# terms

id: GO:0005650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, alpha-subunit transport factor (obsolete GO:0005650)","synonyms":[{"name":"CAS","type":"related"},{"name":"importin, alpha-subunit transport factor","type":"exact"}],"termid":"GO:0005650"}


id: MONDO:0008083
data:
  {"annotated_genes":["SJAG_03052","SJAG_02518"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85962,85963],"is_not":false,"summary":null,"term":"MONDO:0008083"}]},"cv_name":"mondo","definition":"A condition associated with mutation(s) in the DNAJC5 gene, encoding dnaJ homolog subfamily C member 5. The condition is one of a group of genetically heterogeneous neurodegenerative disorders, characterized by accumulation of intracellular lipopigments.","definition_xrefs":["NCIT:C128116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult neuronal ceroid lipofuscinosis","termid":"MONDO:0019260"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02518":null,"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005559","MONDO:0002039","MONDO:0002561"],"is_obsolete":false,"name":"ceroid lipofuscinosis, neuronal, 4 (Kufs type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1222","MEDGEN:320287","OMIM:162350","DOID:0110720","UMLS:C1834207","Orphanet:228343"],"synonyms":[{"name":"CLN4","type":"exact"},{"name":"CLN4B","type":"related"},{"name":"CLN4B disease","type":"exact"},{"name":"Kuf's disease type B","type":"related"},{"name":"Kuf's disease, autosomal dominant","type":"related"},{"name":"Kufs disease, autosomal dominant","type":"related"},{"name":"adult neuronal ceroid lipofuscinosis 4B","type":"related"},{"name":"autosomal dominant Kufs disease","type":"exact"},{"name":"autosomal dominant neuronal ceroid lipofuscinosis 4B","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 4 (Kufs type)","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 4 (Kufs type), autosomal dominant","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 4B, autosomal dominant","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, parry type","type":"related"},{"name":"neuronal ceroid lipofuscinosis 4 parry type","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 4B","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 4B","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, parry type","type":"exact"}],"termid":"MONDO:0008083","terms_by_termid":{"MONDO:0008083":null},"xrefs":{"Monarch":{"xref_id":"0008083"}}}


id: MONDO:0011779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal atresia, encephalocele, and limb deformities","secondary_identifiers":["UMLS:C1846721","MESH:C564620","OMIM:607132","MEDGEN:335504"],"synonyms":[{"name":"Lel","type":"related"},{"name":"laryngeal atresia, encephalocele, and limb deformities","type":"exact"}],"termid":"MONDO:0011779","xrefs":{"Monarch":{"xref_id":"0011779"}}}


id: PBO:0059244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L14 pseudogene 1","termid":"PBO:0059244"}


id: MONDO:0958237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated hyperferritinemia","secondary_identifiers":["OMIM:620729"],"synonyms":[{"name":"hyperferritinemia","type":"exact"}],"termid":"MONDO:0958237","xrefs":{"Monarch":{"xref_id":"0958237"}}}


id: GO:0042729
data:
  {"annotated_genes":["SJAG_01775","SJAG_00918","SJAG_01224","SJAG_05266","SJAG_01371","SJAG_01211","SJAG_05319","SJAG_03437","SJAG_05220","SJAG_02731"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88652,89252,90487,98118,100005,106962,108340,109350,113537,116357],"is_not":false,"summary":null,"term":"GO:0042729"}]},"cv_name":"cellular_component","definition":"A large protein complex, containing around 8-10 subunits in yeast, including Duo1p, Dam1p, Dad1p and Ask1p. The complex forms part of the outer kinetochore, associates with microtubules when the kinetochore attaches to the spindle, and plays a role in spindle attachment, chromosome segregation and spindle stability.","definition_xrefs":["PMID:15640796","GOC:jl","PMID:11799062","GOC:vw","PMID:11782438","PMID:15632076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634","GO:0005694","GO:0000776"],"is_obsolete":false,"name":"DASH complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043925","GO:0043926"],"synonyms":[{"name":"DDD complex","type":"exact"},{"name":"Dam1 complex","type":"exact"},{"name":"Duo1p-Dam1p-Dad1p complex","type":"exact"},{"name":"condensed nuclear chromosome kinetochore-associated DASH complex","type":"exact"}],"termid":"GO:0042729","terms_by_termid":{"GO:0042729":null}}


id: PBO:0076687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 4 pseudogene 1","termid":"PBO:0076687"}


id: MONDO:0018041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other immunodeficiency syndrome with predominantly antibody defects (obsolete MONDO:0018041)","secondary_identifiers":["Orphanet:331244"],"termid":"MONDO:0018041","xrefs":{"Monarch":{"xref_id":"0018041"}}}


id: GO:0098837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A recycling endosome of the postsynapse. In postsynaptic terminals with dendritic spines, it is typically located at the base of a dendritic spine. It is involved in recycling of neurotransmitter receptors to the postsynaptic membrane. In some cases at least, this recycling is activated by postsynaptic signaling and so can play a role in long term potentiation.","definition_xrefs":["PMID:20820847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recycling endosome","termid":"GO:0055037"},{"relation_name":"is_a","term_name":"postsynaptic endosome","termid":"GO:0098845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"postsynaptic recycling endosome","synonyms":[{"name":"postsynaptic endosomal recycling compartment","type":"broad"},{"name":"postsynaptic recycling outpost","type":"exact"}],"termid":"GO:0098837"}


id: GO:0071976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility that results in the smooth movement of a cell along a solid surface.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell gliding","synonyms":[{"name":"cell gliding motility","type":"exact"}],"termid":"GO:0071976"}


id: MONDO:0033566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 48","secondary_identifiers":["DOID:0112112","MEDGEN:1732052","UMLS:C5436602","OMIM:619012"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 48","type":"related"},{"name":"COXPD48","type":"related"}],"termid":"MONDO:0033566","xrefs":{"Monarch":{"xref_id":"0033566"}}}


id: PBO:0078709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-4","termid":"PBO:0078709"}


id: PBO:0052170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 1","termid":"PBO:0052170"}


id: PBO:0081906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 863, pseudogene","termid":"PBO:0081906"}


id: GO:0043507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAP kinase activity","termid":"GO:0043406"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of JUN kinase activity","synonyms":[{"name":"positive regulation of JUNK activity","type":"exact"},{"name":"stimulation of JNK activity","type":"narrow"},{"name":"up regulation of JNK activity","type":"exact"},{"name":"up-regulation of JNK activity","type":"exact"},{"name":"upregulation of JNK activity","type":"exact"}],"termid":"GO:0043507"}


id: PBO:0029576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_DEM","termid":"PBO:0029576"}


id: PBO:0034285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dendrite_synapsed_in","termid":"PBO:0034285"}


id: PBO:0065609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 3","termid":"PBO:0065609"}


id: PBO:0011409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_output_o_axis_of","termid":"PBO:0011409"}


id: PBO:0043987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 2 receptor subunit beta","termid":"PBO:0043987"}


id: PR:O59821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component CSL4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05011","PANTHER:PTHR12686:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component csl4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.11","secondary_identifiers":["UniProtKB:O59821"],"synonyms":[{"name":"Spom972h-EXOSC1","type":"exact"}],"termid":"PR:O59821"}


id: GO:0061907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of AMPA glutamate receptor activity.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:20739563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of glutamate receptor signaling pathway","termid":"GO:1900450"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"},{"relation_name":"is_a","term_name":"regulation of AMPA receptor activity","termid":"GO:2000311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of AMPA receptor activity","termid":"GO:0061907"}


id: PBO:0108598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_changes_to_anatomical_or_cellular_structure","termid":"PBO:0108598"}


id: GO:0015895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of alkanes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Alkanes are saturated aliphatic hydrocarbon compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"alkane transport","termid":"GO:0015895"}


id: MONDO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete extraosseous Ewings sarcoma-primitive neuroepithelial tumor (obsolete MONDO:0003230)","termid":"MONDO:0003230","xrefs":{"Monarch":{"xref_id":"0003230"}}}


id: MONDO:0016278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Carcinosarcoma of the cervix uteri is a rare, malignant, mixed epithelial and mesenchymal tumor, located in the cervix uteri, composed of an admixture of carcinomatous and sarcomatous elements. It usually presents with abnormal vaginal bleeding and a round, well-defined, gray to yellowish-white, pedunculated polypoid mass protruding through the cervical canal. Association with HPV infection (especially serotype 16) has been frequently reported.","definition_xrefs":["Orphanet:213787"],"gene_count":0,"genotype_count":0,"name":"obsolete carcinosarcoma of the cervix uteri (obsolete MONDO:0016278)","termid":"MONDO:0016278","xrefs":{"Monarch":{"xref_id":"0016278"}}}


id: GO:0020013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont organism modulates the frequency, rate or extent of erythrocyte aggregation in its host organism, e.g. the binding of parasite-infected erythrocytes to uninfected erythrocytes.","definition_xrefs":["GOC:add","PMID:21305024","PMID:19467172","GOC:pr","GOC:dgh","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host erythrocyte aggregation","secondary_identifiers":["Wikipedia:Rosetting"],"synonyms":[{"name":"modulation by symbiont of host erythrocyte aggregation","type":"exact"},{"name":"rosetting","type":"exact"}],"termid":"GO:0020013"}


id: PBO:0086215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to Fpr1p; confers rapamycin resistance by competing with rapamycin for Fpr1p binding; accumulates in the nucleus upon treatment of cells with rapamycin; has similarity to D. melanogaster shuttle craft and human NFX1","termid":"PBO:0086215"}


id: MONDO:1011129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Delayed or abolished puberty in male pigs due to a variation in the KISS1 gene.","definition_xrefs":["PMID:36685939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism, non-human animal","termid":"MONDO:1010276"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism, KISS1-related, pig","secondary_identifiers":["OMIA:002619-9823"],"termid":"MONDO:1011129","xrefs":{"Monarch":{"xref_id":"1011129"}}}


id: GO:0072272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron in the metanephros. The proximal/distal axis is defined by a line that runs from the center of the kidney (proximal end) outward (distal end).","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"},{"relation_name":"part_of","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in metanephric nephron development","synonyms":[{"name":"proximal-distal pattern formation involved in metanephric nephron development","type":"exact"},{"name":"proximal/distal metanephric nephron patterning","type":"exact"}],"termid":"GO:0072272"}


id: FYPO:0004897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during nitrogen starvation measured in a cell is lower than normal (i.e. lower than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of nitrogen starvation gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of cellular response to nitrogen starvation gene mRNA","type":"exact"},{"name":"decreased level of nitrogen depletion gene mRNA during vegetative growth","type":"exact"},{"name":"decreased level of nitrogen deprivation gene mRNA during vegetative growth","type":"exact"},{"name":"decreased level of nitrogen starvation gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of nitrogen starvation gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of nitrogen starvation gene transcripts during vegetative growth","type":"exact"},{"name":"decreased nitrogen starvation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of nitrogen starvation gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004897"}


id: PBO:0044222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTXN2 antisense RNA 1","termid":"PBO:0044222"}


id: GO:0097171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ADP-L-glycero-beta-D-manno-heptose, an ADP-L-glycero-D-manno-heptose having beta-configuration at the anomeric centre of the heptose. ADP-L-glycero-beta-D-manno-heptose (also called ADP-L-beta-D-heptose or ADP-L-glycero-D-manno-heptose) is a nucleotide-sugar precursor of the inner core lipopolysaccharide (LPS) from D-glycero-beta-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:yaf","PMID:11751812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"ADP-L-glycero-beta-D-manno-heptose metabolic process","termid":"GO:0097170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ADP-L-glycero-beta-D-manno-heptose biosynthetic process","synonyms":[{"name":"ADP-L-glycero-beta-D-manno-heptose anabolism","type":"exact"},{"name":"ADP-L-glycero-beta-D-manno-heptose biosynthesis","type":"exact"},{"name":"ADP-L-glycero-beta-D-manno-heptose formation","type":"exact"},{"name":"ADP-L-glycero-beta-D-manno-heptose synthesis","type":"exact"}],"termid":"GO:0097171"}


id: PBO:0057057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 142","termid":"PBO:0057057"}


id: GO:0004924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with oncostatin-M and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"oncostatin-M receptor activity","termid":"GO:0004924"}


id: PATO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Female quality of having complete, unaltered reproductive organs","definition_xrefs":["PATOC:MF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female","termid":"PATO:0000383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intact female","termid":"PATO:0002365"}


id: MONDO:0021243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the parotid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parotid disorder","termid":"MONDO:0005899"},{"relation_name":"is_a","term_name":"neoplasm of major salivary gland","termid":"MONDO:0021368"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parotid gland neoplasm","secondary_identifiers":["UMLS:C0030581","NCIT:C3314","EFO:0003873","MEDGEN:18313","SCTID:126788000"],"synonyms":[{"name":"neoplasm of parotid","type":"exact"},{"name":"neoplasm of parotid gland","type":"exact"},{"name":"neoplasm of the parotid","type":"exact"},{"name":"neoplasm of the parotid gland","type":"exact"},{"name":"parotid gland neoplasm (disease)","type":"exact"},{"name":"parotid gland tumor","type":"exact"},{"name":"parotid gland tumour","type":"exact"},{"name":"parotid neoplasm","type":"exact"},{"name":"parotid tumor","type":"exact"},{"name":"parotid tumour","type":"exact"},{"name":"tumor of parotid","type":"exact"},{"name":"tumor of parotid gland","type":"exact"},{"name":"tumor of the parotid","type":"exact"},{"name":"tumor of the parotid gland","type":"exact"},{"name":"tumour of parotid","type":"exact"},{"name":"tumour of parotid gland","type":"exact"},{"name":"tumour of the parotid","type":"exact"},{"name":"tumour of the parotid gland","type":"exact"}],"termid":"MONDO:0021243","xrefs":{"Monarch":{"xref_id":"0021243"}}}


id: GO:0005292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lysine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"high-affinity lysine transmembrane transporter activity","synonyms":[{"name":"high affinity lysine transmembrane transporter activity","type":"exact"},{"name":"high affinity lysine transporter activity","type":"broad"}],"termid":"GO:0005292"}


id: PBO:0003933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidised protein hydrolase (predicted)","termid":"PBO:0003933"}


id: SO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, because the number of nucleotides inserted or deleted is not a multiple of three.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_altering_variant","termid":"SO:0001818"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http://vat.gersteinlab.org/formats.php","loinc:LA6694-9","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:frameshift block substitution","type":"related"},{"name":"ANNOVAR:frameshift substitution","type":"related"},{"name":"Jannovar:frameshift_variant","type":"exact"},{"name":"Seattleseq:frameshift","type":"exact"},{"name":"Seattleseq:frameshift-near-splice","type":"related"},{"name":"VAAST:frameshift_variant","type":"exact"},{"name":"VAT:deletionFS","type":"narrow"},{"name":"VAT:insertionFS","type":"narrow"},{"name":"VEP:frameshift_variant","type":"exact"},{"name":"frameshift variant","type":"exact"},{"name":"frameshift_","type":"exact"},{"name":"frameshift_coding","type":"exact"},{"name":"snpEff:FRAME_SHIFT","type":"exact"}],"termid":"SO:0001589"}


id: MONDO:0010691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare X-linked genetic vitreoretinal condition characterized by abnormal retinal development with congenital blindness. Common associated manifestations include sensorineural hearing loss and developmental delay, intellectual disability and/or behavioral disorders.","definition_xrefs":["Orphanet:649"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Norrie disease","secondary_identifiers":["DOID:0060844","ICD9:743.8","GARD:7224","MESH:C537849","SCTID:15228007","ICD10CM:H35.5","icd11.foundation:676214590","NCIT:C118634","MedDRA:10069760","OMIM:310600","UMLS:C0266526","MEDGEN:75615","NORD:1514"],"synonyms":[{"name":"Anderson-Warburg syndrome","type":"related"},{"name":"Episkopi blindness","type":"exact"},{"name":"ND","type":"related"},{"name":"NDP","type":"related"},{"name":"Norrie disease","type":"exact"},{"name":"Norrie disease, X-linked recessive","type":"exact"},{"name":"Norrie syndrome","type":"related"},{"name":"Norrie-Warburg disease","type":"exact"},{"name":"Norrie-Warburg syndrome","type":"related"},{"name":"atrophia bulborum hereditaria","type":"exact"},{"name":"fetal iritis syndrome","type":"related"},{"name":"foetal iritis syndrome","type":"related"},{"name":"nd","type":"related"},{"name":"pseudoglioma","type":"related"}],"termid":"MONDO:0010691","xrefs":{"Monarch":{"xref_id":"0010691"}}}


id: PBO:0045862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A lysine methyltransferase 1","termid":"PBO:0045862"}


id: MONDO:0020461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epiblepharon","secondary_identifiers":["MEDGEN:488856","ICD9:743.63","Orphanet:99169","GARD:19671","UMLS:C0344503","SCTID:253212001","icd11.foundation:1757021264"],"termid":"MONDO:0020461","xrefs":{"Monarch":{"xref_id":"0020461"}}}


id: PBO:0089801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S11","termid":"PBO:0089801"}


id: PBO:0065333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 57","termid":"PBO:0065333"}


id: GO:0047452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protoaphin aglucone = H2O + xanthoaphin.","definition_xrefs":["RHEA:23876","EC:4.2.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"protoaphin-aglucone dehydratase (cyclizing) activity","secondary_identifiers":["KEGG_REACTION:R03742","MetaCyc:4.2.1.73-RXN"],"synonyms":[{"name":"protoaphin dehydratase (cyclizing)","type":"related"},{"name":"protoaphin dehydratase activity","type":"related"},{"name":"protoaphin-aglucone hydro-lyase (cyclizing)","type":"related"},{"name":"protoaphin-aglucone hydro-lyase (cyclizing; xanthoaphin-forming)","type":"related"}],"termid":"GO:0047452"}


id: FYPO:0000760
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118924,118927],"is_not":false,"summary":null,"term":"FYPO:0000760"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"mating phenotype","termid":"FYPO:0000301"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0000257"],"is_obsolete":false,"name":"normal mating","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["rip1delta","cox6delta"],"synonyms":[{"name":"normal conjugation","type":"exact"},{"name":"normal conjugation with cellular fusion","type":"exact"},{"name":"normal zygote formation","type":"related"}],"termid":"FYPO:0000760","terms_by_termid":{"FYECO:0000015":null,"FYPO:0000760":null}}


id: GO:0036046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a malonyl group (CO-CH2-CO), from an amino acid residue within a protein or peptide.","definition_xrefs":["GOC:sp","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein demalonylation","termid":"GO:0036046"}


id: GO:0031714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C5a anaphylatoxin chemotactic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"C5a anaphylatoxin chemotactic receptor binding","synonyms":[{"name":"C5a anaphylatoxin chemotactic receptor ligand","type":"narrow"}],"termid":"GO:0031714"}


id: MONDO:0957795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmogenic cardiomyopathy with variable ectodermal abnormalities","secondary_identifiers":["MEDGEN:1847702","OMIM:620519","UMLS:C5882696"],"termid":"MONDO:0957795","xrefs":{"Monarch":{"xref_id":"0957795"}}}


id: PBO:0079505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 3","termid":"PBO:0079505"}


id: MONDO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cholangitis that is both sudden in onset and of a relatively short duration.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholangitis","termid":"MONDO:0004789"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"acute cholangitis","secondary_identifiers":["SCTID:6215006","UMLS:C0267917","DOID:14271","MEDGEN:82764","NCIT:C35334"],"synonyms":[{"name":"acute cholangitis","type":"exact"},{"name":"cholangitis, acute","type":"exact"}],"termid":"MONDO:0001930","xrefs":{"Monarch":{"xref_id":"0001930"}}}


id: GO:0031105
data:
  {"annotated_genes":["SJAG_00663","SJAG_03374","SJAG_01769","SJAG_04470","SJAG_04375","SJAG_01277","SJAG_03688"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115411,99602,105474,94005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032152"},{"annotations":[99605,100452,103403,97395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032151"}]},"cv_name":"cellular_component","definition":"A protein complex containing septins. Typically, these complexes contain multiple septins and are oligomeric.","definition_xrefs":["PMID:15385632","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"},{"relation_name":"part_of","term_name":"septin cytoskeleton","termid":"GO:0032156"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01277":null,"SJAG_01769":null,"SJAG_03374":null,"SJAG_03688":null,"SJAG_04375":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"septin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031105","terms_by_termid":{"GO:0032151":null,"GO:0032152":null}}


id: GO:0070490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a Pup protein is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of Pup and the epsilon-amino group of a lysine residue of the target protein.","definition_xrefs":["PMID:18980670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein pupylation","synonyms":[{"name":"Pup-protein conjugation","type":"exact"},{"name":"pupylation","type":"exact"}],"termid":"GO:0070490"}


id: MONDO:0016198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of plectin","secondary_identifiers":["Orphanet:209196","GARD:20437","MEDGEN:1842345","UMLS:C5680835"],"termid":"MONDO:0016198","xrefs":{"Monarch":{"xref_id":"0016198"}}}


id: PBO:0069366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 626, pseudogene","termid":"PBO:0069366"}


id: PBO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw3 (predicted)","termid":"PBO:0002406"}


id: MONDO:0015737
data:
  {"annotated_genes":["SJAG_03145","SJAG_03025","SJAG_03379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[86251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"},{"annotations":[85396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012538"}]},"cv_name":"mondo","definition":"Typical nemaline myopathy is a moderate neonatal form of nemaline myopathy (NM) characterized by facial and skeletal muscle weakness and mild respiratory involvement.","definition_xrefs":["Orphanet:171436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of alpha-actin","termid":"MONDO:0016193"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of nebulin","termid":"MONDO:0016194"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"},{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03025":null,"SJAG_03145":null,"SJAG_03379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"typical nemaline myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1105111633","GARD:12822","MEDGEN:1806265","UMLS:C5680453"],"synonyms":[{"name":"typical congenital nemaline myopathy","type":"related"}],"termid":"MONDO:0015737","terms_by_termid":{"MONDO:0008070":null,"MONDO:0009725":null,"MONDO:0012538":null},"xrefs":{"Monarch":{"xref_id":"0015737"}}}


id: FYPO:0004387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of DNA-directed DNA polymerase activity occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:14766746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"decreased activation of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"decreased positive regulation of DNA polymerase activity","type":"broad"},{"name":"decreased positive regulation of DNA-directed DNA polymerase activity during mitotic cell cycle","type":"related"},{"name":"decreased positive regulation of DNA-directed DNA polymerase activity during vegetative growth","type":"exact"},{"name":"reduced positive regulation of DNA-directed DNA polymerase activity","type":"exact"}],"termid":"FYPO:0004387"}


id: PBO:0070261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear 6, pseudogene","termid":"PBO:0070261"}


id: GO:0141095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A retrotransposon silencing mechanism in which a methylated cytosine residues in the genome promote heterochromatin assembly. Heterochromatin is a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:15318244"],"gene_count":0,"genotype_count":0,"name":"obsolete retrotransposon silencing by DNA methylation-dependent heterochromatin formation (obsolete GO:0141095)","termid":"GO:0141095"}


id: MONDO:0017041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrodysplatic nanism-deafness-retinitis pigmentosa syndrome is characterized by severe dwarfism, progressive scoliosis and bilateral dislocation of the hip, associated with sensorineural deafness and retinitis pigmentosa. Radiographs show diffuse osteoporosis, severe bone-age delay and dysplasia of the femoral head. It has been described in two patients. Transmission is autosomal dominant variable penetrance.","definition_xrefs":["Orphanet:2653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrodysplatic nanism-deafness-retinitis pigmentosa syndrome","secondary_identifiers":["SCTID:722108000","GARD:18776","UMLS:C4302825","MEDGEN:928494"],"synonyms":[{"name":"Osteochondrodysplatic dwarfism-deafness-retinitis pigmentosa syndrome","type":"exact"}],"termid":"MONDO:0017041","xrefs":{"Monarch":{"xref_id":"0017041"}}}


id: MONDO:0010194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Weill-Marchesani syndrome in which the cause of the disease is a mutation in the ADAMTS10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Weill-Marchesani syndrome","termid":"MONDO:0018096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weill-Marchesani syndrome 1","secondary_identifiers":["GARD:15246","MEDGEN:1637058","OMIM:277600","UMLS:C4552002"],"synonyms":[{"name":"ADAMTS10 Weill-Marchesani syndrome","type":"exact"},{"name":"WMS1","type":"related"},{"name":"Weill-Marchesani syndrome 1","type":"exact"},{"name":"Weill-Marchesani syndrome 1, recessive","type":"exact"},{"name":"Weill-Marchesani syndrome caused by mutation in ADAMTS10","type":"exact"},{"name":"Weill-Marchesani syndrome type 1","type":"exact"},{"name":"Weill-Marchesani syndrome, autosomal recessive","type":"related"},{"name":"mesodermal Dysmorphodystrophy, congenital","type":"related"},{"name":"spherophakia-brachymorphia syndrome","type":"related"}],"termid":"MONDO:0010194","xrefs":{"Monarch":{"xref_id":"0010194"}}}


id: GO:0033036
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id: MONDO:0003843
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id: PBO:0061179
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id: MONDO:0016854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"49, XXXYY syndrome is a chromosome abnormality that occurs when a male inherits two extra copies of the X chromosome and one extra copy of the Y chromosome. The condition is extremely rare with only a handful of cases reported in the medical literature. Signs and symptoms associated with these cases include severe intellectual disability, distinctive facial features, normal to tall stature, gynecomastia, hypogonadism, and behavioral abnormalities. 49, XXXYY syndrome is likely caused by a mistake (called nondisjunction) that occurs at conception or during the formation of the sperm and/or egg. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"},{"relation_name":"is_a","term_name":"aneuploidy","termid":"MONDO:0700064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"49,XXXYY syndrome","secondary_identifiers":["Orphanet:261534","MEDGEN:1667231","GARD:10922","UMLS:C4749586"],"synonyms":[{"name":"49, XXXYY syndrome","type":"related"},{"name":"XXXYY syndrome","type":"related"}],"termid":"MONDO:0016854","xrefs":{"Monarch":{"xref_id":"0016854"}}}


id: GO:1902627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of assembly of a large subunit precursor of preribosome.","definition_xrefs":["GOC:di","GO_REF:0000058","GOC:TermGenie","PMID:22735702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"assembly of large subunit precursor of preribosome","termid":"GO:1902626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of assembly of large subunit precursor of preribosome","synonyms":[{"name":"regulation of 66S preribosome assembly","type":"narrow"},{"name":"regulation of 66S preribosome formation","type":"narrow"},{"name":"regulation of preribosome, large subunit precursor formation","type":"exact"}],"termid":"GO:1902627"}


id: PBO:0064107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pejvakin","termid":"PBO:0064107"}


id: PBO:0051038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like and fibronectin type III domain containing 1","termid":"PBO:0051038"}


id: FYPO:0007748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of spindle assembly during meiosis I is longer than normal. The total duration of spindle phases I (initial assembly and first stage of elongation) and II (in which elongation normally pauses, and which coincides with metaphase I) is increased due to prolongation of either or both phases.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of spindle assembly during meiosis I","synonyms":[{"name":"increased duration of meiosis I spindle assembly","type":"exact"},{"name":"increased duration of meiosis I spindle formation","type":"exact"},{"name":"increased duration of meiotic spindle assembly during meiosis I","type":"exact"},{"name":"increased duration of meiotic spindle formation during meiosis I","type":"exact"},{"name":"increased duration of spindle assembly phase I and II during meiosis I","type":"exact"},{"name":"prolonged meiosis I spindle assembly","type":"exact"},{"name":"prolonged meiosis I spindle formation","type":"exact"},{"name":"prolonged meiosis I spindle formation phase I and II","type":"exact"},{"name":"prolonged meiosis I spindle phase I and II","type":"exact"},{"name":"prolonged meiotic spindle assembly during meiosis I","type":"exact"},{"name":"prolonged meiotic spindle formation during meiosis I","type":"exact"}],"termid":"FYPO:0007748"}


id: GO:0047460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-amino-4-chloropent-4-enoate + H2O = 2-oxopent-4-enoate + chloride + H+ + NH4.","definition_xrefs":["EC:4.5.1.4","RHEA:11620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-2-amino-4-chloropent-4-enoate dehydrochlorinase activity","secondary_identifiers":["KEGG_REACTION:R02605","MetaCyc:4.5.1.4-RXN"],"synonyms":[{"name":"L-2-amino-4-chloro-4-pentenoate dehalogenase activity","type":"related"},{"name":"L-2-amino-4-chloropent-4-enoate chloride-lyase (adding H2O; deaminating; 2-oxopent-4-enoate-forming)","type":"related"},{"name":"L-2-amino-4-chloropent-4-enoate chloride-lyase (deaminating)","type":"related"}],"termid":"GO:0047460"}


id: PBO:0089763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, meiotic, STKc MAK-like Pit1","termid":"PBO:0089763"}


id: PBO:0030467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pantothenate_import","termid":"PBO:0030467"}


id: PBO:0108892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 5","termid":"PBO:0108892"}


id: MONDO:0011095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the TNNT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1D","secondary_identifiers":["DOID:0110426","MEDGEN:316943","GARD:15332","MESH:C563306","UMLS:C1832243","OMIM:601494"],"synonyms":[{"name":"CMD1D","type":"exact"},{"name":"TNNT2 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1D","type":"related"},{"name":"cardiomyopathy, dilated, type 1D","type":"exact"},{"name":"dilated cardiomyopathy 1D","type":"exact"},{"name":"dilated cardiomyopathy type 1D","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in TNNT2","type":"exact"},{"name":"left ventricular noncompaction 6","type":"related"}],"termid":"MONDO:0011095","xrefs":{"Monarch":{"xref_id":"0011095"}}}


id: MONDO:0022898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis intellectual disability heart defects","secondary_identifiers":["GARD:1600"],"termid":"MONDO:0022898","xrefs":{"Monarch":{"xref_id":"0022898"}}}


id: PBO:0076898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 52","termid":"PBO:0076898"}


id: PBO:0086814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YLR152C is not an essential gene","termid":"PBO:0086814"}


id: PR:Q9P7M9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rib1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.09c","synonyms":[{"name":"GTP cyclohydrolase II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rib1","type":"exact"}],"termid":"PR:Q9P7M9"}


id: GO:0000290
data:
  {"annotated_genes":["SJAG_02213","SJAG_04880","SJAG_03157","SJAG_01625","SJAG_05010","SJAG_05694"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91061,105604,109345,109394,111452,112918],"is_not":false,"summary":null,"term":"GO:0000290"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of a nuclear mRNA triggered by shortening of the poly(A) tail to below a minimum functional length.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"},{"relation_name":"is_a","term_name":"mRNA methylguanosine-cap decapping","termid":"GO:0110156"},{"relation_name":"part_of","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01625":null,"SJAG_02213":null,"SJAG_03157":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"deadenylation-dependent decapping of nuclear-transcribed mRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deadenylation-dependent decapping of nuclear mRNA","type":"exact"},{"name":"deadenylylation-dependent decapping","type":"exact"}],"termid":"GO:0000290","terms_by_termid":{"GO:0000290":null}}


id: GO:1901133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of kanamycin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"kanamycin metabolic process","termid":"GO:1901131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"kanamycin biosynthetic process","synonyms":[{"name":"kanamycin anabolism","type":"exact"},{"name":"kanamycin biosynthesis","type":"exact"},{"name":"kanamycin formation","type":"exact"},{"name":"kanamycin synthesis","type":"exact"}],"termid":"GO:1901133"}


id: MONDO:0033621
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85258],"is_not":false,"summary":null,"term":"MONDO:0033621"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy, infantile, James type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1764556","OMIM:619042","UMLS:C5436669"],"synonyms":[{"name":"SMAJI","type":"exact"}],"termid":"MONDO:0033621","terms_by_termid":{"MONDO:0033621":null},"xrefs":{"Monarch":{"xref_id":"0033621"}}}


id: GO:0052496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within the symbiont xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by host of symbiont xylem (obsolete GO:0052496)","termid":"GO:0052496"}


id: MONDO:0008658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete virus Rd114 RNA Complementarity (obsolete MONDO:0008658)","secondary_identifiers":["OMIM:193070"],"synonyms":[{"name":"virus Rd114 RNA Complementarity","type":"exact"}],"termid":"MONDO:0008658","xrefs":{"Monarch":{"xref_id":"0008658"}}}


id: MONDO:0019537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemoglobin D disease(HbD) is a hemoglobinopathy characterized by production of abnormal variant hemoglobin known as hemoglobin D, with no or mild clinical manifestations (splenomegaly, very mild anemia).","definition_xrefs":["Orphanet:90039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hemoglobin D disease","secondary_identifiers":["icd11.foundation:1508363690","DOID:5378","ICD9:282.7","NCIT:C35344","GARD:19103","MedDRA:10055019","MEDGEN:124416","SCTID:66729008","UMLS:C0272080"],"synonyms":[{"name":"Hb-D disease","type":"exact"},{"name":"hemoglobin D disease","type":"exact"}],"termid":"MONDO:0019537","xrefs":{"Monarch":{"xref_id":"0019537"}}}


id: GO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","secondary_identifiers":["EC:1.10.3.-"],"synonyms":[{"name":"laccase activity","type":"related"}],"termid":"GO:0016682"}


id: GO:0120136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dUMP = ADP + dUDP.","definition_xrefs":["RHEA:30655","PMID:3010881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP/dUMP kinase activity","termid":"GO:0009041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dUMP kinase activity","synonyms":[{"name":"ATP:dUMP phosphotransferase activity","type":"exact"},{"name":"dUMP-kinase activity","type":"exact"},{"name":"deoxyuridine monophosphate kinase activity","type":"exact"}],"termid":"GO:0120136"}


id: GO:0102060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-cis-farnesyl diphosphate = (-)-endo-alpha-bergamotene + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:30471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"endo-alpha-bergamotene synthase activity","secondary_identifiers":["MetaCyc:RXN-10482","EC:4.2.3.54"],"synonyms":[{"name":"endo-alpha-bergamontene synthase activity","type":"exact"}],"termid":"GO:0102060"}


id: GO:0031158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the size of the aggregate formed during sorocarp formation.","definition_xrefs":["GOC:mtg_sensu","GOC:mah","PMID:5002049","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aggregate size involved in sorocarp development","termid":"GO:0031157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aggregate size involved in sorocarp development","synonyms":[{"name":"down regulation of aggregate size","type":"exact"},{"name":"down-regulation of aggregate size","type":"exact"},{"name":"downregulation of aggregate size","type":"exact"},{"name":"inhibition of aggregate size","type":"narrow"}],"termid":"GO:0031158"}


id: MONDO:0013219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive hypophosphatemic rickets in which the cause of the disease is a mutation in the ENPP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive hypophosphatemic rickets","termid":"MONDO:0017324"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hypophosphatemic rickets, autosomal recessive, 2","secondary_identifiers":["GARD:18417","NORD:2000","MEDGEN:442380","OMIM:613312","UMLS:C2750078","MESH:C567647"],"synonyms":[{"name":"ARHR2","type":"related"},{"name":"Autosomal Recessive Hypophosphatemic Rickets Type 2","type":"exact"},{"name":"ENPP1 autosomal recessive hypophosphatemic rickets","type":"exact"},{"name":"autosomal recessive hypophosphatemic rickets caused by mutation in ENPP1","type":"exact"},{"name":"hypophosphatemic rickets, autosomal recessive, 2","type":"exact"},{"name":"hypophosphatemic rickets, autosomal recessive, type 2","type":"exact"}],"termid":"MONDO:0013219","xrefs":{"Monarch":{"xref_id":"0013219"}}}


id: GO:0070993
data:
  {"annotated_genes":["SJAG_02995","SJAG_04891","SJAG_02390","SJAG_02263","SJAG_02164","SJAG_03472","SJAG_04981","SJAG_02376","SJAG_02628","SJAG_03147","SJAG_03629","SJAG_03732","SJAG_00662","SJAG_01117","SJAG_04744","SJAG_04900"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104785,105071,94288,98428,95586,106483,99592,96351,97284,89448,97226,110144,110786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016282"},{"annotations":[89449,97227,105072,110145,96731,95370,99593,94289,96352,97885,104786,110787,97285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033290"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains the small ribosomal subunit, a translation initiation ternary complex (i.e. an initiator tRNA, GTP, and an IF2 or eIF2 complex), and an mRNA.","definition_xrefs":["GOC:mah","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_01117":null,"SJAG_02164":null,"SJAG_02263":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_03629":null,"SJAG_03732":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"translation preinitiation complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070993","terms_by_termid":{"GO:0016282":null,"GO:0033290":null}}


id: PBO:0027346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_menadione","termid":"PBO:0027346"}


id: GO:0072503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent cations at the level of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular divalent inorganic cation homeostasis (obsolete GO:0072503)","termid":"GO:0072503"}


id: MONDO:0022841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypotrichosis milia","termid":"MONDO:0022841","xrefs":{"Monarch":{"xref_id":"0022841"}}}


id: MONDO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biologic subset of breast carcinoma defined by high expression of genes characteristic of basal epithelial cells, including KRT5 and KRT17, annexin 8, CX3CL1, and TRIM29, and usually by lack of expression of the estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor 2 (HER2). It is the most common subtype of breast cancer associated with BRCA1 mutations, and is associated with a poor prognosis.","definition_xrefs":["NCIT:C53558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive ductal breast carcinoma","termid":"MONDO:0004953"},{"relation_name":"is_a","term_name":"triple-negative breast carcinoma","termid":"MONDO:0005494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"basal-like breast carcinoma","secondary_identifiers":["UMLS:C3642347","MEDGEN:770987","EFO:0000281"],"synonyms":[{"name":"basal-like breast cancer","type":"exact"},{"name":"basal-like breast carcinoma","type":"exact"},{"name":"basal-like subtype of breast carcinoma","type":"exact"}],"termid":"MONDO:0004984","xrefs":{"Monarch":{"xref_id":"0004984"}}}


id: PBO:0051884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITCH antisense RNA 1","termid":"PBO:0051884"}


id: CHEBI:17489
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"3',5'-cyclic purine nucleotide having having adenine as the nucleobase.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-cyclic AMP","secondary_identifiers":["CHEBI:1325","CHEBI:41588","CHEBI:11673","CHEBI:19827"],"termid":"CHEBI:17489"}


id: MONDO:1012663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in cattle due to a mutation in the ACAN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, ACAN-related, cattle","secondary_identifiers":["OMIA:001271-9913"],"synonyms":[{"name":"bulldog calf malformation","type":"related"}],"termid":"MONDO:1012663","xrefs":{"Monarch":{"xref_id":"1012663"}}}


id: GO:0021906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the formation of the hindbrain-spinal cord boundary.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","PMID:11262869","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain-spinal cord boundary formation","termid":"GO:0021906"}


id: MONDO:0000137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, megalencephalic","secondary_identifiers":["OMIMPS:604004"],"termid":"MONDO:0000137","xrefs":{"Monarch":{"xref_id":"0000137"}}}


id: GO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that inhibits the signaling function of a G protein-coupled receptor by addition of a phosphate group to its third intracellular loop consensus site.","definition_xrefs":["PMID:8396717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"part_of","term_name":"desensitization of G protein-coupled receptor signaling pathway","termid":"GO:0002029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:0002030"}


id: GO:0015087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cobalt (Co2+) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cobalt ion transmembrane transporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-141A"],"synonyms":[{"name":"cobalt, zinc uptake permease activity","type":"related"},{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"related"}],"termid":"GO:0015087"}


id: GO:0140731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of amphiregulin.","definition_xrefs":["PMID:24463227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"amphiregulin production","termid":"GO:0140730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of amphiregulin production","synonyms":[{"name":"regulation of AREG production","type":"broad"}],"termid":"GO:0140731"}


id: PBO:0070830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 9","termid":"PBO:0070830"}


id: GO:0071196
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv channel interacting protein KChIP1 associated with the channel via interaction with the Kv alpha subunit 4.3.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Kv4.3-KChIP1 channel complex","secondary_identifiers":["CORUM:3091"],"termid":"GO:0071196"}


id: PBO:0088154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Very long chain fatty acyl-CoA synthetase and fatty acid transporter; activates imported fatty acids with a preference for very long lengths (C20-C26); has a separate function in the transport of long chain fatty acids","termid":"PBO:0088154"}


id: MONDO:0015576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare viral disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare viral disease (obsolete MONDO:0015576)","secondary_identifiers":["Orphanet:163585"],"synonyms":[{"name":"rare viral disease","type":"exact"},{"name":"rare viral infectious disease","type":"exact"}],"termid":"MONDO:0015576","xrefs":{"Monarch":{"xref_id":"0015576"}}}


id: GO:0060984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac vascular smooth muscle cell that was derived from the epicardium over time, from its formation to the mature state.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac vascular smooth muscle cell development","termid":"GO:0060948"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac vascular smooth muscle cell differentiation","termid":"GO:0060983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac vascular smooth muscle cell development","termid":"GO:0060984"}


id: GO:0015920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lipopolysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A lipopolysaccharide is any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide transport","secondary_identifiers":["GO:0015921"],"synonyms":[{"name":"LPS export","type":"narrow"},{"name":"LPS transport","type":"exact"},{"name":"lipopolysaccharide export","type":"narrow"}],"termid":"GO:0015920"}


id: MONDO:0100404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly MLL gene rearrangement. (A molecular abnormality indicating rearrangement of the MLL (KMT2A) gene.)","definition_xrefs":["NCIT:C122623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, MLL gene rearrangement","secondary_identifiers":["NCIT:C174129","DOID:0081094"],"synonyms":[{"name":"AML, KMT2A Gene Rearrangement","type":"exact"},{"name":"AML, KMT2A Rearrangement","type":"exact"},{"name":"AML, Lysine (K)-Specific Methyltransferase 2A Gene Rearrangement","type":"exact"},{"name":"AML, Lysine Methyltransferase 2A Gene Rearrangement","type":"exact"},{"name":"AML, MLL Rearrangement","type":"exact"},{"name":"AML, MLL gene rearrangement","type":"exact"},{"name":"AML, Mixed Lineage Leukaemia Gene Rearrangement","type":"exact"},{"name":"AML, Mixed Lineage Leukemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid Leukaemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid Leukemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid or Mixed Lineage Leukaemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid or Mixed Lineage Leukemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid or Mixed-Lineage Leukaemia (Trithorax Homolog, Drosophila) Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila) Gene Rearrangement","type":"exact"}],"termid":"MONDO:0100404","xrefs":{"Monarch":{"xref_id":"0100404"}}}


id: GO:0072225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric late distal convoluted tubule over time, from its formation to the mature structure. The metanephric late distal convoluted tubule contains metanephric DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late distal convoluted tubule development","termid":"GO:0072068"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric late distal convoluted tubule development","termid":"GO:0072225"}


id: PBO:0011982
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poikiloderma with neutropenia","termid":"PBO:0011982"}


id: PR:Q9P7H1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:11683392","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase Clp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.09c","secondary_identifiers":["PR:000027624","UniProtKB:Q9P7H1"],"synonyms":[{"name":"CDC fourteen-like phosphatase 1","type":"exact"},{"name":"CLP1","type":"related"},{"name":"FLP1","type":"related"},{"name":"SPAC1782.09C","type":"related"},{"name":"Spom972h-clp1","type":"exact"},{"name":"tyrosine-protein phosphatase CDC14 homolog","type":"exact"}],"termid":"PR:Q9P7H1"}


id: PBO:0024847
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin binding by Cdc13 and Mcm4 is mutually exclusive","termid":"PBO:0024847"}


id: FYPO:0007244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is decreased during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during mitotic metaphase","termid":"FYPO:0003002"},{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during mitotic M phase","termid":"FYPO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during mitotic metaphase","synonyms":[{"name":"decreased protein localisation to kinetochore during mitotic metaphase","type":"exact"},{"name":"decreased protein localization to kinetochore during metaphase during mitotic cell cycle","type":"exact"},{"name":"reduced protein localization to kinetochore during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007244"}


id: PBO:0069774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1057, pseudogene","termid":"PBO:0069774"}


id: PBO:0064158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIC","termid":"PBO:0064158"}


id: PBO:0041267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q C chain","termid":"PBO:0041267"}


id: GO:0005300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the high-affinity transfer of L-tryptophan from one side of a membrane to the other. Tryptophan is 2-amino-3-(1H-indol-3-yl)propanoic acid. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan transmembrane transporter activity","termid":"GO:0015196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity tryptophan transmembrane transporter activity","synonyms":[{"name":"high-affinity tryptophan transporter activity","type":"broad"}],"termid":"GO:0005300"}


id: PBO:0089838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Syf2","termid":"PBO:0089838"}


id: GO:0009790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant.","definition_xrefs":["GOC:go_curators","GOC:isa_complete","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo development","secondary_identifiers":["Wikipedia:Embryogenesis","GO:0009795","Reactome:R-HSA-5619507"],"synonyms":[{"name":"embryogenesis","type":"exact"},{"name":"embryogenesis and morphogenesis","type":"broad"},{"name":"embryonal development","type":"exact"}],"termid":"GO:0009790"}


id: PBO:0051514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 4","termid":"PBO:0051514"}


id: GO:0007174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of epidermal growth factor (EGF), following internalization of the receptor-bound ligand into the signal-receiving cell. Full breakdown of epidermal growth factor results in a ligand that is unable to bind and activate its receptor.","definition_xrefs":["PMID:2985587","GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163","GO:0023052"],"is_obsolete":false,"name":"epidermal growth factor catabolic process","synonyms":[{"name":"EGF breakdown","type":"exact"},{"name":"EGF catabolism","type":"exact"},{"name":"EGF receptor ligand processing","type":"related"},{"name":"epidermal growth factor breakdown","type":"exact"},{"name":"epidermal growth factor catabolism","type":"exact"},{"name":"epidermal growth factor ligand processing","type":"related"},{"name":"intracellular EGF processing","type":"related"},{"name":"receptor-mediated EGF processing","type":"related"}],"termid":"GO:0007174"}


id: GO:0002246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that restore integrity to damaged tissue that contribute to an inflammatory response.","definition_xrefs":["GOC:jal","ISBN:0721601871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wound healing","termid":"GO:0042060"},{"relation_name":"part_of","term_name":"inflammatory response to wounding","termid":"GO:0090594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing involved in inflammatory response","synonyms":[{"name":"healing during inflammatory response","type":"related"},{"name":"inflammatory response wound healing","type":"related"}],"termid":"GO:0002246"}


id: GO:0015306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sialate(out) + cation(out) = sialate(in) + cation(in).","definition_xrefs":["TC:2.A.1.14.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sialate:monoatomic cation symporter activity","synonyms":[{"name":"cation/sialate symporter activity","type":"exact"},{"name":"cation:sialate symporter activity","type":"exact"},{"name":"sialate transporter activity","type":"broad"},{"name":"sialate/cation symporter activity","type":"exact"},{"name":"sialate:cation symporter activity","type":"broad"}],"termid":"GO:0015306"}


id: GO:0044457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a cell septum, a structure composed of peptidoglycan and often chitin in addition to other materials. It usually forms perpendicular to the long axis of a cell or hypha and grows centripetally from the cell wall to the center of the cell and often functions in the compartmentalization of a cell into two daughter cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell septum part (obsolete GO:0044457)","termid":"GO:0044457"}


id: SO:0000839
data:
  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id: PBO:0040431
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase copper transporting beta","termid":"PBO:0040431"}


id: GO:1903022
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands.","definition_xrefs":["GOC:rb","GOC:TermGenie","GO_REF:0000059","PMID:12192046"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands (obsolete GO:1903022)","synonyms":[{"name":"activation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"narrow"},{"name":"up regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"},{"name":"up-regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"},{"name":"upregulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"}],"termid":"GO:1903022"}


id: PBO:0074843
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 35B","termid":"PBO:0074843"}


id: PATO:0001109
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001109 absolute amplitude value (obsolete PATO:0001109)","termid":"PATO:0001109"}


id: PBO:0062587
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 2","termid":"PBO:0062587"}


id: PBO:0076968
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 2 like Y-linked","termid":"PBO:0076968"}


id: PBO:0073780
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 2","termid":"PBO:0073780"}


id: PBO:0092003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific trancription factor Pi","termid":"PBO:0092003"}


id: MONDO:0012973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 12q15.","definition_xrefs":["DOID:0110901","PMID:19122664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 26","secondary_identifiers":["OMIM:612639","MEDGEN:382561","UMLS:C2675249","MESH:C567217"],"synonyms":[{"name":"IBD26","type":"exact"},{"name":"inflammatory bowel disease 26","type":"exact"},{"name":"inflammatory bowel disease type 26","type":"exact"}],"termid":"MONDO:0012973","xrefs":{"Monarch":{"xref_id":"0012973"}}}


id: MONDO:0010003
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rowley-Rosenberg syndrome","secondary_identifiers":["OMIM:268500","UMLS:C0268426","MEDGEN:120638","MESH:C535874","SCTID:53783003"],"synonyms":[{"name":"Growth retardation, pulmonary hypertension, and amino aciduria","type":"related"},{"name":"Growth retardation, pulmonary hypertension, and aminoaciduria","type":"related"},{"name":"Rowley-Rosenberg syndrome","type":"exact"}],"termid":"MONDO:0010003","xrefs":{"Monarch":{"xref_id":"0010003"}}}


id: GO:0060425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the lung are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung morphogenesis","termid":"GO:0060425"}


id: PBO:0003423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfhydryl oxidase (predicted)","termid":"PBO:0003423"}


id: GO:0036154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of diacylglycerol, through sequential deacylation and re-acylation reactions, to generate diacylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:15364929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol acyl-chain remodeling","termid":"GO:0036155"},{"relation_name":"is_a","term_name":"diacylglycerol metabolic process","termid":"GO:0046339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"diacylglycerol acyl-chain remodeling","synonyms":[{"name":"diacylglycerol acyl-chain remodelling","type":"exact"},{"name":"diglyceride acyl-chain remodeling","type":"exact"}],"termid":"GO:0036154"}


id: PBO:0000917
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ERG20","termid":"PBO:0000917"}


id: PBO:0085716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in SRP-independent targeting of substrates to the ER; component of an alternative ER targeting pathway that has partial functional redundancy with the GET pathway; preference for substrates with downstream transmembrane domains; interacts with Env10p/Snd2p and Pho88p/Snd3p; can compensate for loss of SRP; co-purifies with ribosomes; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0085716"}


id: PBO:0067089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 125, pseudogene","termid":"PBO:0067089"}


id: FYPO:0005798
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex during vegetative growth","termid":"FYPO:0000929"},{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell cortex of cell tip during vegetative growth","synonyms":[{"name":"decreased protein localisation to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell end during vegetative growth","type":"related"},{"name":"decreased protein localization to cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip cortex during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell cortex of cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005798"}


id: MONDO:0014626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 41 is a rare autosomal dominant cerebellar ataxia type III disorder characterized by adult-onset progressive imbalance and loss of coordination associated with an ataxic gait. Mild atrophy of the cerebellar vermis has been reported on brain magnetic resonance imaging.","definition_xrefs":["Orphanet:458798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 41","secondary_identifiers":["DOID:0111744","MEDGEN:908281","GARD:17810","OMIM:616410","UMLS:C4225158"],"synonyms":[{"name":"SCA41","type":"exact"},{"name":"spinocerebellar ataxia 41","type":"related"},{"name":"spinocerebellar ataxia type 41","type":"exact"}],"termid":"MONDO:0014626","xrefs":{"Monarch":{"xref_id":"0014626"}}}


id: MONDO:0004444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of bladder carcinoma characterized by the presence of malignant glandular epithelial cells and clear cells forming a tubulo-cystic pattern.","definition_xrefs":["NCIT:C39847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder clear cell adenocarcinoma","termid":"MONDO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder tubulo-cystic clear cell adenocarcinoma","secondary_identifiers":["DOID:8050","MEDGEN:267060","UMLS:C1511203"],"synonyms":[{"name":"bladder tubulo-cystic clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0004444","xrefs":{"Monarch":{"xref_id":"0004444"}}}


id: GO:0010820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of T cell chemotaxis. T cell chemotaxis is the directed movement of a T cell in response to an external stimulus.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell chemotaxis","termid":"GO:0010819"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte chemotaxis","termid":"GO:0140131"},{"relation_name":"is_a","term_name":"positive regulation of T cell migration","termid":"GO:2000406"},{"relation_name":"positively_regulates","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell chemotaxis","termid":"GO:0010820"}


id: PBO:0058889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10526","termid":"PBO:0058889"}


id: PBO:0027476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_monensin","termid":"PBO:0027476"}


id: PBO:0027634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomeric_transcript_level","termid":"PBO:0027634"}


id: PBO:0086254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that positively regulates actin assembly; forms a homodimer and interacts with G-actin; localization to the bud neck and bud tip requires Spa2p; YFR016C is not an essential gene","termid":"PBO:0086254"}


id: GO:0017005
data:
  {"annotated_genes":["SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118374],"is_not":false,"summary":null,"term":"GO:0017005"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of 3'-phosphotyrosyl groups formed as covalent intermediates (in DNA backbone breakage) between DNA topoisomerase I and DNA.","definition_xrefs":["PMID:16751265","PMID:10521354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosyl-DNA phosphodiesterase activity","termid":"GO:0070259"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3'-tyrosyl-DNA phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017005","terms_by_termid":{"GO:0017005":null}}


id: SO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation, where it increases transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_induced","termid":"SO:0000125"},{"relation_name":"is_a","term_name":"autoregulated","termid":"SO:0000471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_autoregulated","synonyms":[{"name":"positively autoregulated","type":"exact"}],"termid":"SO:0000475"}


id: PBO:0033790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_kinetochore_sliding_during_chromosome_recapture","termid":"PBO:0033790"}


id: GO:0050084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + H2O = D-mannitol + 2 H+ + phosphate.","definition_xrefs":["EC:3.1.3.22","RHEA:19537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"mannitol-1-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R02167","MetaCyc:MANNITOL-1-PHOSPHATASE-RXN"],"synonyms":[{"name":"D-mannitol-1-phosphate phosphohydrolase activity","type":"related"},{"name":"mannitol-1-phosphate phosphatase activity","type":"related"}],"termid":"GO:0050084"}


id: PBO:0055376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2805","termid":"PBO:0055376"}


id: MONDO:0019997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare gastroenterologic disease (obsolete MONDO:0019997)","secondary_identifiers":["Orphanet:97935"],"termid":"MONDO:0019997","xrefs":{"Monarch":{"xref_id":"0019997"}}}


id: GO:0103080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(3-methylthiopropyl)malate(2-) = 3-(3'-methylthio)propylmalate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiopropylmalate isomerase activity (obsolete GO:0103080)","termid":"GO:0103080"}


id: PBO:0030939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrion_inheritance","termid":"PBO:0030939"}


id: GO:0008348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an antimicrobial humoral response.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial humoral response","termid":"GO:0002759"},{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of humoral immune response","termid":"GO:0002921"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"negatively_regulates","term_name":"antimicrobial humoral response","termid":"GO:0019730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antimicrobial humoral response","secondary_identifiers":["GO:0042154","GO:0042155"],"synonyms":[{"name":"attenuation of antimicrobial humoral response","type":"exact"},{"name":"down regulation of antimicrobial humoral response","type":"exact"},{"name":"down-regulation of antimicrobial humoral response","type":"exact"},{"name":"downregulation of antimicrobial humoral response","type":"exact"},{"name":"inhibition of antimicrobial humoral response","type":"narrow"}],"termid":"GO:0008348"}


id: PBO:0072138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 15","termid":"PBO:0072138"}


id: PBO:0047836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box R1","termid":"PBO:0047836"}


id: MONDO:0016700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anaplastic ependymoma is a rare, malignant type of ependymoma that most often arises in the supratentorial region of the brain of children and young adults and that manifests with variable symptoms including headaches, nausea, vision impairment, memory loss and difficulty walking.","definition_xrefs":["Orphanet:251646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymal tumor","termid":"MONDO:0003266"},{"relation_name":"is_a","term_name":"anaplastic cancer","termid":"MONDO:0020633"},{"relation_name":"is_a","term_name":"grade III glioma","termid":"MONDO:0021640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"anaplastic ependymoma","secondary_identifiers":["ONCOTREE:APE","MEDGEN:128891","NCIT:C6770","DOID:5889","ICDO:9392/3","GARD:10634","NCIT:C4049","UMLS:C0280788","MedDRA:10014968","DOID:5074"],"synonyms":[{"name":"WHO grade III ependymal neoplasm","type":"exact"},{"name":"WHO grade III ependymal tumor","type":"exact"},{"name":"WHO grade III ependymal tumour","type":"exact"},{"name":"anaplastic ependymal neoplasm","type":"exact"},{"name":"anaplastic ependymal tumor","type":"exact"},{"name":"anaplastic ependymal tumour","type":"exact"},{"name":"anaplastic ependymoma","type":"exact"},{"name":"ependymal tumors","type":"broad"},{"name":"ependymal tumours","type":"broad"},{"name":"ependymoma, anaplastic, malignant","type":"exact"},{"name":"ependymoma, malignant","type":"exact"},{"name":"high-grade ependymoma","type":"exact"},{"name":"malignant ependymoma","type":"exact"},{"name":"undifferentiated ependymal neoplasm","type":"exact"},{"name":"undifferentiated ependymal tumor","type":"exact"},{"name":"undifferentiated ependymal tumour","type":"exact"},{"name":"undifferentiated ependymoma","type":"exact"}],"termid":"MONDO:0016700","xrefs":{"Monarch":{"xref_id":"0016700"}}}


id: GO:1904735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fatty acid beta-oxidation using acyl-CoA dehydrogenase.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25416781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation","termid":"GO:0031998"},{"relation_name":"regulates","term_name":"fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:0033539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:1904735"}


id: MONDO:0019911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 4 is an uniparental disomy of maternal origin that most likely does not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only mother is a carrier.","definition_xrefs":["Orphanet:96180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 4 disorder","termid":"MONDO:0700011"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 4","secondary_identifiers":["UMLS:C4707719","icd11.foundation:358848660","GARD:19332","SCTID:766238001","MEDGEN:1644554"],"synonyms":[{"name":"UPD(4)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 4","type":"exact"}],"termid":"MONDO:0019911","xrefs":{"Monarch":{"xref_id":"0019911"}}}


id: PR:Q9HGP7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.08c gene.","definition_xrefs":["UniProtKB:Q9HGP7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein C212.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.08c","synonyms":[{"name":"Spom972h-SPAC212.08c","type":"exact"}],"termid":"PR:Q9HGP7"}


id: GO:0050928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"negatively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis","synonyms":[{"name":"down regulation of positive chemotaxis","type":"exact"},{"name":"down-regulation of positive chemotaxis","type":"exact"},{"name":"downregulation of positive chemotaxis","type":"exact"},{"name":"inhibition of positive chemotaxis","type":"narrow"}],"termid":"GO:0050928"}


id: GO:0019637
data:
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id: GO:0120118
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mobile transmembrane junction at the tip of the flagellum of some kinetoplastid species linking the tip of a new growing flagellum to an older flagellum.","definition_xrefs":["PMID:11641501","PMID:16954145","PMID:15075226","PMID:26820516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction","termid":"GO:0030054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"flagella connector","termid":"GO:0120118"}


id: PBO:0073301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 23","termid":"PBO:0073301"}


id: PBO:0063785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 10 pseudogene 1","termid":"PBO:0063785"}


id: GO:0002864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an acute inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"},{"relation_name":"regulates","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"}


id: PBO:0109913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 20","termid":"PBO:0109913"}


id: PBO:0085067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonfunctional homolog of Gpm1p phosphoglycerate mutase; if functional, would convert 3-phosphoglycerate to 2-phosphoglycerate in glycolysis; GPM2 has a paralog, GPM3, that arose from the whole genome duplication","termid":"PBO:0085067"}


id: GO:0042047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the W-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear tungsten ion (W) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor biosynthetic process","termid":"GO:0032324"},{"relation_name":"is_a","term_name":"W-molybdopterin cofactor metabolic process","termid":"GO:0042046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"W-molybdopterin cofactor biosynthetic process","synonyms":[{"name":"Moco biosynthesis","type":"broad"},{"name":"Moco biosynthetic process","type":"broad"},{"name":"W-molybdopterin cofactor anabolism","type":"exact"},{"name":"W-molybdopterin cofactor biosynthesis","type":"exact"},{"name":"W-molybdopterin cofactor formation","type":"exact"},{"name":"W-molybdopterin cofactor synthesis","type":"exact"}],"termid":"GO:0042047"}


id: GO:0019690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a pyrimidine deoxyribonucleoside is synthesized from another deoxyribopyrimidine nucleoside.","definition_xrefs":["GOC:mah","ISBN:0306444747","ISBN:0471394831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside interconversion","termid":"GO:0019689"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside interconversion","termid":"GO:0019690"}


id: GO:0075305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which the symbiont regulates the increase in its size or mass, or its progression from an initial condition to a later condition, on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of growth or development of symbiont on or near host (obsolete GO:0075305)","synonyms":[{"name":"modulation of growth or development of symbiont on or near host","type":"exact"},{"name":"modulation of growth or development of symbiont on or near host surface","type":"exact"}],"termid":"GO:0075305"}


id: PBO:0082555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centrin (Cdc31p)-binding protein required for SPB duplication; localizes to the half-bridge of the spindle pole body (SPB); required for progression through G(2)-M transition; phosphorylated by Cdc28p-Clb2p and by Cdc5p; dephosphorylated by Cdc14p; has similarity to Xenopus laevis XCAP-C","termid":"PBO:0082555"}


id: PBO:0113182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-binding ER protein, enriched at nucleus-vacuolar junctions (NVJ); involved in nonvesicular transfer of ceramides from ER to Golgi during ER stress; may be involved in sterol metabolism or signaling at the NVJ; contains a synaptotagmin-like-mitochondrial-lipid binding protein (SMP) domain; binds phosphatidylinositols and other lipids in a large-scale study; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0113182"}


id: PBO:0075624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRING1 pseudogene 1","termid":"PBO:0075624"}


id: PBO:0002023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Dmc1","termid":"PBO:0002023"}


id: PBO:0073054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCY1 like pseudokinase 2","termid":"PBO:0073054"}


id: MONDO:0003966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choriocarcinoma that arises from the testis and is characterized by the predominance of cytotrophoblastic and intermediate trophoblastic cells. Syncytiotrophoblastic cells are absent or not prominent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma of testis","termid":"MONDO:0003508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular monophasic choriocarcinoma","secondary_identifiers":["MEDGEN:272841","NCIT:C39935","DOID:6693","UMLS:C1515290"],"termid":"MONDO:0003966","xrefs":{"Monarch":{"xref_id":"0003966"}}}


id: MONDO:1011072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in Red shanked douc langur.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, Red shanked douc langur","secondary_identifiers":["OMIA:001033-54133"],"termid":"MONDO:1011072","xrefs":{"Monarch":{"xref_id":"1011072"}}}


id: MONDO:0013846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripartum cardiomyopathy, susceptibility to","secondary_identifiers":["OMIM:614670","UMLS:C3553406","MEDGEN:766320"],"synonyms":[{"name":"Ppcm, susceptibility to","type":"related"},{"name":"peripartum cardiomyopathy, susceptibility to","type":"exact"}],"termid":"MONDO:0013846","xrefs":{"Monarch":{"xref_id":"0013846"}}}


id: GO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via an ER pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class I molecule in the ER. Class I here refers to classical class I molecules.","definition_xrefs":["ISBN:0781735149","PMID:15771591","GOC:add","PMID:14647477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:0019885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","synonyms":[{"name":"endogenous peptide antigen processing and presentation via MHC class I via ER pathway","type":"exact"}],"termid":"GO:0002484"}


id: PBO:0086530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; located in the upstream region of PMA1; deletion leads to polyamine resistance due to downregulation of PMA1","termid":"PBO:0086530"}


id: GO:0033764
data:
  {"annotated_genes":["SJAG_03235","SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000253"},{"annotations":[109543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000252"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP, and in which one substrate is a sterol derivative.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity","termid":"GO:0016229"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02855":null,"SJAG_03235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9758682"],"termid":"GO:0033764","terms_by_termid":{"GO:0000252":null,"GO:0000253":null}}


id: PBO:0048957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein Ib platelet subunit alpha","termid":"PBO:0048957"}


id: PBO:0047641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 4","termid":"PBO:0047641"}


id: MONDO:0024632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic cell dysfunction","termid":"MONDO:0024627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"defective phagocytic cell opsonization","secondary_identifiers":["MEDGEN:585045","SCTID:234578009","UMLS:C0398733"],"synonyms":[{"name":"defective phagocytic cell opsonization","type":"exact"}],"termid":"MONDO:0024632","xrefs":{"Monarch":{"xref_id":"0024632"}}}


id: MONDO:0018069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 17q is a rare chromosomal anomaly syndrome with variable phenotype principally characterized by intellectual disability, developmental delay, short stature, craniofacial dysmorphism (incl. microcephaly, low posterior hairline, frontal bossing, bitemporal narrowing, low-set and malformed ears, flat nasal bridge, long philtrum, wide mouth with downturned corners, thin upper lip) and a short, webbed neck, as well as skeletal anomalies (e.g. brachyrhizomelia, poly-/syndactyly) and joint hyperlaxity. Cardiac, cerebral, and urogenital anomalies are also frequently associated.","definition_xrefs":["Orphanet:3379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 17","termid":"MONDO:0016967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 17q","secondary_identifiers":["MEDGEN:1635674","UMLS:C4707663","GARD:18794","SCTID:766051001"],"synonyms":[{"name":"distal duplication 17q","type":"exact"},{"name":"distal trisomy type 17q","type":"exact"},{"name":"telomeric duplication 17q","type":"exact"},{"name":"trisomy 17qter","type":"exact"}],"termid":"MONDO:0018069","xrefs":{"Monarch":{"xref_id":"0018069"}}}


id: PBO:0045446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPYD antisense RNA 2","termid":"PBO:0045446"}


id: PBO:0050570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hornerin","termid":"PBO:0050570"}


id: MONDO:0003107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant neoplasms which arise or occur within the intracranial cavity below the tentorium cerebelli. This includes neoplasms within the brain and/or surrounding spaces.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"infratentorial cancer","secondary_identifiers":["UMLS:C0751593","NCIT:C3139","MEDGEN:199689","MESH:D015192","NCIT:C4966","DOID:4706"],"synonyms":[{"name":"brain neoplasm, infratentorial","type":"broad"},{"name":"infratentorial neoplasms, malignant","type":"exact"},{"name":"malignant infratentorial neoplasm","type":"exact"},{"name":"malignant infratentorial tumor","type":"exact"},{"name":"malignant infratentorial tumors","type":"exact"},{"name":"malignant infratentorial tumour","type":"exact"},{"name":"malignant infratentorial tumours","type":"exact"}],"termid":"MONDO:0003107","xrefs":{"Monarch":{"xref_id":"0003107"}}}


id: PBO:0073976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 23 member 1","termid":"PBO:0073976"}


id: PBO:0040621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF nuclear assembly factor 1","termid":"PBO:0040621"}


id: GO:1904695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle contraction.","definition_xrefs":["GOC:rph","GOC:TermGenie","PMID:22158624","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle contraction","termid":"GO:0003056"},{"relation_name":"is_a","term_name":"positive regulation of vasoconstriction","termid":"GO:0045907"},{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle contraction","synonyms":[{"name":"activation of vascular smooth muscle contraction","type":"narrow"},{"name":"positive regulation of vascular smooth muscle contraction","type":"exact"},{"name":"up regulation of vascular smooth muscle contraction","type":"exact"},{"name":"up-regulation of vascular smooth muscle contraction","type":"exact"},{"name":"upregulation of vascular smooth muscle contraction","type":"exact"}],"termid":"GO:1904695"}


id: MONDO:0015320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Pierre Robin syndrome associated with a chromosomal anomaly (obsolete MONDO:0015320)","termid":"MONDO:0015320","xrefs":{"Monarch":{"xref_id":"0015320"}}}


id: PBO:0062676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily I member 1","termid":"PBO:0062676"}


id: GO:1900461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pseudohyphal growth by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:11046133","PMID:9987114","GOC:dgf","PMID:8710886","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"positive regulation of pseudohyphal growth","termid":"GO:2000222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter","termid":"GO:1900461"}


id: PBO:0077906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosylprotein sulfotransferase 2","termid":"PBO:0077906"}


id: MONDO:1011970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymmetrical occipital condylar dysplasia, non-human animal","secondary_identifiers":["OMIA:002422"],"termid":"MONDO:1011970","xrefs":{"Monarch":{"xref_id":"1011970"}}}


id: MONDO:0014118
data:
  {"annotated_genes":["SJAG_03889"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84564],"is_not":false,"summary":null,"term":"MONDO:0014118"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive severe congenital neutropenia","termid":"MONDO:0028226"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0006025"],"is_obsolete":false,"name":"congenital neutropenia-myelofibrosis-nephromegaly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17585","OMIM:615285","DOID:0112132","MEDGEN:815361","Orphanet:369852","UMLS:C3809031"],"synonyms":[{"name":"SCN5","type":"related"},{"name":"congenital neutropenia-bone marrow fibrosis-nephromegaly syndrome","type":"exact"},{"name":"neutropenia, severe congenital, 5, autosomal recessive","type":"related"},{"name":"vps45 deficiency","type":"exact"}],"termid":"MONDO:0014118","terms_by_termid":{"MONDO:0014118":null},"xrefs":{"Monarch":{"xref_id":"0014118"}}}


id: PBO:0088167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40 repeat-containing subunit of Set3C histone deacetylase complex; complex represses early/middle sporulation genes; antagonizes telomeric silencing; binds specifically to the Sir4p N-terminus","termid":"PBO:0088167"}


id: PR:Q9USM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coenzyme Q-binding protein COQ10 homolog A, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04486","PRO:DNx","PANTHER:PTHR12901:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q-binding protein coq10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.07","secondary_identifiers":["UniProtKB:Q9USM9"],"synonyms":[{"name":"Spom972h-COQ10A","type":"exact"}],"termid":"PR:Q9USM9"}


id: SO:0000425
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The long terminal repeat found at the five-prime end of the sequence to be inserted into the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_LTR","synonyms":[{"name":"5' LTR","type":"exact"},{"name":"5' long terminal repeat","type":"exact"},{"name":"five prime LTR","type":"exact"}],"termid":"SO:0000425"}


id: GO:0005933
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protuberance from a cell of an organism that reproduces by budding, which will grow larger and become a separate daughter cell after nuclear division, cytokinesis, and cell wall formation (when appropriate). The daughter cell may completely separate from the mother cell, or the mother and daughter cells may remain associated.","definition_xrefs":["GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cellular bud","termid":"GO:0005933"}


id: MONDO:1012025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory distress syndrome, non-human animal","termid":"MONDO:1011923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory distress syndrome, pig","secondary_identifiers":["OMIA:000101-9823"],"termid":"MONDO:1012025","xrefs":{"Monarch":{"xref_id":"1012025"}}}


id: PBO:0085276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal malate dehydrogenase; catalyzes interconversion of malate and oxaloacetate; involved in the glyoxylate cycle; mutation in human homolog MDH2 causes early-onset severe encephalopathy","termid":"PBO:0085276"}


id: GO:1905520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of presynaptic active zone assembly.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:BHF","GOC:TermGenie","PMID:15797875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of presynaptic active zone assembly","termid":"GO:1905518"},{"relation_name":"is_a","term_name":"positive regulation of presynapse assembly","termid":"GO:1905608"},{"relation_name":"positively_regulates","term_name":"presynaptic active zone assembly","termid":"GO:1904071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of presynaptic active zone assembly","synonyms":[{"name":"activation of pre-synaptic active zone assembly","type":"narrow"},{"name":"activation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"activation of pre-synaptic active zone component formation","type":"narrow"},{"name":"activation of pre-synaptic active zone formation","type":"narrow"},{"name":"activation of presynaptic active zone assembly","type":"narrow"},{"name":"activation of presynaptic active zone formation","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"positive regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone formation","type":"exact"},{"name":"positive regulation of presynaptic active zone formation","type":"exact"},{"name":"up regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"up regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"up regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"up regulation of pre-synaptic active zone formation","type":"exact"},{"name":"up regulation of presynaptic active zone assembly","type":"exact"},{"name":"up regulation of presynaptic active zone formation","type":"exact"},{"name":"up-regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"up-regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"up-regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"up-regulation of pre-synaptic active zone formation","type":"exact"},{"name":"up-regulation of presynaptic active zone assembly","type":"exact"},{"name":"up-regulation of presynaptic active zone formation","type":"exact"},{"name":"upregulation of pre-synaptic active zone assembly","type":"exact"},{"name":"upregulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"upregulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"upregulation of pre-synaptic active zone formation","type":"exact"},{"name":"upregulation of presynaptic active zone assembly","type":"exact"},{"name":"upregulation of presynaptic active zone formation","type":"exact"}],"termid":"GO:1905520"}


id: GO:0075242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of zoospore formation, a process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zoospore formation","termid":"GO:0075240"},{"relation_name":"is_a","term_name":"negative regulation of sporangiospore formation","termid":"GO:0075288"},{"relation_name":"negatively_regulates","term_name":"zoospore formation","termid":"GO:0075239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of zoospore formation","termid":"GO:0075242"}


id: PBO:0072159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 36","termid":"PBO:0072159"}


id: GO:1901030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability","termid":"GO:0035794"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway","termid":"GO:1901028"},{"relation_name":"positively_regulates","term_name":"mitochondrial outer membrane permeabilization","termid":"GO:0097345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0007005","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway","secondary_identifiers":["Reactome:R-HSA-111452","Reactome:R-HSA-114294"],"synonyms":[{"name":"activation of MOMP","type":"narrow"},{"name":"activation of mitochondrial outer membrane permeabilization","type":"narrow"},{"name":"positive regulation of MOMP","type":"exact"},{"name":"positive regulation of mitochondrial outer membrane permeabilization","type":"broad"},{"name":"up regulation of MOMP","type":"exact"},{"name":"up regulation of mitochondrial outer membrane permeabilization","type":"exact"},{"name":"up-regulation of MOMP","type":"exact"},{"name":"up-regulation of mitochondrial outer membrane permeabilization","type":"exact"},{"name":"upregulation of MOMP","type":"exact"},{"name":"upregulation of mitochondrial outer membrane permeabilization","type":"exact"}],"termid":"GO:1901030"}


id: PBO:0002137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 1","termid":"PBO:0002137"}


id: MONDO:0017280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Demodicidosis is a rare parasitic cutaneous disease due to Demodex mite infestation characterized by variable degrees of spinulosis, erythema, papules, and pustules, usually accompanied by a burning or pruritic sensation. Face (incl. eyelids) is most frequently affected, but ear canal, scalp, neck, back, chest, nipples, buttocks, penis, and extremity (legs and arms) involvement have also been observed. Dermoscopic examination reveals Demodex tails and follicular openings.","definition_xrefs":["Orphanet:283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"demodicidosis","secondary_identifiers":["GARD:1802","icd11.foundation:1473144548"],"synonyms":[{"name":"Demodex caused disease or disorder","type":"exact"},{"name":"Demodex disease or disorder","type":"exact"},{"name":"Demodex infectious disease","type":"exact"},{"name":"Demodicosis","type":"exact"},{"name":"demodectic mange","type":"exact"},{"name":"red mange","type":"exact"}],"termid":"MONDO:0017280","xrefs":{"Monarch":{"xref_id":"0017280"}}}


id: MONDO:0004315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intrahepatic cholangiocarcinoma that arises from the canals of Hering.","definition_xrefs":["NCIT:C41617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrahepatic cholangiocarcinoma","termid":"MONDO:0003210"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"cholangiolocellular carcinoma","secondary_identifiers":["DOID:7642","MEDGEN:273143","UMLS:C1516490"],"synonyms":[{"name":"CLC","type":"exact"},{"name":"cholangiocarcinoma of intralobular bile duct","type":"exact"},{"name":"cholangiolocellular carcinoma","type":"exact"},{"name":"intralobular bile duct cholangiocarcinoma","type":"exact"}],"termid":"MONDO:0004315","xrefs":{"Monarch":{"xref_id":"0004315"}}}


id: PBO:0057556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 671","termid":"PBO:0057556"}


id: GO:0009746
data:
  {"annotated_genes":["SJAG_00574","SJAG_04026","SJAG_01699","SJAG_03081","SJAG_04312","SJAG_00472","SJAG_01254","SJAG_01754","SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108471,108977,116006,105373,101338,93734,114974,106311,105962],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hexose stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hexose","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to hexose stimulus","type":"exact"}],"termid":"GO:0009746","terms_by_termid":{"GO:0010619":null}}


id: GO:0006775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"fat-soluble vitamin metabolic process","secondary_identifiers":["Reactome:R-HSA-6806667"],"synonyms":[{"name":"fat-soluble vitamin metabolism","type":"exact"}],"termid":"GO:0006775"}


id: GO:1901809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of capsanthin.","definition_xrefs":["GOC:TermGenie","MetaCyc:PWY-5174","UniPathway:UPA00806","GOC:yaf","PMID:10995282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"capsanthin metabolic process","termid":"GO:1901807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"capsanthin biosynthetic process","synonyms":[{"name":"capsanthin anabolism","type":"exact"},{"name":"capsanthin biosynthesis","type":"exact"},{"name":"capsanthin formation","type":"exact"},{"name":"capsanthin synthesis","type":"exact"}],"termid":"GO:1901809"}


id: GO:1903207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of hydrogen peroxide-induced neuron death.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hydrogen peroxide-induced neuron death (obsolete GO:1903207)","synonyms":[{"name":"regulation of neuron death in response to H2O2","type":"exact"},{"name":"regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"}],"termid":"GO:1903207"}


id: PBO:0083039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta subunit of the coatomer complex (COPI); COPI coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER","termid":"PBO:0083039"}


id: MONDO:0970957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of extramedullary conus region spinal cord lipoma characterized by its location, extending from the poorly delineated tip of the conus.","definition_xrefs":["Orphanet:645288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extramedullary conus spinal cord lipoma","termid":"MONDO:0968987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"terminal extramedullary conus spinal cord lipoma","secondary_identifiers":["MEDGEN:1853126","UMLS:C5816727"],"termid":"MONDO:0970957","xrefs":{"Monarch":{"xref_id":"0970957"}}}


id: GO:0018600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-pinene + O2 + 2 H+ + 2 e- = H2O + myrtenol.","definition_xrefs":["UM-BBD_reactionID:r0709"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-pinene dehydrogenase activity (obsolete GO:0018600)","termid":"GO:0018600"}


id: GO:0021744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal motor nucleus of the vagus nerve over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:curators","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve development","termid":"GO:0021744"}


id: MONDO:0019170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyarteritis nodosa (PAN) is a rare, clinically heterogeneous, rheumatologic disease characterized by necrotizing inflammatory lesions affecting small- and medium-sized blood vessels. PAN most commonly affects skin, joints, peripheral nerves, the gut, and the kidney.","definition_xrefs":["Orphanet:767"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic inflammatory disease associated with an acquired peripheral neuropathy (obsolete MONDO:0016177)","termid":"MONDO:0016177"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarteritis nodosa","secondary_identifiers":["NANDO:2200425","MEDGEN:14681","NORD:1588","NANDO:1200261","SCTID:155441006","icd11.foundation:1419332129","MESH:D010488","NCIT:C26847","MedDRA:10036024","UMLS:C0031036","GARD:7360","ICD9:446.0","DOID:9810","ICD10CM:M30.0"],"synonyms":[{"name":"Küssmaul-Maier disease","type":"exact"},{"name":"PAN","type":"exact"},{"name":"classic polyarteritis nodosa","type":"exact"},{"name":"classical polyarteritis nodosa","type":"exact"},{"name":"panarteritis nodosa","type":"exact"},{"name":"periarteritis","type":"related"},{"name":"periarteritis nodosa","type":"exact"},{"name":"polyarteritis","type":"related"},{"name":"polyarteritis nodosa","type":"exact"}],"termid":"MONDO:0019170","xrefs":{"Monarch":{"xref_id":"0019170"}}}


id: PBO:0000591
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains CDRE","termid":"PBO:0000591"}


id: MONDO:0035557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intermediate atrioventricular septal defect (obsolete MONDO:0035557)","secondary_identifiers":["Orphanet:576242"],"termid":"MONDO:0035557","xrefs":{"Monarch":{"xref_id":"0035557"}}}


id: GO:0015898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement amiloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Amiloride is a potent and specific inhibitor of sodium ion entry into cells. It is used as a potassium-sparing diuretic.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete amiloride transport (obsolete GO:0015898)","termid":"GO:0015898"}


id: PBO:0055634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3073","termid":"PBO:0055634"}


id: PBO:0086570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YPL261C is not an essential gene; partially overlaps verified ORF YPL260W","termid":"PBO:0086570"}


id: PBO:0062316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 1","termid":"PBO:0062316"}


id: GO:0070205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate = (1R,6R)-2-succinyl-6-hydroxycyclohexa-2,4-diene-1-carboxylate + pyruvate.","definition_xrefs":["EC:4.2.99.20","RHEA:25597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","secondary_identifiers":["MetaCyc:RXN-9310","KEGG_REACTION:R08166"],"synonyms":[{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase activity","type":"related"},{"name":"6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate synthase activity","type":"related"},{"name":"MenH","type":"related"},{"name":"SHCHC synthase activity","type":"related"},{"name":"YfbB","type":"related"}],"termid":"GO:0070205"}


id: PATO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A force which relative high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased force","synonyms":[{"name":"increased force amplitude","type":"exact"}],"termid":"PATO:0002245"}


id: MONDO:0000401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital bile acid synthesis defect (obsolete MONDO:0000401)","termid":"MONDO:0000401","xrefs":{"Monarch":{"xref_id":"0000401"}}}


id: PBO:0068881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 121, pseudogene","termid":"PBO:0068881"}


id: GO:0036514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemotaxis process that directs the migration of an axon growth cone of a dopaminergic neuron to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:21106844","PMID:23517308","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopaminergic neuron axon guidance","synonyms":[{"name":"DA axon guidance","type":"exact"},{"name":"dopaminergic axon guidance","type":"exact"},{"name":"mdDA axon guidance","type":"exact"}],"termid":"GO:0036514"}


id: PBO:0041732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase IV","termid":"PBO:0041732"}


id: GO:1904554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemotaxis to arachidonic acid.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16382163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of chemotaxis to arachidonate","termid":"GO:1904552"},{"relation_name":"positively_regulates","term_name":"chemotaxis to arachidonate","termid":"GO:0034670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemotaxis to arachidonate","synonyms":[{"name":"activation of chemotaxis to arachidonic acid","type":"narrow"},{"name":"positive regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"up regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"up-regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"upregulation of chemotaxis to arachidonic acid","type":"exact"}],"termid":"GO:1904554"}


id: PBO:0056704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meis homeobox 3 pseudogene 2","termid":"PBO:0056704"}


id: PBO:0088196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcription factor involved in arginine-responsive genes; Zn(2)-Cys(6) binuclear cluster domain type; involved in the regulation of arginine-responsive genes; acts with Arg80p and Arg82p","termid":"PBO:0088196"}


id: GO:0034692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that comprises three core spliceosomal proteins, designated E, F, and G. Formation of the E.F.G complex is essential but not sufficient for the formation of a stable U1 snRNP complex.","definition_xrefs":["PMID:8641291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"E.F.G complex","termid":"GO:0034692"}


id: GO:0072681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a thymocyte through distinct intrathymic niches (e.g. medulla, cortex), where it receives a unique set of developmental cues required for T-cell development, dependent on fibronectin in the extracellular matrix.","definition_xrefs":["CL:0000893","PMID:20856819","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-dependent thymocyte migration","termid":"GO:0072680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibronectin-dependent thymocyte migration","synonyms":[{"name":"fibronectin-dependent immature T cell migration","type":"related"},{"name":"fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"fibronectin-dependent immature T-cell migration","type":"related"},{"name":"fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:0072681"}


id: GO:0046043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving TDP, ribosylthymine diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"TDP metabolic process","synonyms":[{"name":"TDP metabolism","type":"exact"}],"termid":"GO:0046043"}


id: MONDO:0007427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness with anhidrotic ectodermal dysplasia","secondary_identifiers":["MESH:C565119","OMIM:125050","UMLS:C1852279","MEDGEN:342202"],"synonyms":[{"name":"deafness with anhidrotic ectodermal dysplasia","type":"exact"}],"termid":"MONDO:0007427","xrefs":{"Monarch":{"xref_id":"0007427"}}}


id: PBO:0061208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodal growth differentiation factor","termid":"PBO:0061208"}


id: MONDO:0003170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytic tumor affecting young people. Morphologically, it is characterized by the presence of collagenous tissue surrounding neoplastic astrocytes. In some cases the collagen is produced by the tumor cells (desmoplastic astrocytoma), whereas in others it is produced by mesenchymal cells (mixed glioma/fibroma).","definition_xrefs":["NCIT:C5419"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"astrocytoma (excluding glioblastoma)","termid":"MONDO:0019781"},{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gliofibroma","secondary_identifiers":["DOID:4856","ICDO:9442/1","MEDGEN:226850","UMLS:C1266178"],"synonyms":[{"name":"gliofibroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003170","xrefs":{"Monarch":{"xref_id":"0003170"}}}


id: PBO:0079698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBL7 divergent transcript","termid":"PBO:0079698"}


id: GO:0038053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with estrogen and transmitting the signal to the transcriptional machinery by binding to an RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. For example, estrogen-bound receptors can bind to transcription factor complexes to regulate transcription of genes whose promoters do not contain estrogen response elements.","definition_xrefs":["GOC:signaling","PMID:17615392"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, estrogen-activated RNA polymerase II transcription factor binding (obsolete GO:0038053)","synonyms":[{"name":"estrogen nuclear receptor activity","type":"broad"},{"name":"estrogen-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0038053"}


id: PBO:0072522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 51","termid":"PBO:0072522"}


id: GO:0042857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine).","definition_xrefs":["PMID:8837459","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"chrysobactin metabolic process","synonyms":[{"name":"chrysobactin metabolism","type":"exact"}],"termid":"GO:0042857"}


id: PBO:0087228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Secreted alpha-galactosidase; required for catabolic conversion of melibiose to glucose and galactose; regulated by several GAL genes","termid":"PBO:0087228"}


id: MONDO:1012243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal dystrophy, non-human animal","termid":"MONDO:1011980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dystrophy, domestic cat","secondary_identifiers":["OMIA:000869-9685"],"termid":"MONDO:1012243","xrefs":{"Monarch":{"xref_id":"1012243"}}}


id: GO:0060019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells of the neural tube give rise to radial glial cells, specialized bipotential progenitors cells of the brain. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glial cell differentiation","termid":"GO:0060019"}


id: PBO:0071541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 6","termid":"PBO:0071541"}


id: PBO:0089034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane malate/succinate:proton symporter Mae1","termid":"PBO:0089034"}


id: PBO:0067867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 169","termid":"PBO:0067867"}


id: GO:0042654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ecdysis-triggering hormone to initiate a change in cell activity.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"ecdysis-triggering hormone receptor activity","synonyms":[{"name":"ETH receptor","type":"exact"},{"name":"ecdysis-triggering hormone binding","type":"narrow"}],"termid":"GO:0042654"}


id: GO:1901587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of acid-sensing ion channel activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of acid-sensing ion channel activity (obsolete GO:1901587)","synonyms":[{"name":"activation of ASIC activity","type":"exact"},{"name":"activation of acid-sensing ion channel activity","type":"narrow"},{"name":"positive regulation of ASIC activity","type":"exact"},{"name":"up regulation of ASIC activity","type":"exact"},{"name":"up regulation of acid-sensing ion channel activity","type":"exact"},{"name":"up-regulation of ASIC activity","type":"exact"},{"name":"up-regulation of acid-sensing ion channel activity","type":"exact"},{"name":"upregulation of ASIC activity","type":"exact"},{"name":"upregulation of acid-sensing ion channel activity","type":"exact"}],"termid":"GO:1901587"}


id: PBO:0042295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD5 molecule","termid":"PBO:0042295"}


id: GO:0018722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-phenanthrol + X-SO3(-) = HX + 1-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phenanthrol sulfotransferase activity (obsolete GO:0018722)","synonyms":[{"name":"1-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018722"}


id: GO:1901581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of telomeric RNA transcription from RNA pol II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of telomeric RNA transcription from RNA pol II promoter (obsolete GO:1901581)","synonyms":[{"name":"down regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"down regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"down-regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"down-regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"downregulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"downregulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"inhibition of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"inhibition of telomeric RNA transcription from RNA pol II promoter","type":"narrow"},{"name":"negative regulation of telomeric RNA transcription from Pol II promoter","type":"exact"}],"termid":"GO:1901581"}


id: PBO:0074109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 1 (Augustine blood group)","termid":"PBO:0074109"}


id: PBO:0031697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_nuclear_fusion_during_mating","termid":"PBO:0031697"}


id: GO:0102983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-xylose + a homogalacturonan = UDP + 4 H+ + a xylogalacturonan.","definition_xrefs":["GOC:pz","EC:2.4.2.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"xylogalacturonan beta-1,3-xylosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9589"],"termid":"GO:0102983"}


id: MONDO:0006905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, small and slightly elevated brown or black skin lesion with usually well-demarcated borders. It is characterized by the presence of a melanocytic proliferation resulting in the formation of uniform cellular nests. Sometimes the clinical and morphologic features may be difficult to distinguish from melanoma.","definition_xrefs":["NCIT:C4751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pigmented spindle cell nevus","secondary_identifiers":["SCTID:254812004","MEDGEN:105378","MESH:D018331","UMLS:C0474967"],"synonyms":[{"name":"spindle cell Nevus of Reed","type":"exact"}],"termid":"MONDO:0006905","xrefs":{"Monarch":{"xref_id":"0006905"}}}


id: PBO:0081508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 415","termid":"PBO:0081508"}


id: FYPO:0005563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are longer and thicker than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PomBase:mah","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thick stable microtubule bundle","termid":"FYPO:0005559"},{"relation_name":"is_a","term_name":"long stable microtubule bundle","termid":"FYPO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"long, thick stable microtubule bundle","synonyms":[{"name":"elongated, thick stable microtubule bundle","type":"exact"},{"name":"increased stable microtubule bundle length and thickness","type":"exact"},{"name":"long, thick Q-MT bundles","type":"exact"},{"name":"long, thick quiescent cell MT bundle","type":"exact"},{"name":"long, thick quiescent cell microtubule bundle","type":"exact"},{"name":"long, thick stable microtubule array","type":"related"},{"name":"long, thick static microtubule bundle","type":"exact"}],"termid":"FYPO:0005563"}


id: GO:0070904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of L-ascorbic acid from one side of an epithelium to the other.","definition_xrefs":["GOC:mah","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete transepithelial L-ascorbic acid transport (obsolete GO:0070904)","synonyms":[{"name":"transepithelial L-ascorbate transport","type":"exact"},{"name":"transepithelial vitamin C transport","type":"exact"}],"termid":"GO:0070904"}


id: FYPO:0008229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phosphate (Pi). Cells stop growing (and may die) at a concentration of phosphate that allows wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to phosphate (Pi)","termid":"FYPO:0008229"}


id: GO:0016844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha(S)-strictosidine + H2O = secologanin + tryptamine.","definition_xrefs":["RHEA:15013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"strictosidine synthase activity","secondary_identifiers":["KEGG_REACTION:R03738","MetaCyc:STRICTOSIDINE-SYNTHASE-RXN","EC:3.5.99.13"],"synonyms":[{"name":"3-alpha(S)-strictosidine tryptamine-lyase (secologanin-forming)","type":"related"},{"name":"3-alpha(S)-strictosidine tryptamine-lyase activity","type":"related"},{"name":"STR activity","type":"related"},{"name":"strictosidine synthetase activity","type":"related"}],"termid":"GO:0016844"}


id: PBO:0060258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYD88 innate immune signal transduction adaptor","termid":"PBO:0060258"}


id: PBO:0076633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 1 Y-linked","termid":"PBO:0076633"}


id: GO:0033385
data:
  {"annotated_genes":["SJAG_03352","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99096,108940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving geranylgeranyl diphosphate, a polyprenol compound involved in the biosynthesis of a variety of terpenoids including chlorophylls, carotenoids, tocopherols, plastoquinones, and the plant hormones gibberellins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"geranylgeranyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"geranylgeranyl diphosphate metabolism","type":"exact"},{"name":"geranylgeranyldiphosphate metabolic process","type":"exact"}],"termid":"GO:0033385","terms_by_termid":{"GO:0033386":null}}


id: SO:0002172
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_alteration where the source of the alteration is due to an artifact in the base-calling or assembly process.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_alteration_artifact","synonyms":[{"name":"sequence alteration artifact","type":"exact"}],"termid":"SO:0002172"}


id: PBO:0081650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 575","termid":"PBO:0081650"}


id: PBO:0109015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 16, pseudogene","termid":"PBO:0109015"}


id: GO:0051399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of an arginine residue from the N-terminal of an oligopeptide or polypeptide chain.","definition_xrefs":["PMID:12799365","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal arginine aminopeptidase activity (obsolete GO:0051399)","synonyms":[{"name":"N-terminal arginine aminopeptidase activity","type":"exact"},{"name":"arginine aminopeptidase activity","type":"broad"},{"name":"argininyl aminopeptidase activity","type":"broad"}],"termid":"GO:0051399"}


id: GO:1990867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gastrin stimulus.","definition_xrefs":["PMID:10348814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gastrin","termid":"GO:1990867"}


id: PATO:0000945
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's exhibiting a downward bending of its leaves or other plant parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epinastic","termid":"PATO:0000945"}


id: SO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which a change has occurred within the exonic region of the splice site, 1-2 bases from boundary.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_region_variant","termid":"SO:0001630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonic_splice_region_variant","synonyms":[{"name":"ANNOVAR:exonic;splicing","type":"exact"},{"name":"Seattleseq:coding-near-splice","type":"related"},{"name":"exonic splice region variant","type":"exact"}],"termid":"SO:0002084"}


id: MONDO:0858998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesomelic dysplasia-digital anomalies-intellectual disability syndrome","secondary_identifiers":["Orphanet:632603","MEDGEN:1843408","UMLS:C5816803"],"termid":"MONDO:0858998","xrefs":{"Monarch":{"xref_id":"0858998"}}}


id: MONDO:0032526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia 48","secondary_identifiers":["MEDGEN:1648409","Orphanet:631103","UMLS:C4748158","OMIM:618093","DOID:0111746"],"synonyms":[{"name":"SCA48","type":"related"},{"name":"SPINOCEREBELLAR ATAXIA 48","type":"related"}],"termid":"MONDO:0032526","xrefs":{"Monarch":{"xref_id":"0032526"}}}


id: PBO:0012567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 2 (predicted)","termid":"PBO:0012567"}


id: PR:Q10286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proton myo-inositol cotransporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.15","secondary_identifiers":["UniProtKB:Q10286"],"synonyms":[{"name":"SPAC4F8.15","type":"related"},{"name":"Spom972h-SLC2A13","type":"exact"}],"termid":"PR:Q10286"}


id: MONDO:0007969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The Melkersson-Rosenthal syndrome is a rare disorder characterized by a triad of recurrent orofacial swelling, relapsing facial paralysis and fissured tongue and onset in childhood or early adolescence. It has an estimated incidence of 8/10,000. The etiology is unknown but hereditary predisposition is suspected.","definition_xrefs":["Orphanet:2483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"cheilitis","termid":"MONDO:0002102"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Melkersson-Rosenthal syndrome","secondary_identifiers":["NCIT:C84886","UMLS:C0025235","MESH:D008556","EFO:1001039","OMIM:155900","GARD:7010","DOID:1761","MedDRA:10027166","NORD:1429","MEDGEN:6291"],"synonyms":[{"name":"MRS","type":"related"},{"name":"Melkersson syndrome","type":"related"},{"name":"Melkersson's syndrome","type":"exact"},{"name":"Melkersson-Rosenthal syndrome","type":"exact"},{"name":"Mros","type":"related"},{"name":"cheilitis Granulomatosa","type":"related"},{"name":"cheilitis granulomatosa of Mescher-Melkersson-Rosenthal","type":"exact"}],"termid":"MONDO:0007969","xrefs":{"Monarch":{"xref_id":"0007969"}}}


id: PBO:0088108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uroporphyrinogen III synthase; catalyzes the conversion of hydroxymethylbilane to uroporphyrinogen III, the fourth step in heme biosynthesis; deficiency in the human homolog can result in the disease congenital erythropoietic porphyria","termid":"PBO:0088108"}


id: GO:0048265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli.","definition_xrefs":["GOC:jid","PMID:12723742","PMID:10203867","PMID:12843304","Wikipedia:Pain"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal response to stress","termid":"GO:0033555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pain","secondary_identifiers":["GO:0048267"],"synonyms":[{"name":"physiological response to pain","type":"exact"}],"termid":"GO:0048265"}


id: PBO:0069172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 425, pseudogene","termid":"PBO:0069172"}


id: GO:2000016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of determination of dorsal identity.","definition_xrefs":["GOC:BHF","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of determination of dorsal identity","termid":"GO:2000015"},{"relation_name":"negatively_regulates","term_name":"determination of dorsal identity","termid":"GO:0048263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of determination of dorsal identity","synonyms":[{"name":"negative regulation of determination of adaxial identity","type":"related"}],"termid":"GO:2000016"}


id: GO:0102602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 16beta-hydroxy-beta-amyrin + O2 + H+ + NAD(P)H = 12,13beta-epoxy-16beta-hydroxy-beta-amyrin + H2O + NAD(P).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome P450 dependent 16beta-hydroxy-beta-amyrin epoxidase activity (obsolete GO:0102602)","termid":"GO:0102602"}


id: PBO:0040979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOC cell adhesion associated, oncogene regulated","termid":"PBO:0040979"}


id: MONDO:0007307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sensorineural peripheral polyneuropathy affecting approximately 1 in 2,500 individuals, and is the most common inherited disorder of the peripheral nervous system. Autosomal dominant, autosomal recessive, and X-linked forms have been recognized.","definition_xrefs":["OMIM:118200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease dominant intermediate D","termid":"MONDO:0011909"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1B","secondary_identifiers":["icd11.foundation:1632280319","MEDGEN:124377","NCIT:C118782","UMLS:C0270912","DOID:0110152","GARD:1246","Orphanet:101082"],"synonyms":[{"name":"CMT 1B","type":"related"},{"name":"CMT1B","type":"exact"},{"name":"Charcot Marie Tooth disease type 1B","type":"related"},{"name":"Charcot-Marie-Tooth disease slow nerve conduction type linked to Duffy","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 1 caused by mutation in MPZ","type":"exact"},{"name":"Charcot-Marie-Tooth disease, autosomal dominant, with focally folded myelin sheaths, type 1B","type":"related"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1B","type":"related"},{"name":"Charcot-Marie-Tooth disease, slow nerve conduction type, linked to Duffy","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1B","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1B","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1B","type":"related"},{"name":"HMSN 1B","type":"related"},{"name":"HMSN IB","type":"exact"},{"name":"HMSN1","type":"related"},{"name":"HMSN1B","type":"exact"},{"name":"MPZ Charcot-Marie-Tooth disease type 1","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease with focally folded myelin sheaths type 1B","type":"exact"},{"name":"hereditary motor and sensory neuropathy 1","type":"related"},{"name":"hereditary motor and sensory neuropathy 1B","type":"related"},{"name":"hereditary motor and sensory neuropathy IB","type":"exact"}],"termid":"MONDO:0007307","xrefs":{"Monarch":{"xref_id":"0007307"}}}


id: GO:0047540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoate + NAD+ = 2-butenoate + NADH + H+.","definition_xrefs":["MetaCyc:2-ENOATE-REDUCTASE-RXN","EC:1.3.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-enoate reductase activity","secondary_identifiers":["RHEA:10200"],"synonyms":[{"name":"butanoate:NAD+ delta2-oxidoreductase activity","type":"related"},{"name":"enoate reductase activity","type":"related"}],"termid":"GO:0047540"}


id: MONDO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare malignant adipose tissue neoplasm that arises from the bone.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteosarcoma","termid":"MONDO:0009807"},{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"liposarcoma of bone","secondary_identifiers":["NCIT:C7598","DOID:3381","UMLS:C1332581","MEDGEN:231450"],"synonyms":[{"name":"bone liposarcoma","type":"exact"},{"name":"bone tissue liposarcoma","type":"exact"},{"name":"liposarcoma of bone","type":"exact"},{"name":"liposarcoma of bone tissue","type":"exact"},{"name":"liposarcoma of the bone","type":"exact"}],"termid":"MONDO:0002634","xrefs":{"Monarch":{"xref_id":"0002634"}}}


id: FYPO:0002357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is normal (i.e. indistinguishable from wild type). One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"protein-RNA interaction phenotype","termid":"FYPO:0002131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal protein-RNA interaction","synonyms":[{"name":"normal RNA binding","type":"exact"},{"name":"normal RNA-protein interaction","type":"exact"}],"termid":"FYPO:0002357"}


id: GO:0052427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in symbiont peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont peptidase activity (obsolete GO:0052427)","synonyms":[{"name":"modulation by host of symbiont protease activity","type":"narrow"}],"termid":"GO:0052427"}


id: MONDO:0100319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A inflammatory syndrome in adults infected by the SARS-CoV-2 with severe illness requiring hospitalization in a person aged ≥21 years; a positive test result for current or previous SARS-CoV-2 infection (nucleic acid, antigen, or antibody) during admission or in the previous 12 weeks; severe dysfunction of one or more extrapulmonary organ systems (e.g., hypotension or shock, cardiac dysfunction, arterial or venous thrombosis or thromboembolism, or acute liver injury); laboratory evidence of severe inflammation (e.g., elevated CRP, ferritin, D-dimer, or interleukin-6); and absence of severe respiratory illness (to exclude patients in which inflammation and organ dysfunction might be attributable simply to tissue hypoxia).","definition_xrefs":["PMID:33031361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multisystem inflammatory syndrome in children and adults","termid":"MONDO:0035375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COVID-19–associated multisystem inflammatory syndrome in adults","synonyms":[{"name":"MIS-A","type":"exact"}],"termid":"MONDO:0100319","xrefs":{"Monarch":{"xref_id":"0100319"}}}


id: GO:1903286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of potassium ion import.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie","PMID:10636900","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"regulates","term_name":"potassium ion import across plasma membrane","termid":"GO:1990573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of potassium ion import","synonyms":[{"name":"regulation of potassium import","type":"exact"},{"name":"regulation of potassium ion uptake","type":"exact"}],"termid":"GO:1903286"}


id: PBO:0050457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homer scaffold protein 3","termid":"PBO:0050457"}


id: PBO:0089858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER heat shock protein Lsh1","termid":"PBO:0089858"}


id: MONDO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to recognize visual scenes or classes of objects but retain the ability to describe them.","definition_xrefs":["DOID:0060136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual agnosia","termid":"MONDO:0000685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"associative visual agnosia","synonyms":[{"name":"associative agnosia","type":"related"}],"termid":"MONDO:0000666","xrefs":{"Monarch":{"xref_id":"0000666"}}}


id: PBO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad6 homolog, ubiquitin conjugating enzyme E2 Rhp6","termid":"PBO:0000269"}


id: GO:0044435
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a plastid, a member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid part (obsolete GO:0044435)","termid":"GO:0044435"}


id: PR:Q09774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit g, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.07c","synonyms":[{"name":"ATPase subunit g (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-atp20","type":"exact"}],"termid":"PR:Q09774"}


id: PBO:0004964
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.10","termid":"PBO:0004964"}


id: PBO:0038517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 2","termid":"PBO:0038517"}


id: GO:0046110
data:
  {"annotated_genes":["SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"xanthine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"xanthine metabolism","type":"exact"}],"termid":"GO:0046110","terms_by_termid":{"GO:0009115":null}}


id: PBO:0053470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 434","termid":"PBO:0053470"}


id: PBO:0043429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 1","termid":"PBO:0043429"}


id: MONDO:0002990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, well-circumscribed, pseudo-encapsulated benign fibrous histiocytoma that arises entirely within the subcutaneous tissue or deep soft tissue. It usually affects the extremities or the head and neck region. It recurs locally in a minority of cases.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immune system organ benign neoplasm","termid":"MONDO:0000630"},{"relation_name":"is_a","term_name":"benign fibrous histiocytoma","termid":"MONDO:0002989"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign deep fibrous histiocytoma","secondary_identifiers":["DOID:4419","MEDGEN:690110","NCIT:C6492","UMLS:C1266125"],"synonyms":[{"name":"benign deep fibrous histiocytoma","type":"exact"},{"name":"deep benign fibrous histiocytoma","type":"exact"}],"termid":"MONDO:0002990","xrefs":{"Monarch":{"xref_id":"0002990"}}}


id: PBO:0078914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 3-3","termid":"PBO:0078914"}


id: PBO:0039065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGK pseudogene 2","termid":"PBO:0039065"}


id: PBO:0054309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1701","termid":"PBO:0054309"}


id: FYPO:0004903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell separation after cytokinesis RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Cell separation after cytokinesis RNAs are transcribed from genes whose products are involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25530312","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of cell separation after cytokinesis gene mRNA during vegetative growth","synonyms":[{"name":"decreased cell separation after cytokinesis gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of cell separation after cytokinesis gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of cell separation after cytokinesis gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of cell separation after cytokinesis gene transcripts during vegetative growth","type":"exact"},{"name":"decreased level of cytokinetic cell separation gene mRNA during vegetative growth","type":"related"},{"name":"reduced level of cell separation after cytokinesis gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004903"}


id: MONDO:0004123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete laryngeal small cell carcinoma (obsolete MONDO:0004123)","termid":"MONDO:0004123","xrefs":{"Monarch":{"xref_id":"0004123"}}}


id: MONDO:0008518
data:
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id: PBO:0017503
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id: GO:0006550
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id: MONDO:1012122
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id: PBO:0065829
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id: MOD:00152
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id: PBO:0081298
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id: FYPO:0002495
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id: GO:0006574
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id: PBO:0046533
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id: PBO:0002252
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id: GO:0055086
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id: PBO:0043952
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id: GO:0003273
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id: MONDO:0006855
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obstruction of the flow in the splanchnic circulation by atherosclerosis; embolism; thrombosis; stenosis; trauma; and compression or intrinsic pressure from adjacent tumors. Rare causes are drugs, intestinal parasites, and vascular immunoinflammatory diseases such as periarteritis nodosa and thromboangiitis obliterans. (From Juergens et al., Peripheral Vascular Diseases, 5th ed, pp295-6)","definition_xrefs":["MESH:D008641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vascular disease","termid":"MONDO:0005294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenteric vascular occlusion","secondary_identifiers":["DOID:13252","MedDRA:10074583","EFO:1001043","MEDGEN:9972","UMLS:C0025472"],"termid":"MONDO:0006855","xrefs":{"Monarch":{"xref_id":"0006855"}}}


id: GO:0034996
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id: PBO:0078936
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id: GO:0004417
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id: PBO:0079779
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id: SO:0002374
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id: PBO:0052203
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id: PBO:0090025
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id: PBO:0005814
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id: MONDO:0000805
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a snail food product.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete snail allergy (obsolete MONDO:0000805)","secondary_identifiers":["DOID:0060530"],"synonyms":[{"name":"allergy of snail food product","type":"exact"},{"name":"snail food product allergic disease","type":"exact"}],"termid":"MONDO:0000805","xrefs":{"Monarch":{"xref_id":"0000805"}}}


id: MONDO:0014324
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pachyonychia congenita in which the cause of the disease is a mutation in the KRT6A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pachyonychia congenita","termid":"MONDO:0016471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita 3","secondary_identifiers":["MEDGEN:811523","UMLS:C3714948","OMIM:615726","GARD:16005"],"synonyms":[{"name":"KRT6A pachyonychia congenita","type":"exact"},{"name":"PC3","type":"related"},{"name":"pachyonychia congenita 3","type":"exact"},{"name":"pachyonychia congenita caused by mutation in KRT6A","type":"exact"},{"name":"pachyonychia congenita type 3","type":"exact"}],"termid":"MONDO:0014324","xrefs":{"Monarch":{"xref_id":"0014324"}}}


id: MONDO:0958176
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id: FYPO:0003596
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id: GO:1900596
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-kotanin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"(+)-kotanin metabolic process","termid":"GO:1900594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(+)-kotanin biosynthetic process","synonyms":[{"name":"(+)-kotanin anabolism","type":"exact"},{"name":"(+)-kotanin biosynthesis","type":"exact"},{"name":"(+)-kotanin formation","type":"exact"},{"name":"(+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900596"}


id: PBO:0070306
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 12","termid":"PBO:0070306"}


id: PBO:0055475
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2908","termid":"PBO:0055475"}


id: PBO:0029062
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vacuoles_during_stationary_phase","termid":"PBO:0029062"}


id: GO:1900350
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from methylamine","synonyms":[{"name":"activation of methane biosynthetic process from methylamine","type":"narrow"},{"name":"up regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"up-regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"upregulation of methane biosynthetic process from methylamine","type":"exact"}],"termid":"GO:1900350"}


id: GO:0070912
data:
  {"annotated_genes":["SJAG_03454","SJAG_04540"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90374,110600],"is_not":false,"summary":null,"term":"GO:0070912"}]},"cv_name":"cellular_component","definition":"A heterodimeric nucleotide-excision repair complex that is involved in transcription-coupled repair. The subunits are known as Ddb1 and Ckn1 in S. pombe; Ddb1 contains a motif called the DDB-box that interacts with adaptor proteins for DDB1/cullin 4 ubiquitin ligases.","definition_xrefs":["PMID:18794354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03454":null,"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Ddb1-Ckn1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070912","terms_by_termid":{"GO:0070912":null}}


id: PBO:0048632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 1","termid":"PBO:0048632"}


id: MONDO:0010760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XH antigen","secondary_identifiers":["MEDGEN:854528","OMIM:314800","MESH:C009691","UMLS:C3887689"],"synonyms":[{"name":"XH antigen","type":"exact"}],"termid":"MONDO:0010760","xrefs":{"Monarch":{"xref_id":"0010760"}}}


id: GO:0141073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts opsonization by the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18068388","PMID:2307127","PMID:28860090","PMID:18941224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host opsonization","synonyms":[{"name":"disruption by symbiont of host opsonization","type":"exact"}],"termid":"GO:0141073"}


id: PBO:0110343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CANT1 pseudogene 1","termid":"PBO:0110343"}


id: GO:0003336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The delamination process that results in the shedding of a corneocyte from the surface of the epidermis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"},{"relation_name":"part_of","term_name":"corneocyte development","termid":"GO:0003335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"corneocyte desquamation","synonyms":[{"name":"epidermal desquamation","type":"exact"}],"termid":"GO:0003336"}


id: MONDO:0010682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myoclonic epilepsy, progressive, X-linked (obsolete MONDO:0010682)","secondary_identifiers":["OMIM:310370"],"synonyms":[{"name":"myoclonic epilepsy, progressive","type":"exact"}],"termid":"MONDO:0010682","xrefs":{"Monarch":{"xref_id":"0010682"}}}


id: PBO:0026985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_spatial_extent_of_centromeric_heterochromatin_assembly","termid":"PBO:0026985"}


id: PBO:0043030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4A","termid":"PBO:0043030"}


id: MONDO:0030953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies","termid":"MONDO:0031439"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies 2","secondary_identifiers":["UMLS:C5543057","DOID:0112358","MEDGEN:1782253","OMIM:619184"],"synonyms":[{"name":"SSFSC2","type":"exact"},{"name":"short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies","type":"broad"},{"name":"short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies 2","type":"exact"}],"termid":"MONDO:0030953","xrefs":{"Monarch":{"xref_id":"0030953"}}}


id: GO:0072223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular mesangium over time, from its formation to the mature structure. The metanephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the metanephros, which helps to support the capillary loops in a renal glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangium development","termid":"GO:0072109"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature development","termid":"GO:0072239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular mesangium development","termid":"GO:0072223"}


id: PBO:0001216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export receptor Nxt1","termid":"PBO:0001216"}


id: PBO:0074239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 51 subunit alpha","termid":"PBO:0074239"}


id: PBO:0086701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; may be involved in phosphatase regulation and/or generation of precursor metabolites and energy","termid":"PBO:0086701"}


id: SO:0000397
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U6atac_snRNA is an snRNA required for the splicing of the minor U12-dependent class of eukaryotic nuclear introns. It forms a base paired complex with U4atac_snRNA (SO:0000394).","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6atac_snRNA","synonyms":[{"name":"U6atac small nuclear RNA","type":"exact"},{"name":"U6atac snRNA","type":"exact"},{"name":"snRNA U6atac","type":"exact"}],"termid":"SO:0000397"}


id: FYPO:0008260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is decreased, and the localizatiion to the endoplasmic reticulum is increased. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PMID:22848669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell surface","termid":"FYPO:0008258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell surface, protein mislocalized to endoplasmic reticulum","termid":"FYPO:0008260"}


id: GO:0051308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which paired chromosomes are physically detached from each other during male meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male meiosis chromosome segregation","termid":"GO:0007060"},{"relation_name":"is_a","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"male meiosis chromosome separation","synonyms":[{"name":"chromosome separation during male meiosis","type":"exact"},{"name":"male meiosis chromosome resolution","type":"exact"}],"termid":"GO:0051308"}


id: PBO:0046748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 3 like 4","termid":"PBO:0046748"}


id: GO:0017013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a flavin group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein flavinylation","synonyms":[{"name":"protein amino acid flavinylation","type":"exact"}],"termid":"GO:0017013"}


id: GO:2001046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of integrin-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of integrin-mediated signaling pathway","termid":"GO:2001044"},{"relation_name":"positively_regulates","term_name":"integrin-mediated signaling pathway","termid":"GO:0007229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of integrin-mediated signaling pathway","synonyms":[{"name":"positive regulation of integrin-mediated signalling pathway","type":"exact"}],"termid":"GO:2001046"}


id: PBO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint clamp complex protein Rad9","termid":"PBO:0001139"}


id: PBO:0076368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 5","termid":"PBO:0076368"}


id: PBO:0061315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPHS2 stomatin family member, podocin","termid":"PBO:0061315"}


id: PBO:0091425
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrameric(1)","termid":"PBO:0091425"}


id: PBO:0031090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-large_and_small_daughter_nuclei","termid":"PBO:0031090"}


id: PBO:0001859
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.34","termid":"PBO:0001859"}


id: PBO:0086668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; predicted to have a role in transcription based on computational 'guilt by association' analysis","termid":"PBO:0086668"}


id: GO:0045138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the adult male tail tip is generated and organized. In some species of rhabitid nematodes, the male tail tip undergoes a morphological change such that the most posterior hypodermal cells in the tail (hyp8-11 in C. elegans) fuse and retract anteriorly, changing the shape of the tail from a pointed, tapered cone, or spike, to a rounded, blunt dome.","definition_xrefs":["GOC:kmv","PMID:18050419","PMID:21408209","PMID:7409314","PMID:16806150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male anatomical structure morphogenesis","termid":"GO:0090598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode male tail tip morphogenesis","synonyms":[{"name":"male tail morphogenesis","type":"broad"},{"name":"male tail tip morphogenesis","type":"related"},{"name":"tail tip morphogenesis","type":"related"}],"termid":"GO:0045138"}


id: PBO:0090094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit Rcf2","termid":"PBO:0090094"}


id: MOD:01545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01545"}


id: PBO:0077075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIAM Rac1 associated GEF 1","termid":"PBO:0077075"}


id: PBO:0046811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F11 receptor","termid":"PBO:0046811"}


id: PBO:0030834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5-phosphoribosyl_diphosphate_level","termid":"PBO:0030834"}


id: PBO:0050790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3C2, pseudogene","termid":"PBO:0050790"}


id: MONDO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuritis of lower limb","termid":"MONDO:0004797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"tibial nerve palsy","secondary_identifiers":["UMLS:C0154751","MEDGEN:509643","DOID:12529","ICD9:355.8","SCTID:365258000"],"termid":"MONDO:0001544","xrefs":{"Monarch":{"xref_id":"0001544"}}}


id: GO:2000951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xyloglucan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xyloglucan metabolic process","termid":"GO:2000948"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"regulates","term_name":"xyloglucan catabolic process","termid":"GO:2000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of xyloglucan catabolic process","synonyms":[{"name":"regulation of xyloglucan catabolism","type":"exact"}],"termid":"GO:2000951"}


id: PBO:0053260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF antisense RNA 1","termid":"PBO:0053260"}


id: MONDO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of frontal sinusitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal sinusitis","termid":"MONDO:0001121"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute frontal sinusitis","secondary_identifiers":["DOID:14225","icd11.foundation:86893536","ICD9:461.1","MEDGEN:510087","SCTID:91038008","UMLS:C0155805","ICD10CM:J01.1"],"synonyms":[{"name":"frontal sinusitis, acute","type":"exact"}],"termid":"MONDO:0001912","xrefs":{"Monarch":{"xref_id":"0001912"}}}


id: MONDO:0000946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Involuntary spasm of the outer muscles of the vagina during penetration that results from a psychological cause.","definition_xrefs":["NCIT:C35113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychosexual disorder","termid":"MONDO:0000947"},{"relation_name":"is_a","term_name":"vaginismus","termid":"MONDO:0021723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychologic vaginismus","secondary_identifiers":["ICD9:306.51","UMLS:C0042266","SCTID:71787009","MEDGEN:52970","DOID:10131"],"synonyms":[{"name":"functional vaginismus","type":"exact"},{"name":"non-organic vaginismus","type":"exact"},{"name":"psychogenic vaginismus","type":"exact"}],"termid":"MONDO:0000946","xrefs":{"Monarch":{"xref_id":"0000946"}}}


id: GO:0005149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-1 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-1 receptor binding","synonyms":[{"name":"IL-1","type":"narrow"},{"name":"interleukin-1 receptor ligand","type":"narrow"}],"termid":"GO:0005149"}


id: PBO:0074160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC35F3 antisense RNA 1","termid":"PBO:0074160"}


id: PBO:0087027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L13A; not essential for viability; homologous to mammalian ribosomal protein L13, no bacterial homolog; RPL13A has a paralog, RPL13B, that arose from the whole genome duplication","termid":"PBO:0087027"}


id: PR:G2TRR1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gem7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem-associated protein 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.16","synonyms":[{"name":"Spom972h-gem7","type":"exact"}],"termid":"PR:G2TRR1"}


id: PBO:0081608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 530","termid":"PBO:0081608"}


id: PBO:0108895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 8","termid":"PBO:0108895"}


id: MONDO:0003166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pilocytic astrocytoma (obsolete MONDO:0003166)","termid":"MONDO:0003166","xrefs":{"Monarch":{"xref_id":"0003166"}}}


id: PBO:0049451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 5","termid":"PBO:0049451"}


id: PBO:0075549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm flagellar 1","termid":"PBO:0075549"}


id: GO:0106094
data:
  {"annotated_genes":["SJAG_04558","SJAG_05196","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96212,112282,102295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034993"},{"annotations":[96215,102303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A nuclear membrane protein complex which connects the nuclear outer and inner membranes together, and links thereby links the nuclear lumen to cytoplasmic microtubules.","definition_xrefs":["GOC:vw","PMID:19225124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane protein complex","termid":"GO:0106083"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear membrane microtubule tethering complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106094","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: PBO:0057437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 554","termid":"PBO:0057437"}


id: PBO:0082415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional dehydrogenase and ferrochelatase; involved in the biosynthesis of siroheme, a prosthetic group used by sulfite reductase; required for sulfate assimilation and methionine biosynthesis","termid":"PBO:0082415"}


id: GO:0098948
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic specialization membrane (obsolete GO:0098948)","synonyms":[{"name":"intrinsic to postsynaptic specialization membrane","type":"narrow"}],"termid":"GO:0098948"}


id: PBO:0068936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 179, pseudogene","termid":"PBO:0068936"}


id: MONDO:0001851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"primary lacrimal atrophy","secondary_identifiers":["MEDGEN:509859","ICD9:375.13","SCTID:17093002","DOID:1399","UMLS:C0155229"],"termid":"MONDO:0001851","xrefs":{"Monarch":{"xref_id":"0001851"}}}


id: FYPO_EXT:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"intermediate fraction of cells (penetrance) or moderate phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium","termid":"FYPO_EXT:0000002"}


id: PBO:0039191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"akirin 1 pseudogene 2","termid":"PBO:0039191"}


id: MONDO:0020154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete microblepharon-ablephara syndrome (obsolete MONDO:0020154)","secondary_identifiers":["Orphanet:98563"],"termid":"MONDO:0020154","xrefs":{"Monarch":{"xref_id":"0020154"}}}


id: MONDO:0019980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bilateral renal hypoplasia is a form of renal hypoplasia, a renal developmental anomaly in which both kidneys are small and have a deficit in the number of nephrons present.","definition_xrefs":["Orphanet:97362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypoplasia","termid":"MONDO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypoplasia, bilateral","secondary_identifiers":["MEDGEN:609099","ICD10CM:Q60.4","SCTID:268232000","GARD:19374","UMLS:C0431692"],"termid":"MONDO:0019980","xrefs":{"Monarch":{"xref_id":"0019980"}}}


id: GO:0002182
data:
  {"annotated_genes":["SJAG_02017","SJAG_04168","SJAG_02493","SJAG_04452","SJAG_04157","SJAG_04756","SJAG_02180","SJAG_01438","SJAG_03094","SJAG_05332","SJAG_00468","SJAG_04029","SJAG_01128","SJAG_01851","SJAG_04174","SJAG_01411","SJAG_02189","SJAG_04204","SJAG_02812","SJAG_01536","SJAG_03677","SJAG_04020","SJAG_03863","SJAG_00579","SJAG_04847","SJAG_00541","SJAG_02020","SJAG_01074","SJAG_02585","SJAG_02738","SJAG_02871"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87194,87195,90075,90076,93101,93102,93103,94620,94621,94845,95176,95177,96206,97802,97803,97839,97840,98584,98585,104564,104873,104874,105030,106556,106557,107361,108618,108619,109293,109294,110043,111780,111781,111844,111845,111846,112955,112956,113311,114170,115161,115741,115742,116395,117910,117911,117912,118340,118341,118389,118390],"is_not":false,"summary":null,"term":"GO:0002182"},{"annotations":[113850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140708"},{"annotations":[109610,94966,113413,108946],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140018"}]},"cv_name":"biological_process","definition":"The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in the cytoplasm.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"part_of","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00468":null,"SJAG_00541":null,"SJAG_00579":null,"SJAG_01074":null,"SJAG_01128":null,"SJAG_01411":null,"SJAG_01438":null,"SJAG_01536":null,"SJAG_01851":null,"SJAG_02017":null,"SJAG_02020":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02493":null,"SJAG_02585":null,"SJAG_02738":null,"SJAG_02812":null,"SJAG_02871":null,"SJAG_03094":null,"SJAG_03677":null,"SJAG_03863":null,"SJAG_04020":null,"SJAG_04029":null,"SJAG_04157":null,"SJAG_04168":null,"SJAG_04174":null,"SJAG_04204":null,"SJAG_04452":null,"SJAG_04756":null,"SJAG_04847":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0002181","GO:0010467"],"is_obsolete":false,"name":"cytoplasmic translational elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002182","terms_by_termid":{"GO:0002182":null,"GO:0140018":null,"GO:0140708":null}}


id: PR:G2TRR2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32F12.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C32F12.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.17","synonyms":[{"name":"Spom972h-SPBC32F12.17","type":"exact"}],"termid":"PR:G2TRR2"}


id: PBO:0026894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_nitrogen_starvation","termid":"PBO:0026894"}


id: GO:0044394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by the addition of a malonyl (CO-CH2-CO) group.","definition_xrefs":["GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein malonylation","termid":"GO:0044394"}


id: PBO:0084128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexokinase expressed during growth with low glucose levels; induced on non-fermentable carbon sources; required for transcriptional induction of the early meiotic-specific transcription factor IME1; required for sporulation; expression regulated by glucose-repression transcription factors Mig1/2p; protein abundance increases in response to DNA replication stress; EMI2 has a paralog, GLK1, that arose from the whole genome duplication","termid":"PBO:0084128"}


id: PBO:0079909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1","termid":"PBO:0079909"}


id: PBO:0054083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1433","termid":"PBO:0054083"}


id: PBO:0052473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 17 pseudogene 2","termid":"PBO:0052473"}


id: GO:0060540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the diaphragm are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ morphogenesis","termid":"GO:0048644"},{"relation_name":"part_of","term_name":"diaphragm development","termid":"GO:0060539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diaphragm morphogenesis","termid":"GO:0060540"}


id: PBO:0046734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EWS RNA binding protein 1","termid":"PBO:0046734"}


id: FYPO:0002969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000932"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to mitotic spindle pole body","synonyms":[{"name":"increased protein localisation to mitotic spindle pole body","type":"exact"},{"name":"increased protein localization to mitotic SPB","type":"exact"},{"name":"increased protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"increased protein localization to spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0002969"}


id: PBO:0038721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 16","termid":"PBO:0038721"}


id: MONDO:0011200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A focal dystonia characterized by predominately cervical dystonia that has material basis in variation in the chromosome region 18p.","definition_xrefs":["DOID:0090040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"torsion dystonia 7","secondary_identifiers":["MESH:C566572","NANDO:1200518","OMIM:602124","Orphanet:93963","UMLS:C1865818","GARD:7782","MEDGEN:355560"],"synonyms":[{"name":"DYT7","type":"related"},{"name":"cervical dystonia, primary","type":"related"},{"name":"dystonia 7, torsion","type":"related"},{"name":"dystonia-7, torsion","type":"exact"},{"name":"torsion dystonia type 7","type":"exact"},{"name":"torsion dystonia, focal adult-onset","type":"related"}],"termid":"MONDO:0011200","xrefs":{"Monarch":{"xref_id":"0011200"}}}


id: PBO:0027640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_spindle_during_meiosis_II","termid":"PBO:0027640"}


id: RO:HOM0000073
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Synology that results from allopolyploidy.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_ohnology_relationship_with","termid":"RO:HOM0000022"},{"relation_name":"is_a","term_name":"in_synology_relationship_with","termid":"RO:HOM0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homoeology_relationship_with","synonyms":[{"name":"homoeologous to","type":"exact"}],"termid":"RO:HOM0000073"}


id: GO:0045605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"negative regulation of epidermis development","termid":"GO:0045683"},{"relation_name":"negatively_regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermal cell differentiation","synonyms":[{"name":"down regulation of epidermal cell differentiation","type":"exact"},{"name":"down-regulation of epidermal cell differentiation","type":"exact"},{"name":"downregulation of epidermal cell differentiation","type":"exact"},{"name":"inhibition of epidermal cell differentiation","type":"narrow"},{"name":"negative regulation of hypodermal cell differentiation","type":"related"}],"termid":"GO:0045605"}


id: GO:0044659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissemination of mature viral particles from a host cell by the rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["PMID:26728778","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated cytolysis of host cell","termid":"GO:0001897"},{"relation_name":"is_a","term_name":"viral release from host cell","termid":"GO:0019076"},{"relation_name":"is_a","term_name":"disruption of plasma membrane integrity in another organism","termid":"GO:0051673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral release from host cell by cytolysis","secondary_identifiers":["GO:0019077","VZ:1077","GO:0046756"],"synonyms":[{"name":"cytolysis by virus of host cell","type":"related"},{"name":"lytic viral life cycle","type":"related"},{"name":"lytic viral release","type":"exact"},{"name":"viral exit from host cell by cytolysis","type":"exact"},{"name":"viral release by cell lysis","type":"exact"},{"name":"viral release by host cell lysis","type":"exact"}],"termid":"GO:0044659"}


id: PBO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit 7a (predicted)","termid":"PBO:0002789"}


id: PBO:0090074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding splicing factor Ntr1","termid":"PBO:0090074"}


id: GO:0042944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-alanine from one side of a membrane to the other. D-alanine is the D-enantiomer of 2-aminopropanoic acid.","definition_xrefs":["GOC:mtg_transport","GOC:jl","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine transmembrane transporter activity","termid":"GO:0022858"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"D-alanine transmembrane transporter activity","synonyms":[{"name":"D-alanine transporter activity","type":"broad"}],"termid":"GO:0042944"}


id: GO:0018988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The periodic shedding of part or all of a protein-based cuticle, which is then replaced by a new protein-based cuticle. A cuticle is the outer layer of an animal which acts to prevent water loss.","definition_xrefs":["GOC:mtg_sensu","GOC:ems"],"gene_count":0,"genotype_count":0,"name":"obsolete molting cycle, protein-based cuticle (obsolete GO:0018988)","synonyms":[{"name":"protein-based cuticle molting cycle","type":"exact"}],"termid":"GO:0018988"}


id: GO:0051238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining metal ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of metal ion (obsolete GO:0051238)","synonyms":[{"name":"metal ion retention","type":"exact"},{"name":"metal ion sequestering","type":"exact"},{"name":"metal ion sequestration","type":"exact"},{"name":"metal ion storage","type":"exact"},{"name":"retention of metal ion","type":"exact"},{"name":"sequestration of metal ion","type":"exact"},{"name":"storage of metal ion","type":"exact"}],"termid":"GO:0051238"}


id: PBO:0061670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 3","termid":"PBO:0061670"}


id: FYPO:0002358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0005865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"normal histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"normal silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002358"}


id: PBO:0072075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 5","termid":"PBO:0072075"}


id: PR:Q9HGN6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-dihydrouridine synthase 1-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11082:SF5","PRO:DNx","OMA:SCHPO03256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.04","secondary_identifiers":["UniProtKB:Q9HGN6"],"synonyms":[{"name":"Spom972h-DUS1L","type":"exact"},{"name":"tRNA-dihydrouridine synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGN6"}


id: PBO:0083028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this putative ORF was included in the original annotation of Chromosome III but was later withdrawn","termid":"PBO:0083028"}


id: MONDO:0011065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hunter-McAlpine craniosynostosis is characterized by craniosynostosis, intellectual deficit, short stature, facial dysmorphism (oval face with almond-shaped palpebral fissures, droopy eyelids and a small nose) and minor distal anomalies. It has been described in 10 patients. Transmission is autosomal dominant and the syndrome is associated with partial duplication of the long arm of chromosome 5 (5q35-5qter).","definition_xrefs":["Orphanet:97340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Hunter-McAlpine craniosynostosis","secondary_identifiers":["UMLS:C1832408","icd11.foundation:1445975694","MESH:C536072","OMIM:601379","GARD:2754","MEDGEN:321949","SCTID:721227001"],"synonyms":[{"name":"Hunter-McAlpine craniosynostosis syndrome","type":"related"},{"name":"Hunter-McAlpine syndrome","type":"related"},{"name":"craniosynostosis, mental deficiency, almond-shaped palpebral fissures, downturned mouth, mild acral-skeletal anomalies, and short stature","type":"related"}],"termid":"MONDO:0011065","xrefs":{"Monarch":{"xref_id":"0011065"}}}


id: MONDO:0100157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder characterized by onset of megaloblastic anemia associated with decreased serum vitamin B12 (cobalamin, Cbl) in infancy or early childhood. Low molecular weight (LMW) proteinuria is frequently present, but usually occurs later and is usually mild or subclinical. Patients often present with vague symptoms, including failure to thrive, loss of appetite, fatigue, lethargy, and/or recurrent infections. Treatment with vitamin B12 results in sustained clinical improvement of the anemia. The proteinuria is nonprogressive, and affected individuals do not have deterioration of kidney function; correct diagnosis is important to prevent unnecessary treatment. The disorder results from a combination of vitamin B12 deficiency due to selective malabsorption of the vitamin, and impaired reabsorption of LMW proteins in the proximal renal tubule. These defects are caused by disruption of the AMN/CUBN complex that forms the 'cubam' receptor responsible for intestinal uptake of B12/GIF (CBLIF).","definition_xrefs":["OMIM:618882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Imerslund-Grasbeck syndrome","termid":"MONDO:0009853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005066","MONDO:0005570","MONDO:0006025"],"is_obsolete":false,"name":"Imerslund-Grasbeck syndrome type 2","secondary_identifiers":["MEDGEN:865385","UMLS:C4016948"],"synonyms":[{"name":"Imerslund-Grasbeck syndrome 2","type":"exact"},{"name":"megaloblastic anemia, Norwegian type","type":"exact"}],"termid":"MONDO:0100157","xrefs":{"Monarch":{"xref_id":"0100157"}}}


id: PR:Q9C109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P27G11.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.16","synonyms":[{"name":"Spom972h-SPAP27G11.16","type":"exact"}],"termid":"PR:Q9C109"}


id: PATO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased position","termid":"PATO:0001475"},{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased angle to","termid":"PATO:0002327"}


id: PBO:0089762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6- mannanase","termid":"PBO:0089762"}


id: PBO:0088488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase Nta1","termid":"PBO:0088488"}


id: PBO:0075871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3 beta-galactoside alpha-2,3-sialyltransferase 1","termid":"PBO:0075871"}


id: MONDO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete achondrogenesis (obsolete MONDO:0000851)","termid":"MONDO:0000851","xrefs":{"Monarch":{"xref_id":"0000851"}}}


id: PBO:0027870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_and_delayed_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0027870"}


id: PBO:0044147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CST telomere replication complex component 1","termid":"PBO:0044147"}


id: PBO:0067780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 80","termid":"PBO:0067780"}


id: MONDO:0012661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"visceral leishmaniasis","termid":"MONDO:0005445"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to visceral leishmaniasis, 3","secondary_identifiers":["UMLS:C1969648","MEDGEN:370066","OMIM:611382"],"synonyms":[{"name":"KAZA3","type":"related"},{"name":"kala-AZAR, susceptibility to, 3","type":"related"},{"name":"leishmaniasis, visceral, susceptibility to, 3","type":"related"}],"termid":"MONDO:0012661","xrefs":{"Monarch":{"xref_id":"0012661"}}}


id: MOD:00584
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with 4-sulfophenyl isothiocyanate.","definition_xrefs":["PubMed:14745769","Unimod:261","PubMed:16526082","PubMed:14689565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isothiocyanate reagent derivatized residue","termid":"MOD:00841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-sulfophenyl isothiocyanate derivatized residue","synonyms":[{"name":"4-sulfophenyl isothiocyanate","type":"related"},{"name":"SPITC","type":"related"}],"termid":"MOD:00584"}


