# terms

id: PBO:0085337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoglucomutase; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; functions as the acceptor for a Glc-phosphotransferase; protein abundance increases in response to DNA replication stress; PGM2 has a paralog, PGM1, that arose from the whole genome duplication","termid":"PBO:0085337"}


id: GO:0080025
data:
  {"annotated_genes":["SJAG_00115","SJAG_00152","SJAG_01783","SJAG_04963"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97109,98113,98828,99779],"is_not":false,"summary":null,"term":"GO:0080025"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-3,5-bisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3' and 5' positions.","definition_xrefs":["PMID:18397324","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"phosphatidylinositol bisphosphate binding","termid":"GO:1902936"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00152":null,"SJAG_01783":null,"SJAG_04963":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol-3,5-bisphosphate binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PtdIns(3,5)P2 binding","type":"exact"}],"termid":"GO:0080025","terms_by_termid":{"GO:0080025":null}}


id: PBO:0046863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 2A","termid":"PBO:0046863"}


id: PBO:0109828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone, AAA family ATPase Rvb1","termid":"PBO:0109828"}


id: PBO:0111911
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-AN1 type","termid":"PBO:0111911"}


id: PBO:0039376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomotin like 1","termid":"PBO:0039376"}


id: PBO:0044722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 9 (pseudogene)","termid":"PBO:0044722"}


id: PBO:0074806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13 pseudogene 1","termid":"PBO:0074806"}


id: GO:1901267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cephalosporin C.","definition_xrefs":["UniPathway:UPA00172","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"cephalosporin C metabolic process","termid":"GO:1901266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"cephalosporin C catabolic process","synonyms":[{"name":"cephalosporin C breakdown","type":"exact"},{"name":"cephalosporin C catabolism","type":"exact"},{"name":"cephalosporin C degradation","type":"exact"}],"termid":"GO:1901267"}


id: PR:O60092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC14C8.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C8.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.11c","synonyms":[{"name":"Spom972h-SPBC14C8.11c","type":"exact"}],"termid":"PR:O60092"}


id: MONDO:0000724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A language disorder characterized by difficulty in language acquisition despite otherwise normal development and in the absence of any obvious explanatory factors.","definition_xrefs":["DOID:0060244","PMID:19646677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"language disorder","termid":"MONDO:0004750"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific language impairment","secondary_identifiers":["OMIMPS:606711","Orphanet:458713","EFO:1001510","UMLS:C0454651","MEDGEN:627772"],"synonyms":[{"name":"language impairment (disease)","type":"exact"}],"termid":"MONDO:0000724","xrefs":{"Monarch":{"xref_id":"0000724"}}}


id: GO:0060543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:elh","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of strand invasion","termid":"GO:0060542"},{"relation_name":"negatively_regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"negative regulation of strand invasion","synonyms":[{"name":"negative regulation of D-loop biosynthesis","type":"related"},{"name":"negative regulation of D-loop formation","type":"related"},{"name":"negative regulation of Rad51-mediated strand invasion","type":"exact"}],"termid":"GO:0060543"}


id: PBO:0113119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsin-like protein required for endocytosis and actin patch assembly; K48-, K63-specific Ub chain binding protein that functions as an endocytic adaptor; contains clathrin-binding motif at C-terminus; functionally redundant with Ent1p; ENT2 has a paralog, ENT1, that arose from the whole genome duplication","termid":"PBO:0113119"}


id: PBO:0071774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 2","termid":"PBO:0071774"}


id: PBO:0018105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad16 homolog ATP-dependent DNA helicase/ ubiquitin protein ligase E3 Rhp16","termid":"PBO:0018105"}


id: GO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the instar larva or pupa over time, from its formation to the mature structure. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"instar larval or pupal development","termid":"GO:0002165"}


id: PBO:0035851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035851"}


id: MONDO:0016830
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85412,85411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"}]},"cv_name":"mondo","definition":"Emery-Dreifuss muscular dystrophy (EDMD) is characterized by muscular weakness and atrophy, with early joint contractures and cardiomyopathy.","definition_xrefs":["Orphanet:261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D020389","NORD:1084","NANDO:1200492","MEDGEN:96078","NCIT:C84685","OMIMPS:310300","UMLS:C0410189","DOID:11726","NANDO:2200857","SCTID:111508004","GARD:6329","icd11.foundation:749295636"],"synonyms":[{"name":"EDMD","type":"exact"},{"name":"Emery Dreifuss Muscular Dystrophy","type":"exact"},{"name":"Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"Humeroperoneal neuromuscular disease, (formerly)","type":"related"},{"name":"scapuloperoneal syndrome, X-linked (formerly)","type":"related"}],"termid":"MONDO:0016830","terms_by_termid":{"MONDO:0008409":null},"xrefs":{"Monarch":{"xref_id":"0016830"}}}


id: PBO:0036000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_medial_cortical_node_condensation","termid":"PBO:0036000"}


id: MOD:01713
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance acyloxy groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent O-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01713"}


id: PBO:0042520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 1","termid":"PBO:0042520"}


id: PBO:0087337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of cargo proteins at the multivesicular body; identified as a high-copy suppressor of a SHR3 deletion, increasing steady-state levels of amino acid permeases","termid":"PBO:0087337"}


id: PBO:0050636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSFY1 pseudogene 1","termid":"PBO:0050636"}


id: PBO:0027199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_orientation_correction","termid":"PBO:0027199"}


id: PBO:0048832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma transducin 2","termid":"PBO:0048832"}


id: MONDO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tularemia that results in bacteremia and has symptom fever, has symptom chills, has symptom myalgia, has symptom malaise, and has symptom weight loss.","definition_xrefs":["DOID:0050383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tularemia","termid":"MONDO:0018077"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"typhoidal tularemia","secondary_identifiers":["UMLS:C0473876","SCTID:398554008","MEDGEN:633510"],"termid":"MONDO:0000321","xrefs":{"Monarch":{"xref_id":"0000321"}}}


id: PBO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease kappa ortholog (predicted)","termid":"PBO:0002298"}


id: GO:0060290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a differentiated cell of one fate into a differentiated cell of another fate without first undergoing cell division or reversion to a more primitive or stem cell-like fate.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transdifferentiation","secondary_identifiers":["Wikipedia:Transdifferentiation"],"termid":"GO:0060290"}


id: GO:0061065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dauer larval development","termid":"GO:0061065"}


id: MONDO:0020141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious disease with dementia (obsolete MONDO:0020141)","secondary_identifiers":["Orphanet:98542"],"termid":"MONDO:0020141","xrefs":{"Monarch":{"xref_id":"0020141"}}}


id: MONDO:0017939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiminicore myopathy","termid":"MONDO:0018948"},{"relation_name":"is_a","term_name":"autosomal recessive titinopathy","termid":"MONDO:0100493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"classic multiminicore myopathy","secondary_identifiers":["GARD:13661","HP:0003789","UMLS:C5679883","MEDGEN:1826166","Orphanet:324604"],"synonyms":[{"name":"classic MmD","type":"broad"},{"name":"classic multiminicore disease","type":"broad"},{"name":"classic multiminicore myopathy","type":"exact"},{"name":"minicore myopathy","type":"related"}],"termid":"MONDO:0017939","xrefs":{"Monarch":{"xref_id":"0017939"}}}


id: PBO:0016539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seipin homolog, involved in lipid catabolism (predicted)","termid":"PBO:0016539"}


id: PBO:0001358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Rho5","termid":"PBO:0001358"}


id: GO:0098517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which low humidity is detected and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of low humidity","termid":"GO:0098517"}


id: MONDO:0006617
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"Skin diseases characterized by local or general distributions of blisters. They are classified according to the site and mode of blister formation. Lesions can appear spontaneously or be precipitated by infection, trauma, or sunlight. Etiologies include immunologic and genetic factors. (From Scientific American Medicine, 1990)","definition_xrefs":["MESH:D012872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vesiculobullous skin disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:20778","UMLS:C0037275","EFO:1000774","DOID:2731"],"synonyms":[{"name":"Sneddon Wilkinson disease","type":"narrow"},{"name":"Sneddon-Wilkinson disease","type":"narrow"},{"name":"bullous dermatoses","type":"related"},{"name":"bullous skin disease","type":"related"},{"name":"bullous skin diseases","type":"related"},{"name":"dermatoses, bullous","type":"related"},{"name":"dermatoses, subcorneal pustular","type":"related"},{"name":"dermatoses, vesiculobullous","type":"related"},{"name":"dermatosis, subcorneal pustular","type":"related"},{"name":"pustular dermatoses, subcorneal","type":"related"},{"name":"pustular dermatosis, subcorneal","type":"related"},{"name":"skin disease, bullous","type":"related"},{"name":"skin disease, vesicular","type":"related"},{"name":"skin disease, vesiculobullous","type":"related"},{"name":"skin diseases, bullous","type":"related"},{"name":"skin diseases, vesicular","type":"narrow"},{"name":"subcorneal pustular dermatoses","type":"narrow"},{"name":"subcorneal pustular dermatosis","type":"narrow"},{"name":"vesicular skin disease","type":"related"},{"name":"vesicular skin diseases","type":"related"},{"name":"vesiculobullous dermatoses","type":"related"},{"name":"vesiculobullous skin disease","type":"exact"},{"name":"vesiculobullous skin diseases","type":"related"}],"termid":"MONDO:0006617","terms_by_termid":{"MONDO:0008218":null},"xrefs":{"Monarch":{"xref_id":"0006617"}}}


id: PBO:0070592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 58","termid":"PBO:0070592"}


id: GO:0048473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-methionine is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["PMID:12169620","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"methionine transport","termid":"GO:0015821"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"D-methionine transmembrane transport","termid":"GO:0048473"}


id: GO:0071617
data:
  {"annotated_genes":["SJAG_01957","SJAG_04323","SJAG_04041","SJAG_04792"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89545,103463,90687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003841"},{"annotations":[99248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042171"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of acyl groups from an acyl-CoA to a lysophospholipid.","definition_xrefs":["GOC:cjk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01957":null,"SJAG_04041":null,"SJAG_04323":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"lysophospholipid acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071617","terms_by_termid":{"GO:0003841":null,"GO:0042171":null}}


id: MONDO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aortic disease that is characterized by an absence of an opening from the left ventricle of the heart into the aorta.","definition_xrefs":["DOID:14037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aorta atresia","secondary_identifiers":["ICD10CM:Q25.2","ICD9:747.22","UMLS:C0345010","MEDGEN:576689","SCTID:204431007"],"synonyms":[{"name":"atresia and stenosis of aorta","type":"exact"},{"name":"congenital atresia and stenosis of aorta","type":"exact"}],"termid":"MONDO:0001863","xrefs":{"Monarch":{"xref_id":"0001863"}}}


id: PBO:0072561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS related","termid":"PBO:0072561"}


id: PBO:0082175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor; GTPase of the Ras superfamily involved in regulation of coated vesicle formation in intracellular trafficking within the Golgi; involved in mitochondrial morphology; ARF1 has a paralog, ARF2, that arose from the whole genome duplication; arf1 arf2 double null mutation is complemented by human ARF1, ARF4, ARF5, or ARF6","termid":"PBO:0082175"}


id: GO:0140619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases a DNA strand exchange activity.","definition_xrefs":["PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"DNA strand exchange activator activity","termid":"GO:0140619"}


id: PBO:0045383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP4 divergent transcript","termid":"PBO:0045383"}


id: MONDO:0005499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant glioma that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain glioma","secondary_identifiers":["UMLS:C0349661","MEDGEN:91163","DOID:0060108","SCTID:254937005"],"synonyms":[{"name":"brain malignant glioma","type":"exact"},{"name":"malignant glioma of brain","type":"exact"}],"termid":"MONDO:0005499","xrefs":{"Monarch":{"xref_id":"0005499"}}}


id: GO:1904257
data:
  {"annotated_genes":["SJAG_03528","SJAG_00328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89965,103797],"is_not":false,"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol across the Golgi membrane into the Golgi lumen.","definition_xrefs":["GOC:TermGenie","PMID:25732056","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"},{"relation_name":"is_a","term_name":"cytosol to Golgi apparatus transport","termid":"GO:0140820"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_03528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"zinc ion import into Golgi lumen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytosol to Golgi apparatus zinc transport","type":"exact"},{"name":"zinc II ion import across Golgi membrane","type":"exact"},{"name":"zinc ion import across Golgi membrane","type":"exact"},{"name":"zinc ion import into Golgi apparatus","type":"exact"},{"name":"zinc ion import into Golgi membrane","type":"related"},{"name":"zinc(2+) import across Golgi membrane","type":"exact"}],"termid":"GO:1904257","terms_by_termid":{"GO:1904257":null}}


id: PBO:0053839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1104","termid":"PBO:0053839"}


id: FYPO:0000180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which a cellular response to oxidative stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress","termid":"FYPO:0000162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cellular response to oxidative stress","synonyms":[{"name":"abnormal oxidative stress response","type":"exact"}],"termid":"FYPO:0000180"}


id: GO:1904095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endosperm development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25194028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of endosperm development","termid":"GO:2000014"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"endosperm development","termid":"GO:0009960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endosperm development","synonyms":[{"name":"down regulation of endosperm development","type":"exact"},{"name":"down-regulation of endosperm development","type":"exact"},{"name":"downregulation of endosperm development","type":"exact"},{"name":"inhibition of endosperm development","type":"narrow"}],"termid":"GO:1904095"}


id: MONDO:0006614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign, chronic disease characterized by sterile pustular eruption, typically involving the flexural sites of the trunk and proximal extremities.","definition_xrefs":["Orphanet:48377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"subcorneal pustular dermatosis","secondary_identifiers":["MEDGEN:108687","GARD:13606","DOID:8508","icd11.foundation:1952122675","ICD9:694.1","MedDRA:10042342","MESH:D012872","EFO:1000771","SCTID:25147002","UMLS:C0600336"],"synonyms":[{"name":"Sneddon-Wilkinson disease","type":"exact"},{"name":"Sneddon-Wilkinson disease or syndrome","type":"exact"},{"name":"pustulosis subcornealis","type":"exact"},{"name":"subcorneal pustular dermatitis","type":"exact"},{"name":"subcorneal pustular dermatosis","type":"exact"}],"termid":"MONDO:0006614","xrefs":{"Monarch":{"xref_id":"0006614"}}}


id: MONDO:0021542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of choroid","termid":"MONDO:0021487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hemangioma of choroid","secondary_identifiers":["NCIT:C4562","ICD9:228.09","SCTID:255022003","UMLS:C0346390","MEDGEN:83424"],"synonyms":[{"name":"angioma of choroid","type":"exact"},{"name":"angioma of the choroid","type":"exact"},{"name":"benign angioma of choroid","type":"exact"},{"name":"benign angioma of the choroid","type":"exact"},{"name":"benign choroid angioma","type":"exact"},{"name":"benign choroid hemangioma","type":"exact"},{"name":"benign hemangioma of choroid","type":"exact"},{"name":"benign hemangioma of the choroid","type":"exact"},{"name":"choroid angioma","type":"exact"},{"name":"choroid hemangioma","type":"exact"},{"name":"hemangioma of optic choroid","type":"exact"},{"name":"hemangioma of the choroid","type":"exact"},{"name":"hemangioma, choroid, benign","type":"exact"},{"name":"optic choroid hemangioma","type":"exact"}],"termid":"MONDO:0021542","xrefs":{"Monarch":{"xref_id":"0021542"}}}


id: SO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal locus where complementary lncRNA and associated proteins accumulate at the corresponding lncRNA gene loci to tether homologous chromosome during chromosome pairing at meiosis I.","definition_xrefs":["PMID:31811152","PMID:22582262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"},{"relation_name":"member_of","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous_chromosome_recognition_and_pairing_locus","synonyms":[{"name":"homologous chromosome recognition and pairing locus","type":"exact"}],"termid":"SO:0002233"}


id: PBO:0000370
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses str3","termid":"PBO:0000370"}


id: GO:0048631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle growth.","definition_xrefs":["PMID:15726494","PMID:15907921","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"skeletal muscle tissue growth","termid":"GO:0048630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue growth","termid":"GO:0048631"}


id: PR:P32747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydroorotate dehydrogenase (quinone), mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00561","PRO:DNx","PANTHER:PTHR11938:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone), mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.12c","secondary_identifiers":["UniProtKB:P32747"],"synonyms":[{"name":"DHOD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DHODase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DHOdehase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DHODH","type":"exact"},{"name":"dihydroorotate oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32747"}


id: GO:0001772
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction.","definition_xrefs":["PMID:11244041","PMID:11376300","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"immunological synapse","secondary_identifiers":["Wikipedia:Immunological_synapse"],"synonyms":[{"name":"c-SMAC","type":"narrow"},{"name":"supramolecular activation cluster","type":"exact"}],"termid":"GO:0001772"}


id: PBO:0038858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTSL4 antisense RNA 1","termid":"PBO:0038858"}


id: PBO:0038354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_effector_activity","termid":"PBO:0038354"}


id: GO:0050212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + progesterone = 11alpha-hydroxyprogesterone + A + H2O.","definition_xrefs":["RHEA:18205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progesterone monooxygenase activity","termid":"GO:0050214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"progesterone 11-alpha-monooxygenase activity","secondary_identifiers":["MetaCyc:PROGESTERONE-11-ALPHA-MONOOXYGENASE-RXN","EC:1.14.99.14","KEGG_REACTION:R02214"],"synonyms":[{"name":"progesterone 11-alpha-hydroxylase activity","type":"related"},{"name":"progesterone 11a-monooxygenase activity","type":"exact"},{"name":"progesterone 11alpha-hydroxylase activity","type":"related"},{"name":"progesterone 11alpha-monooxygenase activity","type":"related"},{"name":"progesterone,hydrogen-donor:oxygen oxidoreductase (11alpha-hydroxylating)","type":"related"}],"termid":"GO:0050212"}


id: PBO:0064791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1K","termid":"PBO:0064791"}


id: GO:0015950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine nucleotide is synthesized from another purine nucleotide.","definition_xrefs":["GOC:mah","ISBN:0306444747","ISBN:0471394831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleotide interconversion","termid":"GO:0015950"}


id: PBO:0069470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 737, pseudogene","termid":"PBO:0069470"}


id: PBO:0073795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 2","termid":"PBO:0073795"}


id: PBO:0027198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubule_formation_from_nuclear_microtubules","termid":"PBO:0027198"}


id: MONDO:0001651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare squamous cell carcinoma that arises from the scrotum. It has been associated with exposure to environmental and industrial carcinogens. The prognosis depends on the extent of lymph node involvement.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scrotal carcinoma","termid":"MONDO:0002650"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"scrotum squamous cell carcinoma","secondary_identifiers":["DOID:13159","NCIT:C4643","SCTID:276860003","MEDGEN:138101","UMLS:C0349551"],"synonyms":[{"name":"scrotal squamous cell carcinoma","type":"exact"},{"name":"scrotum squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of scrotum","type":"related"},{"name":"squamous cell carcinoma of the scrotum","type":"exact"}],"termid":"MONDO:0001651","xrefs":{"Monarch":{"xref_id":"0001651"}}}


id: GO:0008120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acylsphing-4-enine + UDP-alpha-D-glucose = a beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine + H+ + UDP.","definition_xrefs":["RHEA:12088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ceramide glucosyltransferase activity","secondary_identifiers":["EC:2.4.1.80","MetaCyc:CERAMIDE-GLUCOSYLTRANSFERASE-RXN","Reactome:R-HSA-1638104"],"synonyms":[{"name":"UDP-glucose-ceramide glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-acylsphingosine D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:ceramide glucosyltransferase activity","type":"related"},{"name":"UDPglucose:N-acylsphingosine D-glucosyltransferase activity","type":"related"},{"name":"ceramide:UDP-glucose glucosyltransferase activity","type":"related"},{"name":"ceramide:UDPGlc glucosyltransferase activity","type":"related"},{"name":"glucosylceramide synthase activity","type":"related"},{"name":"uridine diphosphoglucose-ceramide glucosyltransferase activity","type":"related"}],"termid":"GO:0008120"}


id: PBO:0069193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 447, pseudogene","termid":"PBO:0069193"}


id: MONDO:0020432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectasia of the right atrial appendage is a rare cardiac malformation characterized by the enlargement of the right auricle without any other associated cardiac lesions. It can be asymptomatic and diagnosed fortuitously, prenatally or during routine clinical examinations or it can present with heart murmur, palpitation, atrial arrhythmia, fatigue, dyspnea or respiratory distress.","definition_xrefs":["Orphanet:99101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectasia of the right atrial appendage","secondary_identifiers":["MEDGEN:1661316","GARD:19649","UMLS:C4749283"],"synonyms":[{"name":"dilatation of the right atrial appendage","type":"exact"},{"name":"dilatation of the right atrial auricle","type":"exact"},{"name":"ectasia of the right atrial auricle","type":"exact"}],"termid":"MONDO:0020432","xrefs":{"Monarch":{"xref_id":"0020432"}}}


id: GO:0016268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc or Core 1) to form the core 2 O-glycan structure, GlcNAc-beta-(1->6)[Gal-beta-(1->3)]-GalNAc.","definition_xrefs":["PMID:33775405","GOC:mah","GOC:pr","PMID:10580130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"core 2 O-glycan biosynthetic process","synonyms":[{"name":"O-glycan processing, core 2","type":"exact"},{"name":"core 2 O-glycan biosynthesis","type":"exact"}],"termid":"GO:0016268"}


id: PBO:0067427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 546, pseudogene","termid":"PBO:0067427"}


id: PBO:0015254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 ubiquitin-like conjugating enzyme Atg7","termid":"PBO:0015254"}


id: MONDO:0000960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetic angiopathy is a form of angiopathy associated with diabetic complications.","definition_xrefs":["Wikipedia:Diabetic_angiopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vascular disease","termid":"MONDO:0005294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetic peripheral angiopathy","secondary_identifiers":["NCIT:C35610","SCTID:127014009","UMLS:C0011871","MESH:D003925","DOID:11713","ICD9:443.81","EFO:1000896","ICD9:250.7","DOID:10182","MEDGEN:507633"],"synonyms":[{"name":"diabetic angiopathy","type":"exact"},{"name":"diabetic vascular disorder","type":"exact"}],"termid":"MONDO:0000960","xrefs":{"Monarch":{"xref_id":"0000960"}}}


id: PBO:0052382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF23 and PAQR5 antisense RNA 1","termid":"PBO:0052382"}


id: PBO:0053831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1096","termid":"PBO:0053831"}


id: PBO:0086482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative neutral trehalase, required for thermotolerance; may mediate resistance to other cellular stresses; NTH2 has a paralog, NTH1, that arose from the whole genome duplication","termid":"PBO:0086482"}


id: GO:0042723
data:
  {"annotated_genes":["SJAG_02406","SJAG_03362","SJAG_04866","SJAG_02047","SJAG_03538","SJAG_02421","SJAG_04282","SJAG_01742","SJAG_01970","SJAG_04067","SJAG_00381","SJAG_00827","SJAG_02420"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88551,113123],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[113036,99023,93798,106843,113449,113030,115464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[93799,99024,113031,115465,113450,113037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[65707,99025,58608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[109900,109901,99026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiamine (vitamin B1), and compounds derived from it.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0006766"],"is_obsolete":false,"name":"thiamine-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-196819"],"synonyms":[{"name":"thiamin and derivative metabolic process","type":"exact"},{"name":"thiamin and derivative metabolism","type":"exact"},{"name":"thiamin-containing compound metabolic process","type":"exact"},{"name":"thiamine and derivative metabolic process","type":"exact"},{"name":"thiamine and derivative metabolism","type":"exact"},{"name":"thiamine-containing compound metabolism","type":"exact"},{"name":"vitamin B1 and derivative metabolic process","type":"exact"},{"name":"vitamin B1 and derivative metabolism","type":"exact"}],"termid":"GO:0042723","terms_by_termid":{"GO:0006772":null,"GO:0009228":null,"GO:0009229":null,"GO:0036172":null,"GO:0090180":null}}


id: PBO:0064413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 6F","termid":"PBO:0064413"}


id: PBO:0063175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenazine biosynthesis like protein domain containing","termid":"PBO:0063175"}


id: PBO:0030646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_rate_at_high_pH","termid":"PBO:0030646"}


id: CHEBI:50398
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinamic acid","termid":"CHEBI:50398"}


id: MONDO:0004904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degeneration of macula and posterior pole","termid":"MONDO:0002175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"toxic maculopathy","secondary_identifiers":["ICD9:362.55","DOID:9867","SCTID:44115007","icd11.foundation:1889317154","MEDGEN:543164","UMLS:C0271086"],"synonyms":[{"name":"toxic maculopathy of retina","type":"exact"}],"termid":"MONDO:0004904","xrefs":{"Monarch":{"xref_id":"0004904"}}}


id: PBO:0062729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 3 pseudogene","termid":"PBO:0062729"}


id: PBO:0005869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide Mi","termid":"PBO:0005869"}


id: PBO:0038278
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eco_evidence","termid":"PBO:0038278"}


id: MONDO:0011966
data:
  {"annotated_genes":["SJAG_01025","SJAG_02160"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84570,84571],"is_not":false,"summary":null,"term":"MONDO:0011966"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"periventricular nodular heterotopia","termid":"MONDO:0020341"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01025":null,"SJAG_02160":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"periventricular heterotopia with microcephaly, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1842563","GARD:15424","OMIM:608097","MEDGEN:334110","MESH:C564292"],"synonyms":[{"name":"ARPHM","type":"related"},{"name":"heterotopia, periventricular, autosomal recessive","type":"related"},{"name":"periventricular heterotopia with microcephaly, autosomal recessive","type":"exact"},{"name":"periventricular nodular heterotopia 2","type":"related"}],"termid":"MONDO:0011966","terms_by_termid":{"MONDO:0011966":null},"xrefs":{"Monarch":{"xref_id":"0011966"}}}


id: PBO:0113232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP(+)-dependent serine dehydrogenase and carbonyl reductase; acts on serine, L-allo-threonine, and other 3-hydroxy acids; catalyzes the reduction of (S)-α-acetolactate to 2,3-dimethylglycerate; short-chain dehydrogenase/reductase (SDR) family member; GFP fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0113232"}


id: PBO:0048773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geminin DNA replication inhibitor","termid":"PBO:0048773"}


id: MONDO:0017071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myelomeningocele","termid":"MONDO:0019773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"thoracolumbosacral spina bifida cystica","secondary_identifiers":["GARD:20960","Orphanet:268752"],"termid":"MONDO:0017071","xrefs":{"Monarch":{"xref_id":"0017071"}}}


id: PBO:0051618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 2","termid":"PBO:0051618"}


id: PBO:0055385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2815","termid":"PBO:0055385"}


id: MONDO:0006652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myocardial infarction in which the anterior wall of the heart is involved. Anterior wall myocardial infarction is often caused by occlusion of the left anterior descending coronary artery. It can be categorized as anteroseptal or anterolateral wall myocardial infarction.","definition_xrefs":["MESH:D056988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"anterolateral myocardial infarction","secondary_identifiers":["DOID:5845","EFO:1000812","icd11.foundation:687792216","MedDRA:10068109","MEDGEN:78086","UMLS:C0262564"],"synonyms":[{"name":"acute anterior wall myocardial infarction","type":"related"},{"name":"anterolateral myocardial infarction","type":"exact"},{"name":"anterolateral myocardial infarctions","type":"related"},{"name":"anteroseptal myocardial infarction","type":"related"},{"name":"anteroseptal myocardial infarctions","type":"related"},{"name":"infarction, anterolateral myocardial","type":"related"},{"name":"infarction, anteroseptal myocardial","type":"related"},{"name":"infarctions, anterolateral myocardial","type":"related"},{"name":"infarctions, anteroseptal myocardial","type":"related"},{"name":"myocardial infarction, anterior wall","type":"related"},{"name":"myocardial infarction, anterolateral","type":"related"},{"name":"myocardial infarction, anteroseptal","type":"related"},{"name":"myocardial infarctions, anterolateral","type":"related"},{"name":"myocardial infarctions, anteroseptal","type":"related"}],"termid":"MONDO:0006652","xrefs":{"Monarch":{"xref_id":"0006652"}}}


id: PBO:0048602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone secretagogue receptor","termid":"PBO:0048602"}


id: GO:0043567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of insulin-like growth factor receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"insulin-like growth factor receptor signaling pathway","termid":"GO:0048009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of insulin-like growth factor receptor signaling pathway","synonyms":[{"name":"regulation of IGF receptor signaling pathway","type":"exact"},{"name":"regulation of IGF receptor signalling pathway","type":"exact"},{"name":"regulation of insulin-like growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0043567"}


id: GO:0043226
data:
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat family A member 2","termid":"PBO:0039452"}


id: PBO:0042204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin H","termid":"PBO:0042204"}


id: GO:0031395
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuropeptide hormone secreted by the central nervous system of insects that stimulates the tanning and sclerotization of the adult cuticle following eclosion. The active hormone consists of an obligate heterodimer of the alpha and beta subunits.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"bursicon neuropeptide hormone complex","termid":"GO:0031395"}


id: PBO:0003518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase (predicted)","termid":"PBO:0003518"}


id: PBO:0083174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF TRM5/YHR070W","termid":"PBO:0083174"}


id: GO:0006260
data:
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cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by the origin recognition complex, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. 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id: GO:0141087
data:
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id: PBO:0086715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutation results in impaired mitochondrial respiration","termid":"PBO:0086715"}


id: FYPO:0004459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more translation RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells) when the cell is subject to nitrogen starvation. Translation RNAs are transcribed from genes whose products are involved in translation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased level of translation gene mRNA during nitrogen starvation","synonyms":[{"name":"increased level of translation gene RNA during nitrogen starvation","type":"exact"},{"name":"increased level of translation gene mRNA during nitrogen depletion","type":"exact"},{"name":"increased level of translation gene mRNA during nitrogen deprivation","type":"exact"},{"name":"increased level of translation gene transcripts nitrogen starvation","type":"exact"},{"name":"increased translation gene mRNA accumulation during nitrogen starvation","type":"related"}],"termid":"FYPO:0004459"}


id: PBO:0051777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing with AAA domain 1 like","termid":"PBO:0051777"}


id: PBO:0109647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin gamma Y-linked (pseudogene)","termid":"PBO:0109647"}


id: PBO:0003964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triglyceride lipase-cholesterol esterase (predicted)","termid":"PBO:0003964"}


id: GO:0033781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + H+ + NADPH + O2 = (24S)-24-hydroxycholesterol + H2O + NADP+.","definition_xrefs":["RHEA:22716","EC:1.14.14.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholesterol 24-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07207","MetaCyc:1.14.13.98-RXN","Reactome:R-HSA-192061"],"synonyms":[{"name":"CYP46","type":"related"},{"name":"CYP46A1","type":"related"},{"name":"cholesterol 24-monooxygenase activity","type":"related"},{"name":"cholesterol 24S-hydroxylase activity","type":"related"},{"name":"cholesterol,NADPH:oxygen oxidoreductase (24-hydroxylating) activity","type":"related"},{"name":"cytochrome P450 46A1","type":"related"}],"termid":"GO:0033781"}


id: GO:0002728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of natural killer cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immunity","termid":"GO:0002716"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of natural killer cell cytokine production","termid":"GO:0002727"},{"relation_name":"negatively_regulates","term_name":"natural killer cell cytokine production","termid":"GO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell cytokine production","synonyms":[{"name":"down regulation of natural killer cell cytokine production","type":"exact"},{"name":"down-regulation of natural killer cell cytokine production","type":"exact"},{"name":"downregulation of natural killer cell cytokine production","type":"exact"},{"name":"inhibition of natural killer cell cytokine production","type":"narrow"},{"name":"negative regulation of NK cell cytokine production","type":"exact"}],"termid":"GO:0002728"}


id: GO:0102454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin + UDP-D-galactose = cyanidin 3-O-beta-D-galactoside betaine + UDP.","definition_xrefs":["RHEA:35631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-galactosyltransferase activity","secondary_identifiers":["EC:2.4.1.294","MetaCyc:RXN-13960"],"termid":"GO:0102454"}


id: PBO:0064501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit D","termid":"PBO:0064501"}


id: PBO:0041958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle and apoptosis regulator 2","termid":"PBO:0041958"}


id: PBO:0086994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reticulon protein; involved in nuclear pore assembly and maintenance of tubular ER morphology; promotes membrane curvature; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; increases tubular ER when overexpressed; mutants have reduced phosphatidylserine transfer between the ER and mitochondria; interacts with exocyst subunit Sec6p, Yip3p, and Sbh1p; member of the RTNLA subfamily","termid":"PBO:0086994"}


id: PBO:0034704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase Pis1","termid":"PBO:0034704"}


id: MONDO:0022805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colonic malakoplakia","secondary_identifiers":["UMLS:C0267536","MEDGEN:540762"],"termid":"MONDO:0022805","xrefs":{"Monarch":{"xref_id":"0022805"}}}


id: MONDO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breast adenosis characterized by the proliferation of acini, a lobulated architectural pattern, and stromal sclerosis. The luminal epithelial and myopepithelial cells are preserved. Microcalcifications and foci of apocrine metaplasia may be present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast fibrocystic change, proliferative type","termid":"MONDO:0002585"},{"relation_name":"is_a","term_name":"breast adenosis","termid":"MONDO:0003725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerosing adenosis of breast","secondary_identifiers":["SCTID:105261000119101","MEDGEN:235582","DOID:8310","NCIT:C5205","UMLS:C1335931"],"synonyms":[{"name":"breast sclerosing adenosis","type":"exact"},{"name":"sclerosing adenosis","type":"exact"},{"name":"sclerosing adenosis of the breast","type":"exact"},{"name":"sclerosing breast adenosis","type":"exact"}],"termid":"MONDO:0004531","xrefs":{"Monarch":{"xref_id":"0004531"}}}


id: PBO:0071374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 33","termid":"PBO:0071374"}


id: GO:0021551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the central nervous system is generated and organized. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system morphogenesis","termid":"GO:0021551"}


id: MONDO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the throat most often caused by viral and bacterial infections. Other causes include allergens, chemical substances, and trauma.","definition_xrefs":["NCIT:C26851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upper respiratory tract disorder","termid":"MONDO:0004867"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pharyngitis","secondary_identifiers":["MESH:D010612","ICD9:472","ICD9:478.20","UMLS:C0031350","ICD9:462","MEDGEN:45846","SCTID:405737000","DOID:2275"],"synonyms":[{"name":"Sore throat","type":"exact"},{"name":"Sore throat - chronic","type":"narrow"},{"name":"acute pharyngitis","type":"narrow"},{"name":"acute sore throat","type":"narrow"},{"name":"chronic pharyn/nasopharyngitis","type":"narrow"},{"name":"chronic pharyngitis","type":"narrow"},{"name":"chronic pharyngitis and nasopharyngitis","type":"narrow"},{"name":"chronic sore throat","type":"narrow"},{"name":"inflamed throat","type":"exact"},{"name":"inflammation of throat","type":"exact"},{"name":"persistent sore throat","type":"narrow"},{"name":"pharyngeal disease","type":"broad"},{"name":"pharyngeal disorder","type":"broad"},{"name":"pharyngitis - acute","type":"narrow"},{"name":"throat inflammation","type":"exact"}],"termid":"MONDO:0002258","xrefs":{"Monarch":{"xref_id":"0002258"}}}


id: MONDO:1012536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical thrombasthenia, non-human animal","termid":"MONDO:1011706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical thrombasthenia, horse","secondary_identifiers":["OMIA:002272-9796"],"termid":"MONDO:1012536","xrefs":{"Monarch":{"xref_id":"1012536"}}}


id: MONDO:0010476
data:
  {"annotated_genes":["SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86449],"is_not":false,"summary":null,"term":"MONDO:0010476"}]},"cv_name":"mondo","definition":"Beta-propeller protein-associated neurodegeneration (BPAN), also known as static encephalopathy of childhood with neurodegeneration in adulthood, is a rare form of neurodegeneration with brain iron accumulation (NBIA) characterized by early-onset developmental delay and further neurological deterioration in early adulthood.","definition_xrefs":["Orphanet:329284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0002039"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:763887","SCTID:732959007","NCIT:C175210","UMLS:C3550973","OMIM:300894","DOID:0110739","GARD:12570"],"synonyms":[{"name":"BPAN","type":"exact"},{"name":"NBIA5","type":"exact"},{"name":"SENDA","type":"exact"},{"name":"WDR45 neurodegeneration with brain iron accumulation","type":"exact"},{"name":"beta-propeller protein-associated neurodegeneration","type":"exact"},{"name":"neurodegeneration with brain iron accululation 5","type":"related"},{"name":"neurodegeneration with brain iron accumulation 5","type":"exact"},{"name":"neurodegeneration with brain iron accumulation 5, X-linked dominant","type":"exact"},{"name":"neurodegeneration with brain iron accumulation caused by mutation in WDR45","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 5","type":"exact"},{"name":"static encephalopathy Of childhood with neurodegeneration In adulthood","type":"exact"},{"name":"static encephalopathy of childhood with neurdegeneration in adulthood","type":"exact"},{"name":"static encephalopathy of childhood with neurodegeneration in adulthood","type":"related"}],"termid":"MONDO:0010476","terms_by_termid":{"MONDO:0010476":null},"xrefs":{"Monarch":{"xref_id":"0010476"}}}


id: PBO:0089336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, pyruvate Mpc1","termid":"PBO:0089336"}


id: MOD:01455
data:
  {"annotated_genes":["SJAG_02498","SJAG_02472","SJAG_02763","SJAG_01587","SJAG_03012","SJAG_00318","SJAG_02183","SJAG_02592","SJAG_00331"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80173,79999,80280,80278,80227,80215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00042"},{"annotations":[80043,80042,119028,119026,119025,118661,119027,118662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl or carboxyl hydrogen with a phosphono group (H2PO3 or 'phosphate').","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated residue","termid":"MOD:00696"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00318":null,"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null,"SJAG_02472":null,"SJAG_02498":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phosphorylated residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"synonyms":[{"name":"OPhosRes","type":"exact"}],"termid":"MOD:01455","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00042":null,"MOD:00046":null}}


id: PBO:0080856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YES proto-oncogene 1, Src family tyrosine kinase","termid":"PBO:0080856"}


id: PR:O14067
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1687.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.08","synonyms":[{"name":"Spom972h-SPAC1687.08","type":"exact"}],"termid":"PR:O14067"}


id: MONDO:0018508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of small intestine carcinoma that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare carcinoma of small intestine (obsolete MONDO:0018508)","secondary_identifiers":["Orphanet:423957"],"synonyms":[{"name":"rare carcinoma of small bowel","type":"exact"},{"name":"rare small intestine carcinoma","type":"exact"}],"termid":"MONDO:0018508","xrefs":{"Monarch":{"xref_id":"0018508"}}}


id: PBO:0110068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol pyrophosphatase Siw14","termid":"PBO:0110068"}


id: FYPO:0006820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate of cell growth is abnormal. Cell growth is the irreversible increase in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["PomBase:mah","GO:0016049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell growth","termid":"FYPO:0002862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell growth rate","termid":"FYPO:0006820"}


id: GO:0090353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of polygalacturonase.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0004857","GO:0003674","GO:0098772","GO:0030234","GO:0140678"],"is_obsolete":false,"name":"polygalacturonase inhibitor activity","termid":"GO:0090353"}


id: GO:0008513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of organic cations from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"secondary active organic cation transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-549241","GO:0015354"],"synonyms":[{"name":"organic cation porter activity","type":"related"},{"name":"polyspecific organic cation transmembrane transporter activity","type":"narrow"}],"termid":"GO:0008513"}


id: GO:0008401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of retinoic acid to 4-hydroxy-retinoic acid.","definition_xrefs":["PMID:19519282","PMID:9250660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"retinoic acid 4-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-212007","Reactome:R-HSA-5602050","Reactome:R-HSA-211923","Reactome:R-HSA-5602063","Reactome:R-HSA-5362525","Reactome:R-HSA-211874"],"synonyms":[{"name":"cytochrome P450 CYP261","type":"narrow"}],"termid":"GO:0008401"}


id: MONDO:1010519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holoprosencephaly that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly, non-human animal","termid":"MONDO:1010033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holoprosencephaly, sheep","secondary_identifiers":["OMIA:000478-9940"],"termid":"MONDO:1010519","xrefs":{"Monarch":{"xref_id":"1010519"}}}


id: PBO:0004353
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystonia","termid":"PBO:0004353"}


id: PBO:0077020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"theg spermatid protein like","termid":"PBO:0077020"}


id: GO:0034174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 12.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 12 signaling pathway","synonyms":[{"name":"TLR12 signaling pathway","type":"exact"},{"name":"toll-like receptor 12 signalling pathway","type":"exact"}],"termid":"GO:0034174"}


id: GO:1901568
data:
  {"annotated_genes":["SJAG_03471","SJAG_03909","SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[112862,105064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acid derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid derivative metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid derivative metabolism","type":"exact"}],"termid":"GO:1901568","terms_by_termid":{"GO:0035336":null,"GO:0035338":null}}


id: GO:1905842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxidopamine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:rz","PMID:23721876","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to catecholamine stimulus","termid":"GO:0071870"},{"relation_name":"is_a","term_name":"response to oxidopamine","termid":"GO:1905841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxidopamine","termid":"GO:1905842"}


id: PBO:0057513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 631","termid":"PBO:0057513"}


id: PBO:0088510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein AdoMet-dependent proline dimethyltransferase Tae1","termid":"PBO:0088510"}


id: GO:0060595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a fibroblast growth factor to its receptor on the surface of al cell in the epidermis resulting in the formation of the mammary line. The mammary line is a ridge of epidermal cells that will form the mammary placodes.","definition_xrefs":["GOC:dph","PMID:16168142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"mammary gland specification","termid":"GO:0060594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in mammary gland specification","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in mammary gland specification","type":"exact"}],"termid":"GO:0060595"}


id: GO:0051698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-saccharopine + O2 = (S)-2-amino-6-oxohexanoate + H2O2 + L-glutamate.","definition_xrefs":["PMID:16233628","RHEA:28210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"saccharopine oxidase activity","secondary_identifiers":["EC:1.5.3.18"],"synonyms":[{"name":"SAX activity","type":"broad"}],"termid":"GO:0051698"}


id: GO:1990155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Dsc E3 ubiquitin ligase complex, an E3 ubiquitin ligase complex localized to the ER and Golgi membrane.","definition_xrefs":["PMID:23760507","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"Dsc E3 ubiquitin ligase complex assembly","synonyms":[{"name":"Dsc complex assembly","type":"exact"}],"termid":"GO:1990155"}


id: FYPO:0005440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, is elongated, and in which the nucleus is larger than normal. The cell contains one nucleus and no septum. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PMID:12653962","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"enlarged nucleus during vegetative growth","termid":"FYPO:0000344"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002403","FYPO:0000002","FYPO:0000005","FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"swollen elongated cell with enlarged nucleus","synonyms":[{"name":"elongated cell with enlarged nucleus and increased cell volume","type":"exact"},{"name":"enlarged elongated cell with enlarged nucleus","type":"related"},{"name":"large elongated cell with enlarged nucleus","type":"related"},{"name":"swollen elongated mononucleate aseptate cell with enlarged nucleus","type":"exact"},{"name":"swollen elongated vegetative cell with enlarged nucleus","type":"exact"}],"termid":"FYPO:0005440"}


id: PBO:0057267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 492","termid":"PBO:0057267"}


id: PBO:0086626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; overexpression causes a cell cycle delay or arrest; YML053C is not an essential gene","termid":"PBO:0086626"}


id: GO:0005799
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coatomer (obsolete GO:0005799)","synonyms":[{"name":"COPI vesicle","type":"related"},{"name":"coatomer","type":"exact"}],"termid":"GO:0005799"}


id: GO:0050639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-desacetyltaxuyunnanin C + acetyl-CoA = CoA + taxuyunnanin C.","definition_xrefs":["RHEA:18837","EC:2.3.1.163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"10-hydroxytaxane O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07252","MetaCyc:2.3.1.163-RXN"],"synonyms":[{"name":"acetyl coenzyme A: 10-hydroxytaxane O-acetyltransferase activity","type":"related"},{"name":"acetyl coenzyme A:10-hydroxytaxane O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:taxan-10beta-ol O-acetyltransferase","type":"broad"}],"termid":"GO:0050639"}


id: PBO:0042231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 3 (pseudogene)","termid":"PBO:0042231"}


id: PBO:0044553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein like 1","termid":"PBO:0044553"}


id: PBO:0062447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 111 pseudogene","termid":"PBO:0062447"}


id: MONDO:0003604
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A hormone producing pituitary gland tumor, associated with a hormonal syndrome.","definition_xrefs":["NCIT:C7047"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pituitary cancer","termid":"MONDO:0002109"},{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"functioning endocrine neoplasm","termid":"MONDO:0021120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"functioning pituitary gland neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0851693","MEDGEN:163414","DOID:5716","ICD9:237.0","SCTID:448148000"],"synonyms":[{"name":"functioning endocrine neoplasm of pituitary gland","type":"exact"},{"name":"functioning pituitary gland neoplasm","type":"exact"},{"name":"functioning pituitary neoplasm","type":"exact"},{"name":"functioning pituitary tumor","type":"related"},{"name":"functioning pituitary tumour","type":"related"},{"name":"growth hormone producing pituitary tumour","type":"related"},{"name":"hormone producing pituitary cancer","type":"related"},{"name":"hormone producing pituitary neoplasm","type":"exact"},{"name":"pituitary gland functioning endocrine neoplasm","type":"exact"},{"name":"pituitary neoplasms, hormone producing","type":"exact"},{"name":"pituitary tumors, hormone producing","type":"exact"},{"name":"secretory pituitary tumor","type":"related"},{"name":"secretory pituitary tumour","type":"related"},{"name":"somatotropinoma","type":"related"}],"termid":"MONDO:0003604","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0003604"}}}


id: PBO:0078337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 3-1","termid":"PBO:0078337"}


id: GO:0043966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 acetylation (obsolete GO:0043966)","termid":"GO:0043966"}


id: PBO:0111833
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jmjC domain","termid":"PBO:0111833"}


id: FYPO:0001818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoribosylformylglycinamidine cyclo-ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal phosphoribosylformylglycinamidine cyclo-ligase activity","synonyms":[{"name":"abnormal AIR synthase activity","type":"exact"},{"name":"abnormal AIR synthetase activity","type":"exact"}],"termid":"FYPO:0001818"}


id: GO:0062051
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that functions to transport lipopolysaccharide from its site of synthesis at the cytoplasmic membrane across the periplasm to the outer membrane in an ATP-dependent manner.","definition_xrefs":["PMID:29449493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"lipopolysaccharide transport system","termid":"GO:0062051"}


id: PBO:0075968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 8","termid":"PBO:0075968"}


id: PBO:0063338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen pseudogene 3","termid":"PBO:0063338"}


id: RO:0002622
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"visits","termid":"RO:0002618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visits_flowers_of","termid":"RO:0002622"}


id: PBO:0085563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein distantly similar to ceramide synthases, Lag1p and Lac1p; mutation confers sensitivity to inhibitors of sphingolipid biosynthesis","termid":"PBO:0085563"}


id: MONDO:0100370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A new infection by the hepatitis B virus, which can be transmitted by direct contact of infected blood with mucous membranes or open areas of the skin. Signs and symptoms may include loss of appetite, joint and muscle pain, low-grade fever and stomach pain. Two to six percent of adults progress to a chronic infection, while 90% of infants become chronically ill. A vaccine is available for those at risk.","definition_xrefs":["NCIT:C157781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis B virus infection","termid":"MONDO:0005344"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"acute hepatitis B virus infection","synonyms":[{"name":"acute hepatitis B","type":"exact"}],"termid":"MONDO:0100370","xrefs":{"Monarch":{"xref_id":"0100370"}}}


id: MONDO:0007502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear pits, posterior helical","secondary_identifiers":["UMLS:C1851900","MEDGEN:342119","OMIM:128710"],"synonyms":[{"name":"ear pits, posterior helical","type":"exact"},{"name":"earlobe Indentations, posterior","type":"related"},{"name":"posterior helical Ear pits","type":"related"}],"termid":"MONDO:0007502","xrefs":{"Monarch":{"xref_id":"0007502"}}}


id: PR:Q9UTC7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6 small nuclear ribonucleoprotein Prp4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00203","PANTHER:PTHR19846:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C227.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.12","secondary_identifiers":["UniProtKB:Q9UTC7"],"synonyms":[{"name":"Spom972h-PRPF4","type":"exact"}],"termid":"PR:Q9UTC7"}


id: GO:0022810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the active transport of a solute across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uniporter activity","termid":"GO:0015292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"membrane potential driven uniporter activity","synonyms":[{"name":"porter","type":"broad"}],"termid":"GO:0022810"}


id: PBO:0055427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2857","termid":"PBO:0055427"}


id: MONDO:0009285
data:
  {"annotated_genes":["SJAG_03316","SJAG_01612"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85756,85757],"is_not":false,"summary":null,"term":"MONDO:0009285"}]},"cv_name":"mondo","definition":"Gamma-glutamyl transpeptidase deficiency is characterized by increased glutathione concentration in the plasma and urine.","definition_xrefs":["Orphanet:33573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01612":null,"SJAG_03316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019241"}],"interesting_parent_ids":["MONDO:0019241","MONDO:0005066"],"is_obsolete":false,"name":"gamma-glutamyl transpeptidase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:270.8","icd11.foundation:2074850874","MEDGEN:82813","DOID:0111257","GARD:10099","MESH:C536836","UMLS:C0268524","SCTID:78586005","OMIM:231950"],"synonyms":[{"name":"GGT deficiency","type":"related"},{"name":"GGT1 deficiency","type":"related"},{"name":"GTG deficiency","type":"related"},{"name":"gamma-glutamyltransferase deficiency","type":"related"},{"name":"gamma-glutamyltranspeptidase deficiency","type":"related"},{"name":"glutathioninuria","type":"exact"},{"name":"glutathionuria","type":"exact"},{"name":"inborn error of glutathione hydrolase activity","type":"exact"},{"name":"inborn glutathione hydrolase activity disorder","type":"exact"},{"name":"rare inborn error of glutathione hydrolase activity","type":"exact"}],"termid":"MONDO:0009285","terms_by_termid":{"MONDO:0009285":null},"xrefs":{"Monarch":{"xref_id":"0009285"}}}


id: PBO:0039205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 8","termid":"PBO:0039205"}


id: MONDO:0013801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SCN8A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0005066","MONDO:0004736","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 13","secondary_identifiers":["OMIM:614558","MEDGEN:482821","SCTID:765170001","UMLS:C3281191","DOID:0080445","GARD:13085"],"synonyms":[{"name":"DEE13","type":"exact"},{"name":"EIEE13","type":"exact"},{"name":"SCN8A early infantile epileptic encephalopathy","type":"exact"},{"name":"SCN8A encephalopathy","type":"related"},{"name":"SCN8A epilepsy","type":"related"},{"name":"developmental and epileptic encephalopathy 13","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SCN8A","type":"exact"},{"name":"early infantile epileptic encephalopathy-13","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 13","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 13","type":"exact"}],"termid":"MONDO:0013801","xrefs":{"Monarch":{"xref_id":"0013801"}}}


id: PBO:0061635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16","termid":"PBO:0061635"}


id: PBO:0013819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family protein Art1","termid":"PBO:0013819"}


id: GO:1905386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to presynapse.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:24449494","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to synapse","termid":"GO:1902474"},{"relation_name":"is_a","term_name":"regulation of protein localization to presynapse","termid":"GO:1905384"},{"relation_name":"positively_regulates","term_name":"protein localization to presynapse","termid":"GO:1905383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to presynapse","synonyms":[{"name":"activation of protein localisation in presynapse","type":"narrow"},{"name":"activation of protein localisation to presynapse","type":"narrow"},{"name":"activation of protein localization in presynapse","type":"narrow"},{"name":"activation of protein localization to presynapse","type":"narrow"},{"name":"activation of recruitment of presynaptic proteins","type":"narrow"},{"name":"positive regulation of protein localisation in presynapse","type":"exact"},{"name":"positive regulation of protein localisation to presynapse","type":"exact"},{"name":"positive regulation of protein localization in presynapse","type":"exact"},{"name":"positive regulation of recruitment of presynaptic proteins","type":"exact"},{"name":"up regulation of protein localisation in presynapse","type":"exact"},{"name":"up regulation of protein localisation to presynapse","type":"exact"},{"name":"up regulation of protein localization in presynapse","type":"exact"},{"name":"up regulation of protein localization to presynapse","type":"exact"},{"name":"up regulation of recruitment of presynaptic proteins","type":"exact"},{"name":"up-regulation of protein localisation in presynapse","type":"exact"},{"name":"up-regulation of protein localisation to presynapse","type":"exact"},{"name":"up-regulation of protein localization in presynapse","type":"exact"},{"name":"up-regulation of protein localization to presynapse","type":"exact"},{"name":"up-regulation of recruitment of presynaptic proteins","type":"exact"},{"name":"upregulation of protein localisation in presynapse","type":"exact"},{"name":"upregulation of protein localisation to presynapse","type":"exact"},{"name":"upregulation of protein localization in presynapse","type":"exact"},{"name":"upregulation of protein localization to presynapse","type":"exact"},{"name":"upregulation of recruitment of presynaptic proteins","type":"exact"}],"termid":"GO:1905386"}


id: GO:0019180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + dTDP-4-amino-4,6-dideoxy-D-galactose = L-glutamate + dTDP-4-dehydro-6-deoxy-D-galactose.","definition_xrefs":["RHEA:10368","EC:2.6.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dTDP-4-amino-4,6-dideoxygalactose transaminase activity","secondary_identifiers":["KEGG_REACTION:R04438","MetaCyc:RFFTRANS-RXN"],"synonyms":[{"name":"dTDP-4,6-dideoxy-D-galactose:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"dTDP-4-amino-4,6-dideoxygalactose aminotransferase activity","type":"related"},{"name":"dTDP-fucosamine aminotransferase activity","type":"exact"},{"name":"thymidine diphosphate 4-keto-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"thymidine diphosphoaminodideoxygalactose aminotransferase activity","type":"related"}],"termid":"GO:0019180"}


id: MONDO:0003753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign exophytic squamous cell neoplasm with papillary growth that arises from the nasal vestibule.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous papilloma","termid":"MONDO:0001825"},{"relation_name":"is_a","term_name":"benign neoplasm of nasal cavity","termid":"MONDO:0021475"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal vestibule squamous papilloma","secondary_identifiers":["UMLS:C0339826","ICD9:478.19","MEDGEN:90945","NCIT:C4369","DOID:6059","SCTID:232364006"],"synonyms":[{"name":"nasal vestibule papilloma","type":"exact"},{"name":"nasal vestibule squamous papilloma","type":"exact"},{"name":"papilloma of nasal vestibule","type":"exact"},{"name":"papilloma of the nasal vestibule","type":"exact"},{"name":"squamous papilloma of nasal vestibule","type":"exact"},{"name":"squamous papilloma of the nasal vestibule","type":"exact"}],"termid":"MONDO:0003753","xrefs":{"Monarch":{"xref_id":"0003753"}}}


id: GO:1905714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mitochondrial calcium release that is involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:26644474"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial calcium release involved in regulation of presynaptic cytosolic calcium ion concentration (obsolete GO:1905714)","synonyms":[{"name":"calcium ion transmembrane export from mitochondrion involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium ion transmembrane export from mitochondrion involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"mitochondrial calcium release involved in regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:1905714"}


id: PBO:0056628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MED8 antisense RNA 1","termid":"PBO:0056628"}


id: MOD:00455
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a quaternary amine reagent heavy (+6amu) form group.","definition_xrefs":["PubMed:11857757","Unimod:62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+6amu) (N-term & K)","synonyms":[{"name":"GIST-Quat:2H(6)","type":"related"},{"name":"Quaternary amine labeling reagent heavy form (+6amu), N-term & K","type":"related"}],"termid":"MOD:00455"}


id: PBO:0085958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; originally considered essential but deletion overlapped the TATA box of neighboring essential gene HYP2, while deletion that avoids the HYP2 TATA box is viable; transcription may be regulated by Gcr1p","termid":"PBO:0085958"}


id: PBO:0086984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of type 1 protein phosphatase Glc7p; involved in negative regulation of glucose-repressible genes; involved in regulation of the nucleocytoplasmic shuttling of Hxk2p; REG1 has a paralog, REG2, that arose from the whole genome duplication","termid":"PBO:0086984"}


id: PBO:0046261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 1","termid":"PBO:0046261"}


id: GO:0019866
data:
  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id: PBO:0086264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates ubiquitination of Rsp5p; has a WW domain consensus motif of PPPSY (residues 131-135) that mediates binding of Rsp5p to Ubp2p; contains an UBA domain; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086264"}


id: PBO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telobox motif","termid":"PBO:0001879"}


id: GO:0002731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"negatively_regulates","term_name":"dendritic cell cytokine production","termid":"GO:0002371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic cell cytokine production","synonyms":[{"name":"down regulation of dendritic cell cytokine production","type":"exact"},{"name":"down-regulation of dendritic cell cytokine production","type":"exact"},{"name":"downregulation of dendritic cell cytokine production","type":"exact"},{"name":"inhibition of dendritic cell cytokine production","type":"narrow"}],"termid":"GO:0002731"}


id: GO:0097426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intermediate filament composed of glial fibrillary acidic protein (GFAP) and found in astrocytes.","definition_xrefs":["NIF_Subcellular:sao1863852493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glial filament","termid":"GO:0097426"}


id: MONDO:0013981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic movement disorder characterized by autosomal dominant, adult-onset, slowly progressive, multifocal, cortical myoclonus. Patients present somatosensory-evoked, brief, jerky, involuntary movements in the face, arms and legs, associated in most of cases with sustained, multiple, sudden falls without loss of consciousness. Seizures or other neurological deficits, aside from mild cerebellar ataxia late in the course of the illness, are absent.","definition_xrefs":["Orphanet:319189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, familial","secondary_identifiers":["GARD:17444","SCTID:763770005","OMIMPS:614937"],"synonyms":[{"name":"FCM","type":"related"},{"name":"familial cortical myoclonus","type":"exact"},{"name":"familial myoclonus","type":"exact"},{"name":"myoclonus, familial cortical","type":"exact"}],"termid":"MONDO:0013981","xrefs":{"Monarch":{"xref_id":"0013981"}}}


id: PBO:0005551
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.34","termid":"PBO:0005551"}


id: MONDO:0002803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intestinal pseudo-obstruction is a digestive disorder in whichthe intestinal walls are unable to contract normally (called hypomotility); the conditionresembles a true obstruction, but no actual blockage exists. Signs and symptoms may include abdominal pain; vomiting; diarrhea; constipation; malabsorption of nutrients leading to weight loss and/or failure to thrive ; and other symptoms. It may be classified as neuropathic (from lack of nerve function)or myopathic (from lack of muscle function), depending on the source of the abnormality. The condition is sometimes inherited (in an X-linked recessive or autosomal dominant manner)and may be caused by mutations in the FLNA gene; it may also be acquired after certain illnesses. The goal of treatment is to provide relief from symptoms andensure that nutritional support is adequate.","direct_ancestors":[{"relation_name":"is_a","term_name":"ileus","termid":"MONDO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal pseudo-obstruction","secondary_identifiers":["SCTID:235825006","UMLS:C0021847","GARD:6789","NCIT:C34733","DOID:3878","MESH:D007418","ICD9:569.89","MEDGEN:5864"],"synonyms":[{"name":"Chronic intestinal pseudo-obstruction.","type":"exact"},{"name":"hollow visceral myopathy","type":"related"},{"name":"intestinal pseudo-obstruction","type":"exact"},{"name":"intestinal pseudoobstruction","type":"related"},{"name":"intestine pseudoobstruction","type":"exact"},{"name":"pseudo-obstruction of intestine","type":"exact"}],"termid":"MONDO:0002803","xrefs":{"Monarch":{"xref_id":"0002803"}}}


id: GO:0060468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of fertilization process that takes place as part of egg activation, ensuring that only a single sperm fertilizes the egg.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fertilization","termid":"GO:0060467"},{"relation_name":"part_of","term_name":"egg activation","termid":"GO:0007343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prevention of polyspermy","synonyms":[{"name":"negative regulation of fertilization involved in egg activation","type":"exact"},{"name":"polyspermy block","type":"exact"}],"termid":"GO:0060468"}


id: PBO:0054146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1513","termid":"PBO:0054146"}


id: GO:0062240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to euchromatin and the nuclear inner membrane, in order to establish and maintain the euchromatin location and organization.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-nuclear membrane anchor activity","termid":"GO:0140707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"euchromatin-nuclear membrane anchor activity","synonyms":[{"name":"euchromatin-nuclear membrane tether activity","type":"exact"},{"name":"nuclear membrane-euchromatin anchor activity","type":"exact"},{"name":"nuclear membrane-euchromatin tether activity","type":"exact"}],"termid":"GO:0062240"}


id: GO:0048831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot development.","definition_xrefs":["GOC:tb","PMID:16361392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system development","synonyms":[{"name":"regulation of shoot development","type":"exact"}],"termid":"GO:0048831"}


id: PBO:0056699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEIS1 antisense RNA 2","termid":"PBO:0056699"}


id: GO:1990018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Elongated process of a tanycyte, devoid of cytoplasmic extensions, that courses through the hypothalamic nuclei to form small endfoot processes that terminate either on blood vessels or at the pial surface of the brain. A tanycyte is a specialized elongated ventricular ependymal cell.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao1749953771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tail portion of tanycyte","synonyms":[{"name":"tail portion","type":"broad"}],"termid":"GO:1990018"}


id: PBO:0090552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp5","termid":"PBO:0090552"}


id: GO:0034386
data:
  {"annotated_genes":["SJAG_03434"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91216],"is_not":false,"summary":null,"term":"GO:0034386"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 4-aminobutanoate = L-glutamate + succinate semialdehyde.","definition_xrefs":["RHEA:23352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-aminobutyrate:2-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.6.1.19","MetaCyc:GABATRANSAM-RXN"],"synonyms":[{"name":"4-aminobutanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"4-aminobutyrate-2-ketoglutarate aminotransferase activity","type":"related"},{"name":"4-aminobutyrate-2-oxoglutarate aminotransferase activity","type":"related"},{"name":"4-aminobutyrate-2-oxoglutarate transaminase activity","type":"related"},{"name":"4-aminobutyric acid 2-ketoglutaric acid aminotransferase activity","type":"related"},{"name":"GABA-2-oxoglutarate aminotransferase activity","type":"related"},{"name":"GABA-2-oxoglutarate transaminase activity","type":"related"},{"name":"GABA-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"GABA-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"GABA-alpha-ketoglutaric acid transaminase activity","type":"related"},{"name":"GABA-alpha-oxoglutarate aminotransferase activity","type":"related"},{"name":"GABA-oxoglutarate aminotransferase activity","type":"related"},{"name":"GABA-oxoglutarate transaminase activity","type":"related"},{"name":"gamma-aminobutyrate-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"gamma-aminobutyrate-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"gamma-aminobutyrate:alpha-oxoglutarate aminotransferase activity","type":"related"},{"name":"gamma-aminobutyric acid-2-oxoglutarate transaminase activity","type":"related"},{"name":"gamma-aminobutyric acid-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"gamma-aminobutyric acid-alpha-ketoglutaric acid aminotransferase activity","type":"related"}],"termid":"GO:0034386","terms_by_termid":{"GO:0034386":null}}


id: GO:1990036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ions into a sarcoplasmic reticulum.","definition_xrefs":["PMID:17286271","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"sarcoplasmic reticulum calcium ion transport","termid":"GO:0070296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}


id: SO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of known length which may be used to manufacture a longer region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly_component","synonyms":[{"name":"assembly component","type":"exact"}],"termid":"SO:0000143"}


id: PBO:0000322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein and tRNA methyltransferase regulatory subunit Trm112 (predicted)","termid":"PBO:0000322"}


id: PBO:0075172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 2","termid":"PBO:0075172"}


id: FYPO:0001013
data:
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