# terms

id: GO:0021597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the central nervous system structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","GOC:dph","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"central nervous system morphogenesis","termid":"GO:0021551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system structural organization","synonyms":[{"name":"central nervous system structural organisation","type":"exact"}],"termid":"GO:0021597"}


id: FYPO:0004055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during cellular response to osmotic stress","termid":"FYPO:0006743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to salt stress","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus during salt stress","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004055"}


id: PBO:0024826
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Arabidopsis thaliana AtSGP2","termid":"PBO:0024826"}


id: PATO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed mesiolaterally.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesiolateral orientation","termid":"PATO:0002524"}


id: GO:0008595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"},{"relation_name":"is_a","term_name":"anterior/posterior axis specification","termid":"GO:0009948"},{"relation_name":"part_of","term_name":"tripartite regional subdivision","termid":"GO:0007351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior axis specification, embryo","synonyms":[{"name":"anterior/posterior axis determination, embryo","type":"related"}],"termid":"GO:0008595"}


id: GO:1902936
data:
  {"annotated_genes":["SJAG_01783","SJAG_02166","SJAG_02572","SJAG_00117","SJAG_05179","SJAG_00152","SJAG_02657","SJAG_02613","SJAG_01143","SJAG_01748","SJAG_00118","SJAG_00115","SJAG_04963","SJAG_04644","SJAG_04960","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98113,98828,97109,99779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[101413,116974,116482,98791,105495,106064,101260,90263,87508,101251,114328,118411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol bisphosphate.","definition_xrefs":["GOC:bhm","GO_REF:0000067","GOC:TermGenie","PMID:18690034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00117":null,"SJAG_00118":null,"SJAG_00152":null,"SJAG_00368":null,"SJAG_01143":null,"SJAG_01748":null,"SJAG_01783":null,"SJAG_02166":null,"SJAG_02572":null,"SJAG_02613":null,"SJAG_02657":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_04963":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol bisphosphate binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902936","terms_by_termid":{"GO:0005546":null,"GO:0080025":null}}


id: PBO:0035798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_protein_coding_gene_during_vegetative_growth","termid":"PBO:0035798"}


id: PBO:0079063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon TAC) 3-1","termid":"PBO:0079063"}


id: PBO:0088738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex subunit Hip3","termid":"PBO:0088738"}


id: GO:2001310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.","definition_xrefs":["PMID:16333108","GOC:di","PMID:18272357","PMID:29966253","PMID:17574915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"gliotoxin metabolic process","termid":"GO:2001308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0019748"],"is_obsolete":false,"name":"gliotoxin biosynthetic process","synonyms":[{"name":"gliotoxin anabolism","type":"exact"},{"name":"gliotoxin biosynthesis","type":"exact"},{"name":"gliotoxin formation","type":"exact"},{"name":"gliotoxin synthesis","type":"exact"}],"termid":"GO:2001310"}


id: PR:O74398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prickle-like protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.12","secondary_identifiers":["UniProtKB:O74398"],"synonyms":[{"name":"Spom972h-PRICKLE4","type":"exact"}],"termid":"PR:O74398"}


id: RO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"transports","termid":"RO:0002020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exports","termid":"RO:0002345"}


id: PBO:0113352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear retention of unspliced pre-mRNAs; required along with Mlp1p and Pml1p; anchored to the nuclear pore complex through an interaction between its bimodular nuclear basket-interaction domain (NuBaID) and Mlp1p and Mlp2p; localizes to the nuclear basket enables linkage between subpopulations of Mlp1p; associates with the subset of nuclear pores farthest from the nucleolus; homologous to human ZC3HC1, a NuBaID containing protein","termid":"PBO:0113352"}


id: PBO:0059743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 17","termid":"PBO:0059743"}


id: MONDO:0022729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chondrodysplasia","termid":"MONDO:0022723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia punctata with steroid sulfatase deficiency","termid":"MONDO:0022729","xrefs":{"Monarch":{"xref_id":"0022729"}}}


id: FYPO:0001152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to nitrogen starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during nitrogen starvation","synonyms":[{"name":"decreased RNA accumulation during nitrogen starvation","type":"related"},{"name":"decreased RNA level during nitrogen depletion","type":"exact"},{"name":"decreased RNA level during nitrogen deprivation","type":"exact"},{"name":"decreased transcript level during nitrogen starvation","type":"exact"},{"name":"reduced RNA level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001152"}


id: GO:0042689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of crystal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"regulates","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of crystal cell differentiation","termid":"GO:0042689"}


id: PBO:0079575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin D","termid":"PBO:0079575"}


id: MONDO:0019429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked neurodegenerative disorder characterized by intellectual deficit, blindness, convulsions, spasticity, mild hypomyelination and early death. It has been described in about ten male members from two generations of one family. The genetic defect responsible for the disorder is located in the pericentromeric region of the X chromosome, Xp11.3-q12.","definition_xrefs":["Orphanet:85336"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"X-linked neurodegenerative syndrome, Hamel type","secondary_identifiers":["GARD:19062","SCTID:718847005","UMLS:C4305135","MEDGEN:930804"],"termid":"MONDO:0019429","xrefs":{"Monarch":{"xref_id":"0019429"}}}


id: PATO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001000 relative alternation (obsolete PATO:0001000)","termid":"PATO:0001000"}


id: GO:0046866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tetraterpenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tetraterpenoids are terpenoids with eight isoprene units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tetraterpenoid transport","termid":"GO:0046866"}


id: PBO:0065301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 8","termid":"PBO:0065301"}


id: PBO:0040783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta cell long intergenic noncoding RNA 1","termid":"PBO:0040783"}


id: MONDO:0030797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 93","secondary_identifiers":["OMIM:619845","UMLS:C5676970","MEDGEN:1810905"],"synonyms":[{"name":"RP93","type":"exact"},{"name":"retinitis pigmentosa 93","type":"exact"}],"termid":"MONDO:0030797","xrefs":{"Monarch":{"xref_id":"0030797"}}}


id: PBO:0044074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage stimulation factor subunit 2","termid":"PBO:0044074"}


id: PBO:0088092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetyl-glucosamine-1-P transferase; transfers Glc-Nac-P from UDP-GlcNac to Dol-P in the ER in the first step of the dolichol pathway of protein asparagine-linked glycosylation; inhibited by tunicamycin; human homolog DPAGT1 can complement yeast ALG7 mutant","termid":"PBO:0088092"}


id: PBO:0069701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 980, pseudogene","termid":"PBO:0069701"}


id: PBO:0056115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLAL1 divergent transcript","termid":"PBO:0056115"}


id: GO:1901427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a propan-1-ol stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to propan-1-ol","termid":"GO:1901427"}


id: PBO:0057628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1203","termid":"PBO:0057628"}


id: FYPO:0002424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle. Cortical patches are normally present at both old and new ends of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cortical patch localization","termid":"FYPO:0001294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal actin cortical patch localization during mitotic interphase","synonyms":[{"name":"normal F-actin patch localization during mitotic interphase","type":"exact"},{"name":"normal actin cortical patch localisation during mitotic interphase","type":"exact"},{"name":"normal actin cortical patch localization at non-growing end during mitotic interphase","type":"related"},{"name":"normal actin cortical patch localization during mitotic interphase during vegetative growth","type":"exact"},{"name":"normal actin cortical patch location during mitotic interphase","type":"related"},{"name":"normal actin patch localization during mitotic interphase","type":"exact"}],"termid":"FYPO:0002424"}


id: GO:0009494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast-type ferredoxin (obsolete GO:0009494)","synonyms":[{"name":"chloroplast-type ferredoxin","type":"exact"}],"termid":"GO:0009494"}


id: MONDO:0003747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glomus tumor characterized by huge vascular channel formations.","definition_xrefs":["NCIT:C5345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous glomangioma","termid":"MONDO:0002298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"telangiectatic glomangioma","secondary_identifiers":["DOID:6048","MEDGEN:236998","UMLS:C1336699"],"synonyms":[{"name":"telangiectatic glomangioma","type":"exact"}],"termid":"MONDO:0003747","xrefs":{"Monarch":{"xref_id":"0003747"}}}


id: GO:0000958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mRNA transcribed from the mitochondrial genome and occurring in the mitochondrion.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"},{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}


id: PBO:0059025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 14","termid":"PBO:0059025"}


id: PBO:0082782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the telomerase holoenzyme; involved in telomere replication; synthesis of the full-length protein results from a programmed +1 ribosomal frameshift","termid":"PBO:0082782"}


id: PBO:0036303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThrE amino acid transmembrane transporter family protein","termid":"PBO:0036303"}


id: PBO:0078547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 38","termid":"PBO:0078547"}


id: MONDO:0013584
data:
  {"annotated_genes":["SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85461],"is_not":false,"summary":null,"term":"MONDO:0013584"}]},"cv_name":"mondo","definition":"A hereditary sensory neuropathy characterized by adult onset of progressive peripheral sensory loss, progressive hearing impairment, and early-onset dementia that has material basis in heterozygous mutation in the DNMT1 gene on chromosome 19p13.","definition_xrefs":["DOID:0070158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy type 1","termid":"MONDO:0018213"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002525","MONDO:0002039","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"hereditary sensory neuropathy-deafness-dementia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:481515","Orphanet:456318","UMLS:C3279885","OMIM:614116","MESH:C580162","NORD:1903","GARD:11927"],"synonyms":[{"name":"DNMT1-related dementia, deafness, and sensory neuropathy","type":"related"},{"name":"HSAN1E","type":"exact"},{"name":"HSN 1E","type":"related"},{"name":"HSN1E","type":"exact"},{"name":"HSNIE","type":"related"},{"name":"Hereditary Sensory and Autonomic Neuropathy Type 1E","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 1E","type":"related"},{"name":"hereditary sensory neuropathy type 1E","type":"related"},{"name":"hereditary sensory neuropathy type IE","type":"exact"},{"name":"hereditary sensory neuropathy with hearing loss and dementia","type":"related"},{"name":"hereditary sensory neuropathy-sensorineural hearing loss-dementia syndrome","type":"exact"},{"name":"neuropathy, hereditary sensory, type 1E","type":"related"},{"name":"neuropathy, hereditary sensory, type IE","type":"related"},{"name":"neuropathy, hereditary sensory, with hearing loss and dementia","type":"related"}],"termid":"MONDO:0013584","terms_by_termid":{"MONDO:0013584":null},"xrefs":{"Monarch":{"xref_id":"0013584"}}}


id: FYPO:0000471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mating type switching is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating type switching","termid":"FYPO:0000468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased mating type switching","synonyms":[{"name":"increased mating type switching during mitotic cell cycle","type":"related"},{"name":"increased mating type switching during vegetative growth","type":"exact"},{"name":"mating type switching: increased","type":"related"}],"termid":"FYPO:0000471"}


id: MONDO:0019105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, syndromic renal disease characterized by the entrapment of left renal vein (LRV) between the superior mesenteric artery (SMA) and the abdominal aorta, resulting in increased luminal pressure, renal hilar varices, hematuria and, at the microscopic level, rupture of thin-walled veins into the collecting system in renal fornices.","definition_xrefs":["Orphanet:71273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal nutcracker syndrome","secondary_identifiers":["EFO:1001838","SCTID:717267005","GARD:11971","MEDGEN:465238","UMLS:C3178770","MESH:D059228"],"synonyms":[{"name":"RNS","type":"exact"},{"name":"left renal vein entrapment syndrome","type":"exact"},{"name":"nutcracker syndrome","type":"related"}],"termid":"MONDO:0019105","xrefs":{"Monarch":{"xref_id":"0019105"}}}


id: MONDO:0008609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tristichiasis","secondary_identifiers":["OMIM:190800","MEDGEN:349889","UMLS:C1860785"],"synonyms":[{"name":"Tristichiasis","type":"exact"},{"name":"eyelashes, three rows of","type":"related"}],"termid":"MONDO:0008609","xrefs":{"Monarch":{"xref_id":"0008609"}}}


id: PBO:0003427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF1A-like (predicted)","termid":"PBO:0003427"}


id: GO:0046082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 5-methylcytosine, a methylated base of DNA.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-methylcytosine biosynthetic process (obsolete GO:0046082)","synonyms":[{"name":"5-methylcytosine anabolism","type":"exact"},{"name":"5-methylcytosine biosynthesis","type":"exact"},{"name":"5-methylcytosine formation","type":"exact"},{"name":"5-methylcytosine synthesis","type":"exact"}],"termid":"GO:0046082"}


id: GO:0018654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyphenylacetate + NADH + O2 = NAD+ + OH- + homogentisate.","definition_xrefs":["UM-BBD_reactionID:r0252","PMID:8919815"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-phenylacetate hydroxylase activity (obsolete GO:0018654)","termid":"GO:0018654"}


id: GO:0004605
data:
  {"annotated_genes":["SJAG_03563","SJAG_00426"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102490,105680,118861],"is_not":false,"summary":null,"term":"GO:0004605"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol.","definition_xrefs":["EC:2.7.7.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphatidate cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25318672":null},"secondary_identifiers":["RHEA:16229","MetaCyc:CDPDIGLYSYN-RXN","Reactome:R-HSA-1483165","Reactome:R-HSA-1483121"],"synonyms":[{"name":"CDP diglyceride pyrophosphorylase activity","type":"related"},{"name":"CDP-DG","type":"related"},{"name":"CDP-diacylglyceride synthetase activity","type":"related"},{"name":"CDP-diacylglycerol synthase activity","type":"exact"},{"name":"CDP-diglyceride diphosphorylase activity","type":"exact"},{"name":"CDP-diglyceride pyrophosphorylase activity","type":"exact"},{"name":"CDP-diglyceride synthase activity","type":"exact"},{"name":"CDP-diglyceride synthetase activity","type":"related"},{"name":"CTP-diacylglycerol synthetase activity","type":"related"},{"name":"CTP:1,2-diacylglycerophosphate-cytidyl transferase activity","type":"related"},{"name":"CTP:phosphatidate cytidylyltransferase activity","type":"related"},{"name":"DAG synthetase activity","type":"related"},{"name":"cytidine diphosphoglyceride pyrophosphorylase activity","type":"related"},{"name":"phosphatidate cytidyltransferase activity","type":"related"},{"name":"phosphatidic acid cytidylyltransferase activity","type":"related"}],"termid":"GO:0004605","terms_by_termid":{"GO:0004605":null,"GO:0008654":null}}


id: MONDO:0700210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Enterovirus infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enterovirus infectious disease, non-human animal","termid":"MONDO:0700210","xrefs":{"Monarch":{"xref_id":"0700210"}}}


id: CHEBI:17234
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose","termid":"CHEBI:17234"}


id: GO:0006816
data:
  {"annotated_genes":["SJAG_04096","SJAG_02877","SJAG_04698","SJAG_04471","SJAG_04668","SJAG_00296","SJAG_01090","SJAG_01400","SJAG_03631","SJAG_04551","SJAG_03873","SJAG_03850","SJAG_02322","SJAG_04028","SJAG_02532","SJAG_05229","SJAG_02019","SJAG_02440","SJAG_04757","SJAG_03399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95135,96857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[91857,99128,113881,91908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[115006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[65437,90213,94322,108124,116823,101119,108829,95184,94956,97832,113363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070588"},{"annotations":[90709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[90215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032472"},{"annotations":[90727,112802],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[101634],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[108127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02440":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03399":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_03873":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04471":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"calcium transport","type":"exact"},{"name":"mitochondrial sodium/calcium ion exchange","type":"narrow"},{"name":"sodium:calcium exchange","type":"narrow"}],"termid":"GO:0006816","terms_by_termid":{"GO:0032472":null,"GO:0036444":null,"GO:0061454":null,"GO:0061856":null,"GO:0070588":null,"GO:0098703":null,"GO:0140146":null,"GO:1905665":null,"GO:1905949":null}}


id: PBO:0027252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_cells_with_astral_spindle_microtubules","termid":"PBO:0027252"}


id: PBO:0074905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 77","termid":"PBO:0074905"}


id: GO:0006266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA ligation (obsolete GO:0006266)","termid":"GO:0006266"}


id: PBO:0087777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit Vb of cytochrome c oxidase; cytochrome c oxidase is the terminal member of the mitochondrial inner membrane electron transport chain; Cox5Bp is predominantly expressed during anaerobic growth while its isoform Va (Cox5Ap) is expressed during aerobic growth; COX5B has a paralog, COX5A, that arose from the whole genome duplication","termid":"PBO:0087777"}


id: FYPO:0003389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable, is elongated, has a larger diameter than normal near the equator (but not at the ends), and has an overall volume greater than normal.","definition_xrefs":["PomBase:mah","PMID:24554432","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"},{"relation_name":"is_a","term_name":"viable swollen elongated vegetative cell","termid":"FYPO:0002479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"viable elongated vegetative cell with swollen medial region","synonyms":[{"name":"medial bulge formation phenotype","type":"exact"},{"name":"viable elongated vegetative cell with swollen medial region during mitotic cell cycle","type":"related"},{"name":"viable elongated vegetative cell with swollen medial region during vegetative growth","type":"exact"}],"termid":"FYPO:0003389"}


id: GO:0061101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a neuroendocrine cell. A neuroendocrine cell is a cell that receives input form a neuron which controls the secretion of an endocrine substance.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"is_a","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroendocrine cell differentiation","termid":"GO:0061101"}


id: MONDO:0010898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, familial partial epilepsy disease characterized by focal seizures associated with prominent ictal auditory symptoms, and/or receptive aphasia, presenting in two or more family members and having a relatively benign evolution.","definition_xrefs":["Orphanet:101046"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"},{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant epilepsy with auditory features","secondary_identifiers":["MESH:C537297","icd11.foundation:832717248","UMLS:C1838062","GARD:2257","MEDGEN:325326"],"synonyms":[{"name":"ADEAF","type":"exact"},{"name":"ADLTE","type":"exact"},{"name":"ADPEAF","type":"exact"},{"name":"Autosomal dominant epilepsy with auditory features","type":"exact"},{"name":"autosomal dominant epilepsy with auditory features","type":"exact"},{"name":"autosomal dominant lateral temporal lobe epilepsy","type":"exact"},{"name":"autosomal dominant partial epilepsy with auditory features","type":"related"},{"name":"epilepsy, familial temporal lobe 1","type":"narrow"},{"name":"partial epilepsy with auditory aura","type":"exact"},{"name":"partial epilepsy with auditory features","type":"exact"}],"termid":"MONDO:0010898","xrefs":{"Monarch":{"xref_id":"0010898"}}}


id: SO:0001598
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within the transcript that changes the structure of the translational product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_product_structure_variant","synonyms":[{"name":"translational product structure variant","type":"exact"}],"termid":"SO:0001598"}


id: PBO:0055464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2897","termid":"PBO:0055464"}


id: PBO:0055001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2416","termid":"PBO:0055001"}


id: PBO:0034738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensor Fra2","termid":"PBO:0034738"}


id: PR:Q8NKC2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eno102 gene.","definition_xrefs":["UniProtKB:Q8NKC2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.01c","synonyms":[{"name":"2-phospho-D-glycerate hydro-lyase 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-phosphoglycerate dehydratase 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eno102","type":"exact"}],"termid":"PR:Q8NKC2"}


id: MONDO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma characterized by the presence of atypical cartilage of variable cellularity. It may or may not be associated with the presence of myxoid areas or focal bone formation.","definition_xrefs":["NCIT:C4021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conventional osteosarcoma","termid":"MONDO:0002631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"chondroblastic osteosarcoma","secondary_identifiers":["UMLS:C0279603","ICDO:9181/3","DOID:3372","ONCOTREE:CHOS","MEDGEN:79013"],"synonyms":[{"name":"CHOS","type":"related"},{"name":"chondroblastic osteogenic sarcoma","type":"exact"},{"name":"chondroblastic osteosarcoma","type":"exact"},{"name":"chondroblastic osteosarcoma (morphologic abnormality)","type":"exact"},{"name":"chondrosarcomatous osteogenic sarcoma","type":"exact"}],"termid":"MONDO:0002627","xrefs":{"Monarch":{"xref_id":"0002627"}}}


id: PBO:0040189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 2","termid":"PBO:0040189"}


id: MONDO:0043003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of acanthosis nigricans (disease) that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acanthosis nigricans","termid":"MONDO:0007035"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial acanthosis nigricans","secondary_identifiers":["MESH:C531598","OMIM:100600","UMLS:C2930792","MEDGEN:419638"],"synonyms":[{"name":"acanthosis nigricans","type":"related"},{"name":"hereditary acanthosis nigricans (disease)","type":"exact"}],"termid":"MONDO:0043003","xrefs":{"Monarch":{"xref_id":"0043003"}}}


id: GO:0099092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane forming an electron dense disc. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic density","termid":"GO:0014069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic density, intracellular component","termid":"GO:0099092"}


id: MONDO:1012181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus epilepsy of Lafora, non-human animal","termid":"MONDO:1011627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, cattle","secondary_identifiers":["OMIA:000690-9913"],"termid":"MONDO:1012181","xrefs":{"Monarch":{"xref_id":"1012181"}}}


id: GO:0046282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ester derivatives of cinnamic acid, phenylpropenoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cinnamic acid ester metabolic process","termid":"GO:0009801"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"cinnamic acid ester catabolic process","synonyms":[{"name":"cinnamic acid ester breakdown","type":"exact"},{"name":"cinnamic acid ester catabolism","type":"exact"},{"name":"cinnamic acid ester degradation","type":"exact"}],"termid":"GO:0046282"}


id: PR:O94281
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ckb2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase II subunit beta-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.02c","synonyms":[{"name":"CK II beta-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ckb2","type":"exact"}],"termid":"PR:O94281"}


id: MONDO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pupil disorder","termid":"MONDO:0002285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"abnormal pupillary function","secondary_identifiers":["ICD9:379.49","SCTID:72124005","MEDGEN:214629","DOID:11518","HP:0007686","ICD9:379.40","UMLS:C0917967"],"synonyms":[{"name":"abnormal pupillary function","type":"exact"},{"name":"abnormal pupillary function (disease)","type":"exact"}],"termid":"MONDO:0001303","xrefs":{"Monarch":{"xref_id":"0001303"}}}


id: PBO:0035996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_mononucleate_aseptate_vegetative_cell","termid":"PBO:0035996"}


id: GO:0031563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of the mating projection in unicellular fungi exposed to mating pheromone.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"mating projection tip","termid":"GO:0043332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005938"],"is_obsolete":false,"name":"mating projection tip polarisome","termid":"GO:0031563"}


id: GO:1904596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of wound healing connective tissue replacement, which may be replaced with fibrotic material, that occurs as part of an inflammatory response.","definition_xrefs":["GOC:TermGenie","PMID:18245812","GO_REF:0000058","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of connective tissue replacement","termid":"GO:1905203"},{"relation_name":"regulates","term_name":"connective tissue replacement involved in inflammatory response wound healing","termid":"GO:0002248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"regulation of fibrosis during inflammatory response","type":"narrow"}],"termid":"GO:1904596"}


id: PBO:0066031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN guanine nucleotide release factor","termid":"PBO:0066031"}


id: GO:0003942
data:
  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97662],"is_not":false,"summary":null,"term":"GO:0003942"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-L-glutamate 5-semialdehyde + NADP+ + phosphate = N-acetyl-5-glutamyl phosphate + NADPH + H+.","definition_xrefs":["RHEA:21588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetyl-gamma-glutamyl-phosphate reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.2.1.38","MetaCyc:N-ACETYLGLUTPREDUCT-RXN"],"synonyms":[{"name":"N-acetyl-L-glutamate gamma-semialdehyde:NADP oxidoreductase (phosphorylating)","type":"related"},{"name":"N-acetyl-L-glutamate-5-semialdehyde:NADP+ 5-oxidoreductase (phosphorylating)","type":"related"},{"name":"N-acetyl-glutamate semialdehyde dehydrogenase activity","type":"related"},{"name":"N-acetylglutamate 5-semialdehyde dehydrogenase activity","type":"related"},{"name":"N-acetylglutamic gamma-semialdehyde dehydrogenase activity","type":"related"},{"name":"NAGSA dehydrogenase activity","type":"broad"},{"name":"reductase, acetyl-gamma-glutamyl phosphate","type":"related"}],"termid":"GO:0003942","terms_by_termid":{"GO:0003942":null}}


id: GO:0045186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the zonula adherens, a cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction assembly","termid":"GO:0034333"},{"relation_name":"part_of","term_name":"apical junction assembly","termid":"GO:0043297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"zonula adherens assembly","termid":"GO:0045186"}


id: GO:0033411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"UAA codon-amino acid adaptor activity","synonyms":[{"name":"TAA codon-amino acid adaptor activity","type":"exact"}],"termid":"GO:0033411"}


id: GO:0008364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a chitin-based pupal cuticle. At the end of the prepupal period the insect is covered by the pupal cuticle which continues to be elaborated into the pupal period. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development involved in chitin-based cuticle molting cycle","termid":"GO:0042337"},{"relation_name":"part_of","term_name":"pupal development","termid":"GO:0035209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pupal chitin-based cuticle development","synonyms":[{"name":"pupal cuticle anabolism","type":"broad"},{"name":"pupal cuticle formation","type":"broad"},{"name":"pupal cuticle synthesis","type":"broad"}],"termid":"GO:0008364"}


id: PATO:0000714
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000714 latency value (obsolete PATO:0000714)","termid":"PATO:0000714"}


id: PBO:0005252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cinnamoyl-CoA reductase pseudogene","termid":"PBO:0005252"}


id: PBO:0045238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 6","termid":"PBO:0045238"}


id: PBO:0067359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 457, pseudogene","termid":"PBO:0067359"}


id: PBO:0000537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GatB/YqeY domain protein","termid":"PBO:0000537"}


id: PBO:0076867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 14, intercellular bridge forming factor","termid":"PBO:0076867"}


id: GO:0047486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the eliminative degradation of polysaccharides containing 1,4-beta-D-hexosaminyl and 1,3-beta-D-glucuronosyl or 1,3-alpha-L-iduronosyl linkages to disaccharides containing 4-deoxy-beta-D-gluc-4-enuronosyl groups.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin ABC lyase activity (obsolete GO:0047486)","termid":"GO:0047486"}


id: GO:0036488
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that is composed of the transcription factor CHOP (GADD153) and a member of the C/EBP family of transcription factors.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:1547942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"CHOP-C/EBP complex","synonyms":[{"name":"CHOP-C/EBP dimer","type":"exact"},{"name":"CHOP-C/EBP heterodimer","type":"exact"},{"name":"GADD153-C/EBP complex","type":"exact"},{"name":"GADD153-C/EBP-alpha complex","type":"narrow"}],"termid":"GO:0036488"}


id: PBO:0082906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cystathionine gamma-synthase, converts cysteine into cystathionine; STR2 has a paralog, YML082W, that arose from the whole genome duplication","termid":"PBO:0082906"}


id: PBO:0056610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 2 pseudogene 1","termid":"PBO:0056610"}


id: MONDO:0019088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Post-transplant lymphoproliferative disorder (PTLD) is a polyclonal (benign) or clonal (malignant) proliferation of lymphoid cells that develops as a consequence of immunosuppression in a recipient of a solid organ or bone marrow allograft. PTLDs comprise a spectrum ranging from early, Epstein-Barr virus (EBV)-driven polyclonal lymphoid proliferations to EBV-positive or EBV- negative lymphomas of predominantly B-cell or less often T-cell type. (WHO, 2001)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"},{"relation_name":"excluded_subClassOf","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"},{"relation_name":"excluded_subClassOf","term_name":"immunodeficiency-associated lymphoproliferative disease","termid":"MONDO:0020083"},{"relation_name":"is_a","term_name":"disease related to transplantation","termid":"MONDO:0700220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-transplant lymphoproliferative disease","secondary_identifiers":["MedDRA:10051358","NCIT:C4727","MEDGEN:98160","GARD:9553","ICDO:9971/1","NORD:1950","SCTID:254290004","UMLS:C0432487","Orphanet:70568"],"synonyms":[{"name":"PTLD","type":"exact"},{"name":"post-transplant lymphoproliferative disorder","type":"exact"}],"termid":"MONDO:0019088","xrefs":{"Monarch":{"xref_id":"0019088"}}}


id: PBO:0029001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_histone_H3_at_dh_repeat","termid":"PBO:0029001"}


id: PBO:0040774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 7 pseudogene 1","termid":"PBO:0040774"}


id: PBO:0005087
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C promoter element Binding Factor","termid":"PBO:0005087"}


id: PBO:0090603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase","termid":"PBO:0090603"}


id: GO:0140579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction in which the metal ion is reduced.","definition_xrefs":["PMID:14499595"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, reducing metal ions (obsolete GO:0140579)","termid":"GO:0140579"}


id: PBO:0067032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 45, pseudogene","termid":"PBO:0067032"}


id: PBO:0026819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_central_constriction","termid":"PBO:0026819"}


id: MONDO:0013139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant severe congenital neutropenia in which the cause of the disease is a mutation in the GFI1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant severe congenital neutropenia","termid":"MONDO:0008742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0000426","MONDO:0005046"],"is_obsolete":false,"name":"neutropenia, severe congenital, 2, autosomal dominant","secondary_identifiers":["MESH:C567748","GARD:15616","MEDGEN:413975","DOID:0112131","OMIM:613107","UMLS:C2751288"],"synonyms":[{"name":"GFI1 autosomal dominant severe congenital neutropenia","type":"exact"},{"name":"SCN2","type":"related"},{"name":"autosomal dominant severe congenital neutropenia caused by mutation in GFI1","type":"exact"},{"name":"neutropenia, severe congenital 2, autosomal dominant","type":"exact"},{"name":"neutropenia, severe congenital, 2, autosomal dominant","type":"exact"}],"termid":"MONDO:0013139","xrefs":{"Monarch":{"xref_id":"0013139"}}}


id: FYPO:0003692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to oxidative stress","synonyms":[{"name":"increased protein phosphorylation during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during oxidative stress response","type":"exact"}],"termid":"FYPO:0003692"}


id: GO:0044397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of actin cortical patch localization in which the patch moves from the cell surface to the inside of the cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete actin cortical patch internalization (obsolete GO:0044397)","termid":"GO:0044397"}


id: MONDO:0008118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Odontoma-dysphagia syndrome is a malformation syndrome, characterized by odontomas (undifferentiated mass of the esophagus) and severe dysphagia.","definition_xrefs":["Orphanet:2724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontomatosis-aortae esophagus stenosis syndrome","secondary_identifiers":["UMLS:C1834013","MEDGEN:320249","OMIM:164330","MESH:C537740","GARD:238","SCTID:716180009"],"synonyms":[{"name":"Odontomatosis (multiple odontomas) with dysphagia","type":"related"},{"name":"boder syndrome","type":"exact"},{"name":"odontoma dysphagia syndrome","type":"related"},{"name":"odontoma-dysphagia syndrome","type":"related"}],"termid":"MONDO:0008118","xrefs":{"Monarch":{"xref_id":"0008118"}}}


id: PBO:0055905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 28","termid":"PBO:0055905"}


id: PBO:0066220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 25","termid":"PBO:0066220"}


id: PATO:0001190
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a bearer by virtue the bearer's being not fully grown or developed.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile","termid":"PATO:0001190"}


id: PBO:0081206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN7 ZNF cluster antisense RNA 1","termid":"PBO:0081206"}


id: PR:Q9HDU5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A galactose-1-phosphate uridylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11943:SF0","PRO:DNx","OMA:SCHPO04141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-1-phosphate uridylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.10c","secondary_identifiers":["UniProtKB:Q9HDU5"],"synonyms":[{"name":"Spom972h-GALT","type":"exact"},{"name":"UDP-glucose--hexose-1-phosphate uridylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gal-1-P uridylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDU5"}


id: MONDO:0032011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disorder defined by a set of physiological abnormalities without clearly associated clinical manifestations. [Orphanet:377790]","definition_xrefs":["Orphanet:377790"],"gene_count":0,"genotype_count":0,"name":"obsolete biological anomaly (obsolete MONDO:0032011)","termid":"MONDO:0032011","xrefs":{"Monarch":{"xref_id":"0032011"}}}


id: GO:0102343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxyicosanoyl-CoA = trans-2-icosenoyl-CoA + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.134"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-arachidoyl-CoA dehydratase activity (obsolete GO:0102343)","termid":"GO:0102343"}


id: PBO:0040472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR interacting protein","termid":"PBO:0040472"}


id: GO:0038164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the glycoprotein thrombopoietin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:19630807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thrombopoietin receptor activity","termid":"GO:0038164"}


id: PR:000050523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the dam1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dam1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC589.08c","termid":"PR:000050523"}


id: GO:0042209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen and synthesized by some higher plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orcinol metabolic process","termid":"GO:0018940"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"orcinol catabolic process","secondary_identifiers":["UM-BBD_pathwayID:orc"],"synonyms":[{"name":"orcin catabolic process","type":"exact"},{"name":"orcin catabolism","type":"exact"},{"name":"orcinol breakdown","type":"exact"},{"name":"orcinol catabolism","type":"exact"},{"name":"orcinol degradation","type":"exact"}],"termid":"GO:0042209"}


id: PBO:0077837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophoblast glycoprotein like","termid":"PBO:0077837"}


id: GO:1905131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of carcinine from one side of a membrane to the other.","definition_xrefs":["GOC:dph","GO_REF:0000070","GOC:TermGenie","PMID:26653853","PMID:26713872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"carcinine transmembrane transporter activity","termid":"GO:1905131"}


id: GO:0071547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A P granule that contains the PIWIL4-TDRD9 module, a set of proteins that act in the secondary piRNA pathway.","definition_xrefs":["GOC:sp","PMID:20011505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule","termid":"GO:0043186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"piP-body","termid":"GO:0071547"}


id: PBO:0016886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR97","termid":"PBO:0016886"}


id: GO:0019043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host, either as an integrated provirus within the host genome or as an episome, where viral genome remains in the cytoplasm or nucleus as distinct objects.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral latency","termid":"GO:0019042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of viral latency","secondary_identifiers":["GO:0075601"],"synonyms":[{"name":"lysogenic commitment","type":"exact"},{"name":"phage lysogeny","type":"narrow"}],"termid":"GO:0019043"}


id: GO:0006031
data:
  {"annotated_genes":["SJAG_02845","SJAG_00978","SJAG_00442","SJAG_04728","SJAG_04868","SJAG_03723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87707,88048,88220,102271,104139,109507],"is_not":false,"summary":null,"term":"GO:0006031"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan biosynthetic process","termid":"GO:0006023"},{"relation_name":"is_a","term_name":"chitin metabolic process","termid":"GO:0006030"},{"relation_name":"is_a","term_name":"glucosamine-containing compound biosynthetic process","termid":"GO:1901073"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00978":null,"SJAG_02845":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-6981"],"synonyms":[{"name":"beta-1,4-linked N-acetylglucosamine biosynthesis","type":"exact"},{"name":"beta-1,4-linked N-acetylglucosamine biosynthetic process","type":"exact"},{"name":"chitin anabolism","type":"exact"},{"name":"chitin biosynthesis","type":"exact"},{"name":"chitin formation","type":"exact"},{"name":"chitin synthesis","type":"exact"}],"termid":"GO:0006031","terms_by_termid":{"GO:0006031":null}}


id: PBO:0028626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_shmoo_tip","termid":"PBO:0028626"}


id: MONDO:0020249
data:
  {"annotated_genes":["SJAG_00516","SJAG_MIT15","SJAG_02656","SJAG_MIT13","SJAG_MIT03","SJAG_02641","SJAG_02384","SJAG_01183","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008134"},{"annotations":[85924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009815"},{"annotations":[85420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008858"},{"annotations":[85076,85078,85077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010788"},{"annotations":[84995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008133"},{"annotations":[85204,85203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012543"},{"annotations":[86156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007429"},{"annotations":[86090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957262"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null,"SJAG_02384":null,"SJAG_02641":null,"SJAG_02656":null,"SJAG_02848":null,"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hereditary optic neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10061323","icd11.foundation:2452831","Orphanet:98671","GARD:19540"],"termid":"MONDO:0020249","terms_by_termid":{"MONDO:0007429":null,"MONDO:0008133":null,"MONDO:0008134":null,"MONDO:0008858":null,"MONDO:0009815":null,"MONDO:0010788":null,"MONDO:0012543":null,"MONDO:0957262":null},"xrefs":{"Monarch":{"xref_id":"0020249"}}}


id: PBO:0091613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Klf1","termid":"PBO:0091613"}


id: PBO:0061184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 14-1","termid":"PBO:0061184"}


id: PBO:0087387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol transport protein and functional homolog of human NPC2/He1; acts with Ncr1p in sterol trafficking; human NPC2 is a cholesterol-binding protein whose deficiency causes Niemann-Pick type C2 disease involving retention of cholesterol in lysosomes; yeast NPC2 can complement mutations in human NPC2","termid":"PBO:0087387"}


id: GO:1903814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of collecting lymphatic vessel constriction.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23897233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"regulates","term_name":"collecting lymphatic vessel constriction","termid":"GO:1990192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collecting lymphatic vessel constriction","synonyms":[{"name":"regulation of lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1903814"}


id: GO:0042825
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer composed of the subunits TAP1 and TAP2 (transporter associated with antigen presentation). Functions in the transport of antigenic peptides from the cytosol to the lumen of the endoplasmic reticulum.","definition_xrefs":["PMID:10618487","GOC:jl","PMID:10631934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"MHC class I peptide loading complex","termid":"GO:0042824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005789","GO:0005783","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TAP complex","synonyms":[{"name":"transporter associated with antigen presentation","type":"exact"}],"termid":"GO:0042825"}


id: PBO:0051209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-55 (pseudogene)","termid":"PBO:0051209"}


id: GO:0062210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regeneration process by which a damaged or lost shoot regrows or re-differentiates. This process may occur via de-differentiation and subsequent reprogramming of somatic cells or activation of existing undifferentiated (meristematic) cells to produce a new shoot meristem and subsequently a new shoot.","definition_xrefs":["PMID:27143753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot regeneration","synonyms":[{"name":"shoot system regeneration","type":"exact"}],"termid":"GO:0062210"}


id: FYPO:0007033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of fluconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to fluconazole","synonyms":[{"name":"resistance to fluconazole during mitotic cell cycle","type":"related"},{"name":"resistance to fluconazole during vegetative growth","type":"exact"},{"name":"resistant to fluconazole","type":"exact"}],"termid":"FYPO:0007033"}


id: MONDO:1011961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachygnathia, cardiomegaly and renal hypoplasia syndrome, non-human animal","secondary_identifiers":["OMIA:001595"],"termid":"MONDO:1011961","xrefs":{"Monarch":{"xref_id":"1011961"}}}


id: MONDO:0018509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the small intestine. It is composed of malignant squamous cells.","definition_xrefs":["NCIT:C43534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"small intestine carcinoma","termid":"MONDO:0005522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"squamous cell carcinoma of the small intestine","secondary_identifiers":["GARD:21764","UMLS:C1710111","MEDGEN:313711","Orphanet:423968"],"synonyms":[{"name":"small intestinal squamous cell cancer","type":"exact"},{"name":"small intestinal squamous cell carcinoma","type":"exact"},{"name":"small intestine squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of the small bowel","type":"exact"}],"termid":"MONDO:0018509","xrefs":{"Monarch":{"xref_id":"0018509"}}}


id: PBO:0111066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA, antisense cnt5","termid":"PBO:0111066"}


id: PBO:0041804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 14","termid":"PBO:0041804"}


id: MONDO:0015538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare dendritic cell tumor composed of spindle to ovoid cells with a phenotype that is similar to the Langerhans cells. Patients usually present with cutaneous papules, nodules, and plaques. Systemic symptoms are usually absent. The clinical course is variable.","definition_xrefs":["NCIT:C81767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytic and dendritic cell neoplasm","termid":"MONDO:0006247"},{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"indeterminate dendritic cell tumor","secondary_identifiers":["SCTID:721313009","MEDGEN:415159","ONCOTREE:IDCT","Orphanet:158019","GARD:20022","UMLS:C2825741"],"synonyms":[{"name":"IDCT","type":"related"},{"name":"indeterminate Dendritic cell tumor","type":"exact"},{"name":"indeterminate Dendritic cell tumour","type":"exact"},{"name":"indeterminate cell histiocytosis","type":"exact"},{"name":"indeterminate dendritic cell tumor","type":"exact"}],"termid":"MONDO:0015538","xrefs":{"Monarch":{"xref_id":"0015538"}}}


id: MONDO:0013590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive Stickler syndrome in which the cause of the disease is a mutation in the COL9A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Stickler syndrome","termid":"MONDO:0019354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"Stickler syndrome, type 4","secondary_identifiers":["GARD:18358","OMIM:614134","UMLS:C3279941","MEDGEN:481571"],"synonyms":[{"name":"COL9A1 autosomal recessive Stickler syndrome","type":"exact"},{"name":"STICKLER syndrome, type IV","type":"related"},{"name":"STL4","type":"related"},{"name":"autosomal recessive Stickler syndrome caused by mutation in COL9A1","type":"exact"}],"termid":"MONDO:0013590","xrefs":{"Monarch":{"xref_id":"0013590"}}}


id: PBO:0068971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 215, pseudogene","termid":"PBO:0068971"}


id: PR:000037317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein complex that is composed of a dimer of phosphorylated Crb2.","definition_xrefs":["PMID:24074952","PomBase:AL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crb2 dimer (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC342.05","synonyms":[{"name":"DNA repair protein rhp9 dimer","type":"exact"}],"termid":"PR:000037317"}


id: PBO:0065174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin receptor 2","termid":"PBO:0065174"}


id: GO:0002842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a T cell mediated immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"is_a","term_name":"positive regulation of immune response to tumor cell","termid":"GO:0002839"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immune response to tumor cell","termid":"GO:0002840"},{"relation_name":"positively_regulates","term_name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell mediated immune response to tumor cell","synonyms":[{"name":"activation of T cell mediated immune response to tumor cell","type":"narrow"},{"name":"positive regulation of T cell mediated immune response to tumour cell","type":"exact"},{"name":"positive regulation of T lymphocyte mediated immune response to tumor cell","type":"exact"},{"name":"positive regulation of T-cell mediated immune response to tumor cell","type":"exact"},{"name":"positive regulation of T-lymphocyte mediated immune response to tumor cell","type":"exact"},{"name":"stimulation of T cell mediated immune response to tumor cell","type":"narrow"},{"name":"up regulation of T cell mediated immune response to tumor cell","type":"exact"},{"name":"up-regulation of T cell mediated immune response to tumor cell","type":"exact"},{"name":"upregulation of T cell mediated immune response to tumor cell","type":"exact"}],"termid":"GO:0002842"}


id: PBO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_3'-5'-exoribonuclease_activity","termid":"PBO:0030177"}


id: GO:0030076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-pigment complex that may be closely or peripherally associated to photosynthetic reaction centers that participate in harvesting and transferring radiant energy to the reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"light-harvesting complex","secondary_identifiers":["Wikipedia:Light-harvesting_complex"],"synonyms":[{"name":"antenna complex","type":"related"}],"termid":"GO:0030076"}


id: MONDO:0035682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fibrous dysplasia/McCune-Albright syndrome (obsolete MONDO:0035682)","secondary_identifiers":["Orphanet:595216"],"synonyms":[{"name":"FD/MAS spectrum","type":"exact"},{"name":"FD/MAS syndrome","type":"exact"},{"name":"Fibrous dysplasia/McCune-Albright spectrum","type":"exact"}],"termid":"MONDO:0035682","xrefs":{"Monarch":{"xref_id":"0035682"}}}


id: PBO:0041481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 87","termid":"PBO:0041481"}


id: PBO:0007025
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds PLD site 5'-AGTTTACGTAATCT-3'","termid":"PBO:0007025"}


id: MONDO:0016417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital ichthyosis-microcephalus-tetraplegia syndrome","secondary_identifiers":["Orphanet:2271","UMLS:C5679626","GARD:1489","MEDGEN:1809863"],"synonyms":[{"name":"congenital ichthyosis-microcephalus-quadriplegia syndrome","type":"exact"}],"termid":"MONDO:0016417","xrefs":{"Monarch":{"xref_id":"0016417"}}}


id: PBO:0085414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane sulfite pump involved in sulfite metabolism; required for efficient sulfite efflux; major facilitator superfamily protein","termid":"PBO:0085414"}


id: GO:0005604
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen-containing extracellular matrix consisting of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers.","definition_xrefs":["ISBN:0198547684","PMID:22505934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basement membrane","secondary_identifiers":["GO:0008003","Wikipedia:Basement_membrane","GO:0005605"],"synonyms":[{"name":"basal lamina","type":"related"},{"name":"basement lamina","type":"related"},{"name":"lamina densa","type":"related"}],"termid":"GO:0005604"}


id: MONDO:0003201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esophagus adenocarcinoma (obsolete MONDO:0003201)","termid":"MONDO:0003201","xrefs":{"Monarch":{"xref_id":"0003201"}}}


id: FYPO:0005629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein having high molecular mass due to polySUMO conjugation is greater than normal.","definition_xrefs":["PMID:26221037","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased cellular HMW SUMO conjugate level","synonyms":[{"name":"accumulation of HMW SUMO conjugates","type":"exact"},{"name":"accumulation of high molecular mass SUMO conjugates","type":"exact"},{"name":"accumulation of high molecular weight SUMO conjugates","type":"exact"},{"name":"increased HMW SUMO conjugate accumulation","type":"related"},{"name":"increased cellular HMW SUMO conjugate level during mitotic cell cycle","type":"related"},{"name":"increased cellular HMW SUMO conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular mass SUMO conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular weight SUMO conjugate level during vegetative growth","type":"exact"}],"termid":"FYPO:0005629"}


id: PBO:0084656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor succinate dehydrogenase isozyme; participates in oxidation of succinate and transfer of electrons to ubiquinone; induced during the diauxic shift in a Cat8p-dependent manner; YJL045W has a paralog, SDH1, that arose from the whole genome duplication","termid":"PBO:0084656"}


id: PBO:0067846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 148","termid":"PBO:0067846"}


id: SO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA segment that ranges from about -250 to -40 relative to +1 of RNA transcription start site, where sequence specific DNA-binding transcription factors binds, such as Sp1, CTF (CCAAT-binding transcription factor), and CBF (CCAAT-box binding factor).","definition_xrefs":["PMID:12515390","PMID:9679020","SO:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proximal_promoter_element","synonyms":[{"name":"proximal promoter element","type":"related"},{"name":"specific transcription factor binding site","type":"related"}],"termid":"SO:0001668"}


id: GO:0018752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: epsilon-caprolactam + H2O = H+ + 6-aminohexanoate.","definition_xrefs":["UM-BBD_reactionID:r0448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"epsilon-caprolactam lactamase activity","secondary_identifiers":["MetaCyc:R561-RXN"],"termid":"GO:0018752"}


id: PBO:0002814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial type I [2Fe-2S] ferredoxin Etp1/ cytochrome oxidase cofactor Cox15, fusion","termid":"PBO:0002814"}


id: GO:0031694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-2A adrenergic receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"alpha-2A adrenergic receptor binding","synonyms":[{"name":"alpha-2A adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031694"}


id: RO:0002583
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence starts at point y if and only if the time point at which x starts is equivalent to the time point at which y ends.","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_at_point","termid":"RO:0002583"}


id: PBO:0026995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiosis_I","termid":"PBO:0026995"}


id: PR:O14174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt20 gene.","definition_xrefs":["UniProtKB:O14174","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit spt20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.10c","synonyms":[{"name":"Spom972h-spt20","type":"exact"}],"termid":"PR:O14174"}


id: PBO:0082580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cholinephosphotransferase; required for phosphatidylcholine biosynthesis and for inositol-dependent regulation of EPT1 transcription; CPT1 has a paralog, EPT1, that arose from the whole genome duplication","termid":"PBO:0082580"}


id: CHEBI:38338
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopyrimidine","termid":"CHEBI:38338"}


id: FYPO:0004607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle pole body morphology","synonyms":[{"name":"abnormal SPB morphology","type":"exact"},{"name":"abnormal spindle pole body structure","type":"narrow"}],"termid":"FYPO:0004607"}


id: PBO:0089600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor Gdi1","termid":"PBO:0089600"}


id: PBO:0046098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 1","termid":"PBO:0046098"}


id: PBO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Xdj1 (predicted)","termid":"PBO:0004381"}


id: PBO:0028548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0028548"}


id: MONDO:1010626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune thrombocytopenia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia, non-human animal","termid":"MONDO:1010069"},{"relation_name":"is_a","term_name":"thrombocytopenia, domestic cat","termid":"MONDO:1010660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thrombocytopenia, domestic cat","secondary_identifiers":["OMIA:000095-9685"],"termid":"MONDO:1010626","xrefs":{"Monarch":{"xref_id":"1010626"}}}


id: MONDO:0021932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trypanosomiasis caused by infection by Trypanosoma brucei gambiense.","definition_xrefs":["NCIT:C35084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human African trypanosomiasis","termid":"MONDO:0005459"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"parasitic skin disorder","termid":"MONDO:0024610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"infection by Trypanosoma gambiense","secondary_identifiers":["SCTID:75809006","ICD9:086.3","UMLS:C0041232","MEDGEN:11933"],"synonyms":[{"name":"Gambian sleeping sickness","type":"related"},{"name":"Gambian trypanosomiasis","type":"related"},{"name":"Gambiense trypanosomiasis infection","type":"related"},{"name":"Infection by Trypanosoma gambiense","type":"exact"},{"name":"Infection caused by Trypanosoma gambiense","type":"related"},{"name":"chronic sleeping sickness","type":"related"}],"termid":"MONDO:0021932","xrefs":{"Monarch":{"xref_id":"0021932"}}}


id: GO:0005522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"profilin binding","termid":"GO:0005522"}


id: GO:0003680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA structure formed by the minor groove of adenine-thymine-rich DNA regions. Examples of proteins having this function are AT-rich interaction domain (ARID)-containing proteins.","definition_xrefs":["PMID:26223912","GOC:jl","PMID:2670564","PMID:15802641","PMID:10545119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"minor groove of adenine-thymine-rich DNA binding","synonyms":[{"name":"AT DNA binding","type":"exact"},{"name":"AT binding","type":"exact"},{"name":"AT-rich DNA binding","type":"exact"}],"termid":"GO:0003680"}


id: GO:0060386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a synapse within a target tissue in which a nerve is invading.","definition_xrefs":["GOC:dph","GOC:pr","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse assembly","termid":"GO:0007416"},{"relation_name":"part_of","term_name":"innervation","termid":"GO:0060384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"synapse assembly involved in innervation","synonyms":[{"name":"synapse biogenesis involved in innervation","type":"exact"},{"name":"synaptogenesis involved in innervation","type":"exact"}],"termid":"GO:0060386"}


id: GO:1905359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","PMID:26696398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to meiotic spindle","synonyms":[{"name":"protein localisation to meiotic spindle","type":"exact"}],"termid":"GO:1905359"}


id: SO:0000992
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA that has been inserted into the bacterial genome using a bacterial artificial chromosome.","direct_ancestors":[{"relation_name":"derives_from","term_name":"BAC","termid":"SO:0000153"},{"relation_name":"is_a","term_name":"cloned_genomic_insert","termid":"SO:0000914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC_cloned_genomic_insert","synonyms":[{"name":"BAC cloned genomic insert","type":"exact"}],"termid":"SO:0000992"}


id: FYPO:0005934
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the sumoylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein sumoylation during vegetative growth","termid":"FYPO:0002777"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein sumoylation during vegetative growth","synonyms":[{"name":"abolished protein sumoylation during mitotic cell cycle","type":"related"},{"name":"protein sumoylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005934"}


id: GO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA-RNA complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex organization","synonyms":[{"name":"protein-DNA-RNA complex subunit organisation","type":"exact"}],"termid":"GO:0001115"}


id: PBO:0073347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 8 pseudogene 1","termid":"PBO:0073347"}


id: GO:0022855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + glucose(out) = protein histidine + glucose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0016740","GO:0003674","GO:0003824","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-glucose phosphotransferase system transporter activity","synonyms":[{"name":"glucose PTS transporter activity","type":"exact"}],"termid":"GO:0022855"}


id: SO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a proplastid such as an immature chloroplast.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proplastid_sequence","synonyms":[{"name":"proplastid sequence","type":"exact"}],"termid":"SO:0000748"}


id: PBO:0038613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like","termid":"PBO:0038613"}


id: FYPO:0002039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of deadenylation-independent decapping of nuclear-transcribed mRNA is decreased. All RNA decapping may be decreased, or one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"FYPO:0002038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA during mitotic cell cycle","type":"related"},{"name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA during vegetative growth","type":"exact"},{"name":"reduced deadenylation-independent decapping of nuclear-transcribed mRNA","type":"exact"}],"termid":"FYPO:0002039"}


id: PBO:0081547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 467","termid":"PBO:0081547"}


id: FYPO:0006492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which chitin synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal chitin synthase activity","termid":"FYPO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished chitin synthase activity","synonyms":[{"name":"chitin synthase activity abolished","type":"exact"}],"termid":"FYPO:0006492"}


id: RO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a motor neuron and a muscle that it synapses to via a type Is bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_to","termid":"RO:0002120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_via_type_Is_bouton_to","termid":"RO:0002106"}


id: PBO:0053966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1276","termid":"PBO:0053966"}


id: PBO:0081806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 735","termid":"PBO:0081806"}


id: FYPO:0003312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR formyltransferase) activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphoribosylaminoimidazolecarboxamide formyltransferase activity","termid":"FYPO:0003311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abolished phosphoribosylaminoimidazolecarboxamide formyltransferase activity","synonyms":[{"name":"abolished AICAR formyltransferase activity","type":"exact"},{"name":"phosphoribosylaminoimidazolecarboxamide formyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0003312"}


id: MONDO:0006008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic inflammation of the vestibular nerve, characterized clinically by the acute or subacute onset of vertigo; nausea; and imbalance. The cochlear nerve is typically spared and hearing loss and tinnitus do not usually occur. Symptoms usually resolve over a period of days to weeks. (Adams et al., Principles of Neurology, 6th ed, p304)","definition_xrefs":["MESH:D020338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibulocochlear nerve disorder","termid":"MONDO:0001563"},{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"vestibular neuronitis","secondary_identifiers":["DOID:12683","ICD10CM:H81.2","MEDGEN:155655","UMLS:C0751908","SCTID:186738001","ICD9:078.81","ICD9:386.12","EFO:0007537"],"synonyms":[{"name":"epidemic neurolabyrinthitis","type":"exact"},{"name":"vestibular neuritis","type":"exact"}],"termid":"MONDO:0006008","xrefs":{"Monarch":{"xref_id":"0006008"}}}


id: MOD:01010
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a trifluoroacetyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifluoroacetylated residue","synonyms":[{"name":"TFA","type":"exact"}],"termid":"MOD:01010"}


id: MONDO:0008169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrodysplasia, rhizomelic, with callosal agenesis, thrombocytopenia, hydrocephalus, and hypertension","secondary_identifiers":["OMIM:166990","UMLS:C1833688","MESH:C563478","MEDGEN:322254"],"synonyms":[{"name":"osteochondrodysplasia with rhizomelia, platyspondyly, callosal agenesis, thrombocytopenia, hydrocephalus, and hypertension","type":"related"},{"name":"osteochondrodysplasia, rhizomelic, with callosal agenesis, thrombocytopenia, hydrocephalus, and hypertension","type":"exact"}],"termid":"MONDO:0008169","xrefs":{"Monarch":{"xref_id":"0008169"}}}


id: GO:0140569
data:
  {"annotated_genes":["SJAG_01435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100507],"is_not":false,"summary":null,"term":"GO:0140569"}]},"cv_name":"biological_process","definition":"The removal of a mislocalized protein from the endoplasmic reticulum (ER) membrane.","definition_xrefs":["PMID:32973005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraction of mislocalized protein from membrane","termid":"GO:0140568"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"extraction of mislocalized protein from ER membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140569","terms_by_termid":{"GO:0140569":null}}


id: MONDO:0017771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spectrum of Mullerian duct anomalies characterized by congenital aplasia of the uterus and upper 2/3 of the vagina in otherwise phenotypically normal females. It can be classified as either MRKH syndrome type 1 (corresponding to isolated utero-vaginal aplasia) or MRKH syndrome type 2 (utero-vaginal aplasia associated with other malformations).","definition_xrefs":["Orphanet:3109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial bilateral aplasia of the mullerian ducts","termid":"MONDO:0015830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mayer-Rokitansky-Kuster-Hauser syndrome","secondary_identifiers":["DOID:0112177","NORD:1412","UMLS:C0431648","MedDRA:10065148","NCIT:C124853","GARD:5445","SCTID:8793008","MEDGEN:140915"],"synonyms":[{"name":"MRKH","type":"exact"},{"name":"MRKH syndrome","type":"exact"},{"name":"Mayer-Rokitansky-Küster-Hauser Syndrome","type":"exact"},{"name":"Mayer-Rokitansky-Küster-Hauser syndrome","type":"related"},{"name":"Mullerian aplasia/dysgenesis","type":"exact"},{"name":"Rokitansky Kuster Hauser syndrome","type":"exact"},{"name":"Rokitansky syndrome","type":"exact"}],"termid":"MONDO:0017771","xrefs":{"Monarch":{"xref_id":"0017771"}}}


id: GO:0060278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:dph","GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ovulation","termid":"GO:0060278"}


id: MONDO:0015657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inflammatory and autoimmune disease with epilepsy (obsolete MONDO:0015657)","secondary_identifiers":["Orphanet:166484"],"termid":"MONDO:0015657","xrefs":{"Monarch":{"xref_id":"0015657"}}}


id: PBO:0034139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homoplasy_relationship_with","termid":"PBO:0034139"}


id: MONDO:1012373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"retinal dysplasia and degeneration, non-human animal","termid":"MONDO:1011988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dysplasia and degeneration, chicken","secondary_identifiers":["OMIA:001366-9031"],"termid":"MONDO:1012373","xrefs":{"Monarch":{"xref_id":"1012373"}}}


id: PBO:0031330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chloramphenicol","termid":"PBO:0031330"}


id: GO:1905251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any epidermal growth factor receptor signaling pathway that is involved in heart process.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:23069713","GOC:bc","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"part_of","term_name":"heart process","termid":"GO:0003015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"EGFR signaling pathway involved in heart process","type":"exact"},{"name":"ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905251"}


id: SO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An instance of a self-interacting DNA region flanked by left and right TAD boundaries.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topologically_defined_region","termid":"SO:0001412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_associated_domain","synonyms":[{"name":"TAD","type":"exact"},{"name":"topologically associated domain","type":"exact"}],"termid":"SO:0002304"}


id: PBO:0089572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3e","termid":"PBO:0089572"}


id: PBO:0078673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 6-1","termid":"PBO:0078673"}


id: MONDO:0017175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Machado-Joseph disease type 2 is a subtype of Machado-Joseph disease (SCA3/MJD) with intermediate severity characterized by an intermediate age of onset, cerebellar ataxia and external progressive ophthalmoplegia, with variable pyramidal and extrapyramidal signs.","definition_xrefs":["Orphanet:276241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Machado-Joseph disease","termid":"MONDO:0007182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"Machado-Joseph disease type 2","secondary_identifiers":["icd11.foundation:1775824880","GARD:21049","SCTID:91954009","UMLS:C0751669","MEDGEN:199707"],"synonyms":[{"name":"SCA3, Thomas type","type":"exact"},{"name":"azorean disease, type ii","type":"exact"},{"name":"spinocerebellar ataxia, Thomas type","type":"exact"}],"termid":"MONDO:0017175","xrefs":{"Monarch":{"xref_id":"0017175"}}}


id: PBO:0000645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrolase (predicted)","termid":"PBO:0000645"}


id: PBO:0001491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Msa1","termid":"PBO:0001491"}


id: GO:0039013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pronephric nephron distal tubule are generated and organized. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"},{"relation_name":"is_a","term_name":"distal tubule morphogenesis","termid":"GO:0072156"},{"relation_name":"part_of","term_name":"pronephric distal tubule development","termid":"GO:0035777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric distal tubule morphogenesis","termid":"GO:0039013"}


id: PBO:0113412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated co-chaperone; zuotin functions in ribosome biogenesis and as a chaperone for nascent polypeptide chains with Ssz1p and Ssb1/2p; subunit of the ribosome-associated complex (RAC) that stimulates Ssb1/2p ATPase activity to facilitate interaction with nascent polypeptide chains emerging from the ribosome exit tunnel; regulates translation upon inhibition of TORC1; contains a DnaJ domain; human gene DNAJC2 partially complements the yeast zuo1 null mutant","termid":"PBO:0113412"}


id: GO:0036382
data:
  {"annotated_genes":["SJAG_01668"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87225],"is_not":false,"summary":null,"term":"GO:0036382"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a reduced flavin + NAD+ = an oxidized flavin + 2 H+ + NADH.","definition_xrefs":["GOC:rs","RHEA:31303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"flavin reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12446","EC:1.5.1.36","KEGG_REACTION:R09662"],"termid":"GO:0036382","terms_by_termid":{"GO:0036382":null}}


id: PR:O13715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 5 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.08","synonyms":[{"name":"Spom972h-mug5","type":"exact"}],"termid":"PR:O13715"}


id: PBO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degradation is independent of association with Pcu4-DDb1-CSN complex","termid":"PBO:0001303"}


id: PBO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Ace2","termid":"PBO:0001951"}


id: PBO:0049814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 6","termid":"PBO:0049814"}


id: GO:0038185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a bile acid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:36409000","PMID:10334992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid signaling pathway","termid":"GO:0038183"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nuclear receptor-mediated bile acid signaling pathway","synonyms":[{"name":"BAR signaling pathway","type":"related"},{"name":"FXR signaling pathway","type":"exact"},{"name":"farnesoid X receptor signaling pathway","type":"exact"},{"name":"intracellular bile acid receptor signaling pathway","type":"exact"},{"name":"nuclear bile acid receptor signaling pathway","type":"related"}],"termid":"GO:0038185"}


id: PBO:0040495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A and ninein interacting protein","termid":"PBO:0040495"}


id: PBO:0110196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex associated protein","termid":"PBO:0110196"}


id: PBO:0086282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a putative role in response to acid stress; null mutant is sensitive to acetic acid; transcription is regulated by Haa1p and induced in the presence of acetic acid; protein observed in plasma membrane foci in the presence of acetic acid; the authentic, non-tagged protein is detected in a phosphorylated state in highly purified mitochondria in high-throughput studies","termid":"PBO:0086282"}


id: PBO:0077006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 8","termid":"PBO:0077006"}


id: PBO:0074891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 66","termid":"PBO:0074891"}


id: GO:0140567
data:
  {"annotated_genes":["SJAG_01435","SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100513,115754],"is_not":false,"summary":null,"term":"GO:0140567"}]},"cv_name":"molecular_function","definition":"The activity of removing a protein from a membrane, by binding to a transmembrane helical fragment of a tail-anchored protein and releasing it from the the hydrophobic region of one or both lipid bilayers. The reaction is driven by ATP hydrolysis.","definition_xrefs":["PMID:24821790","PMID:32973005","PMID:28712723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transporter activity","termid":"GO:0140318"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01435":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140318"}],"interesting_parent_ids":["GO:0140318","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"membrane protein dislocase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"transmembrane helix dislocasentransmembrane protein dislocase activity","type":"related"}],"termid":"GO:0140567","terms_by_termid":{"GO:0140567":null}}


id: PBO:0009350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP helicase Irc3 (predicted)","termid":"PBO:0009350"}


id: PBO:0067075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 106, pseudogene","termid":"PBO:0067075"}


id: PBO:0072378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 4","termid":"PBO:0072378"}


id: FYPO:0003182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister chromatids are not segregated equally to the two spindle poles in the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:10440376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal meiotic chromosome segregation","termid":"FYPO:0000925"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"sister chromatid nondisjunction at meiosis II","secondary_identifiers":["FYPO:0003605","FYPO:0006416"],"synonyms":[{"name":"abnormal chromosome disjunction during meiosis II","type":"exact"},{"name":"abnormal meiotic sister chromatid disjunction","type":"exact"},{"name":"abolished meiotic sister chromatid separation","type":"related"},{"name":"meiosis II nondisjunction","type":"related"},{"name":"nondisjunction at meiosis II","type":"exact"},{"name":"nondisjunction of sister chromatids in meiosis II","type":"exact"},{"name":"unequal meiotic chromosome segregation during meiosis II","type":"exact"},{"name":"unequal meiotic sister chromatid segregation in meiosis II","type":"exact"}],"termid":"FYPO:0003182"}


id: PBO:0042854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 68","termid":"PBO:0042854"}


id: MONDO:0015985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Bone dysplasia Azouz type is a form of generalized enchondromatosis with involvement of the spine (so called spondyloenchondromatosis). Spondyloenchondromatosis is a very rare skeletal dysplasia characterized by severe platyspondyly, and mild involvement of hands and feet.","definition_xrefs":["Orphanet:1844"],"gene_count":0,"genotype_count":0,"name":"obsolete bone dysplasia, Azouz type (obsolete MONDO:0015985)","secondary_identifiers":["GARD:920","icd11.foundation:2054115498","UMLS:C4303993","MEDGEN:929662","SCTID:720566004"],"synonyms":[{"name":"bone dysplasia Azouz type","type":"related"}],"termid":"MONDO:0015985","xrefs":{"Monarch":{"xref_id":"0015985"}}}


id: PBO:0004089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein Hba1","termid":"PBO:0004089"}


id: MONDO:1011107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephropathy in dogs in which the cause of the disease is a mutation in the COL4A4 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"nephropathy, dog","termid":"MONDO:1012186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, COL4A4-related, dog","secondary_identifiers":["OMIA:002618-9615"],"termid":"MONDO:1011107","xrefs":{"Monarch":{"xref_id":"1011107"}}}


id: GO:2000064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cortisol biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid biosynthetic process","termid":"GO:0031946"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"cortisol biosynthetic process","termid":"GO:0034651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of cortisol biosynthetic process","synonyms":[{"name":"regulation of cortisol anabolism","type":"related"},{"name":"regulation of cortisol biosynthesis","type":"exact"},{"name":"regulation of cortisol formation","type":"exact"},{"name":"regulation of cortisol synthesis","type":"exact"}],"termid":"GO:2000064"}


id: PBO:0059567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1J, pseudogene","termid":"PBO:0059567"}


id: PBO:0044734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 2","termid":"PBO:0044734"}


id: GO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class I.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"regulation of peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0002589"}


id: GO:1904690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytoplasmic translational initiation.","definition_xrefs":["PMID:12242291","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation","termid":"GO:0045948"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"positively_regulates","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0002181"],"is_obsolete":false,"name":"positive regulation of cytoplasmic translational initiation","synonyms":[{"name":"activation of cytoplasmic translational initiation","type":"narrow"},{"name":"up regulation of cytoplasmic translational initiation","type":"exact"},{"name":"up-regulation of cytoplasmic translational initiation","type":"exact"},{"name":"upregulation of cytoplasmic translational initiation","type":"exact"}],"termid":"GO:1904690"}


id: MONDO:0030673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 86, autosomal recessive","secondary_identifiers":["MEDGEN:1801286","Orphanet:631085","OMIM:619735","UMLS:C5676910","DOID:0112342"],"synonyms":[{"name":"SPG86","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 86","type":"exact"},{"name":"spastic paraplegia 86, autosomal recessive","type":"exact"}],"termid":"MONDO:0030673","xrefs":{"Monarch":{"xref_id":"0030673"}}}


id: PBO:0017667
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"new inducer of mitosis","termid":"PBO:0017667"}


id: PBO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromosomal_translocation","termid":"PBO:0030464"}


id: PBO:0054140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1506","termid":"PBO:0054140"}


id: GO:0033428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"CAG codon-amino acid adaptor activity","synonyms":[{"name":"glutamine tRNA","type":"related"}],"termid":"GO:0033428"}


id: GO:0030225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized monocyte acquires the specialized features of a macrophage.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"},{"relation_name":"is_a","term_name":"mononuclear cell differentiation","termid":"GO:1903131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage differentiation","synonyms":[{"name":"macrophage cell differentiation","type":"exact"}],"termid":"GO:0030225"}


id: PR:O14138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25A8.03c gene.","definition_xrefs":["UniProtKB:O14138","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.03c","synonyms":[{"name":"Spom972h-SPAC25A8.03c","type":"exact"},{"name":"protein midA homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14138"}


id: GO:1901924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sclerotium development.","definition_xrefs":["GOC:TermGenie","PMID:21148914","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of sclerotium development","termid":"GO:1901922"},{"relation_name":"positively_regulates","term_name":"sclerotium development","termid":"GO:1990045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sclerotium development","synonyms":[{"name":"activation of sclerotium development","type":"narrow"},{"name":"up regulation of sclerotium development","type":"exact"},{"name":"up-regulation of sclerotium development","type":"exact"},{"name":"upregulation of sclerotium development","type":"exact"}],"termid":"GO:1901924"}


id: GO:0106395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"},{"relation_name":"positively_regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"positive regulation of palmitic acid catabolic process","termid":"GO:0106395"}


id: PBO:0043387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 1","termid":"PBO:0043387"}


id: PBO:0044357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 44","termid":"PBO:0044357"}


id: PBO:0026859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_in_anaphase-promoting_complex","termid":"PBO:0026859"}


id: GO:1902388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a ceramide 1-phosphate from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GOC:TermGenie","PMID:23863933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"},{"relation_name":"is_a","term_name":"ceramide transfer activity","termid":"GO:0120017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0120013"],"is_obsolete":false,"name":"ceramide 1-phosphate transfer activity","secondary_identifiers":["Reactome:R-HSA-5339535"],"synonyms":[{"name":"ceramide 1-phosphate carrier activity","type":"exact"},{"name":"ceramide 1-phosphate transporter activity","type":"broad"},{"name":"intermembrane ceramide 1-phosphate transfer activity","type":"narrow"}],"termid":"GO:1902388"}


id: PBO:0002465
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat containing","termid":"PBO:0002465"}


id: GO:0019931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form N6-3,4-didehydroretinylidene-L-lysine.","definition_xrefs":["RESID:AA0312"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-N6-3-dehydroretinal-L-lysine (obsolete GO:0019931)","termid":"GO:0019931"}


id: PBO:0040666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBX high mobility group box domain containing","termid":"PBO:0040666"}


id: PBO:0079933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA biogenesis phosphodiesterase 1","termid":"PBO:0079933"}


id: MONDO:0013265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 17","secondary_identifiers":["UMLS:C3150693","MEDGEN:462043","OMIM:613436"],"synonyms":[{"name":"AUTS17","type":"related"},{"name":"autism susceptibility 17","type":"exact"},{"name":"autism, susceptibility to, 17","type":"exact"},{"name":"autism, susceptibility to, type 17","type":"exact"},{"name":"susceptibility to autism 17","type":"related"}],"termid":"MONDO:0013265","xrefs":{"Monarch":{"xref_id":"0013265"}}}


id: MONDO:0018080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare germ cell tumor.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare germ cell tumor (obsolete MONDO:0018080)","secondary_identifiers":["SCTID:402878003","Orphanet:3399"],"synonyms":[{"name":"germ cell tumor","type":"broad"},{"name":"rare germ cell tumor","type":"exact"}],"termid":"MONDO:0018080","xrefs":{"Monarch":{"xref_id":"0018080"}}}


id: GO:0120202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stack of disc membranes located inside a rod photoreceptor outer segment, and containing densely packed molecules of rhodopsin photoreceptor proteins that traverse the lipid bilayer. It is thought that rod disc membranes arise as evaginations of the ciliary membrane near the base of the outer segment, which then become completely separated from the ciliary membrane, during the development of the rod outer segment.","definition_xrefs":["GOC:pde","PMID:19501669","PMID:6771304","PMID:26574505","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"photoreceptor disc membrane","termid":"GO:0097381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"rod photoreceptor disc membrane","termid":"GO:0120202"}


id: MONDO:0017748
data:
  {"annotated_genes":["SJAG_06383","SJAG_04975","SJAG_04165","SJAG_01416","SJAG_03506","SJAG_00295","SJAG_00068","SJAG_02523","SJAG_04881","SJAG_00846","SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010221"},{"annotations":[84739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012465"},{"annotations":[85853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009398"},{"annotations":[85692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013882"},{"annotations":[86118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014318"},{"annotations":[86396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014457"},{"annotations":[85299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014780"},{"annotations":[85134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014832"},{"annotations":[85494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013563"},{"annotations":[86423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010466"},{"annotations":[85489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014165"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00846":null,"SJAG_01416":null,"SJAG_02523":null,"SJAG_03115":null,"SJAG_03506":null,"SJAG_04165":null,"SJAG_04881":null,"SJAG_04975":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:309515","UMLS:C5679954","GARD:21342","MEDGEN:1842274"],"synonyms":[{"name":"disorder of glycosphingolipid and GPI-anchored proteins glycosylation","type":"exact"},{"name":"disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","type":"related"}],"termid":"MONDO:0017748","terms_by_termid":{"MONDO:0009398":null,"MONDO:0010221":null,"MONDO:0010466":null,"MONDO:0012465":null,"MONDO:0013563":null,"MONDO:0013882":null,"MONDO:0014165":null,"MONDO:0014318":null,"MONDO:0014457":null,"MONDO:0014780":null,"MONDO:0014832":null},"xrefs":{"Monarch":{"xref_id":"0017748"}}}


id: PBO:0004830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap123","termid":"PBO:0004830"}


id: MONDO:0010193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Weaver syndrome (WVS) is a rare, multisystem disorder characterized by tall stature, a typical facial appearance (hypertelorism, retrognathia) and variable intellectual disability. Additional features may include camptodactyly, soft doughy skin, umbilical hernia, and a low hoarse cry.","definition_xrefs":["Orphanet:3447"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weaver syndrome","secondary_identifiers":["ICD9:759.89","NANDO:2200957","GARD:7878","DOID:14731","MESH:C536687","MEDGEN:120511","NCIT:C125599","GTR:AN0102079","icd11.foundation:2042913723","NANDO:1200659","GTR:AN0102080","OMIM:277590","SCTID:63119004","NORD:1839","UMLS:C0265210"],"synonyms":[{"name":"EZH2 related overgrowth","type":"related"},{"name":"WEAVER syndrome","type":"related"},{"name":"WEAVER-like syndrome","type":"exact"},{"name":"WVS","type":"related"},{"name":"Weaver Smith syndrome","type":"related"},{"name":"Weaver Williams syndrome","type":"related"},{"name":"Weaver like syndrome","type":"related"},{"name":"Weaver syndrome","type":"exact"},{"name":"Weaver-Smith syndrome","type":"related"},{"name":"Weaver-like syndrome","type":"related"},{"name":"camptodactyly - overgrowth - unusual facies","type":"related"},{"name":"camptodactyly-overgrowth-unusual facies syndrome","type":"exact"},{"name":"intellectual disability, microcephaly, weight deficiency, unusual facies, clinodactyly, bone hypoplasia, and cleft palate","type":"related"},{"name":"mental retardation, microcephaly, weight deficiency, unusual facies, clinodactyly, bone hypoplasia, and cleft palate","type":"related"},{"name":"overgrowth syndrome with accelerated skeletal maturation, unusual facies, and camptodactyly","type":"related"}],"termid":"MONDO:0010193","xrefs":{"Monarch":{"xref_id":"0010193"}}}


id: PBO:0051894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 3","termid":"PBO:0051894"}


id: MONDO:0012014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive intermediate Charcot-Marie-Tooth disease type A is a subtype of autosomal recessive intermediate Charcot-Marie-Tooth (CMT) disease characterized by severe, early childhood-onset CMT neuropathy with prominent pes equinovarus deformity and impairment of hand muscles. Nerve conduction velocities usually range between 25-35 m/s and both axonal and demyelinating changes are observed on peripheral nerve pathology.","definition_xrefs":["Orphanet:217055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0017058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease recessive intermediate A","secondary_identifiers":["MESH:C564256","OMIM:608340","DOID:0110201","UMLS:C1842197","GARD:12453","MEDGEN:334012"],"synonyms":[{"name":"CMTRIA","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in GDAP1","type":"exact"},{"name":"Charcot-Marie-Tooth disease recessive intermediate type A","type":"exact"},{"name":"Charcot-Marie-Tooth disease, recessive Intermediate type a","type":"exact"},{"name":"Charcot-Marie-Tooth disease, recessive intermediate A","type":"related"},{"name":"Charcot-Marie-Tooth disease, recessive intermediate, A","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy recessive intermediate A","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, recessive Intermediate a","type":"related"},{"name":"GDAP1 Charcot-Marie-Tooth disease","type":"exact"},{"name":"RI-CMT type A","type":"exact"},{"name":"RI-CMTA","type":"exact"},{"name":"Ri-Cmta","type":"related"},{"name":"autosomal recessive intermediate Charcot-Marie-Tooth disease type A","type":"exact"}],"termid":"MONDO:0012014","xrefs":{"Monarch":{"xref_id":"0012014"}}}


id: MOD:00149
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a four-iron four-sulfur cluster to tetrakis-L-cysteinyl tetrairon tetrasulfide.","definition_xrefs":["PubMed:3351918","PubMed:7819196","PubMed:932007","RESID:AA0140","PubMed:7803404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tetrakis-L-cysteinyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); shared with dimeric partner","type":"exact"},{"name":"tetra-mu3-sulfido-tetrakis(cysteinato)-1kappaS,2kappaS,3kappaS,4kappaS-tetrahedro-tetrairon","type":"exact"},{"name":"tetra-mu3-sulfidotetrakis(S-cysteinyliron)","type":"exact"},{"name":"tetrakis-L-cysteinyl tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00149"}


id: GO:0005663
data:
  {"annotated_genes":["SJAG_02182","SJAG_00729","SJAG_04150","SJAG_00863","SJAG_00272","SJAG_01010"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89084,93462,112269,106447,111717,94767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043599"}]},"cv_name":"cellular_component","definition":"A complex that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase. In eukaryotes the complex consists of five polypeptides.","definition_xrefs":["PMID:14646196","PMID:14614842","PMID:16172520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"replication fork","termid":"GO:0005657"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"DNA replication factor C complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RFC complex","type":"exact"},{"name":"activator 1 complex","type":"exact"}],"termid":"GO:0005663","terms_by_termid":{"GO:0043599":null}}


id: MONDO:0009078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Jervell and Lange-Nielsen syndrome (obsolete MONDO:0009078)","synonyms":[{"name":"obsolete Jervell and Lange-Nielsen syndrome","type":"exact"}],"termid":"MONDO:0009078","xrefs":{"Monarch":{"xref_id":"0009078"}}}


id: PBO:0057470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 588","termid":"PBO:0057470"}


id: PBO:0113476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIb of cytochrome c oxidase; cytochrome c oxidase is also known as respiratory Complex IV and is the terminal member of the mitochondrial inner membrane electron transport chain; required for assembly and activity of cytochrome c oxidase; phosphorylated; easily released from the intermembrane space, suggesting a loose association with Complex IV","termid":"PBO:0113476"}


id: PATO:0002108
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's resembling small nipple like projection.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exserted","termid":"PATO:0000623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary","termid":"PATO:0002108"}


id: PBO:0054442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1839","termid":"PBO:0054442"}


id: MONDO:0013894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extremely rare primordial dwarfism characterized by short stature, onychodysplasia, facial dysmorphism and hypotrichosis, which is caused by biallelic mutations in the POC1A gene.","definition_xrefs":["PMID:26791357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-onychodysplasia-facial dysmorphism-hypotrichosis syndrome","secondary_identifiers":["Orphanet:314394","GARD:17419","OMIM:614813","MEDGEN:762199","UMLS:C3542022"],"synonyms":[{"name":"short stature, onychodysplasia, facial dysmorphism, and hypotrichosis","type":"related"},{"name":"soft","type":"related"},{"name":"soft syndrome","type":"exact"}],"termid":"MONDO:0013894","xrefs":{"Monarch":{"xref_id":"0013894"}}}


id: MONDO:1011714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocatalasia, non-human animal","secondary_identifiers":["OMIA:001138"],"termid":"MONDO:1011714","xrefs":{"Monarch":{"xref_id":"1011714"}}}


id: MONDO:0005787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the liver with species of mycobacterium, most often mycobacterium tuberculosis. It is characterized by localized small tuberculous miliary lesions or tumor-like mass (tuberculoma), and abnormalities in liver function tests.","definition_xrefs":["MESH:D014386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal tuberculosis","termid":"MONDO:0000369"},{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"},{"relation_name":"is_a","term_name":"gastrointestinal tuberculosis","termid":"MONDO:0005768"},{"relation_name":"is_a","term_name":"endocrine tuberculosis","termid":"MONDO:0006743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatic tuberculosis","secondary_identifiers":["DOID:407","EFO:0007302","MEDGEN:11944","UMLS:C0041313","ICD9:017.90","SCTID:186273003"],"synonyms":[{"name":"tuberculosis of liver","type":"exact"}],"termid":"MONDO:0005787","xrefs":{"Monarch":{"xref_id":"0005787"}}}


id: PBO:0078778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 3-2","termid":"PBO:0078778"}


id: GO:0061646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate secretion in response to membrane depolarization, where glutamate acts as a neurotransmitter.","definition_xrefs":["GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"},{"relation_name":"is_a","term_name":"positive regulation of glutamate secretion, neurotransmission","termid":"GO:1903296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glutamate neurotransmitter secretion in response to membrane depolarization","termid":"GO:0061646"}


id: MONDO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oligodendroglioma (obsolete MONDO:0002539)","termid":"MONDO:0002539","xrefs":{"Monarch":{"xref_id":"0002539"}}}


id: PBO:0030468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pantothenate_import","termid":"PBO:0030468"}


id: MOD:01080
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrylamidyl cysteinyl","synonyms":[{"name":"Acrylamidyl Cystenyl","type":"exact"}],"termid":"MOD:01080"}


id: PBO:0054661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2067","termid":"PBO:0054661"}


id: GO:0099630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during which neurotransmitter receptors in the postsynaptic specialization membrane are recycled via the endosome. This cycle includes release from anchoring (trapping), diffusion in the synaptic membrane to the postsynaptic endocytic region, endocytosis, transport to the endosome, recycling in the endosome, transport back the synaptic membrane and subsequent trapping in the postsynaptic specialization membrane.","definition_xrefs":["PMID:18832033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"neurotransmitter receptor cycle","termid":"GO:0099627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"postsynaptic neurotransmitter receptor cycle","termid":"GO:0099630"}


id: PBO:0048112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2","termid":"PBO:0048112"}


id: MONDO:0005100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic disorder, possibly autoimmune, marked by excessive production of collagen which results in hardening and thickening of body tissues. The two types of systemic scleroderma, limited cutaneous and diffuse cutaneous are classified with focus on the extent of affected skin. A relationship exists between the extent of skin area affected and degree of internal organ/system involvement. Systemic scleroderma can manifest itself in pulmonary fibrosis, Raynaud's syndrome, digestive system telangiectasias, renal hypertension and/or pulmonary hypertension.","definition_xrefs":["NCIT:C72070"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"excluded_subClassOf","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"scleroderma","termid":"MONDO:0019340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"systemic sclerosis","secondary_identifiers":["GARD:9748","MEDGEN:19897","ICD9:710.1","NANDO:1200277","icd11.foundation:1084365812","MedDRA:10042953","SCTID:89155008","NANDO:2200429","Orphanet:90291","MESH:D012595","EFO:0000717","UMLS:C0036421","NORD:2007","DOID:418"],"synonyms":[{"name":"PSS (progressive systemic sclerosis)","type":"exact"},{"name":"SSc","type":"exact"},{"name":"SSc, diffuse sclerosis","type":"exact"},{"name":"Scleroderma","type":"broad"},{"name":"Scleroderma (& [systemic sclerosis])","type":"exact"},{"name":"Scleroderma syndrome","type":"exact"},{"name":"Scleroderma, diffuse","type":"exact"},{"name":"Scleroderma, systemic","type":"exact"},{"name":"Systemic Scleroderma","type":"exact"},{"name":"diffuse Scleroderma","type":"exact"},{"name":"diffuse sclerosis","type":"exact"},{"name":"progressive systemic sclerosis","type":"exact"},{"name":"systemic Scleroderma","type":"exact"},{"name":"systemic scleroderma","type":"exact"},{"name":"systemic sclerosis","type":"exact"}],"termid":"MONDO:0005100","xrefs":{"Monarch":{"xref_id":"0005100"}}}


id: GO:0061516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a monocyte population by cell division.","definition_xrefs":["GOC:dph","PMID:18467591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte proliferation","termid":"GO:0061516"}


id: PBO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside mannosyltransferase","termid":"PBO:0000810"}


id: MONDO:0005848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"I would say the hematogenous widespread dissemination of tuberculosis in the body. The term derives from the chest X-ray image of the tiny (1-5 mm) tuberculosis lesions which are seen through out the lung parenchyma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miliary tuberculosis","secondary_identifiers":["UMLS:C0041321","ICD9:018.90","MEDGEN:21726","ICD9:018.80","MESH:D014391","SCTID:47604008","ICD10CM:A19","icd11.foundation:861638547","EFO:0007368","DOID:9861","ICD9:018","NCIT:C35086","ICD9:018.9"],"synonyms":[{"name":"acute miliary tuberculosis","type":"exact"},{"name":"disseminated tuberculosis","type":"exact"},{"name":"generalised tuberculosis","type":"exact"},{"name":"generalized tuberculosis","type":"exact"},{"name":"tuberculosis miliaris disseminata","type":"exact"}],"termid":"MONDO:0005848","xrefs":{"Monarch":{"xref_id":"0005848"}}}


id: PBO:0042994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 7","termid":"PBO:0042994"}


id: GO:1901888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell junction assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell junction assembly","termid":"GO:0034329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cell junction assembly","termid":"GO:1901888"}


id: PATO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which ends earlier than the natural end time or reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased occurrence","termid":"PATO:0002052"},{"relation_name":"is_a","term_name":"offset quality","termid":"PATO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrested","secondary_identifiers":["PATO:0001508"],"synonyms":[{"name":"abolished","type":"exact"},{"name":"incomplete","type":"related"}],"termid":"PATO:0000297"}


id: GO:0018795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-2-methyl-1,3-dicarbonate + H+ = CO2 + L-lactate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-2-methyl-1,3-dicarbonate decarboxylase activity (obsolete GO:0018795)","termid":"GO:0018795"}


id: PBO:0026977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_RNA_3'-end_processing","termid":"PBO:0026977"}


id: PBO:0089172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein repair carboxyl methyl esterase","termid":"PBO:0089172"}


id: FYPO:0001078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal polysaccharide level","termid":"FYPO:0001077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal beta-glucan level","synonyms":[{"name":"normal beta-D-glucan level","type":"exact"},{"name":"normal beta-glucan accumulation","type":"related"},{"name":"normal beta-glucan level during mitotic cell cycle","type":"related"},{"name":"normal beta-glucan level during vegetative growth","type":"exact"},{"name":"normal cellular beta-glucan level","type":"exact"}],"termid":"FYPO:0001078"}


id: GO:1900121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a protein or other molecule binding to a receptor.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor binding","synonyms":[{"name":"down regulation of receptor binding","type":"exact"},{"name":"down regulation of receptor-associated protein activity","type":"related"},{"name":"down-regulation of receptor binding","type":"exact"},{"name":"downregulation of receptor binding","type":"exact"},{"name":"inhibition of receptor binding","type":"narrow"},{"name":"inhibition of receptor ligand","type":"narrow"}],"termid":"GO:1900121"}


id: PBO:0060576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 12","termid":"PBO:0060576"}


id: PBO:0084115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase-like protein encoded within the telomeric Y' element","termid":"PBO:0084115"}


id: PBO:0041015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 2","termid":"PBO:0041015"}


id: PBO:0044172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin alpha 1 pseudogene 1","termid":"PBO:0044172"}


id: PBO:0050496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B6","termid":"PBO:0050496"}


id: GO:0097623
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111789],"is_not":false,"summary":null,"term":"GO:0097623"}]},"cv_name":"biological_process","definition":"The directed movement of potassium ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:vw","PMID:11932440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"potassium ion export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0071435","GO:0098668"],"synonyms":[{"name":"potassium export","type":"broad"},{"name":"potassium export across plasma membrane","type":"exact"},{"name":"potassium ion export","type":"broad"},{"name":"potassium ion export from cell","type":"exact"}],"termid":"GO:0097623","terms_by_termid":{"GO:0097623":null}}


id: PBO:0030270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_negative_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0030270"}


id: PBO:0044917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome chromosome region","termid":"PBO:0044917"}


id: GO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle).","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth","termid":"GO:0001545"}


id: PBO:0040357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 6","termid":"PBO:0040357"}


id: PATO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000483 tactile hyperresponsive (obsolete PATO:0000483)","termid":"PATO:0000483"}


id: PBO:0049726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 7","termid":"PBO:0049726"}


id: PBO:0080450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VSIG10L antisense RNA 1","termid":"PBO:0080450"}


id: GO:0009392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GlcNAc-1,6-anhMurNAc-L-Ala-gamma-D-Glu-DAP-D-Ala + H2O glcNAc-1,6-anhMurNAc + L-Ala-gamma-D-Glu-DAP-D-Ala.","definition_xrefs":["MetaCyc:RXN0-5225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"N-acetyl-anhydromuramoyl-L-alanine amidase activity","termid":"GO:0009392"}


id: MONDO:0016148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of collagen 6 (obsolete MONDO:0016148)","termid":"MONDO:0016148","xrefs":{"Monarch":{"xref_id":"0016148"}}}


id: PBO:0027384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_chromatin_bridge","termid":"PBO:0027384"}


id: PBO:0044984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHX35 divergent transcript","termid":"PBO:0044984"}


id: MONDO:1011331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metabolic disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic disease, non-human animal","termid":"MONDO:1011331","xrefs":{"Monarch":{"xref_id":"1011331"}}}


id: GO:0048363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the pectin component of mucilage.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin metabolic process","termid":"GO:0045488"},{"relation_name":"part_of","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"mucilage pectin metabolic process","synonyms":[{"name":"mucilage pectin metabolism","type":"exact"}],"termid":"GO:0048363"}


id: PBO:0041637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 D","termid":"PBO:0041637"}


id: GO:0102498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + maltose = 2 glucose.","definition_xrefs":["PMID:16343940","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete maltose glucosidase activity (obsolete GO:0102498)","termid":"GO:0102498"}


id: PBO:0018200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transmembrane transporter Amt1","termid":"PBO:0018200"}


id: GO:1902754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renal amino acid absorption.","definition_xrefs":["GO_REF:0000058","GOC:hjd","GOC:TermGenie","PMID:1526373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of renal amino acid absorption","termid":"GO:1902752"},{"relation_name":"positively_regulates","term_name":"renal amino acid absorption","termid":"GO:1990297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of renal amino acid absorption","synonyms":[{"name":"activation of renal amino acid absorption","type":"narrow"},{"name":"up regulation of renal amino acid absorption","type":"exact"},{"name":"up-regulation of renal amino acid absorption","type":"exact"},{"name":"upregulation of renal amino acid absorption","type":"exact"}],"termid":"GO:1902754"}


id: GO:2000681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of rubidium ion transport.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of rubidium ion transport (obsolete GO:2000681)","synonyms":[{"name":"negative regulation of Rb+ transport","type":"exact"},{"name":"negative regulation of rubidium cation transport","type":"exact"}],"termid":"GO:2000681"}


id: PBO:0089307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim17","termid":"PBO:0089307"}


id: MONDO:0012636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"restless legs syndrome, susceptibility to","termid":"MONDO:0100170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome, susceptibility to, 6","secondary_identifiers":["MEDGEN:370810","UMLS:C1970020","OMIM:611185"],"synonyms":[{"name":"RLS6","type":"exact"},{"name":"periodic limb movements in sleep","type":"related"},{"name":"restless legs syndrome 6","type":"exact"},{"name":"restless legs syndrome, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0012636","xrefs":{"Monarch":{"xref_id":"0012636"}}}


id: PBO:0077238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 3","termid":"PBO:0077238"}


id: PBO:0057200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 372","termid":"PBO:0057200"}


id: GO:0070059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to a stimulus indicating endoplasmic reticulum (ER) stress, and ends when the execution phase of apoptosis is triggered. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","PMID:18701708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","synonyms":[{"name":"ER stress-induced apoptosis","type":"exact"},{"name":"apoptosis in response to ER stress","type":"exact"},{"name":"apoptosis in response to endoplasmic reticulum stress","type":"broad"},{"name":"apoptosis triggered by ER stress","type":"exact"},{"name":"endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0070059"}


id: PATO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality that exists through a liquid cover on the surface of the bearer.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coating","termid":"PATO:0002012"}


id: MONDO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tularemia that involves the lymph node.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymph node disorder","termid":"MONDO:0004928"},{"relation_name":"is_a","term_name":"tularemia","termid":"MONDO:0018077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"glandular tularemia","secondary_identifiers":["SCTID:21857006","UMLS:C0275974","MEDGEN:546997","DOID:0050382"],"synonyms":[{"name":"lymph node tularemia","type":"exact"}],"termid":"MONDO:0000320","xrefs":{"Monarch":{"xref_id":"0000320"}}}


id: PBO:0040343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MF-PTCD1 readthrough","termid":"PBO:0040343"}


id: GO:0046369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactose, the aldohexose galacto-hexose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose metabolic process","termid":"GO:0006012"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"galactose biosynthetic process","synonyms":[{"name":"galactose anabolism","type":"exact"},{"name":"galactose biosynthesis","type":"exact"},{"name":"galactose formation","type":"exact"},{"name":"galactose synthesis","type":"exact"}],"termid":"GO:0046369"}


id: GO:0086014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in an atrial cardiac muscle cell.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell to AV node cell signaling","termid":"GO:0086026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}


id: MONDO:0001058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastric fundus cancer (obsolete MONDO:0001058)","termid":"MONDO:0001058","xrefs":{"Monarch":{"xref_id":"0001058"}}}


id: PBO:0078265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 2-3","termid":"PBO:0078265"}


id: PBO:0081156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, FOG family member 1","termid":"PBO:0081156"}


id: PBO:0073319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 2","termid":"PBO:0073319"}


id: GO:1900804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of brevianamide F.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete brevianamide F catabolic process (obsolete GO:1900804)","synonyms":[{"name":"L-prolyl-L-tryptophan anhydride breakdown","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride catabolic process","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride catabolism","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride degradation","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride breakdown","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride catabolic process","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride catabolism","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride degradation","type":"related"},{"name":"brevianamide F breakdown","type":"exact"},{"name":"brevianamide F catabolism","type":"exact"},{"name":"brevianamide F degradation","type":"exact"},{"name":"cyclo-(Trp-Pro) breakdown","type":"related"},{"name":"cyclo-(Trp-Pro) catabolic process","type":"related"},{"name":"cyclo-(Trp-Pro) catabolism","type":"related"},{"name":"cyclo-(Trp-Pro) degradation","type":"related"},{"name":"cyclo-L-Trp-L-Pro breakdown","type":"related"},{"name":"cyclo-L-Trp-L-Pro catabolic process","type":"related"},{"name":"cyclo-L-Trp-L-Pro catabolism","type":"related"},{"name":"cyclo-L-Trp-L-Pro degradation","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline breakdown","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline catabolic process","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline catabolism","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline degradation","type":"related"},{"name":"tryptophan-proline diketopiperazine breakdown","type":"related"},{"name":"tryptophan-proline diketopiperazine catabolic process","type":"related"},{"name":"tryptophan-proline diketopiperazine catabolism","type":"related"},{"name":"tryptophan-proline diketopiperazine degradation","type":"related"}],"termid":"GO:1900804"}


id: PBO:0027597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0027597"}


id: GO:0052775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R1-L-rhamnose-(1->3)-alpha-L-rhamnose-R2 + H2O = R1-L-rhamnose + L-rhamnose-R2. This reaction is the hydrolysis of an alpha-(1->3) linkage between two rhamnose residues in a polysaccharide chain.","definition_xrefs":["GOC:mengo_curators","PMID:10439404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"endo-1,3-alpha-L-rhamnosidase activity","synonyms":[{"name":"endo-(1,3)-alpha-L-rhamnosidase activity","type":"exact"},{"name":"endo-(1->3)-alpha-L-rhamnosidase activity","type":"exact"},{"name":"endorhamnosidase activity","type":"broad"}],"termid":"GO:0052775"}


id: MONDO:1010281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Testicular regression syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"hypogonadism, non-human animal","termid":"MONDO:1010276"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular regression syndrome, non-human animal","secondary_identifiers":["OMIA:001535"],"termid":"MONDO:1010281","xrefs":{"Monarch":{"xref_id":"1010281"}}}


id: GO:0009706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the chloroplast envelope; also faces the chloroplast stroma.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid inner membrane","termid":"GO:0009528"},{"relation_name":"is_a","term_name":"chloroplast membrane","termid":"GO:0031969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast inner membrane","synonyms":[{"name":"chloroplast inner envelope","type":"exact"}],"termid":"GO:0009706"}


id: GO:0009192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate catabolic process","termid":"GO:0009134"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyribonucleoside diphosphate catabolic process","synonyms":[{"name":"deoxyribonucleoside diphosphate breakdown","type":"exact"},{"name":"deoxyribonucleoside diphosphate catabolism","type":"exact"},{"name":"deoxyribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009192"}


id: PBO:0029365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_tRNA_level","termid":"PBO:0029365"}


id: GO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of general metabolic decline that arises in dividing cells as they age, and alters cellular metabolism to cause a decline in cell function.","definition_xrefs":["GOC:jh","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent general metabolic decline involved in replicative cell aging (obsolete GO:0001321)","synonyms":[{"name":"age-dependent general metabolic decline during replicative cell ageing","type":"related"},{"name":"age-dependent general metabolic decline involved in replicative cell aging","type":"related"}],"termid":"GO:0001321"}


id: PBO:0048067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 16","termid":"PBO:0048067"}


id: GO:0004845
data:
  {"annotated_genes":["SJAG_04709","SJAG_04713","SJAG_04354","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86984,87968,91479,114362],"is_not":false,"summary":null,"term":"GO:0004845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + UMP = 5-phospho-alpha-D-ribose 1-diphosphate + uracil.","definition_xrefs":["EC:2.4.2.9","RHEA:13017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"uracil phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00966","MetaCyc:URACIL-PRIBOSYLTRANS-RXN"],"synonyms":[{"name":"UMP diphosphorylase activity","type":"related"},{"name":"UMP pyrophosphorylase activity","type":"related"},{"name":"UMP:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"UMP:pyrophosphate phosphoribosyltransferase activity","type":"related"},{"name":"UPRTase activity","type":"related"},{"name":"uridine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"uridine monophosphate pyrophosphorylase activity","type":"related"},{"name":"uridylate pyrophosphorylase activity","type":"related"},{"name":"uridylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0004845","terms_by_termid":{"GO:0004845":null}}


id: MONDO:0007219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brachymesophalangy with mesomelic short limbs, and carpal and tarsal bone abnormalities. In general, the affected individuals are of slightly short stature and normal intelligence. The syndrome has been described in a kindred with seven affected members from three generations. Transmission appears to be autosomal dominant.","definition_xrefs":["Orphanet:93382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromesomelic dysplasia","termid":"MONDO:0019696"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Osebold-Remondini syndrome","secondary_identifiers":["MEDGEN:350598","DOID:0110968","SCTID:715722003","GARD:983","MESH:C537092","OMIM:112910","UMLS:C1862130"],"synonyms":[{"name":"BDA6","type":"exact"},{"name":"Brachymesophalangy with mesomelic short limbs and carpal and tarsal osseous abnormalities","type":"related"},{"name":"OSEBOLD-Remondini syndrome","type":"related"},{"name":"Osebold-Remondini syndrome","type":"exact"},{"name":"brachydactyly type A6","type":"exact"},{"name":"brachydactyly, type A6","type":"exact"},{"name":"brachymesophalangy with mesomelic short limbs and carpal and tarsal osseous abnormalities","type":"exact"}],"termid":"MONDO:0007219","xrefs":{"Monarch":{"xref_id":"0007219"}}}


id: PBO:0080187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D receptor","termid":"PBO:0080187"}


id: PBO:0069353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 613, pseudogene","termid":"PBO:0069353"}


id: PBO:0005883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine, mitochondrial","termid":"PBO:0005883"}


id: FYPO:0004510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the meiotic spindle is abnormal during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle assembly","termid":"FYPO:0000737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal spindle assembly during meiosis II","synonyms":[{"name":"abnormal meiosis II spindle assembly","type":"exact"},{"name":"abnormal meiosis II spindle formation","type":"exact"},{"name":"abnormal meiotic spindle assembly during meiosis II","type":"exact"},{"name":"abnormal spindle assembly at meiosis II","type":"exact"},{"name":"abnormal spindle assembly during second meiotic nuclear division","type":"exact"},{"name":"abnormal spindle assembly involved in meiosis II","type":"exact"}],"termid":"FYPO:0004510"}


id: PBO:0074760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 119","termid":"PBO:0074760"}


id: PBO:0072719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoid X receptor beta","termid":"PBO:0072719"}


id: GO:1900776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving fumiquinazoline A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline A metabolic process (obsolete GO:1900776)","synonyms":[{"name":"fumiquinazoline A metabolism","type":"exact"}],"termid":"GO:1900776"}


id: SO:0000691
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The initiator methionine that has been cleaved from a mature polypeptide sequence.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"cleaved_initiator_methionine","secondary_identifiers":["BS:00067"],"synonyms":[{"name":"cleaved initiator methionine","type":"exact"},{"name":"init_met","type":"related"},{"name":"initiator methionine","type":"related"}],"termid":"SO:0000691"}


id: PBO:0039649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1G2 antisense RNA 1","termid":"PBO:0039649"}


id: GO:0034079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of butanediol; the biologically relevant isomer is 2,3-butanediol, CH3CH(OH)CH(OH)CH3.","definition_xrefs":["MetaCyc:P125-PWY","GOC:mah","ISBN:0911910123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanediol metabolic process","termid":"GO:0034077"},{"relation_name":"is_a","term_name":"glycol biosynthetic process","termid":"GO:0042845"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butanediol biosynthetic process","synonyms":[{"name":"butanediol anabolism","type":"exact"},{"name":"butanediol biosynthesis","type":"exact"},{"name":"butanediol formation","type":"exact"},{"name":"butanediol synthesis","type":"exact"},{"name":"butylene glycol biosynthesis","type":"exact"},{"name":"butylene glycol biosynthetic process","type":"exact"}],"termid":"GO:0034079"}


id: PBO:0056538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylmalonyl-CoA epimerase","termid":"PBO:0056538"}


id: MONDO:0001292
data:
  {"annotated_genes":["SJAG_03163","SJAG_00260","SJAG_02398","SJAG_03920","SJAG_01671","SJAG_01895"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[86549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[86459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[85371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[86695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"}]},"cv_name":"mondo","definition":"A disease involving the autonomic nervous system.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autonomic neuropathy","termid":"MONDO:0001300"},{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03163":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"autonomic nervous system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D001342","MEDGEN:218837","ICD9:337.9","DOID:11465","UMLS:C1145628","ICD9:337.1","SCTID:128123007","EFO:0009532","SCTID:15241006"],"synonyms":[{"name":"ANS (autonomic nervous system) diseases","type":"related"},{"name":"ANS disease","type":"related"},{"name":"ANS diseases","type":"related"},{"name":"autonomic central nervous system diseases","type":"related"},{"name":"autonomic disease","type":"related"},{"name":"autonomic diseases","type":"related"},{"name":"autonomic dysfunction, segmental","type":"related"},{"name":"autonomic dysfunctions, segmental","type":"related"},{"name":"autonomic nervous disease","type":"exact"},{"name":"autonomic nervous system disease","type":"exact"},{"name":"autonomic nervous system disease or disorder","type":"exact"},{"name":"autonomic nervous system disorder","type":"exact"},{"name":"autonomic nervous system disorders","type":"related"},{"name":"autonomic peripheral nervous system diseases","type":"narrow"},{"name":"central autonomic nervous system diseases","type":"related"},{"name":"disease of autonomic nervous system","type":"exact"},{"name":"disease or disorder of autonomic nervous system","type":"exact"},{"name":"disorder of autonomic nervous system","type":"exact"},{"name":"disorder of peripheral autonomic nervous system","type":"exact"},{"name":"disorder of the autonomic nervous system","type":"exact"},{"name":"disorders of the autonomic nervous system","type":"related"},{"name":"dysautonomia","type":"narrow"},{"name":"nervous system diseases, autonomic","type":"related"},{"name":"nervous system diseases, sympathetic","type":"related"},{"name":"peripheral autonomic nervous system diseases","type":"narrow"},{"name":"segmental autonomic dysfunction","type":"related"},{"name":"segmental autonomic dysfunctions","type":"related"}],"termid":"MONDO:0001292","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null,"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0001292"}}}


id: MONDO:0020108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune hemolytic anemia (AIHA) is an autoimmune disorder in which various types of auto-antibodies are directed against red blood cells causing their survival to be shortened and resulting in hemolytic anemia.","definition_xrefs":["Orphanet:98375"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare acquired hemolytic anemia (obsolete MONDO:0015911)","termid":"MONDO:0015911"},{"relation_name":"is_a","term_name":"autoimmune disorder of blood","termid":"MONDO:0000602"},{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"autoimmune hemolytic anemia","secondary_identifiers":["NANDO:1200305","MEDGEN:1918","CSP:0427-1178","SCTID:413603009","DOID:718","MESH:D000744","icd11.foundation:1834341306","ICD9:283.0","OMIM:205700","UMLS:C0002880","NANDO:2100181","NORD:774","EFO:1001264","NCIT:C34378","GARD:5870","MedDRA:10002046"],"synonyms":[{"name":"AHA","type":"exact"},{"name":"AIHA","type":"exact"},{"name":"Anemia, Hemolytic, Acquired Autoimmune","type":"exact"},{"name":"acquired autoimmune hemolytic anaemia","type":"related"},{"name":"acquired autoimmune hemolytic anemia","type":"related"},{"name":"anaemia hemolytic autoimmune","type":"related"},{"name":"anemia hemolytic autoimmune","type":"related"},{"name":"anemia, autoimmune hemolytic","type":"related"},{"name":"autoimmune haemolytic anaemia","type":"exact"},{"name":"autoimmune haemolytic anemia","type":"exact"},{"name":"autoimmune hemolytic anemia","type":"exact"},{"name":"familial auto-immune hemolytic anaemia (subtype)","type":"related"},{"name":"familial auto-immune hemolytic anemia (subtype)","type":"related"},{"name":"idiopathic autoimmune hemolytic anaemia","type":"related"},{"name":"idiopathic autoimmune hemolytic anemia","type":"related"},{"name":"immuno-hemolytic anaemia","type":"related"},{"name":"immuno-hemolytic anemia","type":"related"}],"termid":"MONDO:0020108","xrefs":{"Monarch":{"xref_id":"0020108"}}}


id: GO:0007577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This process is a type of programmed cell death pathway similar to apoptosis and necrosis observed in multicellular organisms. It is characterized by cellular enlargement (necrosis) and presence of many autophagic bodies along with degradation of cellular components (nucleus, Golgi, ER), protein, DNA and RNA.","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete autophagic death (sensu Saccharomyces) (obsolete GO:0007577)","synonyms":[{"name":"autophagic death (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007577"}


id: MONDO:0013673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wolfram-like syndrome is a rare endocrine disease characterized by the triad of adult-onset diabetes mellitus, progressive hearing loss (usually presenting in the first decade of life and principally of low to moderate frequencies), and/or juvenile-onset optic atrophy. Psychiatric (i.e. anxiety, depression, hallucinations) and sleep disorders, the only neurologic abnormalities observed in this disease, have been reported in rare cases. Unlike Wolfram syndrome, patients with Wolfram-like syndrome do not report endocrine or cardiac findings.","definition_xrefs":["Orphanet:411590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolfram-like syndrome","secondary_identifiers":["OMIM:614296","GARD:17683","SCTID:734022008","MEDGEN:481988","UMLS:C3280358","DOID:0080584","MESH:C565631"],"synonyms":[{"name":"WFSL","type":"related"},{"name":"Wolfram-like syndrome","type":"exact"},{"name":"Wolfram-like syndrome, autosomal dominant","type":"related"},{"name":"hearing loss, progressive, with optic atrophy and/or impaired glucose Regulation","type":"related"}],"termid":"MONDO:0013673","xrefs":{"Monarch":{"xref_id":"0013673"}}}


id: PBO:0036460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase, human carnosine N-methyltransferase ortholog","termid":"PBO:0036460"}


id: PBO:0060223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix remodeling associated 5","termid":"PBO:0060223"}


id: GO:0061902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of 1-phosphatidylinositol-3-kinase activity.","definition_xrefs":["PMID:18723082","GOC:bc","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of 1-phosphatidylinositol-3-kinase activity (obsolete GO:0061902)","termid":"GO:0061902"}


id: MONDO:1010611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyroiditis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroiditis, non-human animal","termid":"MONDO:1010059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroiditis, dog","secondary_identifiers":["OMIA:001005-9615"],"termid":"MONDO:1010611","xrefs":{"Monarch":{"xref_id":"1010611"}}}


id: GO:0015830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of diaminopimelate, the anion of 2,6-diaminoheptanedioic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"fatty acid derivative transport","termid":"GO:1901571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"diaminopimelate transport","termid":"GO:0015830"}


id: PBO:0075040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-3","termid":"PBO:0075040"}


id: PBO:0051369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-15","termid":"PBO:0051369"}


id: PBO:0070208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 136 pseudogene","termid":"PBO:0070208"}


id: GO:0004552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-octanol + NAD+ = 1-octanal + H+ + NADH.","definition_xrefs":["EC:1.1.1.73","RHEA:24620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"octanol dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:OCTANOL-DEHYDROGENASE-RXN","KEGG_REACTION:R02878"],"synonyms":[{"name":"1-octanol dehydrogenase activity","type":"related"},{"name":"octanol dehydrogenase activity","type":"broad"},{"name":"octanol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0004552"}


id: GO:1901502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ether.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ether catabolic process","synonyms":[{"name":"ether breakdown","type":"exact"},{"name":"ether catabolism","type":"exact"},{"name":"ether degradation","type":"exact"}],"termid":"GO:1901502"}


id: MONDO:0000097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid dyshormonogenesis (obsolete MONDO:0000097)","termid":"MONDO:0000097","xrefs":{"Monarch":{"xref_id":"0000097"}}}


id: PBO:0054762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2174","termid":"PBO:0054762"}


id: PBO:0078326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta variable 1","termid":"PBO:0078326"}


id: GO:0086005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a ventricular cardiac muscle cell.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}


id: MONDO:0030869
data:
  {"annotated_genes":["SJAG_02339"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85243],"is_not":false,"summary":null,"term":"MONDO:0030869"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failures 50","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436888","DOID:0112272","OMIM:619145","MEDGEN:1747507"],"synonyms":[{"name":"SPGF50","type":"exact"},{"name":"spermatogenic failure","type":"broad"},{"name":"spermatogenic failures 50","type":"exact"}],"termid":"MONDO:0030869","terms_by_termid":{"MONDO:0030869":null},"xrefs":{"Monarch":{"xref_id":"0030869"}}}


id: PBO:0038310
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_first_sent_to_curator_date","termid":"PBO:0038310"}


id: MONDO:0010919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"varicella, severe recurrent","secondary_identifiers":["MESH:C563458","UMLS:C1833487","MEDGEN:322202","OMIM:600670"],"synonyms":[{"name":"varicella, severe recurrent","type":"exact"}],"termid":"MONDO:0010919","xrefs":{"Monarch":{"xref_id":"0010919"}}}


id: PBO:0089974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid protease","termid":"PBO:0089974"}


id: GO:0047750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-alpha-cholest-7-en-3-beta-ol = 5-alpha-cholest-8-en-3-beta-ol.","definition_xrefs":["RHEA:15281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"cholestenol delta-isomerase activity","secondary_identifiers":["EC:5.3.3.5","MetaCyc:RXN66-25"],"synonyms":[{"name":"cholestenol D-isomerase activity","type":"exact"},{"name":"delta7-cholestenol delta7-delta8-isomerase activity","type":"related"}],"termid":"GO:0047750"}


id: PBO:0072562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS related 2","termid":"PBO:0072562"}


id: PBO:0031135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_osmotic_stress","termid":"PBO:0031135"}


id: PBO:0042153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 15","termid":"PBO:0042153"}


id: MONDO:0000877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cryptococcal meningitis (obsolete MONDO:0000877)","termid":"MONDO:0000877","xrefs":{"Monarch":{"xref_id":"0000877"}}}


id: PBO:0045065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 4","termid":"PBO:0045065"}


id: MONDO:0003731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature or immature teratoma affecting the central nervous system and occurring in adults.","definition_xrefs":["NCIT:C5794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system teratoma","termid":"MONDO:0002718"},{"relation_name":"is_a","term_name":"adult central nervous system germ cell tumor","termid":"MONDO:0003405"},{"relation_name":"is_a","term_name":"adult teratoma","termid":"MONDO:0003516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult central nervous system teratoma","secondary_identifiers":["DOID:6015","MEDGEN:234583","UMLS:C1370506"],"synonyms":[{"name":"Central nervous system teratoma","type":"exact"},{"name":"adult CNS teratoma","type":"exact"},{"name":"adult central nervous system teratoma","type":"exact"},{"name":"central nervous system teratoma of adults","type":"exact"},{"name":"teratoma of adult CNS","type":"exact"},{"name":"teratoma of adult central nervous system","type":"exact"},{"name":"teratoma of the adult CNS","type":"exact"},{"name":"teratoma of the adult central nervous system","type":"exact"}],"termid":"MONDO:0003731","xrefs":{"Monarch":{"xref_id":"0003731"}}}


id: GO:1904147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonylphenol stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:19260726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nonylphenol","termid":"GO:1904147"}


id: PBO:0088064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-ribosomal 60S subunit protein L40A fusion protein; cleaved to yield ubiquitin and ribosomal protein L40A; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40A has a paralog, RPL40B, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0088064"}


id: RO:0002470
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eats","termid":"RO:0002470"}


id: PBO:0087362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific activator of Chs3p (chitin synthase III); required for the synthesis of the chitosan layer of ascospores; transcriptionally induced at alkaline pH; SHC1 has a paralog, SKT5, that arose from the whole genome duplication","termid":"PBO:0087362"}


id: MONDO:0008691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc, elevated plasma","secondary_identifiers":["MEDGEN:349756","OMIM:194470","UMLS:C1860228"],"synonyms":[{"name":"albumin binding of zinc, elevated","type":"related"},{"name":"hyperzincemia and hypercalprotectinemia","type":"related"},{"name":"hyperzincemia, familial Dysalbuminemic","type":"related"},{"name":"zinc, elevated plasma","type":"exact"}],"termid":"MONDO:0008691","xrefs":{"Monarch":{"xref_id":"0008691"}}}


id: MONDO:0019181
data:
  {"annotated_genes":["SJAG_02878","SJAG_02422","SJAG_04022","SJAG_01412","SJAG_05326","SJAG_03909","SJAG_01269","SJAG_04616","SJAG_03471","SJAG_00786","SJAG_01047","SJAG_00845","SJAG_02238"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010659"},{"annotations":[85438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026723"},{"annotations":[85558,85559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958200"},{"annotations":[84842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010497"},{"annotations":[85454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0049222"},{"annotations":[86433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010447"},{"annotations":[86572,86573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010361"},{"annotations":[86418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010451"},{"annotations":[85733,85732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010313"},{"annotations":[84575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010660"}]},"cv_name":"mondo","definition":"Nonspecific X-linked intellectual deficiencies (MRX) belong to the family of sex-linked intellectual deficiencies (XLMR). In contrast to syndromic or specific X-linked intellectual deficiencies (MRXS), which also present with associated physical, neurological and/or psychiatric manifestations, intellectual deficiency is the only symptom of MRX.","definition_xrefs":["Orphanet:777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic intellectual disability","termid":"MONDO:0000509"},{"relation_name":"is_a","term_name":"X-linked intellectual disability","termid":"MONDO:0100284"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00786":null,"SJAG_00845":null,"SJAG_01047":null,"SJAG_01269":null,"SJAG_01412":null,"SJAG_02238":null,"SJAG_02422":null,"SJAG_02878":null,"SJAG_03471":null,"SJAG_03909":null,"SJAG_04022":null,"SJAG_04616":null,"SJAG_05326":null},"genotype_count":0,"is_obsolete":false,"name":"non-syndromic X-linked intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050776","GARD:18640","MEDGEN:502019","OMIMPS:309530","UMLS:C3501611","MESH:C564490"],"synonyms":[{"name":"X-linked non-specific intellectual disability","type":"exact"},{"name":"X-linked non-syndromic intellectual disability","type":"exact"},{"name":"intellectual disability, X-linked, nonsyndromic","type":"exact"},{"name":"intellectual disability, nonsyndromic, X-linked","type":"exact"},{"name":"isolated X-linked intellectual disability","type":"related"},{"name":"mental retardation, X-linked, nonsyndromic","type":"exact"},{"name":"mental retardation, nonsyndromic, X-linked","type":"exact"},{"name":"non-specific X-linked intellectual disability","type":"exact"},{"name":"non-specific X-linked mental retardation","type":"exact"},{"name":"non-syndromic X-linked intellectual disability","type":"exact"},{"name":"non-syndromic intellectual disability, X-linked","type":"exact"},{"name":"nonsyndromic X-linked intellectual disability","type":"exact"}],"termid":"MONDO:0019181","terms_by_termid":{"MONDO:0010313":null,"MONDO:0010361":null,"MONDO:0010447":null,"MONDO:0010451":null,"MONDO:0010497":null,"MONDO:0010659":null,"MONDO:0010660":null,"MONDO:0026723":null,"MONDO:0049222":null,"MONDO:0958200":null},"xrefs":{"Monarch":{"xref_id":"0019181"}}}


id: FYPO:0001336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell process phenotype that affects a transport process in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"transport phenotype during vegetative growth","synonyms":[{"name":"fission yeast transport phenotype during vegetative growth","type":"exact"},{"name":"transport phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001336"}


id: PBO:0063259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 5","termid":"PBO:0063259"}


id: FYPO:0006445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation of one or more proteins involved in amino acid biosynthesis is decreased.","definition_xrefs":["PomBase:mah","PMID:29432178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased translation of amino acid biosynthesis proteins during vegetative growth","synonyms":[{"name":"decreased translation of amino acid biosynthesis genes during vegetative growth","type":"exact"},{"name":"decreased translation of amino acid biosynthesis mRNAs during vegetative growth","type":"exact"},{"name":"decreased translation of amino acid biosynthesis proteins during mitotic cell cycle","type":"related"},{"name":"reduced translation of amino acid biosynthesis proteins during vegetative growth","type":"exact"}],"termid":"FYPO:0006445"}


id: FYPO:0005148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is increased. The nuclear periphery is the portion of the nuclear lumen proximal to the inner nuclear membrane.","definition_xrefs":["PomBase:mah","GO:0034399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to nuclear periphery","synonyms":[{"name":"increased protein localisation to nuclear periphery","type":"exact"},{"name":"increased protein localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0005148"}


id: GO:0000992
data:
  {"annotated_genes":["SJAG_03120","SJAG_00421","SJAG_03354","SJAG_05339"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87703,99081],"is_not":false,"summary":null,"term":"GO:0000992"},{"annotations":[99083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[99084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[102557,95087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase III. The transcribed region might be contain a single gene or a cistron containing multiple genes.","definition_xrefs":["PMID:12381659","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-regulatory region sequence-specific DNA binding","termid":"GO:0000987"},{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulatory region sequence-specific DNA binding","termid":"GO:0001016"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_03120":null,"SJAG_03354":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0000976","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000992","terms_by_termid":{"GO:0000992":null,"GO:0001002":null,"GO:0001003":null,"GO:0001006":null}}


id: MONDO:0014102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the SPRY4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 17 with or without anosmia","secondary_identifiers":["MEDGEN:815301","OMIM:615266","DOID:0090079","GARD:15928","UMLS:C3808971","ICD10CM:E23.0"],"synonyms":[{"name":"HH17","type":"related"},{"name":"SPRY4 hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 17 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in SPRY4","type":"exact"}],"termid":"MONDO:0014102","xrefs":{"Monarch":{"xref_id":"0014102"}}}


id: GO:1905904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesoderm formation.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","PMID:23939491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesoderm formation","termid":"GO:1905902"},{"relation_name":"is_a","term_name":"positive regulation of mesoderm development","termid":"GO:2000382"},{"relation_name":"positively_regulates","term_name":"mesoderm formation","termid":"GO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesoderm formation","synonyms":[{"name":"activation of mesoderm formation","type":"narrow"},{"name":"up regulation of mesoderm formation","type":"exact"},{"name":"up-regulation of mesoderm formation","type":"exact"},{"name":"upregulation of mesoderm formation","type":"exact"}],"termid":"GO:1905904"}


id: GO:0048934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"}


id: PBO:0066014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor activity modifying protein 1","termid":"PBO:0066014"}


id: MONDO:0011643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete permanent neonatal diabetes mellitus (obsolete MONDO:0011643)","termid":"MONDO:0011643","xrefs":{"Monarch":{"xref_id":"0011643"}}}


id: MONDO:0958012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0002039"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 9","secondary_identifiers":["MEDGEN:1845761","OMIM:620669","UMLS:C5882740"],"termid":"MONDO:0958012","xrefs":{"Monarch":{"xref_id":"0958012"}}}


id: PBO:0063102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) glycohydrolase","termid":"PBO:0063102"}


id: PBO:0047307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas cell surface death receptor","termid":"PBO:0047307"}


id: GO:0048689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a growth cone in an injured axon.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of growth cone in injured axon","termid":"GO:0048689"}


id: MONDO:1012863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative brain disorder with mitochondrial dysfunction, amyloid-β accumulation, and lethal epilepsy that occurs in dogs due to a mutation in the PITRM1 gene.","definition_xrefs":["PMID:33835239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, dog","termid":"MONDO:1010411"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, mitochondrial dysfunction and neurodegeneration, PITRM1-related, dog","secondary_identifiers":["OMIA:002324-9615"],"termid":"MONDO:1012863","xrefs":{"Monarch":{"xref_id":"1012863"}}}


id: MONDO:0017620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital sucrase-isomaltase deficiency","termid":"MONDO:0009114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"congenital sucrase-isomaltase deficiency without starch intolerance","secondary_identifiers":["Orphanet:306462"],"synonyms":[{"name":"CSID without starch intolerance","type":"exact"},{"name":"congenital sucrase-isomaltose malabsorption without starch intolerance","type":"exact"},{"name":"congenital sucrose intolerance without starch intolerance","type":"exact"},{"name":"disaccharide intolerance without starch intolerance","type":"exact"}],"termid":"MONDO:0017620","xrefs":{"Monarch":{"xref_id":"0017620"}}}


id: PBO:0075922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 14","termid":"PBO:0075922"}


id: PBO:0017036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug98","termid":"PBO:0017036"}


id: PBO:0090814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor Mti3","termid":"PBO:0090814"}


id: PBO:0010006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galacose specific flocculin Gsf2","termid":"PBO:0010006"}


id: GO:0090606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which microorganisms produce an extracellular matrix and form multicellular aggregates at an air-liquid interface.","definition_xrefs":["GOC:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species biofilm formation","termid":"GO:0044010"},{"relation_name":"is_a","term_name":"surface biofilm formation","termid":"GO:0090604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species surface biofilm formation","secondary_identifiers":["GO:0032022"],"synonyms":[{"name":"multicellular pellicle formation","type":"related"}],"termid":"GO:0090606"}


id: PBO:0012598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alditol NADP+ 1-oxidoreductase activity (predicted)","termid":"PBO:0012598"}


id: MONDO:1011463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, sheep","secondary_identifiers":["OMIA:000033-9940"],"termid":"MONDO:1011463","xrefs":{"Monarch":{"xref_id":"1011463"}}}


id: MONDO:0016047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process affecting the internal structures of the eye.","definition_xrefs":["NCIT:C34586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"endophthalmitis","secondary_identifiers":["Orphanet:199323","ICD9:360.19","SCTID:1847009","DOID:4692","MEDGEN:8633","icd11.foundation:1211141166","MESH:D009877","UMLS:C0014236","MedDRA:10014801","GARD:20333"],"termid":"MONDO:0016047","xrefs":{"Monarch":{"xref_id":"0016047"}}}


id: GO:0047851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + an omega-dicarboxylic acid + CoASH= AMP + diphosphate + an omega-carboxyacyl-CoA.","definition_xrefs":["MetaCyc:DICARBOXYLATE--COA-LIGASE-RXN","EC:6.2.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dicarboxylate-CoA ligase activity","secondary_identifiers":["RHEA:14289"],"synonyms":[{"name":"carboxylyl-CoA synthetase activity","type":"related"},{"name":"omega-dicarboxylate:CoA ligase (AMP-forming)","type":"related"}],"termid":"GO:0047851"}


id: MONDO:0000759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrorenal syndrome (obsolete MONDO:0000759)","termid":"MONDO:0000759","xrefs":{"Monarch":{"xref_id":"0000759"}}}


id: GO:1903811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-asparagine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:23895341","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine transport","termid":"GO:0006867"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"asparagine transmembrane transport","termid":"GO:1903713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-asparagine import across plasma membrane","secondary_identifiers":["GO:0090469"],"synonyms":[{"name":"L-asparagine import into cell","type":"exact"},{"name":"asparagine import","type":"broad"}],"termid":"GO:1903811"}


id: MONDO:0012730
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84588],"is_not":false,"summary":null,"term":"MONDO:0012730"}]},"cv_name":"mondo","definition":"Any familial thoracic aortic aneurysm and aortic dissection in which the cause of the disease is a mutation in the ACTA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15527","MESH:C567085","OMIM:611788","MEDGEN:435866","UMLS:C2673186"],"synonyms":[{"name":"AAT6","type":"related"},{"name":"ACTA2 familial thoracic aortic aneurysm and aortic dissection","type":"exact"},{"name":"aortic aneurysm, familial thoracic 6","type":"exact"},{"name":"aortic aneurysm, familial thoracic type 6","type":"exact"},{"name":"familial thoracic aortic aneurysm and aortic dissection caused by mutation in ACTA2","type":"exact"},{"name":"familial thoracic aortic aneurysm with livedo reticularis and iris flocculi","type":"related"}],"termid":"MONDO:0012730","terms_by_termid":{"MONDO:0012730":null},"xrefs":{"Monarch":{"xref_id":"0012730"}}}


id: GO:0120046
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to a medial cortical node.","definition_xrefs":["PMID:19474789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to medial cortex","termid":"GO:0106011"},{"relation_name":"regulates","term_name":"protein localization to medial cortical node","termid":"GO:1902577"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120046","terms_by_termid":{"GO:0120047":null}}


id: GO:0070352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fat cell proliferation","termid":"GO:0070346"},{"relation_name":"is_a","term_name":"regulation of white fat cell proliferation","termid":"GO:0070350"},{"relation_name":"positively_regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of white fat cell proliferation","synonyms":[{"name":"activation of white fat cell proliferation","type":"narrow"},{"name":"positive regulation of white adipocyte proliferation","type":"exact"},{"name":"positive regulation of white adipose cell proliferation","type":"exact"},{"name":"stimulation of white fat cell proliferation","type":"narrow"},{"name":"up regulation of white fat cell proliferation","type":"exact"},{"name":"up-regulation of white fat cell proliferation","type":"exact"},{"name":"upregulation of white fat cell proliferation","type":"exact"}],"termid":"GO:0070352"}


id: PBO:0061064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 3","termid":"PBO:0061064"}


id: PBO:0003488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4E 4F complex subunit","termid":"PBO:0003488"}


id: PBO:0038387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_active_ingredient","termid":"PBO:0038387"}


id: MONDO:0018856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lichen amyloidosis is a rare chronic form of cutaneous amyloidosis, a skin disease characterized by the accumulation of amyloid deposits in the dermis, clinically characterized by the development of pruritic, often pigmented, hyperkeratotic papules on trunk and extremities, especially on the shins, and histologically by the deposition of amyloid or amyloid-like proteins in the papillary dermis.","definition_xrefs":["Orphanet:49804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous amyloidosis","termid":"MONDO:0015301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0021179"],"is_obsolete":false,"name":"lichen amyloidosis","secondary_identifiers":["ICD10EXP:E85.4+","SCTID:718105008","UMLS:C5779561","GARD:18839","MEDGEN:1830282","ICD10EXP:L99.0*"],"synonyms":[{"name":"amyloid lichen","type":"exact"},{"name":"lichen amyloidosus","type":"exact"}],"termid":"MONDO:0018856","xrefs":{"Monarch":{"xref_id":"0018856"}}}


id: PBO:0041129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTBD9 antisense RNA 1","termid":"PBO:0041129"}


id: FYPO:0006488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"increased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"increased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0006488"}


id: GO:0047393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol 1,2-cyclic phosphate + H2O = glycerol 1-phosphate + H+.","definition_xrefs":["RHEA:16493","EC:3.1.4.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"glycerol-1,2-cyclic-phosphate 2-phosphodiesterase activity","secondary_identifiers":["KEGG_REACTION:R02648","MetaCyc:3.1.4.42-RXN"],"synonyms":[{"name":"rac-glycerol 1:2-cyclic phosphate 2-phosphodiesterase activity","type":"related"},{"name":"rac-glycerol-1,2-cyclic-phosphate 2-glycerophosphohydrolase activity","type":"related"}],"termid":"GO:0047393"}


id: PR:Q9HDZ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC589.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDZ9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0553 protein C589.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.05c","synonyms":[{"name":"Spom972h-SPAC589.05c","type":"exact"}],"termid":"PR:Q9HDZ9"}


id: PBO:0041888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated auxiliary subunit delta","termid":"PBO:0041888"}


id: PBO:0029120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate","termid":"PBO:0029120"}


id: PBO:0113299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in aromatic amino acid biosynthesis; up-regulated following GCN4 induction, amino acid starvation, rapamycin treatment in GCN4-dependent manner; promoter contains Gcn4 control response element, which is bound by Gcn4p in vivo","termid":"PBO:0113299"}


id: _global:is_kinase_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"_global:molecular_interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","secondary_identifiers":["RO:0002481"],"termid":"_global:is_kinase_activity"}


id: GO:0070417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cold","termid":"GO:0009409"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cold","synonyms":[{"name":"cellular response to cold stress","type":"exact"}],"termid":"GO:0070417"}


id: MONDO:0020735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"Cushing syndrome due to macronodular adrenal hyperplasia","termid":"MONDO:0009049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-independent macronodular adrenal hyperplasia 1","secondary_identifiers":["MEDGEN:347456","UMLS:C1857451","OMIM:219080","DOID:0111623"],"synonyms":[{"name":"ACTH-independent macronodular adrenal hyperplasia","type":"related"},{"name":"ACTH-independent macronodular adrenal hyperplasia, Somatic mutation","type":"exact"},{"name":"ACTH-independent macronodular adrenocortical hyperplasia","type":"related"},{"name":"AIMAH1","type":"related"},{"name":"Cushing syndrome, adrenal, due to AIMAH","type":"related"},{"name":"adrenocorticotropic hormone-independent macronodular adrenal hyperplasia","type":"related"},{"name":"corticotropin-independent macronodular adrenal hyperplasia","type":"related"}],"termid":"MONDO:0020735","xrefs":{"Monarch":{"xref_id":"0020735"}}}


id: MONDO:0014358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"AHDC1-related intellectual disability - obstructive sleep apnea - mild dysmorphism syndrome","secondary_identifiers":["DOID:0070055","GARD:13409","UMLS:C4014419","MEDGEN:862856","Orphanet:412069","OMIM:615829"],"synonyms":[{"name":"AHDC1-related intellectual disability - obstructive sleep apnea - mild dysmorphism syndrome","type":"exact"},{"name":"MRD25","type":"exact"},{"name":"Xia-Gibbs syndrome","type":"exact"},{"name":"autosomal dominant intellectual disability 25","type":"exact"},{"name":"autosomal dominant mental retardation 25","type":"exact"},{"name":"intellectual disability, autosomal dominant 25","type":"related"},{"name":"mental retardation, autosomal dominant 25","type":"related"}],"termid":"MONDO:0014358","xrefs":{"Monarch":{"xref_id":"0014358"}}}


id: GO:0098675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the neuronal dense core vesicle membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of neuronal dense core vesicle membrane (obsolete GO:0098675)","synonyms":[{"name":"intrinsic to neuronal dense core granule membrane","type":"exact"}],"termid":"GO:0098675"}


id: MONDO:1011663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced abomasum, non-human animal","secondary_identifiers":["OMIA:001119"],"termid":"MONDO:1011663","xrefs":{"Monarch":{"xref_id":"1011663"}}}


id: FYPO:0001089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glucosyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glucosyltransferase activity","termid":"FYPO:0001087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased glucosyltransferase activity","termid":"FYPO:0001089"}


id: PBO:0073039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 2","termid":"PBO:0073039"}


id: GO:0140399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: 8-O-methylsterigmatocystin + 2 [reduced NADPH--hemoprotein reductase] + 2 O2 = aflatoxin B + 2 [oxidized NADPH--hemoprotein reductase] + H2O + methanol + CO2. Produces both aflatoxin B(1) and aflatoxin B(2).","definition_xrefs":["EC:1.14.14.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aflatoxin B synthase activity","termid":"GO:0140399"}


id: GO:0052241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a specific chemical on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052241)","synonyms":[{"name":"positive chemotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052241"}


id: GO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microcin B17, a bactericidal peptide (antibiotic) produced by some enteric bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:11292337","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcin transport","termid":"GO:0042884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microcin B17 transport","termid":"GO:0042885"}


id: GO:1901753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene A4.","definition_xrefs":["PMID:23242647","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"leukotriene A4 metabolic process","termid":"GO:1901751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene A4 biosynthetic process","synonyms":[{"name":"LTA4 biosynthesis","type":"exact"},{"name":"eoxin A4 biosynthesis","type":"exact"},{"name":"leukotriene A4 anabolism","type":"exact"},{"name":"leukotriene A4 biosynthesis","type":"exact"},{"name":"leukotriene A4 formation","type":"exact"},{"name":"leukotriene A4 synthesis","type":"exact"}],"termid":"GO:1901753"}


id: FYECO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium containing a high concentration of glucose (~5-8% typically) as carbon source, salts and water.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high glucose MM","synonyms":[{"name":"high glucose minimal medium","type":"exact"}],"termid":"FYECO:0000016"}


id: GO:0070813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hydrogen sulfide, H2S.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"hydrogen sulfide metabolic process","synonyms":[{"name":"hydrogen sulfide metabolism","type":"exact"},{"name":"hydrogen sulphide metabolic process","type":"exact"},{"name":"hydrogen sulphide metabolism","type":"exact"}],"termid":"GO:0070813"}


id: PBO:0079138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 1","termid":"PBO:0079138"}


id: FYECO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which antimycin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ antimycin A","synonyms":[{"name":"respiratory chain inhibitor","type":"related"}],"termid":"FYECO:0000143"}


id: GO:0039532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the series of a cytoplasmic pattern recognition receptor signaling pathway.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","synonyms":[{"name":"negative regulation of MAVS signaling","type":"related"},{"name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway in response to virus","type":"narrow"},{"name":"negative regulation of cytosolic pattern recognition receptor signaling pathway","type":"exact"},{"name":"negative regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway","type":"narrow"},{"name":"negative regulation of viral-induced cytoplasmic pattern recognition receptor signalling pathway","type":"narrow"}],"termid":"GO:0039532"}


id: GO:0008397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a steroid + reduced [NADPH--hemoprotein reductase] + O2 = a 12-alpha-hydroxysteroid + oxidized [NADPH--hemoprotein reductase]- H2O +H+.","definition_xrefs":["EC:1.14.14.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sterol 12-alpha-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP8B1","type":"narrow"}],"termid":"GO:0008397"}


id: PBO:0064375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase, mitochondrial processing subunit beta","termid":"PBO:0064375"}


id: _global:object_label
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"object_label","secondary_identifiers":["https://w3id.org/sssom/object_label"],"termid":"_global:object_label","xrefs":{"Monarch":{"xref_id":"object_label"}}}


id: PBO:0062282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 2","termid":"PBO:0062282"}


id: _global:preceded_by
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"ends_after","termid":"_global:ends_after"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preceded_by","secondary_identifiers":["BFO:0000062"],"termid":"_global:preceded_by"}


id: SO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytologically distinguishable feature of a chromosome, often made visible by staining, and usually alternating light and dark.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_band","secondary_identifiers":["http://en.wikipedia.org/wiki/Cytological_band"],"synonyms":[{"name":"chromosome band","type":"exact"},{"name":"cytoband","type":"exact"},{"name":"cytological band","type":"exact"}],"termid":"SO:0000341"}


id: FYPO:0007534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the threonine residue at position 4 the C-terminal domain of RNA polymerase II occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:30282034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during vegetative growth","synonyms":[{"name":"increased phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during mitotic cell cycle","type":"related"},{"name":"increased phosphorylation of RNA polymerase II CTD threonine 4 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0007534"}


id: GO:1990145
data:
  {"annotated_genes":["SJAG_00269","SJAG_03262","SJAG_06284"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95297,103296,111738,118142],"is_not":false,"summary":null,"term":"GO:1990145"}]},"cv_name":"biological_process","definition":"Suppression of the occurrence of translational errors, such as codon-anticodon mis-paring, during the process of translation of a protein using an mRNA template.","definition_xrefs":["GOC:hjd","ISBN:9781936113460","PMID:21841312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00269":null,"SJAG_03262":null,"SJAG_06284":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"maintenance of translational fidelity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990145","terms_by_termid":{"GO:1990145":null}}


id: PBO:0078795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 16-2","termid":"PBO:0078795"}


id: PBO:0050350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 53","termid":"PBO:0050350"}


id: GO:0031955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain fatty acid + ATP + CoA = a short-chain fatty acyl-CoA + AMP + diphosphate. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["RHEA:52860","PMID:34904027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid-CoA ligase activity","termid":"GO:0120515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"short-chain fatty acid-CoA ligase activity","synonyms":[{"name":"short-chain fatty acid activation","type":"related"},{"name":"short-chain fatty-acid-CoA ligase activity","type":"exact"},{"name":"short-chain-fatty-acid-CoA ligase activity","type":"exact"}],"termid":"GO:0031955"}


id: PBO:0031398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_conjugation","termid":"PBO:0031398"}


id: PBO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal DNA (rDNA) transcription factor Rrn3","termid":"PBO:0001432"}


id: MONDO:0009727
data:
  {"annotated_genes":["SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86268,86269],"is_not":false,"summary":null,"term":"MONDO:0009727"}]},"cv_name":"mondo","definition":"A lethal perinatal bone dysplasia characterized by limb shortening, normal sized skull with cleft palate, hitchhiker thumbs, distinctive facial dysmorphism and radiographic skeletal features, caused by mutations in the diastrophic dysplasia sulfate transporter gene.","definition_xrefs":["Orphanet:56304"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"atelosteogenesis","termid":"MONDO:0000389"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066"],"is_obsolete":false,"name":"atelosteogenesis type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:Q77.5","MESH:C535395","GARD:8329","UMLS:C1850554","OMIM:256050","ICD9:756.9","MEDGEN:338072","SCTID:254055004"],"synonyms":[{"name":"AO2","type":"exact"},{"name":"AOII","type":"exact"},{"name":"De 50A Chapelle dysplasia","type":"related"},{"name":"De la Chapelle dysplasia","type":"related"},{"name":"atelosteogenesis II","type":"related"},{"name":"atelosteogenesis type 2","type":"exact"},{"name":"atelosteogenesis type II","type":"exact"},{"name":"atelosteogenesis, type 2","type":"related"},{"name":"atelosteogenesis, type II","type":"related"},{"name":"neonatal osseous dysplasia 1","type":"related"},{"name":"neonatal osseous dysplasia type 1","type":"exact"}],"termid":"MONDO:0009727","terms_by_termid":{"MONDO:0009727":null},"xrefs":{"Monarch":{"xref_id":"0009727"}}}


id: MONDO:0007329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cirrhosis in which no causative agent can be identified.","definition_xrefs":["NCIT:C84411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"cirrhosis of liver","termid":"MONDO:0005155"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"cirrhosis, familial","secondary_identifiers":["UMLS:C1861556","MEDGEN:350049","MESH:C566123","OMIM:215600","SCTID:6183001"],"synonyms":[{"name":"Indian childhood cirrhosis","type":"related"},{"name":"Sen syndrome","type":"related"},{"name":"cirrhosis, Noncryptogenic, susceptibility to","type":"related"},{"name":"cirrhosis, cryptogenic","type":"related"},{"name":"cirrhosis, familial","type":"exact"},{"name":"cirrhosis, familial, with pulmonary hypertension","type":"related"},{"name":"copper toxicosis, idiopathic","type":"related"},{"name":"copper-overload cirrhosis","type":"related"},{"name":"cryptogenic cirrhosis","type":"exact"},{"name":"endemic Tyrolean infantile cirrhosis","type":"related"},{"name":"hereditary cirrhosis of liver","type":"exact"}],"termid":"MONDO:0007329","xrefs":{"Monarch":{"xref_id":"0007329"}}}


id: PR:P21911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11921:SF7","OMA:SCHPO00778","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.01","secondary_identifiers":["UniProtKB:P21911"],"synonyms":[{"name":"Ip (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SDHB","type":"exact"},{"name":"iron-sulfur subunit of complex II (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P21911"}


id: GO:1902703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to butan-1-ol.","definition_xrefs":["PMID:18727018","GOC:TermGenie","GO_REF:0000093","PMID:19539744","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to butan-1-ol (obsolete GO:1902703)","synonyms":[{"name":"hexose breakdown to butan-1-ol","type":"exact"},{"name":"hexose catabolic process to 1-butanol","type":"exact"},{"name":"hexose catabolic process to butanol","type":"exact"},{"name":"hexose catabolism to butan-1-ol","type":"exact"},{"name":"hexose degradation to butan-1-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902703"}


id: PBO:0075348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerostin","termid":"PBO:0075348"}


id: GO:0046417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chorismate, the anion of (3R-trans)-3-((1-carboxyethenyl)oxy)-4-hydroxy-1,5-cyclohexadiene-1-carboxylic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"chorismate metabolic process","synonyms":[{"name":"chorismate metabolism","type":"exact"}],"termid":"GO:0046417"}


id: GO:2000038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stomatal complex development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"stomatal complex development","termid":"GO:0010374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomatal complex development","termid":"GO:2000038"}


id: MONDO:0800421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy, familial hypertrophic, 4, susceptibility to","secondary_identifiers":["MEDGEN:414013","UMLS:C2751427"],"termid":"MONDO:0800421","xrefs":{"Monarch":{"xref_id":"0800421"}}}


id: PR:000045540
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 1 (Schizosaccharomyces pombe) that has been phosphorylated on a Thr residue (Thr-167) within the T-Loop, and not phosphorylated on the ATP binding region (Thr-14 or Tyr-15). UniProtKB:P04551, Thr-14/Tyr-15, PR:000026291|Thr-167, MOD:00047.","definition_xrefs":["PMID:26131711","PRO:CNA","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc2/Phos(T167)UnPhos(T14,Y15)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"Cdc2 phosphorylated 1","type":"related"},{"name":"Cdc2-Hc","type":"narrow"},{"name":"Cdc2-Hd","type":"narrow"},{"name":"PomBase_original_PRO_term_name: cyclin-dependent kinase 1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc2/Phos:1","type":"exact"},{"name":"UniProtKB:P04551, Thr-14/Tyr-15, PR:000026291|Thr-167, MOD:00047","type":"exact"},{"name":"cdc2/Phos(T167)UnPhos(T14,Y15)","type":"exact"}],"termid":"PR:000045540"}


id: PR:Q06182
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q06182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type switching protein swi10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.15c","synonyms":[{"name":"Spom972h-swi10","type":"exact"}],"termid":"PR:Q06182"}


id: MOD:01020
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioanisyl","termid":"MOD:01020"}


id: PBO:0030180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_growth","termid":"PBO:0030180"}


id: PBO:0076802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 3","termid":"PBO:0076802"}


id: MOD:00866
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to one of several dihydroxylated proline residues, such as (2S,3R,4R)-3,4-dihydroxyproline or (2S,3R,4S)-3,4-dihydroxyproline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated proline","termid":"MOD:00678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxylated proline","synonyms":[{"name":"Hy2Pro","type":"exact"}],"termid":"MOD:00866"}


id: PBO:0072606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 1","termid":"PBO:0072606"}


id: GO:0009573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the chloroplast, containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribulose bisphosphate carboxylase complex","termid":"GO:0048492"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chloroplast ribulose bisphosphate carboxylase complex","synonyms":[{"name":"chloroplast RubisCO complex","type":"exact"}],"termid":"GO:0009573"}


id: PBO:0035889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_processing_during_vegetative_growth","termid":"PBO:0035889"}


id: PBO:0052716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 8","termid":"PBO:0052716"}


id: GO:0010069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of the zygote in a plane perpendicular to the long axis of the embryo sac to produce a larger basal cell near the micropyle and a small terminal cell close to what was the central cell and is now the developing endosperm. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tb","ISBN:0865427429","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cytokinesis","termid":"GO:0000281"},{"relation_name":"is_a","term_name":"zygote asymmetric cell division","termid":"GO:0010070"},{"relation_name":"part_of","term_name":"embryo development ending in seed dormancy","termid":"GO:0009793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"zygote asymmetric cytokinesis in embryo sac","termid":"GO:0010069"}


id: PBO:0082757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate with other rods to form filaments; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells","termid":"PBO:0082757"}


id: PBO:0088619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk31","termid":"PBO:0088619"}


id: PBO:0065414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 3","termid":"PBO:0065414"}


id: GO:0006270
data:
  {"annotated_genes":["SJAG_02607","SJAG_02162","SJAG_00857","SJAG_02394","SJAG_00874","SJAG_00884","SJAG_02908","SJAG_03695","SJAG_03438","SJAG_00327","SJAG_04994","SJAG_04879","SJAG_00696","SJAG_01823","SJAG_03927","SJAG_03160","SJAG_01762","SJAG_02800","SJAG_03048","SJAG_02348","SJAG_00536","SJAG_00364","SJAG_02667","SJAG_01210","SJAG_04995","SJAG_04671","SJAG_00311","SJAG_01267","SJAG_02098","SJAG_02172","SJAG_05239","SJAG_02074","SJAG_04341","SJAG_02627","SJAG_04210","SJAG_03451","SJAG_05301","SJAG_01624","SJAG_01354","SJAG_00399","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89956,92493,93443,96828,96927,98913,104799,107300,107514,111093,111349,111481,111882,112619,112924,113007,114719,116777],"is_not":false,"summary":null,"term":"GO:0006270"},{"annotations":[109403,113006,106813,114849],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[102804],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[96931,109679,112599,98921,106816,116779,106714,91468,105895,94056,114722,114853,114551,110011,98858,92494,110838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902975"},{"annotations":[108350,101858,97271],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[102441,96932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902315"},{"annotations":[102807,111487,116718],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[88574,115679,101864,106087],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904514"}]},"cv_name":"biological_process","definition":"The process in which DNA-dependent DNA replication is started; it begins when specific sequences, known as origins of replication, are recognized and bound by the origin recognition complex, followed by DNA unwinding.","definition_xrefs":["PMID:28209641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01210":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02162":null,"SJAG_02172":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_02908":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03451":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03927":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04671":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-68962","GO:0042024","Reactome:R-HSA-68952"],"synonyms":[{"name":"DNA endoreduplication initiation","type":"narrow"},{"name":"DNA re-replication initiation","type":"narrow"},{"name":"DNA-dependent DNA replication initiation","type":"exact"}],"termid":"GO:0006270","terms_by_termid":{"GO:0006270":null,"GO:0140529":null,"GO:0140530":null,"GO:1902315":null,"GO:1902975":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: PBO:0087964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of the ATP-binding cassette (ABC) family; involved in bile acid transport; negative regulator of vacuole fusion; regulates release of lumenal Ca2+ stores; similar to mammalian bile transporters; YBT1 has a paralog, VMR1, that arose from the whole genome duplication","termid":"PBO:0087964"}


id: PATO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000746 consumption value (obsolete PATO:0000746)","termid":"PATO:0000746"}


id: GO:0080105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-methylthiopropyl-glucosinolate = 6-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"6-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080105"}


id: GO:0002857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated immune response to a tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated immunity","termid":"GO:0002717"},{"relation_name":"is_a","term_name":"positive regulation of immune response to tumor cell","termid":"GO:0002839"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002855"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated immune response to tumor cell","termid":"GO:0002423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated immune response to tumor cell","synonyms":[{"name":"activation of natural killer cell mediated immune response to tumor cell","type":"narrow"},{"name":"stimulation of natural killer cell mediated immune response to tumor cell","type":"narrow"},{"name":"up regulation of natural killer cell mediated immune response to tumor cell","type":"exact"},{"name":"up-regulation of natural killer cell mediated immune response to tumor cell","type":"exact"},{"name":"upregulation of natural killer cell mediated immune response to tumor cell","type":"exact"}],"termid":"GO:0002857"}


id: MONDO:0011163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any malignant hyperthermia of anesthesia in which the cause of the disease is a mutation in the CACNA1S gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, susceptibility to","termid":"MONDO:0800188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, susceptibility to, 5","secondary_identifiers":["MEDGEN:356151","MESH:C535698","OMIM:601887","UMLS:C1866077"],"synonyms":[{"name":"CACNA1S malignant hyperthermia of anaesthesia","type":"exact"},{"name":"CACNA1S malignant hyperthermia of anesthesia","type":"exact"},{"name":"MHS5","type":"related"},{"name":"Mhs5","type":"related"},{"name":"malignant hyperpyrexia susceptibility type 5","type":"related"},{"name":"malignant hyperthermia of anaesthesia caused by mutation in CACNA1S","type":"exact"},{"name":"malignant hyperthermia of anesthesia caused by mutation in CACNA1S","type":"exact"},{"name":"malignant hyperthermia susceptibility 5","type":"exact"},{"name":"malignant hyperthermia susceptibility type 5","type":"related"},{"name":"malignant hyperthermia, susceptibility to, 5","type":"exact"},{"name":"malignant hyperthermia, susceptibility to, type 5","type":"exact"},{"name":"susceptibility to malignant hyperthermia 5","type":"related"}],"termid":"MONDO:0011163","xrefs":{"Monarch":{"xref_id":"0011163"}}}


id: GO:0045089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of innate immune response","synonyms":[{"name":"stimulation of innate immune response","type":"narrow"},{"name":"up regulation of innate immune response","type":"exact"},{"name":"up-regulation of innate immune response","type":"exact"},{"name":"upregulation of innate immune response","type":"exact"}],"termid":"GO:0045089"}


id: PBO:0040433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A1","termid":"PBO:0040433"}


id: PBO:0069378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 638, pseudogene","termid":"PBO:0069378"}


id: GO:0014833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The asymmetric division of a skeletal muscle satellite stem cell to produce two daughter cells, one of which is destined to differentiate and the other to be a quiescent cell that restocks the satellite cell pool.","definition_xrefs":["GOC:ef","GOC:mtg_muscle","PMID:16607119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic stem cell division","termid":"GO:0048103"},{"relation_name":"is_a","term_name":"asymmetric stem cell division","termid":"GO:0098722"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite stem cell asymmetric division","synonyms":[{"name":"satellite cell asymmetric division","type":"exact"}],"termid":"GO:0014833"}


id: GO:1905944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["GO_REF:0000058","PMID:19737525","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sprouting of injured axon","termid":"GO:0048687"},{"relation_name":"is_a","term_name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"},{"relation_name":"positively_regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of growth cone in injured axon","synonyms":[{"name":"activation of formation of growth cone in injured axon","type":"narrow"},{"name":"up regulation of formation of growth cone in injured axon","type":"exact"},{"name":"up-regulation of formation of growth cone in injured axon","type":"exact"},{"name":"upregulation of formation of growth cone in injured axon","type":"exact"}],"termid":"GO:1905944"}


id: SO:0002259
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region defined by a cluster of experimentally determined polyadenylation sites, typically less than 25 bp in length and associated with a single polyadenylation signal.","definition_xrefs":["PMID:24072873","PMID:17202160","PMID:25906188"],"direct_ancestors":[{"relation_name":"has_part","term_name":"polyA_site","termid":"SO:0000553"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyA_site_cluster","synonyms":[{"name":"polyA cluster","type":"exact"},{"name":"polyA site cluster","type":"exact"},{"name":"polyA_cluster","type":"exact"}],"termid":"SO:0002259"}


id: GO:0097290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of alpha-ribazole, the benzimidazole nucleoside in adenosyl cobalamin (vitamin B12).","definition_xrefs":["GOC:yaf","MetaCyc:PWY-6269","MetaCyc:PWY-5508","UniPathway:UPA00061"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-ribazole biosynthetic process (obsolete GO:0097290)","synonyms":[{"name":"alpha-ribazole anabolism","type":"exact"},{"name":"alpha-ribazole biosynthesis","type":"exact"},{"name":"alpha-ribazole formation","type":"exact"},{"name":"alpha-ribazole synthesis","type":"exact"}],"termid":"GO:0097290"}


id: PBO:0014575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor","termid":"PBO:0014575"}


id: PBO:0082579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cholinephosphate cytidylyltransferase; a rate-determining enzyme of the CDP-choline pathway for phosphatidylcholine synthesis, inhibited by Sec14p, activated upon lipid-binding; controls phosphatidylcholine homeostasis; contains an element within the regulatory domain involved in both silencing and activation of enzymatic activity","termid":"PBO:0082579"}


id: PBO:0075675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT2 chromatin protein domain containing 1","termid":"PBO:0075675"}


id: MONDO:0004390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally low intraocular pressure often related to chronic inflammation (uveitis).","definition_xrefs":["MESH:D015814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular hypotension","secondary_identifiers":["SCTID:19721008","MEDGEN:10424","UMLS:C0028841","ICD9:360.3","DOID:790","ICD9:360.30"],"synonyms":[{"name":"hypotony of eye","type":"exact"}],"termid":"MONDO:0004390","xrefs":{"Monarch":{"xref_id":"0004390"}}}


id: PBO:0110418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNE3 antisense RNA 1","termid":"PBO:0110418"}


id: MONDO:0020350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Miller-Fisher syndrome (obsolete MONDO:0020350)","termid":"MONDO:0020350","xrefs":{"Monarch":{"xref_id":"0020350"}}}


id: PBO:0001704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR191","termid":"PBO:0001704"}


id: GO:0019775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of FAT10 from one protein to another via the reaction X-FAT10 + Y = Y-FAT10 + X, where both X-FAT10 and Y-FAT10 are covalent linkages.","definition_xrefs":["GOC:dph","GOC:mah","PMID:12826404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0019787","GO:0140096","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"FAT10 transferase activity","synonyms":[{"name":"FAT10 conjugating enzyme activity","type":"narrow"}],"termid":"GO:0019775"}


id: MONDO:0000872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute B-lymphoblastic leukemia occurring in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"childhood acute lymphoblastic leukemia","termid":"MONDO:0000870"},{"relation_name":"is_a","term_name":"precursor B-cell acute lymphoblastic leukemia","termid":"MONDO:0020511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"B-cell childhood acute lymphoblastic leukemia","secondary_identifiers":["EFO:1001946","NCIT:C9140","DOID:0080146","UMLS:C0279584","NANDO:2200002","MEDGEN:83526"],"synonyms":[{"name":"B acute lymphoblastic leukaemia","type":"broad"},{"name":"B acute lymphoblastic leukemia","type":"broad"},{"name":"B cell childhood ALL","type":"exact"},{"name":"B cell childhood acute lymphoblastic leukaemia","type":"exact"},{"name":"B cell childhood acute lymphoblastic leukemia","type":"exact"},{"name":"B cell childhood acute lymphocytic leukaemia","type":"exact"},{"name":"B cell childhood acute lymphocytic leukemia","type":"exact"},{"name":"B cell paediatric ALL","type":"exact"},{"name":"B cell paediatric acute lymphoblastic leukaemia","type":"exact"},{"name":"B cell paediatric acute lymphocytic leukaemia","type":"exact"},{"name":"B cell pediatric ALL","type":"exact"},{"name":"B cell pediatric acute lymphoblastic leukemia","type":"exact"},{"name":"B cell pediatric acute lymphocytic leukemia","type":"exact"},{"name":"B-cell childhood ALL","type":"exact"},{"name":"B-cell childhood acute lymphocytic leukaemia","type":"exact"},{"name":"B-cell childhood acute lymphocytic leukemia","type":"exact"},{"name":"B-cell childhood acute lymphogenous leukaemia","type":"exact"},{"name":"B-cell childhood acute lymphogenous leukemia","type":"exact"},{"name":"B-cell childhood acute lymphoid leukaemia","type":"exact"},{"name":"B-cell childhood acute lymphoid leukemia","type":"exact"},{"name":"B-cell paediatric ALL","type":"exact"},{"name":"B-cell paediatric acute lymphoblastic leukaemia","type":"exact"},{"name":"B-cell paediatric acute lymphocytic leukaemia","type":"exact"},{"name":"B-cell paediatric acute lymphogenous leukaemia","type":"exact"},{"name":"B-cell paediatric acute lymphoid leukaemia","type":"exact"},{"name":"B-cell pediatric ALL","type":"exact"},{"name":"B-cell pediatric acute lymphoblastic leukemia","type":"exact"},{"name":"B-cell pediatric acute lymphocytic leukemia","type":"exact"},{"name":"B-cell pediatric acute lymphogenous leukemia","type":"exact"},{"name":"B-cell pediatric acute lymphoid leukemia","type":"exact"},{"name":"childhood B acute lymphoblastic leukaemia","type":"exact"},{"name":"childhood B acute lymphoblastic leukemia","type":"exact"},{"name":"childhood B-ALL","type":"exact"},{"name":"childhood precursor B-lymphoblastic leukaemia","type":"exact"},{"name":"childhood precursor B-lymphoblastic leukemia","type":"exact"}],"termid":"MONDO:0000872","xrefs":{"Monarch":{"xref_id":"0000872"}}}


id: GO:0102407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: C22:0-DCA-CoA + sn-glycerol 3-phosphate = coenzyme A + 2-C22:0-DCA-LPA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate C22:0-DCA-CoA acyl transferase activity (obsolete GO:0102407)","termid":"GO:0102407"}


id: PBO:0029486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_ergosterol_level","termid":"PBO:0029486"}


id: GO:0009188
data:
  {"annotated_genes":["SJAG_02038","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[115021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[115022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleoside diphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate biosynthetic process","termid":"GO:0009133"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate metabolic process","termid":"GO:0009185"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_02038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside diphosphate anabolism","type":"exact"},{"name":"ribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"ribonucleoside diphosphate formation","type":"exact"},{"name":"ribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009188","terms_by_termid":{"GO:0006172":null,"GO:0006225":null,"GO:0046705":null}}


id: MONDO:0012725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"lipoprotein glomerulopathy","secondary_identifiers":["GARD:17504","icd11.foundation:69778702","MEDGEN:382034","NANDO:2200134","OMIM:611771","ICD9:593.89","SCTID:446923008","UMLS:C2673196","Orphanet:329481","ICD9:272.8","MESH:C567089"],"synonyms":[{"name":"LPG","type":"exact"},{"name":"lipoprotein glomerulopathy","type":"exact"}],"termid":"MONDO:0012725","xrefs":{"Monarch":{"xref_id":"0012725"}}}


id: MONDO:1010730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any severe combined immunodeficiency disease in golden hamsters in which the cause of the disease is a mutation in the IL2RG gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency disease, non-human animal","termid":"MONDO:1011422"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked severe combined immunodeficiency disease, IL2RG-related, golden hamster","secondary_identifiers":["OMIA:000899-10036"],"termid":"MONDO:1010730","xrefs":{"Monarch":{"xref_id":"1010730"}}}


id: PBO:0060380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin regulatory factor like","termid":"PBO:0060380"}


id: GO:0048509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem development, the biological process whose specific outcome is the progression of the meristem over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem development","termid":"GO:0048509"}


id: PBO:0000984
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.47","termid":"PBO:0000984"}


id: PBO:0086483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative, non-essential component vacuolar ATPase; conserved in fungi; SWAT-GFP fusion protein localizes to vacuole membrane; partially overlaps the dubious genes YPR169W-A, YPR170W-A and YRP170C","termid":"PBO:0086483"}


id: MONDO:0021299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the extrahepatic bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct carcinoma in situ","termid":"MONDO:0000374"},{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma in situ of extrahepatic bile duct","secondary_identifiers":["NCIT:C4442","UMLS:C0345914","MEDGEN:138028","SCTID:92589000"],"synonyms":[{"name":"carcinoma in situ of extrahepatic bile duct","type":"exact"},{"name":"carcinoma in situ of extrahepatic bile ducts","type":"exact"},{"name":"carcinoma in situ of extrahepatic biliary ducts","type":"exact"},{"name":"carcinoma in situ of the extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct cancer stage 0","type":"exact"},{"name":"extrahepatic bile duct carcinoma in situ","type":"exact"},{"name":"extrahepatic bile duct in situ carcinoma","type":"exact"},{"name":"extrahepatic biliary duct carcinoma in situ","type":"exact"},{"name":"stage 0 carcinoma of extrahepatic bile duct","type":"exact"},{"name":"stage 0 carcinoma of the extrahepatic bile duct","type":"exact"},{"name":"stage 0 extrahepatic bile duct cancer","type":"exact"},{"name":"stage 0 extrahepatic bile duct carcinoma","type":"exact"},{"name":"stage 0 extrahepatic bile duct carcinoma in situ","type":"exact"}],"termid":"MONDO:0021299","xrefs":{"Monarch":{"xref_id":"0021299"}}}


id: PBO:0002181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-actinin","termid":"PBO:0002181"}


id: PBO:0086221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap185p; SAP190 has a paralog, SAP185, that arose from the whole genome duplication","termid":"PBO:0086221"}


id: GO:0007201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete G-protein dissociation (obsolete GO:0007201)","synonyms":[{"name":"G-protein dissociation","type":"exact"}],"termid":"GO:0007201"}


id: GO:0075508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral penetration into the host nucleus where a viral capsid enters the host nuclear pore complex (NPC) but remains attached to the pore on the nuclear side. The capsid then disassembles, releasing the viral genome into the nucleoplasm.","definition_xrefs":["PMID:22929056","VZ:989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral penetration into host nucleus","termid":"GO:0075732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry of viral genome into host nucleus via retainment of capsid in nuclear pore complex and release of genome into nucleoplasm","synonyms":[{"name":"entry of viral genome into host nucleus via attachment of capsid to nuclear pore complex and release of genome into nucleoplasm","type":"exact"}],"termid":"GO:0075508"}


id: GO:0071632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Eye, head or whole body movements that help to compensate movements of the environment in order to stabilize its image on the retina. In the case of whole body movements, these motor actions may also stabilize a locomotor course in response to some disturbance. Examples include: the optokinetic reflex, which allows human eyes to follow objects in motion while the head remains stationary reflex; the optomotor responses of flying insects and swimming fish.","definition_xrefs":["PMID:2469195","GOC:dos","PMID:12726833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optokinetic behavior","termid":"GO:0007634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optomotor response","secondary_identifiers":["Wikipedia:Optomotor_response"],"termid":"GO:0071632"}


id: PBO:0086967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit B of protein phosphatase 2A (PP2A); Zds1p/2p-dependent localization to cytoplasm promotes mitotic entry; localization to nucleus prevents mitotic exit; required for correct nuclear division, chromosome segregation during achiasmate meiosis; maintains nucleolar sequestration of Cdc14p in early meiosis; limits formation of PP2A-Rts1p holocomplexes to ensure timely dissolution of sister chromosome cohesion; controls phosphorylation and stability of Cln2p; homolog of mammalian B55","termid":"PBO:0086967"}


id: SO:0001471
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an RST sequence.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RST_match","synonyms":[{"name":"RST match","type":"exact"}],"termid":"SO:0001471"}


id: GO:0080153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the reductive pentose-phosphate cycle.","definition_xrefs":["PMID:20399532","PMID:17031544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of reductive pentose-phosphate cycle","termid":"GO:0080152"},{"relation_name":"is_a","term_name":"negative regulation of photosynthesis","termid":"GO:1905156"},{"relation_name":"negatively_regulates","term_name":"reductive pentose-phosphate cycle","termid":"GO:0019253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of reductive pentose-phosphate cycle","synonyms":[{"name":"negative regulation of C3 photosynthesis","type":"narrow"},{"name":"negative regulation of Calvin cycle","type":"narrow"}],"termid":"GO:0080153"}


id: GO:1905003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving picolinic acid.","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:19843166","GO_REF:0000068","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"picolinic acid metabolic process","synonyms":[{"name":"picolinate metabolism","type":"exact"},{"name":"picolinic acid metabolism","type":"exact"}],"termid":"GO:1905003"}


id: MONDO:0009398
data:
  {"annotated_genes":["SJAG_00295"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85853],"is_not":false,"summary":null,"term":"MONDO:0009398"}]},"cv_name":"mondo","definition":"Any hyperphosphatasia-intellectual disability syndrome in which the cause of the disease is a mutation in the PIGV gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphosphatasia-intellectual disability syndrome","termid":"MONDO:0016596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"hyperphosphatasia with intellectual disability syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:239300","GARD:18349","UMLS:C4551502","MEDGEN:1647044","DOID:0070433"],"synonyms":[{"name":"HPMRS1","type":"related"},{"name":"Mabry syndrome","type":"related"},{"name":"PIGV hyperphosphatasia-intellectual disability syndrome","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 2","type":"related"},{"name":"hyperphosphatasia with intellectual disability syndrome 1","type":"exact"},{"name":"hyperphosphatasia with intellectual disability syndrome type 1","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome 1","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome type 1","type":"exact"},{"name":"hyperphosphatasia-intellectual disability syndrome caused by mutation in PIGV","type":"exact"}],"termid":"MONDO:0009398","terms_by_termid":{"MONDO:0009398":null},"xrefs":{"Monarch":{"xref_id":"0009398"}}}


id: GO:0055007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cardiac muscle precursor cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["GOC:mtg_heart","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"striated muscle cell differentiation","termid":"GO:0051146"},{"relation_name":"part_of","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell differentiation","synonyms":[{"name":"cardiomyocyte differentiation","type":"exact"},{"name":"heart muscle cell differentiation","type":"related"}],"termid":"GO:0055007"}


id: PBO:0041500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 71B, pseudogene","termid":"PBO:0041500"}


id: GO:0030382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of sperm mitochondria; the process in which they take on their characteristic morphology; they are flattened, elongated, and arranged circumferentially into a tight helical coil around the tail-dense fibers of the mature sperm.","definition_xrefs":["GOC:dph","GOC:mah","PMID:8833144","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"sperm mitochondrion organization","synonyms":[{"name":"sperm mitochondria organisation","type":"exact"},{"name":"sperm mitochondria organization and biogenesis","type":"related"},{"name":"sperm mitochondrion organization and biogenesis","type":"related"}],"termid":"GO:0030382"}


id: PBO:0048277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 13","termid":"PBO:0048277"}


id: GO:0045141
data:
  {"annotated_genes":["SJAG_03685","SJAG_01777","SJAG_03287","SJAG_05226","SJAG_05196","SJAG_01263","SJAG_03092","SJAG_05260","SJAG_01538","SJAG_03680","SJAG_00756"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86920,96217,105422,115388,116999,117137],"is_not":false,"summary":null,"term":"GO:0045141"},{"annotations":[105421,89275],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[104573,86919,102306,99416,89276],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[105423,113429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the dynamic reorganization of telomeres occurs in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body. This plays an important role in progression through meiosis and precedes synapsis.","definition_xrefs":["GOC:vw","PMID:10690419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere localization","termid":"GO:0034397"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"chromosome localization to nuclear envelope involved in homologous chromosome segregation","termid":"GO:0090220"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00756":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"meiotic telomere clustering","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"bouquet biosynthesis","type":"narrow"},{"name":"bouquet formation","type":"narrow"}],"termid":"GO:0045141","terms_by_termid":{"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0070197":null}}


id: PBO:0090958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S19","termid":"PBO:0090958"}


id: PBO:0028744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0028744"}


id: PBO:0075427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPAG16 divergent transcript","termid":"PBO:0075427"}


id: GO:0160028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of a pyroptotic inflammatory response.","definition_xrefs":["PMID:34637033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"negatively_regulates","term_name":"pyroptotic inflammatory response","termid":"GO:0070269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pyroptotic inflammatory response","synonyms":[{"name":"negative regulation of pyroptosis","type":"broad"}],"termid":"GO:0160028"}


id: MONDO:0014595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SIK1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early myoclonic encephalopathy","termid":"MONDO:0016022"},{"relation_name":"is_a","term_name":"West syndrome","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 30","secondary_identifiers":["UMLS:C4225360","DOID:0080465","OMIM:616341","GARD:16093","MEDGEN:898954"],"synonyms":[{"name":"DEE30","type":"exact"},{"name":"EIEE30","type":"exact"},{"name":"SIK1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 30","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SIK1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 30","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 30","type":"exact"}],"termid":"MONDO:0014595","xrefs":{"Monarch":{"xref_id":"0014595"}}}


id: GO:0010875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol efflux","termid":"GO:0010874"},{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"positively_regulates","term_name":"cholesterol efflux","termid":"GO:0033344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of cholesterol efflux","termid":"GO:0010875"}


id: MONDO:0020341
data:
  {"annotated_genes":["SJAG_04600","SJAG_02824","SJAG_01025","SJAG_03970","SJAG_02160","SJAG_01360"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84571,84570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011966"},{"annotations":[86498,86499,86500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014966"},{"annotations":[85801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032588"}]},"cv_name":"mondo","definition":"Periventricular nodular heterotopia (PNH) is a brain malformation, due to abnormal neuronal migration, in which a subset of neurons fails to migrate into the developing cerebral cortex and remains as nodules that line the ventricular surface. Classical PNH is a rare X-linked dominant disorder far more frequent in females who present normal intelligence to borderline intellectual deficit, epilepsy of variable severity and extra-central nervous system signs, especially cardiovascular defects or coagulopathy. The disorder is generally associated with prenatal lethality in males.","definition_xrefs":["Orphanet:98892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"nodular neuronal heterotopia","termid":"MONDO:0016292"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01025":null,"SJAG_01360":null,"SJAG_02160":null,"SJAG_02824":null,"SJAG_03970":null,"SJAG_04600":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"periventricular nodular heterotopia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D054091","NANDO:1201079","UMLS:C1868720","MedDRA:10066854","DOID:0050454","GARD:12724","icd11.foundation:20200096","MEDGEN:358387","OMIMPS:300049"],"synonyms":[{"name":"periventricular heterotopia","type":"exact"},{"name":"periventricular nodular heterotopia","type":"exact"}],"termid":"MONDO:0020341","terms_by_termid":{"MONDO:0011966":null,"MONDO:0014966":null,"MONDO:0032588":null},"xrefs":{"Monarch":{"xref_id":"0020341"}}}


id: MONDO:0700188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Synovial cell sarcoma occurring in a cat.","definition_xrefs":["NCIT:C181658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline synovial cell sarcoma","termid":"MONDO:0700188","xrefs":{"Monarch":{"xref_id":"0700188"}}}


id: GO:0048161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when a double layer of distinct follicle cells surrounds the oocyte. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198542771","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"double layer follicle stage","synonyms":[{"name":"mammalian oogenesis stage 4","type":"exact"}],"termid":"GO:0048161"}


id: FYPO:0006822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable and elongates at a normal rate, but divides when a shorter time than normal has elapsed since the previous cell division. Daughter cells therefore have an abnormally low volume. Note that these small viable cells result from a cell cycle size regulation defect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"premature mitosis","termid":"FYPO:0001046"},{"relation_name":"has_part","term_name":"normal vegetative cell growth rate","termid":"FYPO:0006819"},{"relation_name":"is_a","term_name":"viable small vegetative cell","termid":"FYPO:0000648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0000631","FYPO:0000004","FYPO:0001985","FYPO:0000257","FYPO:0001320","FYPO:0000337","FYPO:0005447"],"is_obsolete":false,"name":"viable small vegetative cell with normal cell growth rate","synonyms":[{"name":"mitosis with small cell size and normal cell growth rate","type":"related"},{"name":"reduced size at cell division with normal cell growth rate","type":"related"},{"name":"small viable vegetative cell with normal cell growth rate","type":"exact"},{"name":"viable small cell with normal cell growth rate during vegetative growth","type":"exact"},{"name":"viable small vegetative cell with normal cell growth rate","type":"broad"},{"name":"viable small vegetative cell with normal cell growth rate during mitotic cell cycle","type":"related"},{"name":"viable small vegetative cell with premature mitosis","type":"exact"},{"name":"wee","type":"exact"}],"termid":"FYPO:0006822"}


id: PBO:0018195
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe PNuts","termid":"PBO:0018195"}


id: SO:0000237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_attribute","synonyms":[{"name":"transcript attribute","type":"exact"}],"termid":"SO:0000237"}


id: PBO:0083147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF GND1/YHR183W","termid":"PBO:0083147"}


id: PBO:0045789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymal protein 3D, pseudogene","termid":"PBO:0045789"}


id: PBO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase Tkt1","termid":"PBO:0090424"}


id: PBO:0068027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 332","termid":"PBO:0068027"}


id: PBO:0028777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caffeine_and_rapamycin","termid":"PBO:0028777"}


id: GO:0032942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,2,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["PMID:16107538","MetaCyc:RXN-7182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"inositol-1,4,5,6-tetrakisphosphate 2-kinase activity","synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 2-kinase activity","type":"broad"},{"name":"inositol tetrakisphosphate 2-kinase activity","type":"broad"},{"name":"inositol-tetrakisphosphate 2-kinase activity","type":"broad"}],"termid":"GO:0032942"}


id: MONDO:0100249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"46,XX testicular disorder of sex development (46,XX testicular DSD) is characterized by male external genitalia, ranging from normal to ambiguous with associated testosterone deficiency.","definition_xrefs":["Orphanet:393"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"},{"relation_name":"is_a","term_name":"46,XX disorder of sex development","termid":"MONDO:0017576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XX testicular disorder of sex development","secondary_identifiers":["MEDGEN:424734","UMLS:C2936419","icd11.foundation:1357942532","DOID:0111760","MESH:D058531","GARD:399","NCIT:C127170"],"synonyms":[{"name":"46, XX gonadal sex reversal","type":"related"},{"name":"46,XX testicular DSD","type":"exact"},{"name":"46,XX testicular differences of sex development","type":"exact"},{"name":"46,XX testicular disorder of sex development","type":"exact"},{"name":"46,XX testicular disorders of Sex development","type":"exact"},{"name":"De la Chapelle syndrome","type":"exact"},{"name":"XX Male, Sry-positive","type":"related"},{"name":"XX male syndrome","type":"related"},{"name":"XX sex reversal","type":"related"},{"name":"XX, male syndrome","type":"exact"}],"termid":"MONDO:0100249","xrefs":{"Monarch":{"xref_id":"0100249"}}}


id: GO:0043483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the pigment anthocyanin, contributing to anthocyanin accumulation in a tissue in response to a UV light stimulus.","definition_xrefs":["GOC:dph","GOC:tb","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anthocyanin-containing compound biosynthetic process","termid":"GO:0009718"},{"relation_name":"is_a","term_name":"pigment biosynthetic process involved in pigment accumulation","termid":"GO:0043477"},{"relation_name":"part_of","term_name":"anthocyanin accumulation in tissues in response to UV light","termid":"GO:0043481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anthocyanin biosynthetic process involved in anthocyanin accumulation in response to UV light","synonyms":[{"name":"anthocyanin biosynthesis during anthocyanin accumulation in tissues in response to UV light stimulus","type":"related"},{"name":"anthocyanin biosynthetic process during anthocyanin accumulation in response to UV light","type":"related"},{"name":"anthocyanin biosynthetic process during anthocyanin accumulation in tissues in response to UV light stimulus","type":"related"}],"termid":"GO:0043483"}


id: GO:1900677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of F-9775B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of F-9775B biosynthetic process","termid":"GO:1900675"},{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"positively_regulates","term_name":"F-9775B biosynthetic process","termid":"GO:1900614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of F-9775B biosynthetic process","synonyms":[{"name":"activation of F-9775B anabolism","type":"exact"},{"name":"activation of F-9775B biosynthesis","type":"exact"},{"name":"activation of F-9775B biosynthetic process","type":"narrow"},{"name":"activation of F-9775B formation","type":"exact"},{"name":"activation of F-9775B synthesis","type":"exact"},{"name":"positive regulation of F-9775B anabolism","type":"exact"},{"name":"positive regulation of F-9775B biosynthesis","type":"exact"},{"name":"positive regulation of F-9775B formation","type":"exact"},{"name":"positive regulation of F-9775B synthesis","type":"exact"},{"name":"up regulation of F-9775B anabolism","type":"exact"},{"name":"up regulation of F-9775B biosynthesis","type":"exact"},{"name":"up regulation of F-9775B biosynthetic process","type":"exact"},{"name":"up regulation of F-9775B formation","type":"exact"},{"name":"up regulation of F-9775B synthesis","type":"exact"},{"name":"up-regulation of F-9775B anabolism","type":"exact"},{"name":"up-regulation of F-9775B biosynthesis","type":"exact"},{"name":"up-regulation of F-9775B biosynthetic process","type":"exact"},{"name":"up-regulation of F-9775B formation","type":"exact"},{"name":"up-regulation of F-9775B synthesis","type":"exact"},{"name":"upregulation of F-9775B anabolism","type":"exact"},{"name":"upregulation of F-9775B biosynthesis","type":"exact"},{"name":"upregulation of F-9775B biosynthetic process","type":"exact"},{"name":"upregulation of F-9775B formation","type":"exact"},{"name":"upregulation of F-9775B synthesis","type":"exact"}],"termid":"GO:1900677"}


id: PBO:0087317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small-subunit processome protein involved in pre-18S rRNA maturation; part of a subunit of the 90S preribosomal particle capable of interacting directly with the 5' ETS of the 35S pre-rRNA; contains WD40 repeats","termid":"PBO:0087317"}


id: MONDO:0060596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies and distal limb anomalies","secondary_identifiers":["OMIM:617755","UMLS:C4540327","MEDGEN:1627464","DOID:0070514","GARD:18513"],"synonyms":[{"name":"NEDDFL","type":"related"},{"name":"neurodevelopmental disorder with dysmorphic facies and distal limb anomalies","type":"exact"}],"termid":"MONDO:0060596","xrefs":{"Monarch":{"xref_id":"0060596"}}}


id: MONDO:0859171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Luo-Schoch-Yamamoto syndrome","secondary_identifiers":["DOID:0070416","MEDGEN:1794156","OMIM:619460","UMLS:C5561946"],"termid":"MONDO:0859171","xrefs":{"Monarch":{"xref_id":"0859171"}}}


id: FYPO:0002459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, branched, septated, and elongated.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"branched, elongated, septated cell","termid":"FYPO:0004594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"viable branched, elongated vegetative cell","secondary_identifiers":["FYPO:0002458"],"synonyms":[{"name":"viable branched cell during vegetative growth","type":"exact"},{"name":"viable branched elongated vegetative cell","type":"exact"},{"name":"viable branched vegetative cell","type":"exact"},{"name":"viable branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, elongated cell during vegetative growth","type":"exact"},{"name":"viable branched, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, elongated, septated cell","type":"exact"},{"name":"viable branched, long, septated cell","type":"exact"},{"name":"viable branched, septated cell","type":"exact"},{"name":"viable elongated branched cell","type":"exact"}],"termid":"FYPO:0002459"}


id: GO:0043918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cadaverine + S-adenosyl 3-(methylsulfanyl)propylamine = aminopropylcadaverine + H+ + S-methyl-5'-thioadenosine.","definition_xrefs":["RHEA:33387","PMID:17545282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"cadaverine aminopropyltransferase activity","synonyms":[{"name":"cadaverine aminopropyl transferase activity","type":"exact"}],"termid":"GO:0043918"}


id: MONDO:0033542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 70","secondary_identifiers":["OMIM:618969","MEDGEN:1740270","DOID:0112005","UMLS:C5436501"],"synonyms":[{"name":"IMD70","type":"related"},{"name":"IMMUNODEFICIENCY 70","type":"related"}],"termid":"MONDO:0033542","xrefs":{"Monarch":{"xref_id":"0033542"}}}


id: GO:0030114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A slime layer is an easily removed, diffuse, unorganized layer of extracellular material that surrounds a cell. Specifically this consists mostly of exopolysaccharides, glycoproteins, and glycolipids.","definition_xrefs":["Wikipedia:Slime_layer","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"slime layer","termid":"GO:0030114"}


id: PBO:0081093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 20 pseudogene 2","termid":"PBO:0081093"}


id: PBO:0089142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain Sre1 cleavage protein","termid":"PBO:0089142"}


id: PR:Q1MTQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- brl1 gene.","definition_xrefs":["UniProtKB:Q1MTQ0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase brl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.15","synonyms":[{"name":"BRE1-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RING finger protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-brl1","type":"exact"}],"termid":"PR:Q1MTQ0"}


id: GO:0014891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in striated muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle adaptation","termid":"GO:0014888"},{"relation_name":"is_a","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle atrophy","termid":"GO:0014891"}


id: PBO:0065509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and serine rich coiled-coil 1","termid":"PBO:0065509"}


id: FYPO:0001342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects a response to a stimulus in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"cellular response phenotype during vegetative growth","synonyms":[{"name":"cellular response phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular response phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0001342"}


id: MONDO:0017738
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84758,84757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"lysosomal glycogen storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681077","GARD:21333","MEDGEN:1842699","Orphanet:309337","ICD10CM:E74.0"],"termid":"MONDO:0017738","terms_by_termid":{"MONDO:0009290":null},"xrefs":{"Monarch":{"xref_id":"0017738"}}}


id: PBO:0069364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 624, pseudogene","termid":"PBO:0069364"}


id: PBO:0064609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 4 homeobox 3","termid":"PBO:0064609"}


id: GO:0046554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + NADP+ = oxaloacetate + NADPH + H+.","definition_xrefs":["RHEA:10824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-malate dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.82","KEGG_REACTION:R00343","MetaCyc:MALATE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"(S)-malate:NADP+ oxidoreductase activity","type":"related"},{"name":"NADP malate dehydrogenase activity","type":"related"},{"name":"NADP-linked malate dehydrogenase activity","type":"related"},{"name":"NADP-malate dehydrogenase activity","type":"related"},{"name":"malate NADP dehydrogenase activity","type":"related"},{"name":"malic dehydrogenase (nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0046554"}


id: GO:0015751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which arabinose, a pentose monosaccharide that occurs in both D and L configurations, is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"arabinose transmembrane transport","synonyms":[{"name":"arabinose transport","type":"related"}],"termid":"GO:0015751"}


id: GO:0004980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with melanocyte-stimulating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:jl","PMID:7581459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor activity","termid":"GO:0004977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"melanocyte-stimulating hormone receptor activity","synonyms":[{"name":"MSH receptor activity","type":"broad"},{"name":"MSHR activity","type":"broad"},{"name":"melanocyte stimulating hormone receptor activity","type":"exact"},{"name":"melanophore-stimulating hormone receptor activity","type":"exact"}],"termid":"GO:0004980"}


id: MONDO:0003168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO Grade 1 astrocytoma which arises in the cerebellum. The tumor is composed of spindle shaped cells with numerous collections of reddish astrocytic fibers called Rosenthal fibers. Over 80% or the cerebellar astrocytomas of childhood are pilocytic. Pilocytic astrocytomas may rarely occur in adults. They are usually treated by surgical resection and in most cases have a favorable prognosis.","definition_xrefs":["NCIT:C6809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign glioma","termid":"MONDO:0000638"},{"relation_name":"is_a","term_name":"cerebellar astrocytoma","termid":"MONDO:0003165"},{"relation_name":"is_a","term_name":"pilocytic astrocytoma","termid":"MONDO:0016691"},{"relation_name":"is_a","term_name":"benign neoplasm of cerebellum","termid":"MONDO:0021499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar pilocytic astrocytoma","secondary_identifiers":["MEDGEN:91158","SCTID:277507004","UMLS:C0349620","DOID:4853"],"synonyms":[{"name":"cerebellar pilocytic astrocytoma","type":"exact"},{"name":"cerebellum pilocytic astrocytoma","type":"exact"},{"name":"pilocytic astrocytoma of cerebellum","type":"exact"},{"name":"pilocytic astrocytoma of the cerebellum","type":"exact"}],"termid":"MONDO:0003168","xrefs":{"Monarch":{"xref_id":"0003168"}}}


id: PBO:0112881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial alpha-ketoglutarate dehydrogenase adaptor subunit Ymr31/Kgd4","termid":"PBO:0112881"}


id: GO:0005833
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"hemoglobin complex","synonyms":[{"name":"haemoglobin complex","type":"exact"}],"termid":"GO:0005833"}


id: MONDO:0011644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disorder of the cilliary body in the uvea that affects healthy, younger individuals who are often asymptomatic. It has a long clinical course with relapses and remissions. Symptoms include mildly decreased vision and floaters. It may be associated with autoimmune disorders.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary body disorder","termid":"MONDO:0002970"},{"relation_name":"is_a","term_name":"chorioretinitis","termid":"MONDO:0004674"},{"relation_name":"is_a","term_name":"intermediate uveitis","termid":"MONDO:0006806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pars planitis","secondary_identifiers":["GARD:7339","icd11.foundation:127977237","MEDGEN:14623","DOID:12731","MedDRA:10034052","MESH:D015868","OMIM:606177","SCTID:314428001","UMLS:C0030593","NCIT:C34903","EFO:1001088","ICD9:363.21"],"synonyms":[{"name":"familial pars planitis (subtype)","type":"related"},{"name":"inflammation of pars plana of ciliary body","type":"exact"},{"name":"pars plana of ciliary body inflammation","type":"exact"},{"name":"pars plana of ciliary bodyitis","type":"exact"},{"name":"pars planitis","type":"exact"},{"name":"peripheral retinal inflammation","type":"related"},{"name":"posterior cyclitis","type":"exact"}],"termid":"MONDO:0011644","xrefs":{"Monarch":{"xref_id":"0011644"}}}


id: GO:1903605
data:
  {"annotated_genes":["SJAG_04008","SJAG_03199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93945,106944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903607"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a cytochrome.","definition_xrefs":["PMID:19721088","GOC:dph","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"cytochrome metabolic process","termid":"GO:1903604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytochrome biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome anabolism","type":"exact"},{"name":"cytochrome biosynthesis","type":"exact"},{"name":"cytochrome formation","type":"exact"},{"name":"cytochrome synthesis","type":"exact"}],"termid":"GO:1903605","terms_by_termid":{"GO:1903607":null}}


id: PBO:0085973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; predicted to encode a pyridoxal 5'-phosphate synthase based on sequence similarity but purified protein does not possess this activity, nor does it bind flavin mononucleotide (FMN); null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2; YLR456W has a paralog, YPR172W, that arose from the whole genome duplication","termid":"PBO:0085973"}


id: FYPO:0002984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methyl methanesulfonate is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal RNA accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"normal RNA level during cellular response to MMS","type":"exact"},{"name":"normal RNA level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to methyl methanesulphonate","type":"exact"},{"name":"normal mRNA level during cellular response to methyl methanesulfonate","type":"narrow"},{"name":"normal transcript level during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002984"}


id: GO:0033492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving esculetin, 6,7-dihydroxycoumarin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin metabolic process","termid":"GO:0009804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"esculetin metabolic process","synonyms":[{"name":"esculetin metabolism","type":"exact"}],"termid":"GO:0033492"}


id: PR:O94311
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC215.06c gene.","definition_xrefs":["UniProtKB:O94311","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0743 protein C215.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.06c","synonyms":[{"name":"Spom972h-SPBC215.06c","type":"exact"}],"termid":"PR:O94311"}


id: PBO:0004712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel2 interacting protein Tti2, predicted ASTRA complex subunit","termid":"PBO:0004712"}


id: PBO:0083988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutaredoxin that employs a dithiol mechanism of catalysis; monomeric; activity is low and null mutation does not affect sensitivity to oxidative stress; GFP-fusion protein localizes to the cytoplasm; expression strongly induced by arsenic","termid":"PBO:0083988"}


id: PBO:0047080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM135A antisense RNA 1","termid":"PBO:0047080"}


id: MONDO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of pneumoconiosis caused by long standing exposure to barium dust. It is characterized by the formation of fine dense lesions in the lung parenchyma. The lesions do not affect the lung function and disappear without treatment after the exposure to barium dust stops.","definition_xrefs":["NCIT:C34410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baritosis","secondary_identifiers":["DOID:10321","SCTID:50076003","UMLS:C0340177","GARD:8371","ICD9:503","MEDGEN:87399","MESH:C537080"],"synonyms":[{"name":"deposition of barium in the lungs","type":"related"},{"name":"inhalation of barytes","type":"related"}],"termid":"MONDO:0001001","xrefs":{"Monarch":{"xref_id":"0001001"}}}


id: PATO:0001983
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's two basal lobes being united together.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perfoliate","termid":"PATO:0001983"}


id: FYPO:0004760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which azygotic asci that contain more than four, and up to eight, spores form following conjugation, diploid growth, and subsequent azygotic sporulation. Azygotic ascus formation occurs when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of azygotic ascus with more or fewer than four spores","termid":"FYPO:0001893"},{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with more than four spores","termid":"FYPO:0003263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000121","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of azygotic ascus with more than four spores","synonyms":[{"name":"8-spored azygotic asci","type":"related"},{"name":"abnormal azygotic ascospore formation resulting in formation of asci with more than four spores","type":"exact"},{"name":"abnormal sporulation resulting in formation of azygotic asci with more than four spores","type":"exact"},{"name":"azygotic asci with increased number of spores","type":"exact"},{"name":"eight-spored azygotic asci","type":"related"}],"termid":"FYPO:0004760"}


id: MOD:01862
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the hydrogen atom of a cysteine sulfanyl group with a substituted sulfanyl group, forming a disulfide bond that does not cross-link two encoded peptide chains.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolated residue","termid":"MOD:01886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disulfide conjugated residue","synonyms":[{"name":"S-thiolation","type":"exact"}],"termid":"MOD:01862"}


id: GO:1900527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of nucleus size that is involved in G1 to G0 transition.","definition_xrefs":["PMID:19366728","GOC:al","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nucleus size involved in G1 to G0 transition (obsolete GO:1900527)","synonyms":[{"name":"regulation of nuclear size involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nuclear size involved in G1/G0 transition","type":"exact"},{"name":"regulation of nuclear size involved in cell cycle quiescence","type":"related"},{"name":"regulation of nuclear size involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nuclear size involved in stationary phase","type":"related"},{"name":"regulation of nuclear volume involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nuclear volume involved in G1/G0 transition","type":"exact"},{"name":"regulation of nuclear volume involved in cell cycle quiescence","type":"related"},{"name":"regulation of nuclear volume involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nuclear volume involved in stationary phase","type":"related"},{"name":"regulation of nucleus size involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nucleus size involved in G1/G0 transition","type":"exact"},{"name":"regulation of nucleus size involved in cell cycle quiescence","type":"related"},{"name":"regulation of nucleus size involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nucleus size involved in stationary phase","type":"related"}],"termid":"GO:1900527"}


