulation of adipose cell apoptotic process","type":"exact"},{"name":"regulation of fat cell apoptosis","type":"narrow"}],"termid":"GO:1904649"}


id: MONDO:0100461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastrointestinal defects and immunodeficiency syndrome (obsolete MONDO:0100461)","termid":"MONDO:0100461","xrefs":{"Monarch":{"xref_id":"0100461"}}}


id: SO:0000393
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U4 small nuclear RNA (U4 snRNA) is a component of the major U2-dependent spliceosome. It forms a duplex with U6, and with each splicing round, it is displaced from U6 (and the spliceosome) in an ATP-dependent manner, allowing U6 to refold and create the active site for splicing catalysis. A recycling process involving protein Prp24 re-anneals U4 and U6.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U4_snRNA"],"synonyms":[{"name":"U4 small nuclear RNA","type":"exact"},{"name":"U4 snRNA","type":"exact"},{"name":"small nuclear RNA U4","type":"exact"},{"name":"snRNA U4","type":"exact"}],"termid":"SO:0000393"}


id: PBO:0077979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 2-1","termid":"PBO:0077979"}


id: PBO:0042004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 59","termid":"PBO:0042004"}


id: MONDO:0957456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336"],"is_obsolete":false,"name":"classical dermatomyositis","secondary_identifiers":["Orphanet:645613","UMLS:C5816707","MEDGEN:1843411"],"termid":"MONDO:0957456","xrefs":{"Monarch":{"xref_id":"0957456"}}}


id: GO:0018899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,2-dichloroethane, a major commodity chemical used, for example, in the manufacture of vinyl chloride.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2-dichloroethane metabolic process","secondary_identifiers":["UM-BBD_pathwayID:dce"],"synonyms":[{"name":"1,2-dichloroethane metabolism","type":"exact"}],"termid":"GO:0018899"}


id: GO:2001022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of response to DNA damage stimulus.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of response to DNA damage stimulus (obsolete GO:2001022)","synonyms":[{"name":"positive regulation of DNA damage response","type":"exact"},{"name":"positive regulation of cellular DNA damage response","type":"exact"},{"name":"positive regulation of cellular response to DNA damage stimulus","type":"exact"},{"name":"positive regulation of response to genotoxic stress","type":"exact"}],"termid":"GO:2001022"}


id: GO:1902849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuronal signal transduction.","definition_xrefs":["GOC:sjp","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of neuronal signal transduction","termid":"GO:1902847"},{"relation_name":"positively_regulates","term_name":"neuronal signal transduction","termid":"GO:0023041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of neuronal signal transduction","synonyms":[{"name":"activation of neuronal signal transduction","type":"narrow"},{"name":"up regulation of neuronal signal transduction","type":"exact"},{"name":"up-regulation of neuronal signal transduction","type":"exact"},{"name":"upregulation of neuronal signal transduction","type":"exact"}],"termid":"GO:1902849"}


id: PBO:0067654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 831, pseudogene","termid":"PBO:0067654"}


id: GO:0021960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in one half of the cerebral cortex towards target cells in the contralateral half. This axonal process is a member of those that make up the anterior commissure, a small midline fiber tract that lies at the anterior end of the corpus callosum.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","ISBN:0878937420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior commissure morphogenesis","termid":"GO:0021960"}


id: PBO:0075966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 7","termid":"PBO:0075966"}


id: PR:Q4ZGE1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8C9.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q4ZGE1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0618 protein C8C9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.19","synonyms":[{"name":"Spom972h-SPAC8C9.19","type":"exact"}],"termid":"PR:Q4ZGE1"}


id: GO:0018613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-fluorenone + 2 NADPH + O2 = 2 NADP+ + 3,4-dihydroxy-3,4-dihydro-9-fluorenone.","definition_xrefs":["UM-BBD_reactionID:r0409"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-fluorenone dioxygenase activity (obsolete GO:0018613)","termid":"GO:0018613"}


id: PBO:0052690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 14","termid":"PBO:0052690"}


id: FYPO:0006271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to floxuridine (5-fluoro-2'-deoxyuridine). Cells stop growing (and may die) at a concentration of floxuridine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to floxuridine","synonyms":[{"name":"hypersensitive to floxuridine","type":"exact"},{"name":"sensitive to 5-fluoro-2'-deoxyuridine","type":"exact"},{"name":"sensitive to 5-fluoro-2-deoxyuridine","type":"exact"},{"name":"sensitive to FUDR","type":"exact"},{"name":"sensitive to FdU","type":"exact"},{"name":"sensitive to floxuridin","type":"exact"},{"name":"sensitive to floxuridine during mitotic cell cycle","type":"related"},{"name":"sensitive to floxuridine during vegetative growth","type":"exact"}],"termid":"FYPO:0006271"}


id: PBO:0031314
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_zinc","termid":"PBO:0031314"}


id: PBO:0048315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 26","termid":"PBO:0048315"}


id: PBO:0068585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 36, pseudogene","termid":"PBO:0068585"}


id: PBO:0064384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 6","termid":"PBO:0064384"}


id: PBO:0063881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class K","termid":"PBO:0063881"}


id: PBO:0066504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X2","termid":"PBO:0066504"}


id: PBO:0082264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminopeptidase yscII; may have a role in obtaining leucine from dipeptide substrates; APE2 has a paralog, AAP1, that arose from the whole genome duplication","termid":"PBO:0082264"}


id: MONDO:0957203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked 111","secondary_identifiers":["MEDGEN:1840204","DOID:0060929","UMLS:C5829568","OMIM:301107"],"termid":"MONDO:0957203","xrefs":{"Monarch":{"xref_id":"0957203"}}}


id: PBO:0031819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_apoptosis","termid":"PBO:0031819"}


id: GO:0048144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of fibroblast cells, resulting in the expansion of the fibroblast population.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast proliferation","termid":"GO:0048144"}


id: PBO:0051403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 3, pseudogene","termid":"PBO:0051403"}


id: GO:0018569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hydroquinone + O2 = cis,trans-4-hydroxymuconic semialdehyde.","definition_xrefs":["UM-BBD_reactionID:r0228"],"gene_count":0,"genotype_count":0,"name":"obsolete hydroquinone 1,2-dioxygenase activity (obsolete GO:0018569)","termid":"GO:0018569"}


id: PBO:0066960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 262","termid":"PBO:0066960"}


id: MONDO:0015494
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007493"}]},"cv_name":"mondo","definition":"A dystonia (disease) that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"isolated dystonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:156159","GARD:19985","MEDGEN:1842310","UMLS:C5679608"],"synonyms":[{"name":"Pure dystonia","type":"exact"},{"name":"isolated dystonic disorder","type":"exact"},{"name":"nonsyndromic dystonia (disease)","type":"exact"},{"name":"nonsyndromic dystonic disorder","type":"exact"}],"termid":"MONDO:0015494","terms_by_termid":{"MONDO:0007493":null},"xrefs":{"Monarch":{"xref_id":"0015494"}}}


id: PBO:0088410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg9","termid":"PBO:0088410"}


id: SO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Crypton is a superfamily of DNA transposons that use tyrosine recombinase (YR) to cut and rejoin the recombining DNA molecules.","definition_xrefs":["PMID:22011512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crypton_YR_transposon","synonyms":[{"name":"Crypton YR transposon","type":"exact"},{"name":"Crypton transposon","type":"exact"},{"name":"DYC transposon","type":"exact"}],"termid":"SO:0002277"}


id: GO:2000595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of optic nerve formation","synonyms":[{"name":"regulation of CN II biosynthesis","type":"related"},{"name":"regulation of CN II formation","type":"related"}],"termid":"GO:2000595"}


id: PBO:0086872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative sterol transfer protein; localizes to puncta in the cortical ER; probable role in retrograde transport of sterols from the plasma membrane to the ER; one of six StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes; contains GRAM, StART-like (VASt) and two PH-like domains","termid":"PBO:0086872"}


id: GO:0018850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-chloro-2,5-dihydro-5-oxofuran-2-acetate = 3-chloro-cis,cis-muconate.","definition_xrefs":["EC:5.5.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chloromuconate cycloisomerase activity","secondary_identifiers":["RHEA:11032"],"synonyms":[{"name":"2-chloro-2,5-dihydro-5-oxofuran-2-acetate lyase (decyclizing)","type":"related"},{"name":"muconate cycloisomerase II activity","type":"related"}],"termid":"GO:0018850"}


id: MONDO:0004339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the tuberculum sellae.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sella turcica neoplasm","termid":"MONDO:0002720"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculum sellae meningioma","secondary_identifiers":["MEDGEN:277835","UMLS:C1336829","NCIT:C5284","DOID:7713"],"synonyms":[{"name":"meningioma of the tuberculum sellae","type":"exact"},{"name":"meningioma of tuberculum sellae","type":"exact"},{"name":"sella turcica neoplasm of tuberculum sellae","type":"exact"},{"name":"tuberculum sellae sella turcica neoplasm","type":"exact"}],"termid":"MONDO:0004339","xrefs":{"Monarch":{"xref_id":"0004339"}}}


id: PBO:0085350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid-binding hydrophilin; essential to overcome desiccation-rehydration process; expression is induced by osmotic stress; SIP18 has a paralog, GRE1, that arose from the whole genome duplication","termid":"PBO:0085350"}


id: PBO:0049420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate kinase 2","termid":"PBO:0049420"}


id: PR:O42916
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16A3.10 gene.","definition_xrefs":["UniProtKB:O42916","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipid acyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.10","synonyms":[{"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AGPAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"LPAAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"LPCAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"LPEAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"LPLAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC16A3.10","type":"exact"},{"name":"lysophosphatidic acid acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lysophosphatidylcholine acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lysophosphatidylethanolamine acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42916"}


id: PATO:0000521
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000521 drug sensitivity value (obsolete PATO:0000521)","termid":"PATO:0000521"}


id: FYPO:0002942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid, and has a larger volume than normal, when the cell is in G0 phase. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid cell","termid":"FYPO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"swollen spheroid cell during G0","synonyms":[{"name":"enlarged spheroid cell during G0","type":"related"},{"name":"enlarged volume spheroid cell during G0","type":"exact"},{"name":"large spheroid cell during G0","type":"related"},{"name":"spheroid cell with increased cell size during G0","type":"related"},{"name":"spheroid cell with increased cell volume during G0","type":"exact"},{"name":"swollen rounded cell during G0","type":"exact"},{"name":"swollen spheroid cell during cell quiescence","type":"exact"},{"name":"swollen spheroid cell during quiescence","type":"exact"}],"termid":"FYPO:0002942"}


id: PBO:0046077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 2","termid":"PBO:0046077"}


id: GO:0021785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone is directed to a specific target site. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GO_REF:0000021","PMID:14699587","GOC:jid","GOC:dgh","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor neuron axon guidance","termid":"GO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomotor neuron axon guidance","synonyms":[{"name":"BMN axon guidance","type":"exact"},{"name":"branchial motor axon guidance","type":"exact"},{"name":"special visceral motor neuron axon guidance","type":"exact"}],"termid":"GO:0021785"}


id: PBO:0042675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 9","termid":"PBO:0042675"}


id: PBO:0069731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1012, pseudogene","termid":"PBO:0069731"}


id: PBO:0046389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 antisense RNA 1","termid":"PBO:0046389"}


id: MONDO:0014888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the SAMD9 gene, encoding sterile alpha motif domain-containing protein 9A. It is a syndromic condition comprising myelodysplasia, infection, restriction of growth, adrenal hypoplasia, genital abnormalities, and enteropathy.","definition_xrefs":["NCIT:C147530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIRAGE syndrome","secondary_identifiers":["MEDGEN:924576","UMLS:C4284088","OMIM:617053","GARD:13108","Orphanet:494433"],"synonyms":[{"name":"MIRAGE","type":"exact"},{"name":"mirage","type":"exact"},{"name":"mirage syndrome","type":"exact"},{"name":"myelodysplasia, infection, restriction of Growth, adrenal Hypoplasia, genital phenotypes, and enteropathy","type":"exact"},{"name":"myelodysplasia-infection-restriction of growth-adrenal hypoplasia-genital anomalies-enteropathy syndrome","type":"exact"},{"name":"myelodysplasia-infection-restriction of growth-adrenal hypoplasia-genital phenotypes-enteropathy syndrome","type":"exact"}],"termid":"MONDO:0014888","xrefs":{"Monarch":{"xref_id":"0014888"}}}


id: PBO:0005789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polynucleotide kinase Grc3 (predicted)","termid":"PBO:0005789"}


id: GO:0009534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Sac-like membranous structures (cisternae) in a chloroplast combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["ISBN:0943088399","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid","termid":"GO:0031976"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast thylakoid","termid":"GO:0009534"}


id: PBO:0030695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione-disulfide_reductase_activity","termid":"PBO:0030695"}


id: PBO:0084500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for meiotic recombination; makes DNA double-strand breaks (DSB) during meiotic recombination, homolog pairing, and synaptonemal complex formation; role in meiotic DSB formation involves a topo-II-like transesterase mechanism; forms monotetrameric complex; covalently linked to DSBs through a 5'-phosphodiester bond between a catalytic tyrosine (Y135) and the DSB 5'- end; sequence similarity to a topo VI subunit from archaea, fission yeast rec12 and human SPO11","termid":"PBO:0084500"}


id: GO:0045874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the sevenless signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of sevenless signaling pathway","termid":"GO:0045501"},{"relation_name":"positively_regulates","term_name":"sevenless signaling pathway","termid":"GO:0045500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of sevenless signaling pathway","synonyms":[{"name":"activation of sevenless signaling pathway","type":"narrow"},{"name":"positive regulation of sev signaling pathway","type":"exact"},{"name":"positive regulation of sevenless signalling pathway","type":"exact"},{"name":"stimulation of sevenless signaling pathway","type":"narrow"},{"name":"up regulation of sevenless signaling pathway","type":"exact"},{"name":"up-regulation of sevenless signaling pathway","type":"exact"},{"name":"upregulation of sevenless signaling pathway","type":"exact"}],"termid":"GO:0045874"}


id: MONDO:1011100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephropathy characterized by renal tubular necrosis with extensive oxalate crystal deposition that occurs in dogs due to a mutation in the AGXT gene.","definition_xrefs":["PMID:22486513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"nephropathy, dog","termid":"MONDO:1012186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hyperoxaluria, AGXT-related, dog","secondary_identifiers":["OMIA:001672-9615"],"synonyms":[{"name":"primary hyperoxaluria type I (Oxalosis I), dog","type":"related"}],"termid":"MONDO:1011100","xrefs":{"Monarch":{"xref_id":"1011100"}}}


id: GO:0061695
data:
  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id: PBO:0060189
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id: MONDO:0100205
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus type 4.","definition_xrefs":["PMID:27197630","MONDO:patterns/infectious_disease_by_agent","PMID:21636318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 4 infectious disease","synonyms":[{"name":"human rubulavirus 4 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 4","type":"exact"},{"name":"infection caused by parainfluenza virus 4","type":"related"},{"name":"infection due to human parainfluenza virus 4","type":"exact"},{"name":"infection due to parainfluenza virus 4","type":"related"}],"termid":"MONDO:0100205","xrefs":{"Monarch":{"xref_id":"0100205"}}}


id: PBO:0056813
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id: PBO:0042225
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNT2 antisense RNA 1","termid":"PBO:0042225"}


id: MONDO:0850284
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id: GO:1905941
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id: PBO:0074997
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id: PBO:0057665
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id: GO:0047965
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + mucus glycoprotein = CoA + O-palmitoylglycoprotein.","definition_xrefs":["EC:2.3.1.142","MetaCyc:GLYCOPROTEIN-O-FATTY-ACYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoyltransferase activity","termid":"GO:0016416"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"glycoprotein O-fatty-acyltransferase activity","synonyms":[{"name":"fatty-acyl-CoA:mucus-glycoprotein fatty-acyltransferase activity","type":"related"},{"name":"protein acyltransferase activity","type":"related"}],"termid":"GO:0047965"}


id: PBO:0087004
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id: GO:0015824
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proline, pyrrolidine-2-carboxylic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"proline transport","synonyms":[{"name":"L-proline transport","type":"narrow"}],"termid":"GO:0015824"}


id: GO:0008449
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 6-sulfate group of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate.","definition_xrefs":["EC:3.1.6.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"N-acetylglucosamine-6-sulfatase activity","secondary_identifiers":["Reactome:R-HSA-2263495","MetaCyc:3.1.6.14-RXN","Reactome:R-HSA-1638032"],"synonyms":[{"name":"2-acetamido-2-deoxy-D-glucose 6-sulfate sulfatase activity","type":"related"},{"name":"N-acetyl-D-glucosamine-6-sulfate 6-sulfohydrolase activity","type":"related"},{"name":"N-acetylglucosamine 6-sulfate sulfatase activity","type":"related"},{"name":"N-acetylglucosamine-6-sulphatase activity","type":"exact"},{"name":"O,N-disulfate O-sulfohydrolase activity","type":"related"},{"name":"acetylglucosamine 6-sulfatase activity","type":"related"},{"name":"chondroitinsulfatase","type":"broad"},{"name":"glucosamine-6-sulfatase activity","type":"related"}],"termid":"GO:0008449"}


id: GO:0005859
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A filament of myosin found in a muscle cell of any type.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin II complex","termid":"GO:0016460"},{"relation_name":"part_of","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0032991","GO:0015629","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"muscle myosin complex","termid":"GO:0005859"}


id: PATO:0002257
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id: GO:0003858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + H+ + NADH.","definition_xrefs":["EC:1.1.1.30","RHEA:20521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase activity","secondary_identifiers":["MetaCyc:3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN","Reactome:R-HSA-5696457","Reactome:R-HSA-73912","Reactome:R-HSA-73920","KEGG_REACTION:R01361"],"synonyms":[{"name":"D-beta-hydroxybutyrate dehydrogenase activity","type":"related"}],"termid":"GO:0003858"}


id: PBO:0080884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N6-threonylcarbamoyltransferase domain containing","termid":"PBO:0080884"}


id: PBO:0086369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aminopeptidase; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to the vacuole","termid":"PBO:0086369"}


id: PBO:0045708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrotelin","termid":"PBO:0045708"}


id: MONDO:1012509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative suspensory ligament desmitis, non-human animal","termid":"MONDO:1011773"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative suspensory ligament desmitis, horse","secondary_identifiers":["OMIA:002086-9796"],"termid":"MONDO:1012509","xrefs":{"Monarch":{"xref_id":"1012509"}}}


id: PBO:0005168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cargo receptor for soluble proteins (predicted)","termid":"PBO:0005168"}


id: GO:0071570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cement gland over time, from its formation to the mature structure. The cement gland is a simple mucus-secreting organ positioned at the anterior of amphibious embryos. The cement gland attaches the newly hatched embryo to a support before the hatchling can swim well or feed.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cement gland development","termid":"GO:0071570"}


id: GO:0038107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a nodal protein binding of to an activin receptor on the surface of a target cell, which contributes to the establishment of an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["GOC:vk","GOC:BHF","PMID:17287255","PMID:12857784","PMID:20413706"],"gene_count":0,"genotype_count":0,"name":"obsolete nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:0038107)","synonyms":[{"name":"nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter by nodal signaling pathway, involved in determination of left/right symmetry","type":"exact"}],"termid":"GO:0038107"}


id: GO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 2S ribosomal RNA (rRNA) molecule into a mature 2S rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"maturation of 2S rRNA","termid":"GO:0000475"}


id: MONDO:1011852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurogenic muscular atrophy, non-human animal","secondary_identifiers":["OMIA:000719"],"termid":"MONDO:1011852","xrefs":{"Monarch":{"xref_id":"1011852"}}}


id: MONDO:0000827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus salmonella.","definition_xrefs":["MESH:D012480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salmonellosis","secondary_identifiers":["ICD9:003.9","SCTID:302231008","MedDRA:10039447","MEDGEN:48542","DOID:0060859","UMLS:C0036117","ICD9:003.8","Orphanet:795","ICD9:003.0","NCIT:C157974"],"synonyms":[{"name":"Salmonella infection","type":"exact"},{"name":"infections, Salmonella","type":"related"},{"name":"rare form of salmonellosis","type":"exact"}],"termid":"MONDO:0000827","xrefs":{"Monarch":{"xref_id":"0000827"}}}


id: PBO:0086494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative phosphomutase; contains a region homologous to the active site of phosphomutases; overexpression suppresses the histidine auxotrophy of an ade3 ade16 ade17 triple mutant and the temperature sensitivity of a tps2 mutant","termid":"PBO:0086494"}


id: GO:1902876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of embryonic pattern specification.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:16872597","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of embryonic pattern specification","termid":"GO:1902875"},{"relation_name":"negatively_regulates","term_name":"embryonic pattern specification","termid":"GO:0009880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic pattern specification","synonyms":[{"name":"down regulation of embryonic pattern specification","type":"exact"},{"name":"down regulation of ventral/lateral system","type":"related"},{"name":"down-regulation of embryonic pattern specification","type":"exact"},{"name":"down-regulation of ventral/lateral system","type":"related"},{"name":"downregulation of embryonic pattern specification","type":"exact"},{"name":"downregulation of ventral/lateral system","type":"related"},{"name":"inhibition of embryonic pattern specification","type":"narrow"},{"name":"inhibition of ventral/lateral system","type":"related"},{"name":"negative regulation of ventral/lateral system","type":"related"}],"termid":"GO:1902876"}


id: PBO:0084635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for synthesis of diphthamide; diphthamide is a modified histidine residue of translation elongation factor 2 (Eft1p or Eft2p); not essential for viability; GFP-Dph5p fusion protein localizes to the cytoplasm","termid":"PBO:0084635"}


id: MONDO:0004307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition characterized by diffuse spread of sarcoma cells throughout the meninges. The neoplastic cells are derived from meningeal connective tissue. Clinically, this disorder may present as a fulminant pachymeningitis and/or encephalitis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningeal sarcoma","termid":"MONDO:0004308"},{"relation_name":"is_a","term_name":"sarcomatosis","termid":"MONDO:0004309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcomatosis of the meninges","secondary_identifiers":["NCIT:C4334","UMLS:C0334612","DOID:7613","ICDO:9539/3","MEDGEN:83175"],"synonyms":[{"name":"meningeal cluster sarcomatosis","type":"exact"},{"name":"meningeal sarcomatosis","type":"exact"},{"name":"meningeal sarcomatosis (morphologic abnormality)","type":"exact"},{"name":"meninges sarcomatosis","type":"exact"},{"name":"sarcomatosis of meninges","type":"exact"},{"name":"sarcomatosis of the meninges","type":"exact"}],"termid":"MONDO:0004307","xrefs":{"Monarch":{"xref_id":"0004307"}}}


id: PBO:0004286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,3-beta-glucosidase Exg3","termid":"PBO:0004286"}


id: GO:0004277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins, including fibronectin, type IV collagen and nucleolin. Preferential cleavage: Arg-Xaa > Lys-Xaa > Phe-Xaa in small molecule substrates.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete granzyme A activity (obsolete GO:0004277)","synonyms":[{"name":"CTLA3","type":"related"},{"name":"HuTPS","type":"related"},{"name":"T-cell associated protease 1","type":"related"},{"name":"T-cell derived serine proteinase","type":"narrow"},{"name":"TSP-1","type":"related"},{"name":"cytotoxic T lymphocyte serine protease","type":"narrow"},{"name":"cytotoxic T-lymphocyte proteinase 1 activity","type":"narrow"},{"name":"granzyme A activity","type":"exact"}],"termid":"GO:0004277"}


id: PR:Q9UUN5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prenylated Rab acceptor protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04300","PANTHER:PTHR19317:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRA1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.02c","secondary_identifiers":["UniProtKB:Q9UUN5"],"synonyms":[{"name":"Spom972h-RABAC1","type":"exact"}],"termid":"PR:Q9UUN5"}


id: MONDO:0000264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Pontiac fever (obsolete MONDO:0000264)","termid":"MONDO:0000264","xrefs":{"Monarch":{"xref_id":"0000264"}}}


id: PBO:0082577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin transglycosylase; functions in the transfer of chitin to beta(1-6) and beta(1-3) glucans in the cell wall; similar to and functionally redundant with Crh1; glycosylphosphatidylinositol (GPI)-anchored protein localized to bud neck","termid":"PBO:0082577"}


id: PBO:0044215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTTN divergent transcript","termid":"PBO:0044215"}


id: GO:0018307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of part of an enzyme to form the active site.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation (obsolete GO:0018307)","termid":"GO:0018307"}


id: PBO:0108890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 3","termid":"PBO:0108890"}


id: MONDO:0014122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myofibromatosis in which the cause of the disease is a mutation in the NOTCH3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile myofibromatosis","termid":"MONDO:0016824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myofibromatosis, infantile, 2","secondary_identifiers":["GARD:15939","UMLS:C3809084","OMIM:615293","MEDGEN:815414"],"synonyms":[{"name":"IMF2","type":"related"},{"name":"NOTCH3 myofibromatosis","type":"exact"},{"name":"myofibromatosis caused by mutation in NOTCH3","type":"exact"},{"name":"myofibromatosis, infantile 2","type":"exact"},{"name":"myofibromatosis, infantile, 2","type":"exact"},{"name":"myofibromatosis, infantile, type 2","type":"exact"}],"termid":"MONDO:0014122","xrefs":{"Monarch":{"xref_id":"0014122"}}}


id: PBO:0004406
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.61","termid":"PBO:0004406"}


id: PBO:0029775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_branched,_curved,_elongated_cells_(obsolete_FYPO:0002464)","termid":"PBO:0029775"}


id: GO:0006996
data:
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id: GO:0000437
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id: GO:0034453
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  {"annotated_genes":["SJAG_03835","SJAG_01613","SJAG_03062","SJAG_01546","SJAG_03116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990734"},{"annotations":[108485,98725,96271,102534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"microtubule anchoring","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034453","terms_by_termid":{"GO:1990734":null,"GO:1990810":null}}


id: PBO:0086707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; member of the multi-drug and toxin extrusion (MATE) family of the multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily","termid":"PBO:0086707"}


id: MONDO:0001246
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of infectious diseases that include epidemic typhus, scrub typhus and murine typhus.","definition_xrefs":["Wikipedia:Typhus"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Rickettsiaceae infectious disease","termid":"MONDO:0006927"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"typhus","secondary_identifiers":["DOID:11256","ICD9:081.0","ICD9:081.9","SCTID:240613006","icd11.foundation:292650041","ICD9:080","UMLS:C0041471","GARD:19829","MEDGEN:11976","Orphanet:102023","EFO:0009117"],"synonyms":[{"name":"European typhus","type":"related"},{"name":"Mexican typhus","type":"related"},{"name":"Moscow typhus","type":"related"},{"name":"Urban typhus","type":"related"},{"name":"classical typhus","type":"related"},{"name":"classical typhus (fever)","type":"related"},{"name":"endemic flea-borne typhus","type":"narrow"},{"name":"endemic typhus fever","type":"narrow"},{"name":"epidemic (louse-borne) typhus","type":"related"},{"name":"epidemic louse-borne typhus","type":"narrow"},{"name":"epidemic louse-borne typhus fever due to Rickettsia prowazekii","type":"related"},{"name":"exanthematic typhus fever","type":"narrow"},{"name":"exanthematous typhus","type":"related"},{"name":"famine fever","type":"related"},{"name":"flea typhus","type":"narrow"},{"name":"flea-borne rickettsiosis","type":"related"},{"name":"flea-borne typhus","type":"related"},{"name":"gaol fever","type":"related"},{"name":"hospital fever","type":"related"},{"name":"jail fever","type":"related"},{"name":"louse-borne [epidemic] typhus","type":"narrow"},{"name":"louse-borne rickettsiosis","type":"related"},{"name":"louse-borne typhus","type":"related"},{"name":"murine [endemic] typhus","type":"narrow"},{"name":"murine typhus","type":"related"},{"name":"petechial fever","type":"related"},{"name":"prison fever","type":"related"},{"name":"rat flea typhus","type":"related"},{"name":"ship fever","type":"related"},{"name":"shop typhus","type":"related"},{"name":"typhus exanthematique","type":"related"},{"name":"typhus fever","type":"exact"},{"name":"typhus-group rickettsiae disease","type":"exact"},{"name":"typhus-group rickettsiosis","type":"exact"}],"termid":"MONDO:0001246","xrefs":{"Monarch":{"xref_id":"0001246"}}}


id: RO:0002382
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id: PBO:0056839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT4 family member D","termid":"PBO:0056839"}


id: MONDO:0001884
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a abducens nerve.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"abducens nerve disorder","termid":"MONDO:0020594"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abducens nerve neoplasm","secondary_identifiers":["MEDGEN:224732","DOID:14125","SCTID:126972009","ICD9:239.7","NCIT:C5826","UMLS:C1263898"],"synonyms":[{"name":"VIth cranial nerve neoplasms","type":"exact"},{"name":"VIth cranial nerve tumors","type":"exact"},{"name":"VIth cranial nerve tumours","type":"exact"},{"name":"abducens nerve neoplasm (disease)","type":"exact"},{"name":"abducens nerve neoplasms","type":"exact"},{"name":"abducens nerve tumor","type":"exact"},{"name":"abducens nerve tumors","type":"exact"},{"name":"abducens nerve tumour","type":"exact"},{"name":"abducens nerve tumours","type":"exact"},{"name":"neoplasm of abducens nerve","type":"exact"},{"name":"neoplasm of sixth cranial nerve","type":"exact"},{"name":"neoplasm of the abducens nerve","type":"exact"},{"name":"neoplasm of the sixth cranial nerve","type":"exact"},{"name":"sixth cranial nerve neoplasm","type":"exact"},{"name":"sixth cranial nerve neoplasms","type":"exact"},{"name":"sixth cranial nerve tumor","type":"exact"},{"name":"sixth cranial nerve tumors","type":"exact"},{"name":"sixth cranial nerve tumour","type":"exact"},{"name":"sixth cranial nerve tumours","type":"exact"},{"name":"tumor of abducens nerve","type":"exact"},{"name":"tumor of sixth cranial nerve","type":"exact"},{"name":"tumor of the abducens nerve","type":"exact"},{"name":"tumor of the sixth cranial nerve","type":"exact"},{"name":"tumour of abducens nerve","type":"exact"},{"name":"tumour of sixth cranial nerve","type":"exact"},{"name":"tumour of the abducens nerve","type":"exact"},{"name":"tumour of the sixth cranial nerve","type":"exact"}],"termid":"MONDO:0001884","xrefs":{"Monarch":{"xref_id":"0001884"}}}


id: PBO:0080853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS domain containing 2","termid":"PBO:0080853"}


id: MONDO:0013853
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  {"annotated_genes":["SJAG_04321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85839],"is_not":false,"summary":null,"term":"MONDO:0013853"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the EXOSC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 1","termid":"MONDO:0016396"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066","MONDO:0020022","MONDO:0005559"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 1B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553449","MEDGEN:766363","OMIM:614678","DOID:0060266","GARD:15834"],"synonyms":[{"name":"EXOSC3 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"PCH1B","type":"related"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in EXOSC3","type":"exact"},{"name":"pontocerebellar hypoplasia type 1B","type":"exact"},{"name":"pontocerebellar hypoplasia, type 1B","type":"related"}],"termid":"MONDO:0013853","terms_by_termid":{"MONDO:0013853":null},"xrefs":{"Monarch":{"xref_id":"0013853"}}}


id: MONDO:0016043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated cleft lip is a fissure type embryopathy extending from the upper lip to the nasal base.","definition_xrefs":["Orphanet:199302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft lip","termid":"MONDO:0004747"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated cleft lip","secondary_identifiers":["UMLS:C0008924","icd11.foundation:172183323","GARD:17091","MedDRA:10009259","MEDGEN:40327"],"synonyms":[{"name":"isolated cleft lip (disease)","type":"exact"},{"name":"nonsyndromic cleft lip (disease)","type":"exact"}],"termid":"MONDO:0016043","xrefs":{"Monarch":{"xref_id":"0016043"}}}


id: PBO:0062305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 2","termid":"PBO:0062305"}


id: MONDO:0800485
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any overgrowth syndrome where the cause of the disease is a gain-of-function variant in the AKT3 gene.","definition_xrefs":["PMID:28969385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT3-related overgrowth spectrum","termid":"MONDO:0800485","xrefs":{"Monarch":{"xref_id":"0800485"}}}


id: GO:0120221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the planar beating pattern of ciliary movement pattern. Connection between the outer doublets and the central pair via the radial spokes constrains ciliary movement to the planar beating pattern. Cilia that lack this connection, such as those in the embryonic node or Kupfer's vesicle, display radial movement.","definition_xrefs":["GOC:krc","PMID:26506310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium movement","termid":"GO:0003352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of ciliary planar beating movement pattern","termid":"GO:0120221"}


id: GO:0051581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a neurotransmitter into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter transport","termid":"GO:0051589"},{"relation_name":"negatively_regulates","term_name":"neurotransmitter uptake","termid":"GO:0001504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of neurotransmitter uptake","synonyms":[{"name":"down regulation of neurotransmitter uptake","type":"exact"},{"name":"down-regulation of neurotransmitter uptake","type":"exact"},{"name":"downregulation of neurotransmitter uptake","type":"exact"},{"name":"negative regulation of neurotransmitter import","type":"exact"}],"termid":"GO:0051581"}


id: GO:0046048
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  {"annotated_genes":["SJAG_03676","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[113399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP, uridine (5'-)diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UDP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UDP metabolism","type":"exact"}],"termid":"GO:0046048","terms_by_termid":{"GO:0006225":null,"GO:0006256":null}}


id: PBO:0084661
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 2' O-ribose methyltransferase; required for methylation of U(2791) in 21S rRNA; MRM2 deletion confers thermosensitive respiration and loss of mitochondrial DNA; has similarity to Spb1p and Trm7p, and to E. coli FtsJ/RrmJ","termid":"PBO:0084661"}


id: PBO:0052931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-3","termid":"PBO:0052931"}


id: PBO:0079798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B7","termid":"PBO:0079798"}


id: PBO:0069751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1034, pseudogene","termid":"PBO:0069751"}


id: GO:0031804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 7 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 7 metabotropic glutamate receptor binding","synonyms":[{"name":"type 7 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031804"}


id: GO:0035914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle cell, a somatic cell located in skeletal muscle.","definition_xrefs":["GOC:BHF","GOC:vk","CL:0000188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle cell differentiation","termid":"GO:0035914"}


id: GO:1904540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycolytic process through fructose-6-phosphate.","definition_xrefs":["GOC:dph","ISBN:0201090910","ISBN:0879010479","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycolytic process","termid":"GO:0045821"},{"relation_name":"is_a","term_name":"regulation of glycolytic process through fructose-6-phosphate","termid":"GO:1904538"},{"relation_name":"positively_regulates","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0055086","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glycolytic process through fructose-6-phosphate","synonyms":[{"name":"activation of glycolysis through fructose-6-phosphate","type":"narrow"},{"name":"activation of glycolytic process through fructose-6-phosphate","type":"narrow"},{"name":"positive regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"up regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"up regulation of glycolytic process through fructose-6-phosphate","type":"exact"},{"name":"up-regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"up-regulation of glycolytic process through fructose-6-phosphate","type":"exact"},{"name":"upregulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"upregulation of glycolytic process through fructose-6-phosphate","type":"exact"}],"termid":"GO:1904540"}


id: MONDO:0001384
data:
  {"annotated_genes":["SJAG_03233","SJAG_04553"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032941"},{"annotations":[85573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012154"}]},"cv_name":"mondo","definition":"The condition in which the individual does not see far distances clearly.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"refractive error","termid":"MONDO:0004892"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03233":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:367.1","icd11.foundation:1666440799","MEDGEN:44558","DOID:11830","HP:0000545","SCTID:57190000","UMLS:C0027092","ICD10CM:H52.1","MESH:D009216","OMIMPS:160700"],"synonyms":[{"name":"myopia","type":"exact"},{"name":"myopia (disease)","type":"exact"},{"name":"near vision","type":"exact"},{"name":"near-sightedness","type":"exact"},{"name":"short-sightedness","type":"exact"}],"termid":"MONDO:0001384","terms_by_termid":{"MONDO:0012154":null,"MONDO:0032941":null},"xrefs":{"Monarch":{"xref_id":"0001384"}}}


id: PBO:0028345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_CENP-A_containing_chromatin","termid":"PBO:0028345"}


id: GO:0071079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha2-beta1 integrin complex bound to the cartilage matrix protein chondroadherin.","definition_xrefs":["PMID:9281592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha2-beta1 integrin-chondroadherin complex","synonyms":[{"name":"ITGA2-ITGB1-CHAD complex","type":"narrow"}],"termid":"GO:0071079"}


id: SO:1000005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When no simple or well defined DNA mutation event describes the observed DNA change, the keyword \\\"complex\\\" should be used. Usually there are multiple equally plausible explanations for the change.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substitution","termid":"SO:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_substitution","synonyms":[{"name":"complex substitution","type":"exact"}],"termid":"SO:1000005"}


id: GO:0008634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level.","definition_xrefs":["GOC:tb","GOC:mtg_apoptosis","GOC:go_curators","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of survival gene product expression (obsolete GO:0008634)","synonyms":[{"name":"down regulation of survival gene product activity","type":"broad"},{"name":"down-regulation of survival gene product activity","type":"broad"},{"name":"downregulation of survival gene product activity","type":"broad"},{"name":"inhibition of survival gene product activity","type":"narrow"},{"name":"negative regulation of survival gene product activity","type":"broad"},{"name":"negative regulation of survival gene product expression","type":"exact"},{"name":"negative regulation of survival gene products","type":"broad"}],"termid":"GO:0008634"}


id: SO:0000021
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An internal RNA loop where one of the strands includes more bases than the corresponding region on the other strand.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_internal_loop","termid":"SO:0000020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymmetric_RNA_internal_loop","synonyms":[{"name":"asymmetric RNA internal loop","type":"exact"}],"termid":"SO:0000021"}


id: GO:0050245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + quercitrin = L-rhamnose + quercetin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete quercitrinase activity (obsolete GO:0050245)","termid":"GO:0050245"}


id: PBO:0017046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam12","termid":"PBO:0017046"}


id: PBO:0005876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Methionine, mitochondrial","termid":"PBO:0005876"}


id: GO:0099141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to protozoan","termid":"GO:0001562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to protozoan","termid":"GO:0099141"}


id: MONDO:0009050
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86259],"is_not":false,"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"Cushing's syndrome due to abnormally high secretion of adrenocorticotropic hormone (ACTH) from the pituitary gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"functioning pituitary gland adenoma","termid":"MONDO:0003429"},{"relation_name":"is_a","term_name":"familial isolated pituitary adenoma","termid":"MONDO:0017824"},{"relation_name":"is_a","term_name":"ACTH-dependent Cushing syndrome","termid":"MONDO:0020528"},{"relation_name":"is_a","term_name":"adrenal gland neoplasm","termid":"MONDO:0021227"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"Cushing disease due to pituitary adenoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D049913","NCIT:C7462","GARD:12867","ICD10CM:E24.0","MESH:D047748","NCIT:C113210","SCTID:254958004","ICD10CM:D35.2","DOID:7004","NANDO:2200350","OMIM:219090","MedDRA:10035109","NANDO:1200379","icd11.foundation:380861892","MEDGEN:66381","UMLS:C0221406","Orphanet:96253"],"synonyms":[{"name":"ACTH producing pituitary adenoma","type":"exact"},{"name":"ACTH-secreting pituitary adenoma","type":"related"},{"name":"Corticotropinoma","type":"related"},{"name":"Cushing disease","type":"related"},{"name":"Cushing disease, pituitary","type":"exact"},{"name":"Cushing's disease","type":"related"},{"name":"PITA4","type":"exact"},{"name":"corticotroph adenoma","type":"related"},{"name":"corticotroph pituitary adenoma","type":"exact"},{"name":"pituitary adenoma 4, ACTH-secreting","type":"exact"},{"name":"pituitary adenoma 4, ACTH-secreting, somatic","type":"exact"},{"name":"pituitary adenoma, ACTH-secreting","type":"exact"},{"name":"pituitary corticotroph micro-adenoma","type":"exact"},{"name":"pituitary dependent Cushing syndrome","type":"exact"},{"name":"pituitary-dependent Cushing syndrome","type":"exact"}],"termid":"MONDO:0009050","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0009050"}}}


id: FYPO:0005254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tamoxifen.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on tamoxifen","synonyms":[{"name":"normal cell population growth in presence of tamoxifen","type":"exact"},{"name":"normal cell population growth on tamoxifen","type":"exact"},{"name":"normal cellular response to tamoxifen","type":"related"},{"name":"normal vegetative cell population growth on tamoxifen","type":"exact"}],"termid":"FYPO:0005254"}


id: GO:0007246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of a MAP kinase kinase in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK (mating sensu Saccharomyces) (obsolete GO:0007246)","synonyms":[{"name":"activation of MAPKK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007246"}


id: PBO:0079595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 E1","termid":"PBO:0079595"}


id: MONDO:0023297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Guttate psoriasis is a skin condition in which small, red, and scaly teardrop-shaped spots appear on the arms, legs, and middle of the body.It is a relatively uncommon form of psoriasis. The condition often develops very suddenly, and is usually triggered by an infection (e.g., strep throat, bacteria infection, upper respiratory infections or other viral infections). Other triggers include injury to the skin, including cuts, burns, and insect bites, certain malarial and heart medications, stress, sunburn, and excessive alcohol consumption. Treatment depends on the severity of the symptoms, ranging from at-home over the counter remedies to medicines that suppress the body's immunesystem to sunlight and phototherapy.","definition_xrefs":["GARD:0010569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis","termid":"MONDO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"guttate psoriasis","secondary_identifiers":["ICD10CM:L40.4","icd11.foundation:1202062855","MEDGEN:91004","UMLS:C0343052","ICD9:696.1","SCTID:37042000"],"synonyms":[{"name":"guttate psoriasis","type":"exact"},{"name":"psoriasis guttata","type":"related"},{"name":"psoriasis guttate","type":"related"}],"termid":"MONDO:0023297","xrefs":{"Monarch":{"xref_id":"0023297"}}}


id: PBO:0086552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL034C is not an essential gene","termid":"PBO:0086552"}


id: PBO:0005445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap113","termid":"PBO:0005445"}


id: MONDO:0013519
data:
  {"annotated_genes":["SJAG_00083"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84999],"is_not":false,"summary":null,"term":"MONDO:0013519"}]},"cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal recessive mutation of NOLA2 on chromosome 5q35.3.","definition_xrefs":["DOID:0070017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00083":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3151441","GARD:15739","OMIM:613987","MEDGEN:462791","NCIT:C176926"],"synonyms":[{"name":"DKCB2","type":"exact"},{"name":"autosomal recessive dyskeratosis congenita 2","type":"related"},{"name":"dyskeratosis congenita, autosomal recessive 2","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive type 2","type":"exact"}],"termid":"MONDO:0013519","terms_by_termid":{"MONDO:0013519":null},"xrefs":{"Monarch":{"xref_id":"0013519"}}}


id: GO:0036527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a sugar or dicarbonyl from an arginine residue of a glycated protein.","definition_xrefs":["PMID:14568004","PMID:25416785","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine modification","termid":"GO:0018195"},{"relation_name":"is_a","term_name":"protein deglycation","termid":"GO:0036525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine deglycation","synonyms":[{"name":"deglycation of N-acetylarginine","type":"related"}],"termid":"GO:0036527"}


id: PBO:0113059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of small ribosomal subunit (SSU) processome; interacts with the U3 snoRNA (Snr17a/b); involved in rRNA processing and maturation; required post-transcriptionally for efficient retrotransposition; absence results in decreased Ty1 Gag:GFP protein levels; originally isolated as bud-site selection mutant that displays a random budding pattern; ortholog of human NOL7","termid":"PBO:0113059"}


id: PBO:0065339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prune exopolyphosphatase 1","termid":"PBO:0065339"}


id: PBO:0089790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACC protein Alp7","termid":"PBO:0089790"}


id: GO:0141075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:29924996","PMID:27437422","PMID:22919663","PMID:20624917","PMID:31413201"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression of host JAK-STAT cascade (obsolete GO:0141075)","synonyms":[{"name":"disruption of host JAK-STAT cascade","type":"exact"},{"name":"down-regulation of host JAK-STAT cascade","type":"exact"},{"name":"downregulation of host JAK-STAT cascade","type":"exact"},{"name":"inhibition of host JAK-STAT cascade","type":"narrow"},{"name":"negative regulation of host JAK-STAT cascade","type":"exact"},{"name":"suppression of host JAK-STAT cascade","type":"exact"},{"name":"symbiont-mediated suppression of host JAK-STAT cascade","type":"related"}],"termid":"GO:0141075"}


id: MONDO:0700034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 13 in which the presence of an extra copy of chromosome 13 is present only in some of the cells of the organism.","definition_xrefs":["doi:10.1186/1753-6561-9-S1-A51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisomy 13","termid":"MONDO:0018068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"mosaic trisomy 13","secondary_identifiers":["GARD:10869"],"synonyms":[{"name":"trisomy 13 mosaicism","type":"exact"}],"termid":"MONDO:0700034","xrefs":{"Monarch":{"xref_id":"0700034"}}}


id: PBO:0062160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 1","termid":"PBO:0062160"}


id: MONDO:0014707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"14q32 duplication syndrome is a rare chromosomal anomaly syndrome resulting from the partial duplication of the long arm of chromosome 14 that results in a predisposition to a number of adult-onset myeloproliferative neoplasms, including acute myeloid leukemia, chronic myelomonocytic leukemia, and myeloproliferative neoplasms, especially essential thrombocythemia. Progression to myelofibrosis and secondary acute myeloid leukemia can be observed.","definition_xrefs":["Orphanet:488280"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 14","termid":"MONDO:0016964"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14q32 duplication syndrome","secondary_identifiers":["MEDGEN:896239","GARD:17890","OMIM:616604","UMLS:C4225449"],"synonyms":[{"name":"chromosome 14q32 DUPLICATION syndrome, 700-KB","type":"related"},{"name":"dup(14)q(32)","type":"exact"},{"name":"myeloproliferative neoplasms, familial, susceptibility to","type":"related"},{"name":"predisposition to adult-onset myeloproliferative neoplasm due to 14q32 duplication","type":"exact"},{"name":"trisomy 14q32","type":"exact"}],"termid":"MONDO:0014707","xrefs":{"Monarch":{"xref_id":"0014707"}}}


id: MONDO:0012218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dandy-walker malformation with occipital cephalocele, autosomal dominant","secondary_identifiers":["OMIM:609222","MEDGEN:393273","MESH:C567185","UMLS:C2674987"],"synonyms":[{"name":"ADDWOC","type":"exact"},{"name":"Dandy-Walker malformation with occipital cephalocele, autosomal dominant","type":"related"}],"termid":"MONDO:0012218","xrefs":{"Monarch":{"xref_id":"0012218"}}}


id: PBO:0079861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-119 lipid binding chaperone B","termid":"PBO:0079861"}


id: GO:0015669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances that are gaseous in normal living conditions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"gas transport","termid":"GO:0015669"}


id: GO:0034194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-galactonate, the anion of D-galactonic acid.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"galactonate catabolic process","termid":"GO:0019584"},{"relation_name":"is_a","term_name":"D-galactonate metabolic process","termid":"GO:0034192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"D-galactonate catabolic process","secondary_identifiers":["MetaCyc:GALACTCAT-PWY"],"synonyms":[{"name":"D-galactonate breakdown","type":"exact"},{"name":"D-galactonate catabolism","type":"exact"},{"name":"D-galactonate degradation","type":"exact"}],"termid":"GO:0034194"}


id: MONDO:0014480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 9","secondary_identifiers":["DOID:0111770","OMIM:616067","MEDGEN:863566","GARD:18361","UMLS:C4015129"],"synonyms":[{"name":"46,XY SEX reversal 9","type":"related"},{"name":"46,XY Sex reversal type 9","type":"exact"},{"name":"46,XY Sex reversal, Zfpm2-related","type":"related"},{"name":"46,XY sex reversal 9","type":"exact"},{"name":"46XY sex reversal 9","type":"exact"},{"name":"SRXY9","type":"related"}],"termid":"MONDO:0014480","xrefs":{"Monarch":{"xref_id":"0014480"}}}


id: GO:0043522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a leucine zipper domain, a protein secondary structure exhibiting a periodic repetition of leucine residues at every seventh position over a distance covering eight helical turns.","definition_xrefs":["GOC:jl","InterPro:IPR002158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LRR domain binding","termid":"GO:0030275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"leucine zipper domain binding","synonyms":[{"name":"leucine zipper binding","type":"exact"}],"termid":"GO:0043522"}


id: PBO:0005625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-F (predicted)","termid":"PBO:0005625"}


id: PBO:0069719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 999, pseudogene","termid":"PBO:0069719"}


id: GO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a subpopulation of granulosa cells surrounding the oocyte acquires the specialized features of an ovarian cumulus cell.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"antral ovarian follicle growth","termid":"GO:0001547"},{"relation_name":"part_of","term_name":"fused antrum stage","termid":"GO:0048165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cumulus cell differentiation","synonyms":[{"name":"ovarian cumulus cell differentiation","type":"exact"}],"termid":"GO:0001549"}


id: MONDO:0007657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"giant neutrophil leukocytes","secondary_identifiers":["OMIM:137500","MEDGEN:330754","UMLS:C1842039"],"synonyms":[{"name":"giant neutrophil leukocytes","type":"exact"}],"termid":"MONDO:0007657","xrefs":{"Monarch":{"xref_id":"0007657"}}}


id: PBO:0051313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-9 (pseudogene)","termid":"PBO:0051313"}


id: GO:1904121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes phosphatidylethanolamine from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GO_REF:0000066","PMID:8606365","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0120013","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylethanolamine transfer activity","synonyms":[{"name":"intermembrane phosphatidylethanolamine transfer activity","type":"narrow"},{"name":"phosphatidylethanolamine carrier activity","type":"exact"},{"name":"phosphatidylethanolamine transporter activity","type":"broad"}],"termid":"GO:1904121"}


id: PBO:0056331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 12","termid":"PBO:0056331"}


id: PBO:0000396
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.2","termid":"PBO:0000396"}


id: PBO:0047612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate hydratase pseudogene 1","termid":"PBO:0047612"}


id: MONDO:0018375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary avascular necrosis","termid":"MONDO:0018374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traumatic avascular necrosis","secondary_identifiers":["Orphanet:399175","UMLS:C5680037","GARD:21660","icd11.foundation:822486319","MEDGEN:1802844"],"synonyms":[{"name":"traumatic AVN","type":"exact"}],"termid":"MONDO:0018375","xrefs":{"Monarch":{"xref_id":"0018375"}}}


id: MONDO:0024634
data:
  {"annotated_genes":["SJAG_01620","SJAG_01837","SJAG_02426","SJAG_04699","SJAG_01082","SJAG_04206","SJAG_00980","SJAG_02187","SJAG_02748","SJAG_03453","SJAG_04394","SJAG_02226","SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86011,86009,86013,86007,86014,86010,86008,86012,86859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[85899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[84720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[85170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[85172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[85183,85182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A disease that involves the large intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"large intestine disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:119523007","MEDGEN:574315","UMLS:C0341321"],"synonyms":[{"name":"disease of large intestine","type":"exact"},{"name":"disease or disorder of large intestine","type":"exact"},{"name":"disorder of large intestine","type":"exact"},{"name":"large intestine disease or disorder","type":"exact"}],"termid":"MONDO:0024634","terms_by_termid":{"MONDO:0005575":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0024634"}}}


id: PBO:0061097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLGN1 antisense RNA 1","termid":"PBO:0061097"}


id: PR:O13689
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11E3.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11E3.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.10","synonyms":[{"name":"Spom972h-SPAC11E3.10","type":"exact"}],"termid":"PR:O13689"}


id: PBO:0002295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucoside transporter Sut1","termid":"PBO:0002295"}


id: GO:0032970
data:
  {"annotated_genes":["SJAG_03486","SJAG_01774","SJAG_00424","SJAG_04666","SJAG_00521","SJAG_04100","SJAG_04479","SJAG_01894","SJAG_02684","SJAG_02566","SJAG_01805","SJAG_02392","SJAG_01993","SJAG_03455","SJAG_03048","SJAG_01320","SJAG_03086","SJAG_05000","SJAG_00082","SJAG_04522","SJAG_01821","SJAG_02592","SJAG_00610","SJAG_01826","SJAG_02795","SJAG_02366","SJAG_04597","SJAG_00279","SJAG_03655","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87772,91834,113761,98399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[90387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[97783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[101856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[89508,93917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[92213,95360,89246,102332,114791,98945,106150,109562,93347,93922,114763,115932,91930,88951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032956"},{"annotations":[107079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[89339,90191,102231,101240,104637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[118919,93311,93883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the actin cytoskeleton.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"actin filament-based process","termid":"GO:0030029"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00279":null,"SJAG_00424":null,"SJAG_00521":null,"SJAG_00610":null,"SJAG_01320":null,"SJAG_01774":null,"SJAG_01805":null,"SJAG_01821":null,"SJAG_01826":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02366":null,"SJAG_02392":null,"SJAG_02566":null,"SJAG_02592":null,"SJAG_02684":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_03048":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_03486":null,"SJAG_03655":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04522":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament-based process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32915139":null},"termid":"GO:0032970","terms_by_termid":{"GO:0030833":null,"GO:0032231":null,"GO:0032956":null,"GO:0034316":null,"GO:0051016":null,"GO:0120306":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: PBO:0061092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK6 homeobox 1","termid":"PBO:0061092"}


id: PBO:0067169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 222, pseudogene","termid":"PBO:0067169"}


id: GO:0052698
data:
  {"annotated_genes":["SJAG_00832","SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110987,110988,103111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ergothioneine, a naturally occurring metabolite of histidine with antioxidant properties.","definition_xrefs":["Wikipedia:Ergothioneine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"},{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"},{"relation_name":"is_a","term_name":"modified histidine metabolic process","termid":"GO:0052701"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"ergothioneine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"(2S)-3-(2-mercapto-1H-imidazol-5-yl)-2-(trimethylazaniumyl)propanoate metabolic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine metabolic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine metabolism","type":"exact"},{"name":"ergothioneine metabolism","type":"exact"}],"termid":"GO:0052698","terms_by_termid":{"GO:0052699":null}}


id: PBO:0012823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-required_for","termid":"PBO:0012823"}


id: MOD:00789
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - isotopic label ICPL method - The paper describes an H/D labeling strategy whereas the commercial product follows a C/13C labeling strategy. The digest is typically applied AFTER ICPL_light/heavy labeling, only Protein N-term labeling and Lys-specific labeling is applied.","definition_xrefs":["Unimod:364","URL:http://www.serva.de/products/sheets/39230-E.pdf","PubMed:15602776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","type":"related"},{"name":"ICPL:13C(6)","type":"related"}],"termid":"MOD:00789"}


id: MONDO:0008936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar ataxia and neurosensory deafness","secondary_identifiers":["MEDGEN:395224","MESH:C565869","OMIM:212850","UMLS:C1859304"],"synonyms":[{"name":"cerebellar ataxia and neurosensory deafness","type":"exact"}],"termid":"MONDO:0008936","xrefs":{"Monarch":{"xref_id":"0008936"}}}


id: GO:0050046
data:
  {"annotated_genes":["SJAG_00717","SJAG_03509"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89173,106997],"is_not":false,"summary":null,"term":"GO:0050046"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a delta(7)-sterol + 2 ferrocytochrome b5 + O2 + 2 H+ -> a delta(5,7)-sterol + 2 ferricytochrome b5 + 2 H2O.","definition_xrefs":["RHEA:54320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"delta7-sterol 5(6)-desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.14.19.20","MetaCyc:RXN-16378"],"synonyms":[{"name":"5-DES","type":"related"},{"name":"delta7-sterol 5-desaturase activity","type":"related"},{"name":"delta7-sterol delta5-dehydrogenase activity","type":"related"},{"name":"delta7-sterol-C5(6)-desaturase activity","type":"related"},{"name":"lathosterol 5-desaturase activity","type":"related"},{"name":"lathosterol oxidase activity","type":"exact"}],"termid":"GO:0050046","terms_by_termid":{"GO:0050046":null}}


id: GO:1902940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of intracellular calcium activated chloride channel activity.","definition_xrefs":["GOC:TermGenie","GOC:als","GO_REF:0000059","PMID:22946059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of intracellular calcium activated chloride channel activity (obsolete GO:1902940)","synonyms":[{"name":"activation of intracellular calcium activated chloride channel activity","type":"narrow"},{"name":"up regulation of intracellular calcium activated chloride channel activity","type":"exact"},{"name":"up-regulation of intracellular calcium activated chloride channel activity","type":"exact"},{"name":"upregulation of intracellular calcium activated chloride channel activity","type":"exact"}],"termid":"GO:1902940"}


id: PR:000049980
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein rad9 (Schizosaccharomyces pombe) that has been phosphorylated on a residue equivalent to Ser-423 of the amino acid sequence represented by UniProtKB:P26306. Example: UniProtKB:P26306, Ser-423, MOD:00046.","definition_xrefs":["PRO:CNA","PomBase:MAH","PMID:21561865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","termid":"PR:000044575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rad9/Phos(S423)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA repair protein rad9 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"rad9/Phos(S423)","type":"exact"}],"termid":"PR:000049980"}


id: MONDO:0014190
data:
  {"annotated_genes":["SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85456,85457],"is_not":false,"summary":null,"term":"MONDO:0014190"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the ELAC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:815856","OMIM:615440","UMLS:C3809526","DOID:0111496","Orphanet:369913","GARD:17589"],"synonyms":[{"name":"COXPD17","type":"exact"},{"name":"ELAC2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 17","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in ELAC2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 17","type":"exact"}],"termid":"MONDO:0014190","terms_by_termid":{"MONDO:0014190":null},"xrefs":{"Monarch":{"xref_id":"0014190"}}}


id: FYPO:0006004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule organization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["GO:0031122","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal interphase microtubule organization","synonyms":[{"name":"normal cytoplasmic microtubule organization during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule organization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule organization during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule organization","type":"exact"},{"name":"normal interphase microtubule organisation","type":"exact"}],"termid":"FYPO:0006004"}


id: PBO:0052388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 26B","termid":"PBO:0052388"}


id: GO:0046808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Antigenically dense structures located at the periphery of nuclei, close to but not abutting nuclear membranes. Assemblons contain the proteins for immature-capsid assembly; they are located at the periphery of a diffuse structure composed of proteins involved in DNA synthesis, which overlaps only minimally with the assemblons. More than one site can be present simultaneously.","definition_xrefs":["PMID:8676489"],"gene_count":0,"genotype_count":0,"name":"obsolete assemblon (obsolete GO:0046808)","termid":"GO:0046808"}


id: PBO:0078777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 3-1","termid":"PBO:0078777"}


id: GO:0030379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neurotensin, a neuropeptide active in the central and peripheral nervous system in mammals, and transmitting the signal from one side of the membrane to the other by a mechanism independent of coupling to G proteins.","definition_xrefs":["GOC:mah","GOC:signaling","PMID:9756851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neurotensin receptor activity, non-G protein-coupled","synonyms":[{"name":"neurotensin receptor activity, non G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, non-G-protein coupled","type":"exact"},{"name":"non G protein coupled neurotensin receptor activity","type":"exact"},{"name":"non-G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"non-G-protein-coupled neurotensin receptor activity","type":"exact"}],"termid":"GO:0030379"}


id: MONDO:0003449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syringocystadenoma papilliferum (obsolete MONDO:0003449)","termid":"MONDO:0003449","xrefs":{"Monarch":{"xref_id":"0003449"}}}


id: PBO:0045006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 1","termid":"PBO:0045006"}


id: MONDO:0011849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joint inflammation associated with psoriasis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatoid arthritis","termid":"MONDO:0008383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"psoriatic arthritis","secondary_identifiers":["NANDO:2201059","Orphanet:40050","SCTID:156370009","UMLS:C0003872","EFO:0003778","MESH:D015535","DOID:9008","MEDGEN:2077","icd11.foundation:868183264","ICD9:696.0","NCIT:C61277"],"synonyms":[{"name":"arthritis psoriatica","type":"exact"},{"name":"arthropathic psoriasis","type":"exact"},{"name":"psoriatic arthritis, susceptibility to","type":"related"},{"name":"psoriatic arthritis, susceptibility to, 1","type":"related"},{"name":"psoriatic arthropathy","type":"related"},{"name":"susceptibility to psoriatic arthritis","type":"related"}],"termid":"MONDO:0011849","xrefs":{"Monarch":{"xref_id":"0011849"}}}


id: PBO:0040083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARSD antisense RNA 1","termid":"PBO:0040083"}


id: MONDO:0015263
data:
  {"annotated_genes":["SJAG_01012","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84585,84584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012728"}]},"cv_name":"mondo","definition":"A genetically heterogeneous condition characterized by complete or incomplete right bundle branch block accompanied by ST elevation in leads V1-V3. There is a high incidence of ventricular arrhythmia that may result in sudden death.","definition_xrefs":["NCIT:C142891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:418818005","UMLS:C1142166","GARD:1030","MESH:D053840","OMIMPS:601144","NORD:878","icd11.foundation:1250136584","ICD9:746.89","Orphanet:130","MedDRA:10059027","MEDGEN:222975","DOID:0050451"],"synonyms":[{"name":"Bangungut","type":"exact"},{"name":"Brugada syndrome","type":"exact"},{"name":"Brugada type idiopathic ventricular fibrillation","type":"exact"},{"name":"Pokkuri death syndrome","type":"exact"},{"name":"SUNDS","type":"exact"},{"name":"dream disease","type":"exact"},{"name":"idiopathic ventricular fibrillation, Brugada type","type":"exact"},{"name":"right bundle branch block, ST segment elevation, and sudden death syndrome","type":"exact"},{"name":"sudden unexpected nocturnal death syndrome","type":"related"},{"name":"sudden unexplained nocturnal death syndrome","type":"exact"}],"termid":"MONDO:0015263","terms_by_termid":{"MONDO:0012728":null},"xrefs":{"Monarch":{"xref_id":"0015263"}}}


id: PBO:0050999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport associated protein","termid":"PBO:0050999"}


id: GO:1904910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of RNA localization to telomere.","definition_xrefs":["PMID:26586433","GOC:BHF","GOC:BHF_telomere","GOC:TermGenie","GOC:rph","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"establishment of RNA localization to telomere","termid":"GO:0097694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of RNA localization to telomere","synonyms":[{"name":"regulation of establishment of RNA localisation to telomere","type":"exact"}],"termid":"GO:1904910"}


id: PBO:0079551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 4","termid":"PBO:0079551"}


id: MONDO:0006608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, inflammatory skin disorder that affects the scalp, central face and skin folds; it is characterized by scaling and itching.","definition_xrefs":["NCIT:C111888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"seborrheic dermatitis","secondary_identifiers":["ICD9:690.1","UMLS:C0036508","MEDGEN:19912","ICD9:690.10","EFO:1000764","DOID:8741","MESH:D012628","ICD9:706.3","HP:0001051"],"synonyms":[{"name":"Seborrhoeic dermatitis","type":"exact"},{"name":"Seborrhoeic eczema","type":"exact"},{"name":"cradle Cap","type":"exact"},{"name":"seborrhea","type":"exact"},{"name":"seborrheic dermatitis","type":"exact"},{"name":"seborrheic dermatitis (disease)","type":"exact"},{"name":"seborrheic eczema","type":"exact"},{"name":"skin seborrheic","type":"exact"}],"termid":"MONDO:0006608","xrefs":{"Monarch":{"xref_id":"0006608"}}}


id: GO:0015562
data:
  {"annotated_genes":["SJAG_01183","SJAG_03899"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080139"},{"annotations":[95529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a specific substance or related group of substances from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01183":null,"SJAG_03899":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"efflux transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"efflux permease activity","type":"exact"},{"name":"efflux transporter activity","type":"exact"},{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0015562","terms_by_termid":{"GO:0034639":null,"GO:0080139":null}}


id: PBO:0081260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 30","termid":"PBO:0081260"}


id: GO:0038057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tumor necrosis factor ligand superfamily member 11 (TNFSF11), a member of the tumor necrosis factor (TNF) cytokine family.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor binding","termid":"GO:0043120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TNFSF11 binding","synonyms":[{"name":"CD254 binding","type":"exact"},{"name":"ODF binding","type":"exact"},{"name":"OPGL binding","type":"exact"},{"name":"RANKL binding","type":"exact"},{"name":"TNF-related activation-induced cytokine binding","type":"exact"},{"name":"TRANCE binding","type":"exact"},{"name":"osteoclast differentiation factor binding","type":"exact"},{"name":"osteoprotegerin ligand binding","type":"exact"},{"name":"receptor activator of nuclear factor kappa-B ligand binding","type":"exact"},{"name":"tumor necrosis factor (ligand) superfamily member 11 binding","type":"exact"},{"name":"tumor necrosis factor ligand superfamily member 11 binding","type":"exact"},{"name":"tumor necrosis factor superfamily member 11 binding","type":"exact"}],"termid":"GO:0038057"}


id: GO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 36 of histone H3.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K36 methylation (obsolete GO:0000416)","synonyms":[{"name":"activation of histone H3-K36 methylation","type":"narrow"},{"name":"stimulation of histone H3-K36 methylation","type":"narrow"},{"name":"up regulation of histone H3-K36 methylation","type":"exact"},{"name":"up-regulation of histone H3-K36 methylation","type":"exact"},{"name":"upregulation of histone H3-K36 methylation","type":"exact"}],"termid":"GO:0000416"}


id: GO:0102542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: aclacinomycin A + H2O = 15-demethoxy-aclacinomycin A + methanol + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete aclacinomycin A methylesterase activity (obsolete GO:0102542)","termid":"GO:0102542"}


id: GO:0003297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the aorta inserts between the atrioventricular valves, contributing to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart wedging","termid":"GO:0003297"}


id: MONDO:1012565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyserythropoietic anemia and myopathy syndrome, non-human animal","termid":"MONDO:1011708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyserythropoietic anemia and myopathy syndrome, dog","secondary_identifiers":["OMIA:002564-9615"],"termid":"MONDO:1012565","xrefs":{"Monarch":{"xref_id":"1012565"}}}


id: FYPO:0003052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is abnormal at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PomBase:mah","PMID:22582262","PMID:24173580","PMID:23117617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"abnormal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"abnormal homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"abnormal synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003052"}


id: GO:0098969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptor to the postsynaptic membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport to plasma membrane","termid":"GO:0098877"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"establishment of protein localization to postsynaptic membrane","termid":"GO:1903540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter receptor transport to postsynaptic membrane","termid":"GO:0098969"}


id: PR:O60164
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pescadillo that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03820","PRO:DNx","PANTHER:PTHR12221:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.05c","secondary_identifiers":["UniProtKB:O60164"],"synonyms":[{"name":"Spom972h-PES1","type":"exact"},{"name":"nucleolar protein 7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60164"}


id: GO:1903591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of lysozyme activity.","definition_xrefs":["PMID:23954697","GO_REF:0000059","GOC:TermGenie","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of lysozyme activity (obsolete GO:1903591)","synonyms":[{"name":"down regulation of 1,4-N-acetylmuramidase activity","type":"exact"},{"name":"down regulation of L-7001","type":"related"},{"name":"down regulation of N,O-diacetylmuramidase activity","type":"exact"},{"name":"down regulation of PR1-lysozyme","type":"related"},{"name":"down regulation of globulin G","type":"related"},{"name":"down regulation of globulin G1","type":"related"},{"name":"down regulation of lysozyme activity","type":"exact"},{"name":"down regulation of lysozyme g","type":"related"},{"name":"down regulation of mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"down regulation of mucopeptide glucohydrolase activity","type":"exact"},{"name":"down regulation of muramidase activity","type":"exact"},{"name":"down regulation of peptidoglycan N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"down-regulation of 1,4-N-acetylmuramidase activity","type":"exact"},{"name":"down-regulation of L-7001","type":"related"},{"name":"down-regulation of N,O-diacetylmuramidase activity","type":"exact"},{"name":"down-regulation of PR1-lysozyme","type":"related"},{"name":"down-regulation of globulin G","type":"related"},{"name":"down-regulation of globulin G1","type":"related"},{"name":"down-regulation of lysozyme activity","type":"exact"},{"name":"down-regulation of lysozyme g","type":"related"},{"name":"down-regulation of mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"down-regulation of mucopeptide glucohydrolase activity","type":"exact"},{"name":"down-regulation of muramidase activity","type":"exact"},{"name":"down-regulation of peptidoglycan N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"downregulation of 1,4-N-acetylmuramidase activity","type":"exact"},{"name":"downregulation of L-7001","type":"related"},{"name":"downregulation of N,O-diacetylmuramidase activity","type":"exact"},{"name":"downregulation of PR1-lysozyme","type":"related"},{"name":"downregulation of globulin G","type":"related"},{"name":"downregulation of globulin G1","type":"related"},{"name":"downregulation of lysozyme activity","type":"exact"},{"name":"downregulation of lysozyme g","type":"related"},{"name":"downregulation of mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"downregulation of mucopeptide glucohydrolase activity","type":"exact"},{"name":"downregulation of muramidase activity","type":"exact"},{"name":"downregulation of peptidoglycan N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"inhibition of 1,4-N-acetylmuramidase activity","type":"narrow"},{"name":"inhibition of L-7001","type":"related"},{"name":"inhibition of N,O-diacetylmuramidase activity","type":"narrow"},{"name":"inhibition of PR1-lysozyme","type":"related"},{"name":"inhibition of globulin G","type":"related"},{"name":"inhibition of globulin G1","type":"related"},{"name":"inhibition of lysozyme activity","type":"narrow"},{"name":"inhibition of lysozyme g","type":"related"},{"name":"inhibition of mucopeptide N-acetylmuramoylhydrolase activity","type":"narrow"},{"name":"inhibition of mucopeptide glucohydrolase activity","type":"narrow"},{"name":"inhibition of muramidase activity","type":"narrow"},{"name":"inhibition of peptidoglycan N-acetylmuramoylhydrolase activity","type":"narrow"},{"name":"negative regulation of 1,4-N-acetylmuramidase activity","type":"exact"},{"name":"negative regulation of L-7001","type":"related"},{"name":"negative regulation of N,O-diacetylmuramidase activity","type":"exact"},{"name":"negative regulation of PR1-lysozyme","type":"related"},{"name":"negative regulation of globulin G","type":"related"},{"name":"negative regulation of globulin G1","type":"related"},{"name":"negative regulation of lysozyme g","type":"related"},{"name":"negative regulation of mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"negative regulation of mucopeptide glucohydrolase activity","type":"exact"},{"name":"negative regulation of muramidase activity","type":"exact"},{"name":"negative regulation of peptidoglycan N-acetylmuramoylhydrolase activity","type":"exact"}],"termid":"GO:1903591"}


id: GO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor of a target cell. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["ISBN:0781735149","PMID:12467241","PMID:12524386","PMID:12855817","PMID:15585605","PMID:15728447","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-168898"],"synonyms":[{"name":"TLR signaling pathway","type":"exact"},{"name":"toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002224"}


id: PBO:0050104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 14","termid":"PBO:0050104"}


id: FYPO:0003242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mRNA splicing via the spliceosome is decreased, where introns have low A/U content.","definition_xrefs":["PMID:23754748","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased splicing of mRNA introns with low A/U content","synonyms":[{"name":"decreased mRNA splicing, via spliceosome, introns with low A/U content","type":"exact"},{"name":"decreased nuclear mRNA splicing, via spliceosome, introns with low A/U content","type":"exact"},{"name":"decreased splicing of mRNA introns with low A/U content","type":"broad"},{"name":"decreased splicing of mRNA introns with low A/U content during mitotic cell cycle","type":"related"},{"name":"decreased splicing of mRNA introns with low A/U content during vegetative growth","type":"exact"},{"name":"reduced splicing of mRNA introns with low A/U content","type":"exact"}],"termid":"FYPO:0003242"}


id: GO:0070259
data:
  {"annotated_genes":["SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017005"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphotyrosyl groups formed as covalent intermediates (in DNA backbone breakage) between a DNA topoisomerase and DNA.","definition_xrefs":["GOC:elh","PMID:16751265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0140097","GO:0016788"],"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070259","terms_by_termid":{"GO:0017005":null}}


id: PBO:0077364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM105 long non-coding RNA","termid":"PBO:0077364"}


id: GO:0050350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + 3,4',5-trihydroxy-stilbene + 4 CO2.","definition_xrefs":["EC:2.3.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trihydroxystilbene synthase activity","secondary_identifiers":["RHEA:11936","MetaCyc:RXN-87"],"synonyms":[{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing)","type":"broad"},{"name":"resveratrol synthase activity","type":"related"},{"name":"stilbene synthase activity","type":"broad"}],"termid":"GO:0050350"}


id: GO:0052868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein-lysine + protein-lysine = protein N6-(lysyl)-L-lysine + protein. This reaction is the addition of lysine group from one protein to a lysine residue in a second protein, producing N6-(lysyl)-L-lysine.","definition_xrefs":["PMID:20729861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein-lysine lysyltransferase activity","termid":"GO:0052868"}


id: MONDO:0001999
data:
  {"annotated_genes":["SJAG_03866","SJAG_04757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86163,86164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009935"}]},"cv_name":"mondo","definition":"Increased blood pressure in the arteries of the lungs; the etiology is unknown.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic pulmonary heart disease","termid":"MONDO:0001493"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"primary pulmonary hypertension","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:416.0","MEDGEN:57749","UMLS:C0152171","ICD10CM:I27.0","DOID:14557"],"synonyms":[{"name":"primary pulmonary hypertension","type":"exact"},{"name":"pulmonary hypertension, primary","type":"exact"}],"termid":"MONDO:0001999","terms_by_termid":{"MONDO:0009935":null},"xrefs":{"Monarch":{"xref_id":"0001999"}}}


id: PBO:0052275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5C","termid":"PBO:0052275"}


id: PBO:0049921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HFE antisense RNA 1","termid":"PBO:0049921"}


id: GO:0140822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ADP-ribose groups to the glutamate-35 residue of the N-terminal tail of histone H2B (or an equivalent residue).","definition_xrefs":["PMID:32822587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein-glutamate ADP-ribosyltransferase activity","termid":"GO:0140807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NAD+-histone H2BE35 glutamate ADP-ribosyltransferase activity","synonyms":[{"name":"NAD+-histone H2B-E35 glutamate ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+-histone-glutamate ADP-ribosyltransferase activity (H2B-E35 specific)","type":"exact"}],"termid":"GO:0140822"}


id: GO:0032684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of fractalkine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fractalkine production","termid":"GO:0032644"},{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"negatively_regulates","term_name":"fractalkine production","termid":"GO:0032603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of fractalkine production","secondary_identifiers":["GO:0050753"],"synonyms":[{"name":"down regulation of fractalkine production","type":"exact"},{"name":"down-regulation of fractalkine production","type":"exact"},{"name":"downregulation of fractalkine production","type":"exact"},{"name":"inhibition of fractalkine production","type":"narrow"},{"name":"negative regulation of CX3CL1 biosynthesis","type":"narrow"},{"name":"negative regulation of CX3CL1 production","type":"exact"},{"name":"negative regulation of fractalkine biosynthetic process","type":"narrow"}],"termid":"GO:0032684"}


