# terms

id: GO:0047702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3S)-3,6-diaminohexanoate = (3S,5S)-3,5-diaminohexanoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-lysine 5,6-aminomutase activity (obsolete GO:0047702)","synonyms":[{"name":"b-lysine 5,6-aminomutase activity","type":"exact"}],"termid":"GO:0047702"}


id: MONDO:0016675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal arthrogryposis type 10","secondary_identifiers":["UMLS:C1861238","DOID:0111593","SCTID:275336002","Orphanet:251515","OMIM:187370","GARD:17212","MEDGEN:349990","MESH:C566069"],"synonyms":[{"name":"DA10","type":"exact"},{"name":"arthrogryposis, distal, type 10","type":"related"},{"name":"congenital plantar contractures","type":"related"},{"name":"distal arthrogryposis type 10","type":"exact"},{"name":"plantar flexion contracture","type":"exact"},{"name":"short Achilles tendon","type":"exact"},{"name":"short tendo calcaneus","type":"exact"},{"name":"tendo calcaneus, short","type":"related"}],"termid":"MONDO:0016675","xrefs":{"Monarch":{"xref_id":"0016675"}}}


id: GO:1902407
data:
  {"annotated_genes":["SJAG_03703","SJAG_03596","SJAG_00228","SJAG_01894","SJAG_01143","SJAG_04703","SJAG_01732","SJAG_04930","SJAG_02431","SJAG_04498","SJAG_02700","SJAG_03025","SJAG_00082","SJAG_00268","SJAG_01805","SJAG_04597","SJAG_03045","SJAG_00700","SJAG_04982","SJAG_04887","SJAG_04077","SJAG_03048","SJAG_02592","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118076,87774,118541,92095,102052,111750,92047,97421,98401,94789,117318,117898,111319,100755,101912,116477,97148,97223,97530,91835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[97531],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[101856],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[93917,89508],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[93883,93311,118919],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any assembly of mitotic cytokinetic actomyosin apparatus.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly of actomyosin apparatus involved in cytokinesis","termid":"GO:0000912"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000281","GO:0044085"],"is_obsolete":false,"name":"assembly of actomyosin apparatus involved in mitotic cytokinesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actomyosin apparatus assembly involved in cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"cytokinesis, formation of actomyosin apparatus involved in mitotic cell cycle","type":"exact"},{"name":"formation of actomyosin apparatus involved in cytokinesis involved in mitotic cell cycle","type":"related"}],"termid":"GO:1902407","terms_by_termid":{"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: PBO:0053004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit gamma 3","termid":"PBO:0053004"}


id: PBO:0043913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRLF3 pseudogene 3","termid":"PBO:0043913"}


id: PBO:0054326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1719","termid":"PBO:0054326"}


id: GO:0005854
data:
  {"annotated_genes":["SJAG_01641","SJAG_01733"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97410,106765],"is_not":false,"summary":null,"term":"GO:0005854"}]},"cv_name":"cellular_component","definition":"A heterodimeric protein complex that can reversibly bind to ribosomes, and is located in direct proximity to newly synthesized polypeptide chains as they emerge from the ribosome.","definition_xrefs":["PMID:12475173","PMID:7568149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01641":null,"SJAG_01733":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"nascent polypeptide-associated complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAC","type":"exact"},{"name":"NACA","type":"exact"}],"termid":"GO:0005854","terms_by_termid":{"GO:0005854":null}}


id: PBO:0080259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 22 pseudogene","termid":"PBO:0080259"}


id: PBO:0113036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein that localizes to birth scars of daughter cells; linked to beta-1,3- and beta-1,6-glucan heteropolymer through phosphodiester bond; required for propionic acid resistance; targeted to vacuole via AP-3 pathway","termid":"PBO:0113036"}


id: PBO:0045239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 7","termid":"PBO:0045239"}


id: PBO:0018135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brefeldin A transmembrane transporter Bfr1","termid":"PBO:0018135"}


id: FYPO:0003612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population of spores are viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"viable spore population","synonyms":[{"name":"viable population of spores","type":"exact"}],"termid":"FYPO:0003612"}


id: PBO:0050890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediate early response 3","termid":"PBO:0050890"}


id: GO:0014001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sclerenchyma cell. A sclerenchyma cell is a plant cell with thick lignified walls, normally dead at maturity and specialized for structural strength. Includes fiber cells, that are greatly elongated; and sclereids, that are more isodiametric. Intermediate types exist. Cells may or may not be devoid of protoplasm at maturity. Cell form and size are variable.","definition_xrefs":["CL:0000276","PO:0000077","GOC:ef","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sclerenchyma cell differentiation","termid":"GO:0014001"}


id: GO:0070800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of conidiophore stalk development, a process that leads to the formation of a conidiophore stalk. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of conidiophore stalk development","termid":"GO:0070799"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"conidiophore stalk development","termid":"GO:0070788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of conidiophore stalk development","termid":"GO:0070800"}


id: PBO:0086828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YOR338W transcription is regulated by Azf1p and its transcript is a specific target of the G protein effector Scp160p; identified as being required for sporulation in a high-throughput mutant screen; YOR338W has a paralog, FUN19, that arose from the whole genome duplication","termid":"PBO:0086828"}


id: PBO:0004856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn13a","termid":"PBO:0004856"}


id: PBO:0047235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member G","termid":"PBO:0047235"}


id: PBO:0045075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP2 antisense RNA 1","termid":"PBO:0045075"}


id: MOD:00027
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-tryptophan.","definition_xrefs":["ChEBI:29954","DeltaMass:0","PubMed:9324768","PubMed:2059637","RESID:AA0018","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tryptophan residue","synonyms":[{"name":"(2S)-2-amino-3-(1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"L-tryptophan","type":"exact"},{"name":"Trp","type":"exact"},{"name":"alpha-amino-beta-(3-indolyl)propionoic acid","type":"exact"},{"name":"beta(3-indolyl)alanine","type":"exact"}],"termid":"MOD:00027"}


id: PBO:0065606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A1","termid":"PBO:0065606"}


id: GO:0070647
data:
  {"annotated_genes":["SJAG_05032","SJAG_03896","SJAG_00727","SJAG_05977","SJAG_00615","SJAG_02082","SJAG_00795","SJAG_03733","SJAG_01776","SJAG_03616","SJAG_04948","SJAG_02341","SJAG_04011","SJAG_03932","SJAG_01302","SJAG_03325","SJAG_00776","SJAG_01018","SJAG_00033","SJAG_00604","SJAG_02764","SJAG_00720","SJAG_05297","SJAG_03843","SJAG_03950","SJAG_00878","SJAG_02503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89150,100805,92392,92513,108453,90965,109789,104762,94798,105960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000338"},{"annotations":[102357,117827,111763,94102,95987,88760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045116"},{"annotations":[89265,97256,95708,103958,89108,109017,114091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016925"},{"annotations":[116638,107872,95492,105328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032447"}]},"cv_name":"biological_process","definition":"A protein modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to or removed from a target protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00604":null,"SJAG_00615":null,"SJAG_00720":null,"SJAG_00727":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_00878":null,"SJAG_01018":null,"SJAG_01302":null,"SJAG_01776":null,"SJAG_02082":null,"SJAG_02341":null,"SJAG_02503":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03616":null,"SJAG_03733":null,"SJAG_03843":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_03950":null,"SJAG_04011":null,"SJAG_04948":null,"SJAG_05032":null,"SJAG_05297":null,"SJAG_05977":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein modification by small protein conjugation or removal","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070647","terms_by_termid":{"GO:0000338":null,"GO:0016925":null,"GO:0032447":null,"GO:0045116":null}}


id: PBO:0034601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_iron_ion_binding","termid":"PBO:0034601"}


id: GO:0030173
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi membrane (obsolete GO:0030173)","synonyms":[{"name":"Golgi integral membrane protein","type":"related"},{"name":"integral to Golgi membrane","type":"narrow"}],"termid":"GO:0030173"}


id: GO:0018295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via 3'-(8-alpha-FAD)-L-histidine.","definition_xrefs":["RESID:AA0144"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via 3'-(8alpha-FAD)-L-histidine (obsolete GO:0018295)","termid":"GO:0018295"}


id: PR:O59833
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC965.13 gene.","definition_xrefs":["UniProtKB:O59833","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C965.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.13","synonyms":[{"name":"Spom972h-SPCC965.13","type":"exact"}],"termid":"PR:O59833"}


id: PBO:0054925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2339","termid":"PBO:0054925"}


id: PBO:0044801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 4B","termid":"PBO:0044801"}


id: MONDO:0049221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 26, X-linked, female-limited","secondary_identifiers":["UMLS:C4538795","MEDGEN:1618364","OMIM:301010"],"synonyms":[{"name":"MYP26","type":"related"},{"name":"myopia 26, X-linked, female-limited","type":"exact"}],"termid":"MONDO:0049221","xrefs":{"Monarch":{"xref_id":"0049221"}}}


id: PBO:0073073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein pseudogene 2","termid":"PBO:0073073"}


id: FYPO:0002091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during meiosis I or meiosis II, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"lagging chromosomes","termid":"FYPO:0002090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"lagging meiotic chromosomes","synonyms":[{"name":"chromosome segregation defects, lagging meiotic chromosomes","type":"exact"},{"name":"lagging chromosomes during meiosis","type":"exact"},{"name":"meiotic chromosome segregation defects, lagging chromosomes","type":"exact"}],"termid":"FYPO:0002091"}


id: MONDO:0003310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of arteriosclerosis in which calcification of the tunica media is the predominant feature.","definition_xrefs":["NCIT:C35770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriosclerosis disorder","termid":"MONDO:0002277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monckeberg arteriosclerosis","secondary_identifiers":["MEDGEN:165784","DOID:5161","UMLS:C0887866"],"synonyms":[{"name":"Mönckeberg arteriosclerosis","type":"exact"}],"termid":"MONDO:0003310","xrefs":{"Monarch":{"xref_id":"0003310"}}}


id: PBO:0036195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_during_mitotic_G1_phase","termid":"PBO:0036195"}


id: PBO:0077689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFAIP3 interacting protein 1","termid":"PBO:0077689"}


id: PBO:0064981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME N-terminal like, pseudogene","termid":"PBO:0064981"}


id: PBO:0046214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 7","termid":"PBO:0046214"}


id: MONDO:0017386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant mesenchymal neoplasm with skeletal muscle differentiation, occurring in adults and rarely in children. The tumor is characterized by the presence of bizarre round, spindle, and polygonal cells. Clinical presentation includes a rapidly enlarging painful mass usually of the lower extremities.","definition_xrefs":["NCIT:C4258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleomorphic rhabdomyosarcoma","secondary_identifiers":["Orphanet:293199","GARD:21165","ONCOTREE:PLRMS","DOID:3250","ICD9:171.9","SCTID:404054005","UMLS:C0334480","MEDGEN:137770"],"synonyms":[{"name":"anaplastic rhabdomyosarcoma","type":"exact"},{"name":"pleomorphic rhabdomyosarcoma","type":"exact"},{"name":"pleomorphic rhabdomyosarcoma, adult type","type":"exact"}],"termid":"MONDO:0017386","xrefs":{"Monarch":{"xref_id":"0017386"}}}


id: PBO:0074781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3 pseudogene 4","termid":"PBO:0074781"}


id: PBO:0076662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thromboxane A1 receptor","termid":"PBO:0076662"}


id: PBO:0064601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU2F2 antisense RNA 2","termid":"PBO:0064601"}


id: FYPO:0000967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000965"},{"relation_name":"is_a","term_name":"decreased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0001458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000967"}


id: FYPO:0004733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains fewer cytoplasmic microtubules nucleated from the equatorial microtubule organizing center than normal.","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"cytoplasmic microtubules nucleated from eMTOC present in decreased numbers","synonyms":[{"name":"cytoplasmic microtubules nucleated from eMTOC present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules nucleated from eMTOC present in decreased numbers during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules nucleated from eMTOC present in reduced numbers","type":"exact"},{"name":"cytoplasmic microtubules nucleated from equatorial microtubule organizing center present in decreased numbers","type":"exact"},{"name":"decreased number of cytoplasmic microtubules nucleated from eMTOC","type":"exact"},{"name":"reduced number of cytoplasmic microtubules nucleated from eMTOC","type":"exact"}],"termid":"FYPO:0004733"}


id: GO:0046940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing one or more phosphate groups into a nucleoside monophosphate to produce a polyphosphorylated nucleoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"},{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}


id: PBO:0047433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 4","termid":"PBO:0047433"}


id: GO:0086052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an SA node cardiac muscle cell membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"SA node cell action potential","termid":"GO:0086015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane repolarization during SA node cell action potential","synonyms":[{"name":"membrane repolarization involved in regulation of SA node cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of SAN cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0086052"}


id: PBO:0060854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 pseudogene 2","termid":"PBO:0060854"}


id: PBO:0029503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_elongated,_curved_germ_tube","termid":"PBO:0029503"}


id: PBO:0064746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 82","termid":"PBO:0064746"}


id: MONDO:0017019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary interstitial lung disease specific to childhood","termid":"MONDO:0017015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial lung disease specific to infancy","secondary_identifiers":["UMLS:C5679737","Orphanet:264694","MEDGEN:1842984"],"synonyms":[{"name":"ILD specific to infancy","type":"exact"}],"termid":"MONDO:0017019","xrefs":{"Monarch":{"xref_id":"0017019"}}}


id: PBO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase Cts1 (predicted)","termid":"PBO:0000841"}


id: GO:0015303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: galactose or glucose(out) = galactose or glucose(in).","definition_xrefs":["TC:2.A.1.1.6"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose, glucose uniporter activity (obsolete GO:0015303)","synonyms":[{"name":"galactose, glucose uniporter activity","type":"exact"}],"termid":"GO:0015303"}


id: MONDO:0003823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete transient hypogammaglobulinemia of infancy (obsolete MONDO:0003823)","termid":"MONDO:0003823","xrefs":{"Monarch":{"xref_id":"0003823"}}}


id: PBO:0004124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein Mug164","termid":"PBO:0004124"}


id: PR:O42862
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg14 gene.","definition_xrefs":["UniProtKB:O42862","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.02","synonyms":[{"name":"Spom972h-atg14","type":"exact"}],"termid":"PR:O42862"}


id: _global:produces
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"produces","secondary_identifiers":["RO:0003000"],"termid":"_global:produces"}


id: MONDO:0007791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial hypocalciuric hypercalcemia in which the cause of the disease is a mutation in the CASR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypocalciuric hypercalcemia","termid":"MONDO:0018458"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial hypocalciuric hypercalcemia 1","secondary_identifiers":["MedDRA:10068704","SCTID:704166007","UMLS:C0342637","OMIM:145980","MEDGEN:137973","Orphanet:93372","GARD:2796","DOID:0060700","MESH:C537145"],"synonyms":[{"name":"CASR familial hypocalciuric hypercalcemia","type":"exact"},{"name":"FBH1","type":"related"},{"name":"FHH type 1","type":"exact"},{"name":"Fhh1","type":"related"},{"name":"HHC1","type":"exact"},{"name":"familial benign hypercalcemia 1","type":"exact"},{"name":"familial benign hypercalcemia type 1","type":"related"},{"name":"familial hypocalciuric hypercalcemia caused by mutation in CASR","type":"exact"},{"name":"familial hypocalciuric hypercalcemia type 1","type":"exact"},{"name":"familial hypocalciuric hypercalcemia type I","type":"exact"},{"name":"hpocalciuric hypercalcemia, type I","type":"exact"},{"name":"hypercalcemia, familial benign","type":"related"},{"name":"hypercalcemia, familial benign type 1","type":"related"},{"name":"hypocalciuric hypercalcemia type I","type":"exact"},{"name":"hypocalciuric hypercalcemia, acquired","type":"related"},{"name":"hypocalciuric hypercalcemia, familial, type 1","type":"related"},{"name":"hypocalciuric hypercalcemia, familial, type I","type":"related"}],"termid":"MONDO:0007791","xrefs":{"Monarch":{"xref_id":"0007791"}}}


id: PBO:0085361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoprotein of the mRNA cap-binding complex; involved in translational control; repressor of cap-dependent translational initiation; translational activator of select mRNAs during filamentous growth; competes with eIF4G for binding to eIF4E","termid":"PBO:0085361"}


id: PBO:0028374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mitomycin_C","termid":"PBO:0028374"}


id: MONDO:0020808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex cord-stromal tumor that arises from the testis and is characterized by the presence of neoplastic cells with features of Sertoli cells. It usually presents as a slow growing testicular mass. The vast majority of cases follow a benign clinical course.","direct_ancestors":[{"relation_name":"is_a","term_name":"Sertoli cell tumor","termid":"MONDO:0002696"},{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular sertoli cell tumor","secondary_identifiers":["NCIT:C4672","UMLS:C0349671","MEDGEN:91165"],"synonyms":[{"name":"Sertoli Cell Neoplasm of Testis","type":"exact"},{"name":"Sertoli Cell Neoplasm of the Testis","type":"exact"},{"name":"Sertoli Cell Tumor of Testis","type":"exact"},{"name":"Sertoli Cell Tumor of the Testis","type":"exact"},{"name":"Sertoli Cell Tumour of Testis","type":"exact"},{"name":"Sertoli Cell Tumour of the Testis","type":"exact"},{"name":"Testicular Sertoli Cell Neoplasm","type":"exact"},{"name":"Testicular Sertoli Cell Tumor","type":"exact"},{"name":"Testicular Sertoli Cell Tumor, NOS","type":"exact"},{"name":"Testicular Sertoli Cell Tumor, Not Otherwise Specified","type":"exact"},{"name":"Testicular Sertoli Cell Tumour","type":"exact"}],"termid":"MONDO:0020808","xrefs":{"Monarch":{"xref_id":"0020808"}}}


id: GO:0001706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the endoderm during gastrulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of primary germ layer","termid":"GO:0001704"},{"relation_name":"part_of","term_name":"endoderm development","termid":"GO:0007492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoderm formation","secondary_identifiers":["Reactome:R-HSA-9823730"],"synonyms":[{"name":"endoblast formation","type":"narrow"}],"termid":"GO:0001706"}


id: PBO:0081250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 22","termid":"PBO:0081250"}


id: PR:Q9C0X3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13G1.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.15c","synonyms":[{"name":"Spom972h-SPBC13G1.15c","type":"exact"}],"termid":"PR:Q9C0X3"}


id: GO:1990212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the ethylene levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16167902","GOC:ml"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of ethylene levels in host (obsolete GO:1990212)","termid":"GO:1990212"}


id: PBO:0064187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIA pseudogene 1","termid":"PBO:0064187"}


id: GO:2001205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of osteoclast differentiation","termid":"GO:0045671"},{"relation_name":"is_a","term_name":"regulation of osteoclast development","termid":"GO:2001204"},{"relation_name":"negatively_regulates","term_name":"osteoclast development","termid":"GO:0036035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoclast development","synonyms":[{"name":"negative regulation of osteoclast cell development","type":"exact"}],"termid":"GO:2001205"}


id: PBO:0045986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 autophagy associated transmembrane protein","termid":"PBO:0045986"}


id: MONDO:0007782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthermia, cutaneous, with headaches and nausea","secondary_identifiers":["MEDGEN:374453","OMIM:145590","MESH:C564156","UMLS:C1840373"],"synonyms":[{"name":"farmer syndrome","type":"related"},{"name":"hyperthermia, cutaneous, with headaches and nausea","type":"exact"}],"termid":"MONDO:0007782","xrefs":{"Monarch":{"xref_id":"0007782"}}}


id: GO:0015647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of peptidoglycans, a class of glycoconjugates found in bacterial cell walls, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"peptidoglycan transmembrane transporter activity","synonyms":[{"name":"murein transporter activity","type":"exact"}],"termid":"GO:0015647"}


id: GO:0110001
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bacterial protein complex that neutralises its own toxin by complexing the toxin with the antitoxin. The antitoxin can be either a protein or an RNA. The neutralising toxin-antitoxin complex also acts as a transcriptional repressor of the toxin-antitoxin operon.","definition_xrefs":["GOC:bhm","PMID:16109374","PMID:25093388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"toxin-antitoxin complex","termid":"GO:0110001"}


id: GO:1903083
data:
  {"annotated_genes":["SJAG_03540","SJAG_04126","SJAG_03327","SJAG_04259","SJAG_02336","SJAG_01297","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101289,113227,100825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034501"},{"annotations":[103387,107726,99880,118102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a condensed chromosome.","definition_xrefs":["GO_REF:0000087","PMID:12707312","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03327":null,"SJAG_03540":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to condensed chromosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in condensed chromosome","type":"exact"},{"name":"protein localisation to condensed chromosome","type":"exact"},{"name":"protein localization in condensed chromosome","type":"exact"}],"termid":"GO:1903083","terms_by_termid":{"GO:0034501":null,"GO:0140210":null}}


id: PBO:0004249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid-CoA ligase","termid":"PBO:0004249"}


id: FYPO:0008013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:35536002","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal inositol hexakisphosphate kinase activity","termid":"FYPO:0008013"}


id: PBO:0085556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing an N-terminal epsin-like domain; involved in clathrin recruitment and traffic between the Golgi and endosomes; associates with the clathrin adaptor Gga2p","termid":"PBO:0085556"}


id: PR:Q9HDY0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt71 gene.","definition_xrefs":["UniProtKB:Q9HDY0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt71 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.10c","synonyms":[{"name":"Spom972h-ypt71","type":"exact"}],"termid":"PR:Q9HDY0"}


id: PBO:0088405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-5-)-methyltransferase","termid":"PBO:0088405"}


id: FYPO:0003590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which vacuoles are smaller than normal during sporulation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small vacuoles during sporulation","synonyms":[{"name":"vacuoles present in increased numbers, with decreased vacuole size, during sporulation","type":"exact"}],"termid":"FYPO:0003590"}


id: PBO:0074769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3B-2","termid":"PBO:0074769"}


id: GO:1902480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mitotic spindle.","definition_xrefs":["GOC:TermGenie","PMID:23885124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mitotic spindle","synonyms":[{"name":"protein localisation in mitotic spindle","type":"exact"},{"name":"protein localisation to mitotic spindle","type":"exact"},{"name":"protein localization in mitotic spindle","type":"exact"}],"termid":"GO:1902480"}


id: MONDO:0043079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute articular rheumatism (obsolete MONDO:0043079)","secondary_identifiers":["SCTID:81077008"],"synonyms":[{"name":"acute articular rheumatism","type":"exact"},{"name":"acute rheumatic arthritis","type":"exact"},{"name":"acute rheumatism","type":"related"}],"termid":"MONDO:0043079","xrefs":{"Monarch":{"xref_id":"0043079"}}}


id: PBO:0051541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 receptor","termid":"PBO:0051541"}


id: MONDO:0001657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the brain.","definition_xrefs":["NCIT:C3568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain cancer","secondary_identifiers":["ICD9:239.6","NCIT:C4952","ICD9:191.9","CSP:2006-2736","DOID:1319","ICD9:191","ICD9:191.8","MEDGEN:57796","MESH:D001932","SCTID:428061005","UMLS:C0153633"],"synonyms":[{"name":"BT - brain tumor","type":"related"},{"name":"BT - brain tumour","type":"related"},{"name":"adult brain tumor","type":"narrow"},{"name":"adult brain tumour","type":"narrow"},{"name":"adult malignant brain neoplasm","type":"narrow"},{"name":"brain cancer","type":"exact"},{"name":"brain neoplasm","type":"broad"},{"name":"brain neoplasm, adult","type":"related"},{"name":"brain neoplasms, malignant","type":"exact"},{"name":"brain tumor, adult","type":"related"},{"name":"cancer of brain","type":"exact"},{"name":"cancer of the brain","type":"exact"},{"name":"malignant brain neoplasm","type":"exact"},{"name":"malignant brain tumor","type":"exact"},{"name":"malignant brain tumour","type":"exact"},{"name":"malignant neoplasm of brain","type":"exact"},{"name":"malignant neoplasm of the brain","type":"exact"},{"name":"malignant primary brain neoplasm","type":"narrow"},{"name":"malignant primary brain tumor","type":"narrow"},{"name":"malignant primary brain tumour","type":"narrow"},{"name":"malignant tumor of adult brain","type":"narrow"},{"name":"malignant tumor of brain","type":"exact"},{"name":"malignant tumor of the brain","type":"exact"},{"name":"malignant tumour of adult brain","type":"narrow"},{"name":"malignant tumour of brain","type":"exact"},{"name":"malignant tumour of the brain","type":"exact"},{"name":"neoplasm of unspecified nature of brain","type":"related"},{"name":"primary brain neoplasm","type":"related"},{"name":"primary brain tumor","type":"related"},{"name":"primary brain tumour","type":"related"},{"name":"primary malignant neoplasm of brain","type":"exact"},{"name":"tumor of the brain","type":"broad"},{"name":"tumour of the brain","type":"broad"}],"termid":"MONDO:0001657","xrefs":{"Monarch":{"xref_id":"0001657"}}}


id: MONDO:0003426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm composed of glands containing epithelial clear cells.","definition_xrefs":["NCIT:C4151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell adenoma","secondary_identifiers":["ICDO:8310/0","DOID:5390","MEDGEN:90761","UMLS:C0334315"],"synonyms":[{"name":"adenoma, clear cell, benign","type":"exact"},{"name":"clear cell adenoma","type":"exact"},{"name":"clear cell adenoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003426","xrefs":{"Monarch":{"xref_id":"0003426"}}}


id: PBO:0005201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis16","termid":"PBO:0005201"}


id: GO:2000470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peroxidase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peroxidase activity","synonyms":[{"name":"positive regulation of donor:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"positive regulation of oxyperoxidase activity","type":"exact"},{"name":"positive regulation of peroxidase reaction","type":"exact"}],"termid":"GO:2000470"}


id: PBO:0066832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 131","termid":"PBO:0066832"}


id: PR:Q9P372
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle 14 kDa protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12013:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit srp14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.09","secondary_identifiers":["UniProtKB:Q9P372"],"synonyms":[{"name":"SPAC19B12.09","type":"related"},{"name":"Spom972h-SRP14","type":"exact"},{"name":"signal recognition particle 14 kDa protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P372"}


id: GO:0002645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction","synonyms":[{"name":"activation of tolerance induction","type":"narrow"},{"name":"stimulation of tolerance induction","type":"narrow"},{"name":"up regulation of tolerance induction","type":"exact"},{"name":"up-regulation of tolerance induction","type":"exact"},{"name":"upregulation of tolerance induction","type":"exact"}],"termid":"GO:0002645"}


id: PBO:0056180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF bZIP transcription factor F","termid":"PBO:0056180"}


id: PBO:0059762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 36","termid":"PBO:0059762"}


id: MONDO:0030314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease (infantile ulcerative colitis) 31, autosomal recessive","secondary_identifiers":["OMIM:619398","UMLS:C5444224","MEDGEN:1783277"],"synonyms":[{"name":"IBD31","type":"exact"},{"name":"inflammatory bowel disease (infantile ulcerative colitis) 31","type":"exact"},{"name":"inflammatory bowel disease (infantile ulcerative colitis) 31, autosomal recessive","type":"exact"},{"name":"inflammatory bowel disease, early-onset, autosomal recessive","type":"related"}],"termid":"MONDO:0030314","xrefs":{"Monarch":{"xref_id":"0030314"}}}


id: PBO:0059272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 1","termid":"PBO:0059272"}


id: PBO:0042566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 1B","termid":"PBO:0042566"}


id: PBO:0045534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 4","termid":"PBO:0045534"}


id: PBO:0017599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase, human RNF family homolog","termid":"PBO:0017599"}


id: MONDO:0007935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominantly inherited cystoid macular edema manifesting with macular atrophy, strabismus and, sometimes, pericentral retinitis pigmentosa. It is associated with a poor visual prognosis.","definition_xrefs":["Orphanet:75381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular retinal edema","termid":"MONDO:0003005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cystoid macular edema","secondary_identifiers":["ICD10CM:H35.5","MEDGEN:7435","NCIT:C34794","GARD:16694","DOID:4447","OMIM:153880","SCTID:312921000","UMLS:C0024440"],"synonyms":[{"name":"DCMD","type":"exact"},{"name":"Mddc","type":"related"},{"name":"autosomal dominant cystoid macular edema","type":"exact"},{"name":"autosomal dominant cystoid macular oedema","type":"exact"},{"name":"cystoid macular dystrophy","type":"related"},{"name":"familial macular edema","type":"exact"},{"name":"familial macular oedema","type":"exact"},{"name":"macular dystrophy, dominant cystoid","type":"related"},{"name":"macular edema, cystoid","type":"related"}],"termid":"MONDO:0007935","xrefs":{"Monarch":{"xref_id":"0007935"}}}


id: FYPO:0003759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and all cells produced arrest the cell cycle with a single nucleus and then die.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division","termid":"FYPO:0001042"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, cell cycle arrest","termid":"FYPO:0001924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, arrest with single nucleus","synonyms":[{"name":"inviable following spore germination, single or double cell division, arrest with single nucleus","type":"exact"},{"name":"inviable germinated spore, single or double cell division, arrest with single nucleus","type":"exact"},{"name":"lethal after spore germination, single or double cell division, arrest with single nucleus","type":"exact"}],"termid":"FYPO:0003759"}


id: PBO:0002618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthetase Ade2","termid":"PBO:0002618"}


id: GO:0140706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein-containing complex localization by which the complex is transported to, or maintained in, the centriolar satellite.","definition_xrefs":["PMID:27979967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein-containing complex localization to centriolar satellite","termid":"GO:0140706"}


id: GO:0060592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process pertaining to the initial formation of the mammary gland from unspecified parts. The process begins with formation of the mammary line and ends when the solid mammary bud invades the primary mammary mesenchyme.","definition_xrefs":["PMID:16168142","GOC:dph","PMID:17120154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"mammary gland morphogenesis","termid":"GO:0060443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland formation","synonyms":[{"name":"mammary bud formation","type":"related"},{"name":"mammary line formation","type":"narrow"},{"name":"mammary placode formation","type":"narrow"},{"name":"mammary sprout formation","type":"related"}],"termid":"GO:0060592"}


id: MONDO:0015874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign ductal tumor of breast","secondary_identifiers":["Orphanet:180284"],"termid":"MONDO:0015874","xrefs":{"Monarch":{"xref_id":"0015874"}}}


id: MONDO:0022694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral calcifications opalescent teeth phosphaturia","termid":"MONDO:0022694","xrefs":{"Monarch":{"xref_id":"0022694"}}}


id: PBO:0038986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor alpha 2C","termid":"PBO:0038986"}


id: PR:O94618
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim21 gene.","definition_xrefs":["UniProtKB:O94618","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.09","synonyms":[{"name":"Spom972h-tim21","type":"exact"}],"termid":"PR:O94618"}


id: PBO:0112808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gocam_id","termid":"PBO:0112808"}


id: GO:2000262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation, common pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"is_a","term_name":"regulation of blood coagulation, common pathway","termid":"GO:2000260"},{"relation_name":"positively_regulates","term_name":"blood coagulation, common pathway","termid":"GO:0072377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"positive regulation of blood coagulation, common pathway","termid":"GO:2000262"}


id: FYPO:0002539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to nucleoplasm","termid":"FYPO:0002532"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea","termid":"FYPO:0002537"},{"relation_name":"is_a","term_name":"delayed onset of protein localization to mitotic spindle","termid":"FYPO:0003226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm during cellular response to hydroxyurea","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to HU","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002539"}


id: PBO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme (predicted)","termid":"PBO:0002287"}


id: GO:0033056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-ornithine, the D-enantiomer of the amino acid ornithine, i.e. (2R)-2,5-diaminopentanoic acid.","definition_xrefs":["GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"D-ornithine metabolic process","synonyms":[{"name":"D-ornithine metabolism","type":"exact"}],"termid":"GO:0033056"}


id: GO:0046065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dCTP, deoxycytidine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dCTP metabolic process","synonyms":[{"name":"dCTP metabolism","type":"exact"}],"termid":"GO:0046065"}


id: PBO:0002871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomeric 2,3-bisphosphoglycerate (BPG)-dependent phosphoglycerate mutase (PGAM), Gpm1","termid":"PBO:0002871"}


id: PBO:0069222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 477, pseudogene","termid":"PBO:0069222"}


id: PBO:0088513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lis1 homology and WD repeat protein","termid":"PBO:0088513"}


id: MONDO:0011182
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018767"}]},"cv_name":"mondo","definition":"A rare inborn error of metabolism characterized by the presence of large amounts of trimethylamine in urine, sweat, and breath, resulting in a fishy body odor in affected individuals.","direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylglycine dehydrogenase deficiency","termid":"MONDO:0011610"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"trimethylaminuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:685690588","SCTID:237959005","UMLS:C0342739","HP:0003614","MEDGEN:83350","Orphanet:35056"],"synonyms":[{"name":"TMAU","type":"related"},{"name":"TMAuria","type":"related"},{"name":"fish malodor syndrome","type":"related"},{"name":"fish odor syndrome","type":"exact"},{"name":"fish odour syndrome","type":"exact"},{"name":"fish-odor syndrome","type":"exact"},{"name":"stale fish syndrome","type":"related"},{"name":"trimethylaminuria","type":"exact"},{"name":"trimethylaminuria (disease)","type":"exact"}],"termid":"MONDO:0011182","terms_by_termid":{"MONDO:0018767":null},"xrefs":{"Monarch":{"xref_id":"0011182"}}}


id: MONDO:1011560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephroma that occurs in ducks.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"nephroma, non-human animal","termid":"MONDO:1011438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephroma, ducks","secondary_identifiers":["OMIA:001113-8835"],"termid":"MONDO:1011560","xrefs":{"Monarch":{"xref_id":"1011560"}}}


id: GO:0180003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-homocysteine(out) + S-adenosyl-L-methionine(in) = S-adenosyl-L-homocysteine(in) + S-adenosyl-L-methionine(out).","definition_xrefs":["PMID:14674884","PMID:34375635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosyl-L-methionine transmembrane transporter activity","termid":"GO:0000095"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"purine nucleoside transmembrane transporter activity","termid":"GO:0015211"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"S-adenosyl-L-methionine:S-adenosyl-L-homocysteine antiporter activity","secondary_identifiers":["RHEA:75479"],"termid":"GO:0180003"}


id: PBO:0054218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1599","termid":"PBO:0054218"}


id: PBO:0059696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 4","termid":"PBO:0059696"}


id: PBO:0017668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Rieske ISP assembly ATPase Bcs1 (predicted)","termid":"PBO:0017668"}


id: GO:0031024
data:
  {"annotated_genes":["SJAG_03052","SJAG_03264"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101813,112208],"is_not":false,"summary":null,"term":"GO:0031024"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components, including gamma-tubulin and other proteins, to form an interphase microtubule organizing center.","definition_xrefs":["GOC:mah","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03052":null,"SJAG_03264":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"interphase microtubule organizing center assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"interphase microtubule organising center biosynthesis","type":"exact"},{"name":"interphase microtubule organising center formation","type":"exact"},{"name":"interphase microtubule organizing center biogenesis","type":"related"},{"name":"interphase microtubule organizing centre assembly","type":"exact"}],"termid":"GO:0031024","terms_by_termid":{"GO:0031024":null}}


id: GO:0048055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R2 and R5 pair of photoreceptors in the eye over time, from their formation to the mature structures. R2 and R5 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R2/R5 cell differentiation","termid":"GO:0048054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R2/R5 development","termid":"GO:0048055"}


id: PBO:0082231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha' catalytic subunit of casein kinase 2 (CK2); CK2 is a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; protein abundance increases in response to DNA replication stress; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082231"}


id: FYPO:0001616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-valine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular valine level","synonyms":[{"name":"decreased cellular L-valine level","type":"exact"},{"name":"decreased cellular valine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular valine level during vegetative growth","type":"exact"},{"name":"decreased level of valine in cell","type":"exact"},{"name":"reduced cellular valine level","type":"exact"},{"name":"reduced level of valine in cell","type":"exact"}],"termid":"FYPO:0001616"}


id: PBO:0003546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex large subunit Rpc1 (predicted)","termid":"PBO:0003546"}


id: GO:0004698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Calcium-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction is activated in the presence of diacylglycerol and calcium.","definition_xrefs":["PMID:34834162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diacylglycerol-dependent serine/threonine kinase activity","termid":"GO:0004697"},{"relation_name":"is_a","term_name":"calcium-dependent protein serine/threonine kinase activity","termid":"GO:0009931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140096","GO:0004672","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"calcium,diacylglycerol-dependent serine/threonine kinase activity","secondary_identifiers":["Reactome:R-HSA-114683","Reactome:R-HSA-416639","Reactome:R-HSA-421007","Reactome:R-HSA-8986937","Reactome:R-HSA-9005561","Reactome:R-HSA-114684"],"synonyms":[{"name":"calcium-dependent PKC activity","type":"exact"},{"name":"conventional protein kinase C activity","type":"exact"}],"termid":"GO:0004698"}


id: PBO:0056583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter dominant negative subunit beta","termid":"PBO:0056583"}


id: PBO:0012262
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GPM1","termid":"PBO:0012262"}


id: PBO:0042726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein C pseudogene 1","termid":"PBO:0042726"}


id: GO:2001153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renal water transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of renal water transport","termid":"GO:2001151"},{"relation_name":"positively_regulates","term_name":"renal water transport","termid":"GO:0003097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of renal water transport","termid":"GO:2001153"}


id: MONDO:0021064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant extra-adrenal parasympathetic paraganglioma arising from paraganglia in the base of the skull and middle ear.","definition_xrefs":["NCIT:C3061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base neoplasm","termid":"MONDO:0002785"},{"relation_name":"is_a","term_name":"head and neck paraganglioma","termid":"MONDO:0006239"},{"relation_name":"is_a","term_name":"parasympathetic paraganglioma","termid":"MONDO:0021052"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jugulotympanic paraganglioma","secondary_identifiers":["MEDGEN:4905","SCTID:127030001","UMLS:C0017671","ICD9:239.7","ICDO:8690/1"],"synonyms":[{"name":"Glomus tumor","type":"related"},{"name":"Glomus tumour","type":"related"},{"name":"Paraganglioma - glomus jugulare","type":"related"},{"name":"basicranium parasympathetic paraganglioma","type":"exact"},{"name":"glomus jugulare neoplasm","type":"exact"},{"name":"glomus jugulare tumor","type":"exact"},{"name":"glomus jugulare tumour","type":"exact"},{"name":"jugular body neoplasm","type":"exact"},{"name":"jugular body neoplasm (disease)","type":"exact"},{"name":"jugular body tumor","type":"exact"},{"name":"jugular body tumour","type":"exact"},{"name":"jugular paraganglioma","type":"exact"},{"name":"jugulotympanic paraganglioma","type":"exact"},{"name":"neoplasm of glomus jugulare","type":"exact"},{"name":"neoplasm of jugular body","type":"exact"},{"name":"neoplasm of the glomus jugulare","type":"exact"},{"name":"parasympathetic paraganglioma of basicranium","type":"exact"},{"name":"tumor of glomus jugulare","type":"exact"},{"name":"tumor of jugular body","type":"exact"},{"name":"tumor of the glomus jugulare","type":"exact"},{"name":"tumour of glomus jugulare","type":"exact"},{"name":"tumour of jugular body","type":"exact"},{"name":"tumour of the glomus jugulare","type":"exact"}],"termid":"MONDO:0021064","xrefs":{"Monarch":{"xref_id":"0021064"}}}


id: PATO:0000208
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000208 defensive function (obsolete PATO:0000208)","termid":"PATO:0000208"}


id: GO:0072257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the metanephric nephron tubule as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072257"}


id: GO:0010494
data:
  {"annotated_genes":["SJAG_02419","SJAG_00391","SJAG_05010","SJAG_01317","SJAG_03157","SJAG_02164","SJAG_00686","SJAG_01479","SJAG_04772","SJAG_03424","SJAG_04744","SJAG_04640","SJAG_02573","SJAG_01222","SJAG_03276","SJAG_01512","SJAG_03498","SJAG_04672","SJAG_04427","SJAG_00544","SJAG_03696","SJAG_02663","SJAG_01954","SJAG_03762","SJAG_03277","SJAG_02592","SJAG_04342","SJAG_03283","SJAG_01650","SJAG_02628","SJAG_03023","SJAG_00474","SJAG_05694","SJAG_16457","SJAG_16454","SJAG_01026","SJAG_02995","SJAG_02263","SJAG_00507","SJAG_04480","SJAG_03214","SJAG_01159","SJAG_02239","SJAG_01548"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72518,74192,78970,87038,87871,88665,88992,89206,89411,89701,89778,89820,89830,89868,91056,92055,92514,92515,93867,94057,94058,94286,95585,96609,97282,98012,98426,99420,102234,104673,104784,105044,105133,105134,106132,106405,109340,109440,110519,111450,112764,112984,113060,116723],"is_not":false,"summary":null,"term":"GO:0010494"}]},"cv_name":"cellular_component","definition":"A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.","definition_xrefs":["GOC:ans","PMID:17601829","PMID:20368989","PMID:17967451","PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00391":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_01026":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01650":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02663":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03498":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_04342":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic stress granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Stress_granule"],"synonyms":[{"name":"cytoplasmic mRNP granule","type":"exact"},{"name":"stress granule","type":"exact"}],"termid":"GO:0010494","terms_by_termid":{"GO:0010494":null}}


id: GO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete apelin-like receptor (obsolete GO:0001597)","synonyms":[{"name":"APJ-like receptor","type":"exact"},{"name":"apelin-like receptor","type":"exact"}],"termid":"GO:0001597"}


id: GO:0003181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the atrioventricular valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve morphogenesis","termid":"GO:0003179"},{"relation_name":"part_of","term_name":"atrioventricular valve development","termid":"GO:0003171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular valve morphogenesis","synonyms":[{"name":"AV valve morphogenesis","type":"exact"}],"termid":"GO:0003181"}


id: PBO:0060737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 2","termid":"PBO:0060737"}


id: GO:1902375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any tRNA 3'-trailer cleavage, endonucleolytic that takes place in nucleus.","definition_xrefs":["GOC:TermGenie","PMID:23928301"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear tRNA 3'-trailer cleavage, endonucleolytic (obsolete GO:1902375)","synonyms":[{"name":"endonucleolytic tRNA 3'-end cleavage in cell nucleus","type":"exact"},{"name":"endonucleolytic tRNA 3'-end cleavage in nucleus","type":"exact"},{"name":"endonucleolytic tRNA 3'-trailer cleavage in cell nucleus","type":"related"},{"name":"endonucleolytic tRNA 3'-trailer cleavage in nucleus","type":"related"},{"name":"tRNA 3'-end cleavage, endonucleolytic in cell nucleus","type":"exact"},{"name":"tRNA 3'-end cleavage, endonucleolytic in nucleus","type":"exact"},{"name":"tRNA 3'-trailer cleavage, endonucleolytic in cell nucleus","type":"exact"}],"termid":"GO:1902375"}


id: PBO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0B","termid":"PBO:0002328"}


id: FYPO:0002209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in a population of spores are viable, and all have a larger volume than normal and an abnormal shape. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable swollen spore population with abnormal spore shape (obsolete FYPO:0002209)","synonyms":[{"name":"inviable enlarged spore population with abnormal spore shape","type":"related"},{"name":"inviable large spore population with abnormal spore shape","type":"related"},{"name":"inviable population of swollen spores with abnormal shape","type":"exact"},{"name":"inviable spore population with increased cell size and abnormal spore shape","type":"related"},{"name":"inviable spore population with increased cell volume and abnormal spore shape","type":"exact"},{"name":"inviable swollen spore population with abnormal shape","type":"exact"}],"termid":"FYPO:0002209"}


id: GO:0010213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA repair process that is involved in repairing UV-induced DNA damage under non-photoreactivating conditions. The mechanism by which this repair process operates has not yet been completely elucidated.","definition_xrefs":["GOC:syr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"non-photoreactive DNA repair","synonyms":[{"name":"light-independent DNA repair","type":"exact"}],"termid":"GO:0010213"}


id: PBO:0038598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase very long chain","termid":"PBO:0038598"}


id: GO:1902188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of viral release from host cell.","definition_xrefs":["GOC:TermGenie","PMID:18305167"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of viral release from host cell (obsolete GO:1902188)","synonyms":[{"name":"activation of release of virus from host","type":"exact"},{"name":"activation of viral exit","type":"exact"},{"name":"activation of viral release","type":"exact"},{"name":"activation of viral release from host cell","type":"narrow"},{"name":"activation of viral shedding","type":"exact"},{"name":"positive regulation of release of virus from host","type":"exact"},{"name":"positive regulation of viral exit","type":"exact"},{"name":"positive regulation of viral release","type":"exact"},{"name":"positive regulation of viral shedding","type":"exact"},{"name":"up regulation of release of virus from host","type":"exact"},{"name":"up regulation of viral exit","type":"exact"},{"name":"up regulation of viral release","type":"exact"},{"name":"up regulation of viral release from host cell","type":"exact"},{"name":"up regulation of viral shedding","type":"exact"},{"name":"up-regulation of release of virus from host","type":"exact"},{"name":"up-regulation of viral exit","type":"exact"},{"name":"up-regulation of viral release","type":"exact"},{"name":"up-regulation of viral release from host cell","type":"exact"},{"name":"up-regulation of viral shedding","type":"exact"},{"name":"upregulation of release of virus from host","type":"exact"},{"name":"upregulation of viral exit","type":"exact"},{"name":"upregulation of viral release","type":"exact"},{"name":"upregulation of viral release from host cell","type":"exact"},{"name":"upregulation of viral shedding","type":"exact"}],"termid":"GO:1902188"}


id: PBO:0079024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 7-1","termid":"PBO:0079024"}


id: FYPO:0002919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 36 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"},{"relation_name":"is_a","term_name":"abnormal histone H3-K36 methylation during vegetative growth","termid":"FYPO:0002918"},{"relation_name":"is_a","term_name":"abolished protein lysine methylation during vegetative growth","termid":"FYPO:0004488"},{"relation_name":"is_a","term_name":"abolished histone H3-K36 methylation","termid":"FYPO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone H3-K36 methylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K36 methylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K36 methylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K36me during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K36 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K36 methylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K36 methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002919"}


id: PBO:0052549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C2","termid":"PBO:0052549"}


id: PBO:0031501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_fatty_acid_synthase_activity","termid":"PBO:0031501"}


id: PR:Q9UT83
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug28 gene.","definition_xrefs":["UniProtKB:Q9UT83","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 28 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.07","synonyms":[{"name":"Spom972h-mug28","type":"exact"}],"termid":"PR:Q9UT83"}


id: PBO:0030858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_calcium_level_during_cellular_response_to_salt_stress","termid":"PBO:0030858"}


id: PBO:0056567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipin TRP cation channel 2","termid":"PBO:0056567"}


id: GO:1902196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isovaleryl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:11231285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"isovaleryl-CoA(4-) metabolic process","termid":"GO:1902195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0006790","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"isovaleryl-CoA(4-) catabolic process","synonyms":[{"name":"isovaleryl-CoA(4-) breakdown","type":"exact"},{"name":"isovaleryl-CoA(4-) catabolism","type":"exact"},{"name":"isovaleryl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902196"}


id: FYPO:0002302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is spheroid, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, spheroid cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, rounded cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, spheroid cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, spheroid cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, spheroid cell","type":"exact"}],"termid":"FYPO:0002302"}


id: GO:1990330
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex involved in the sulfur transfer during iron-sulfur cluster assembly and in the modification of tRNA wobble positions. In E. coli it consists of a central IscS dimer with the IscU protomers attached to one of the IscS units each via a disulfide (-SSH) group.","definition_xrefs":["GOC:bhm","PMID:20404999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine desulfurase complex","termid":"GO:1990221"},{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly complex","termid":"GO:1990229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005829","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"IscS-IscU complex","termid":"GO:1990330"}


id: GO:0030381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the structural pattern of a chorion-containing eggshell such as those found in insects.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"chorion-containing eggshell formation","termid":"GO:0007304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorion-containing eggshell pattern formation","termid":"GO:0030381"}


id: GO:0015689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of molybdate (MoO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Molybdate is the bivalent anion derived from molybdic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"molybdate ion transport","termid":"GO:0015689"}


id: PBO:0048173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP stress granule assembly factor 2","termid":"PBO:0048173"}


id: MONDO:0015564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Castleman disease (CD) is a benign lymphoproliferative disorder that may present as a localized or multicentric form. The clinical manifestations are heterogeneous, ranging from asymptomatic discrete lymphadenopathy to recurrent episodes of diffuse lymphadenopathy with severe systemic symptoms.","definition_xrefs":["Orphanet:160"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"human herpesvirus 8-related tumor","termid":"MONDO:0015157"},{"relation_name":"excluded_subClassOf","term_name":"lymphoid hemopathy","termid":"MONDO:0015757"},{"relation_name":"is_a","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Castleman disease","secondary_identifiers":["DOID:0111157","GARD:12656","ICD10CM:D47.Z2","MedDRA:10050251","MEDGEN:42211","MESH:D005871","NCIT:C3056","NORD:898","SCTID:207036003","UMLS:C0017531","icd11.foundation:1940989685"],"synonyms":[{"name":"AFLH","type":"exact"},{"name":"ALNH","type":"related"},{"name":"Castleman disease","type":"exact"},{"name":"Castleman's disease","type":"exact"},{"name":"Castleman's tumor","type":"exact"},{"name":"Castleman's tumour","type":"exact"},{"name":"GLNH","type":"exact"},{"name":"angiofollicular ganglionic hyperplasia","type":"exact"},{"name":"angiofollicular lymph hyperplasia","type":"exact"},{"name":"angiofollicular lymph node hyperplasia","type":"exact"},{"name":"angiofollicular lymphoid hyperplasia","type":"exact"},{"name":"giant lymph node hyperplasia","type":"exact"},{"name":"lymphoid hamartoma","type":"exact"}],"termid":"MONDO:0015564","xrefs":{"Monarch":{"xref_id":"0015564"}}}


id: GO:0103077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-3-glucoside + UDP-L-rhamnose = quercetin-3-O-glucoside-7-O-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin 3-glucoside 7-O-rhamnosyltransferase activity (obsolete GO:0103077)","termid":"GO:0103077"}


id: GO:1904124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a microglial cell from one site to another.","definition_xrefs":["PMID:19100238","GOC:TermGenie","GOC:BHF","GOC:nc","GO_REF:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"},{"relation_name":"is_a","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell migration","termid":"GO:1904124"}


id: FYPO:0006590
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the endoplasmic reticulum is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to endoplasmic reticulum","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to endoplasmic reticulum","type":"exact"},{"name":"protein mislocalised to endoplasmic reticulum","type":"exact"},{"name":"protein mislocalized to ER","type":"exact"}],"termid":"FYPO:0006590","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: MONDO:0016596
data:
  {"annotated_genes":["SJAG_03506","SJAG_06383","SJAG_00295","SJAG_00068","SJAG_04975"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009398"},{"annotations":[85692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013882"},{"annotations":[86118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014318"},{"annotations":[86396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014457"},{"annotations":[85299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014780"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_03506":null,"SJAG_04975":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0002525"],"is_obsolete":false,"name":"hyperphosphatasia-intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:239300","Orphanet:247262","SCTID:33982008","UMLS:C1855923","GARD:17188","DOID:0070431","MEDGEN:383800"],"synonyms":[{"name":"HPMR","type":"exact"},{"name":"Mabry syndrome","type":"exact"},{"name":"hyperphosphatasia with intellectual disability syndrome","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome","type":"exact"}],"termid":"MONDO:0016596","terms_by_termid":{"MONDO:0009398":null,"MONDO:0013882":null,"MONDO:0014318":null,"MONDO:0014457":null,"MONDO:0014780":null},"xrefs":{"Monarch":{"xref_id":"0016596"}}}


id: PBO:0068736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 7, pseudogene","termid":"PBO:0068736"}


id: GO:0120103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which assembles on the mother centriole during cilium formation, adjacent and proximal to a centriolar distal appendage. In human, it contains ODF2, CNTRL, NIN, CCDC120c and CCDC68.","definition_xrefs":["GOC:cilia","PMID:28422092","PMID:23213374","PMID:27818179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"centriolar subdistal appendage","synonyms":[{"name":"subdistal appendage of basal body","type":"exact"},{"name":"subdistal appendage of centriole","type":"exact"},{"name":"subdistal appendage of mother centriole","type":"exact"}],"termid":"GO:0120103"}


id: PBO:0041626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cache domain containing 1","termid":"PBO:0041626"}


id: PBO:0017434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_during","termid":"PBO:0017434"}


id: PBO:0086744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possibly involved in zinc homeostasis; Bdf1p-dependent transcription induced by salt stress; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086744"}


id: GO:1900304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of laminaritriose transport","termid":"GO:1900303"},{"relation_name":"negatively_regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of laminaritriose transport","synonyms":[{"name":"down regulation of laminaritriose transport","type":"exact"},{"name":"down-regulation of laminaritriose transport","type":"exact"},{"name":"downregulation of laminaritriose transport","type":"exact"},{"name":"inhibition of laminaritriose transport","type":"narrow"}],"termid":"GO:1900304"}


id: GO:0010459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency or rate of heart contraction.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"negative regulation of heart contraction","termid":"GO:0045822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart rate","termid":"GO:0010459"}


id: PBO:0081636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 564","termid":"PBO:0081636"}


id: GO:0043514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-12 alpha (p35, product of the IL12A gene) and an interleukin-12 beta subunit (p40, product of the IL12B gene) and is secreted into the extracellular space.","definition_xrefs":["GOC:mah","PMID:1381512","GOC:add","GOC:ebc","PMID:12948519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-12 complex","synonyms":[{"name":"IL-12 complex","type":"exact"},{"name":"IL12A","type":"narrow"},{"name":"IL12B","type":"narrow"},{"name":"p35","type":"narrow"},{"name":"p40","type":"narrow"}],"termid":"GO:0043514"}


id: PBO:0050970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 5","termid":"PBO:0050970"}


id: PBO:0064148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 1","termid":"PBO:0064148"}


id: GO:0071539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the centrosome.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to centrosome","synonyms":[{"name":"protein localisation to centrosome","type":"exact"}],"termid":"GO:0071539"}


id: GO:0047794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arogenate + NAD+ = L-tyrosine + NADH + CO2.","definition_xrefs":["EC:1.3.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclohexadienyl dehydrogenase activity","secondary_identifiers":["MetaCyc:CYCLOHEXADIENYL-DEHYDROGENASE-RXN","RHEA:12256"],"synonyms":[{"name":"L-arogenate:NAD(+) oxidoreductase activity","type":"related"},{"name":"L-arogenate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"L-arogenate:NAD+ oxidoreductase activity","type":"related"},{"name":"arogenate dehydrogenase activity","type":"related"},{"name":"arogenic dehydrogenase activity","type":"related"},{"name":"pretyrosine dehydrogenase activity","type":"related"}],"termid":"GO:0047794"}


id: MONDO:0017796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ameloblastic carcinoma (obsolete MONDO:0017796)","termid":"MONDO:0017796","xrefs":{"Monarch":{"xref_id":"0017796"}}}


id: GO:0010976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"positively_regulates","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron projection development","synonyms":[{"name":"positive regulation of neurite biosynthesis","type":"narrow"},{"name":"positive regulation of neurite development","type":"narrow"},{"name":"positive regulation of neurite formation","type":"narrow"},{"name":"positive regulation of neurite growth","type":"narrow"}],"termid":"GO:0010976"}


id: PBO:0053446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 393","termid":"PBO:0053446"}


id: GO:0004719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester.","definition_xrefs":["EC:2.1.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"protein carboxyl O-methyltransferase activity","termid":"GO:0051998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0016741","GO:0003824","GO:0008276"],"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.77-RXN","RHEA:12705","Reactome:R-HSA-5676966"],"synonyms":[{"name":"D-aspartyl/L-isoaspartyl methyltransferase activity","type":"related"},{"name":"L-aspartyl/L-isoaspartyl protein methyltransferase activity","type":"related"},{"name":"L-isoaspartyl protein carboxyl methyltransferase activity","type":"related"},{"name":"L-isoaspartyl/D-aspartyl protein carboxyl methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:protein-L-isoaspartate O-methyltransferase activity","type":"related"},{"name":"protein (D-aspartate) methyltransferase activity","type":"related"},{"name":"protein D-aspartate methyltransferase activity","type":"related"},{"name":"protein L-isoaspartate methyltransferase activity","type":"related"},{"name":"protein L-isoaspartyl methyltransferase activity","type":"related"},{"name":"protein O-methyltransferase (L-isoaspartate)","type":"related"},{"name":"protein beta-aspartate O-methyltransferase activity","type":"related"},{"name":"protein-L-isoaspartate O-methyltransferase activity","type":"related"},{"name":"protein-L-isoaspartate(D-aspartate) O-methyltransferase activity","type":"related"},{"name":"protein-beta-aspartate O-methyltransferase activity","type":"related"}],"termid":"GO:0004719"}


id: GO:0043387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a mycotoxin, any poisonous substance produced by a fungus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin catabolic process","termid":"GO:0009407"},{"relation_name":"is_a","term_name":"mycotoxin metabolic process","termid":"GO:0043385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0019748","GO:0008150","GO:0098754"],"is_obsolete":false,"name":"mycotoxin catabolic process","synonyms":[{"name":"mycotoxin breakdown","type":"exact"},{"name":"mycotoxin catabolism","type":"exact"},{"name":"mycotoxin degradation","type":"exact"}],"termid":"GO:0043387"}


id: GO:0008324
data:
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id: GO:1903259
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id: MONDO:0700266
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id: PBO:0057696
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id: PBO:0052814
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id: MONDO:0005747
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id: PBO:0029932
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id: MONDO:0001462
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id: GO:0034377
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id: PBO:0075863
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id: PBO:0056874
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id: PBO:0069631
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id: GO:0070005
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id: PBO:0049078
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id: PBO:0074519
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id: MONDO:0012637
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id: PR:Q9C115
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id: GO:0062144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-amino-4-chloropent-4-enoate = chloride + H+ + L-propargylglycine.","definition_xrefs":["PMID:30867596","RHEA:59892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"L-propargylglycine synthase activity","termid":"GO:0062144"}


id: MOD:00397
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with iodoacetamide, usually replacement of a reactive hydrogen with a methylcarboxamido group.","definition_xrefs":["Unimod:4","PubMed:11510821","PubMed:11327326","PubMed:12422359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized residue","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"}],"termid":"MOD:00397"}


id: MONDO:0000636
data:
  {"annotated_genes":["SJAG_00031","SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[86214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the musculoskeletal system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_02855":null},"genotype_count":0,"is_obsolete":false,"name":"musculoskeletal system benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5237920","MEDGEN:1709701","DOID:0060099"],"synonyms":[{"name":"musculoskeletal system benign neoplasm","type":"exact"}],"termid":"MONDO:0000636","terms_by_termid":{"MONDO:0007908":null,"MONDO:0010621":null},"xrefs":{"Monarch":{"xref_id":"0000636"}}}


id: PBO:0051991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAKMIP2 antisense RNA 1","termid":"PBO:0051991"}


id: PBO:0052428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIT ligand","termid":"PBO:0052428"}


id: PBO:0055010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2425","termid":"PBO:0055010"}


id: PBO:0076632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBL1XR1 antisense RNA 1","termid":"PBO:0076632"}


id: PR:000027629
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated in RxxS motifs by Sid2 family kinases. UniProtKB:Q9P7H1-1, Ser-396/Ser-408/Ser-467/Ser-468/Ser-493/Ser-513, MOD:00046.","definition_xrefs":["PMID:18951025","PMID:16085489","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clp1/Phos(S396,S408,S467,S468,S493,S513)","pombase_gene_id":"SPAC1782.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: tyrosine-protein phosphatase Clp1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-CDC14/Phos:1","type":"exact"},{"name":"Spom-clp1/Phos:1","type":"exact"},{"name":"clip1p phosphorylated","type":"related"},{"name":"clp1/Phos(S396,S408,S467,S468,S493,S513)","type":"exact"},{"name":"flp1p phosphorylated","type":"related"},{"name":"tyrosine-protein phosphatase CDC14 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000027629"}


id: GO:0047897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydrofolate + ATP + formate = 10-formyldihydrofolate + ADP + H+ + phosphate.","definition_xrefs":["RHEA:24328","EC:6.3.4.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"formate-dihydrofolate ligase activity","secondary_identifiers":["MetaCyc:FORMATE--DIHYDROFOLATE-LIGASE-RXN","KEGG_REACTION:R02238"],"synonyms":[{"name":"dihydrofolate formyltransferase activity","type":"related"},{"name":"formate:dihydrofolate ligase (ADP-forming)","type":"related"},{"name":"formyl dihydrofolate synthase activity","type":"related"}],"termid":"GO:0047897"}


id: FYPO:0002534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abolished during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleoplasm","termid":"FYPO:0002531"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide","termid":"FYPO:0002533"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during cellular response to hydrogen peroxide","termid":"FYPO:0004835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to nucleoplasm during cellular response to hydrogen peroxide","synonyms":[{"name":"abolished protein localisation to nucleoplasm during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein localization to nucleoplasm during cellular response to H2O2","type":"exact"},{"name":"abolished protein localization to nucleoplasm during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleoplasm during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"protein localization to nucleoplasm abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002534"}


id: MONDO:0015718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 12 is a rare chromosomal anomaly syndrome, with a highly variable phenotype, principally characterized by developmental or growth delay, short stature, craniofacial dysmorphism (e.g. turricephaly, tall forehead, downslanting palpebral fissures, posteriorly rotated and low set ears, narrow palate), congenital heart defects (e.g. atrial septal defect, patent ductus arteriosus), hypotonia, and pigmentary dysplasia. Scoliosis, hearing loss, facial/body asymmetry, and intellectual disability have also been reported.","definition_xrefs":["Orphanet:1698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 12 disorder","termid":"MONDO:0700019"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 12","secondary_identifiers":["SCTID:764463001","UMLS:C4706889","GARD:5304","MEDGEN:1631133"],"synonyms":[{"name":"Mosaic trisomy chromosome 12","type":"exact"},{"name":"Mosaic trisomy type 12","type":"exact"},{"name":"trisomy 12 mosaicism","type":"exact"}],"termid":"MONDO:0015718","xrefs":{"Monarch":{"xref_id":"0015718"}}}


id: MONDO:0016733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, slow growing neuroepithelial neoplasm composed of neoplastic, mature ganglion cells and neoplastic glial cells. Some gangliogliomas show anaplastic features in their glial component and are considered to be WHO grade III. Rare cases of newly diagnosed gangliogliomas with grade IV (glioblastoma) changes in the glial component have also been reported. (Adapted from WHO)","definition_xrefs":["NCIT:C3788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ganglioglioma","secondary_identifiers":["Orphanet:251949","ONCOTREE:GNG","icd11.foundation:1287417975","GARD:2430","ICDO:9505/1","SCTID:87191000119100","NANDO:2200096","UMLS:C0206716","MedDRA:10017701","EFO:0003094","MEDGEN:60216","MESH:D018303","DOID:5078"],"synonyms":[{"name":"CNS ganglioglioma","type":"exact"},{"name":"adult ganglioglioma","type":"narrow"},{"name":"childhood ganglioglioma","type":"narrow"},{"name":"ganglioglioma","type":"exact"},{"name":"mixed cell tumors containing both neural ganglionic cells and neural glial cell components","type":"related"},{"name":"mixed cell tumours containing both neural ganglionic cells and neural glial cell components","type":"related"}],"termid":"MONDO:0016733","xrefs":{"Monarch":{"xref_id":"0016733"}}}


id: SO:0000986
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The attribute of whether a nucleotide polymer is linear or circular.","direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topology_attribute","synonyms":[{"name":"topology attribute","type":"exact"}],"termid":"SO:0000986"}


id: PBO:0071932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 9","termid":"PBO:0071932"}


id: PBO:0058473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5581","termid":"PBO:0058473"}


id: GO:0102287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-coumaryl-CoA + 3-oxooctanoyl-CoA + H2O = 4-coumaroylhexanoylmethane + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-coumaroylhexanoylmethane synthase activity (obsolete GO:0102287)","termid":"GO:0102287"}


id: PBO:0076042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 39","termid":"PBO:0076042"}


id: GO:0055096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of low-density lipoprotein particle.","definition_xrefs":["GOC:rl","PMID:16013438","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle mediated signaling","termid":"GO:0055095"},{"relation_name":"part_of","term_name":"cellular response to low-density lipoprotein particle stimulus","termid":"GO:0071404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle mediated signaling","synonyms":[{"name":"low-density lipoprotein mediated signalling","type":"exact"},{"name":"low-density lipoprotein particle mediated signal transduction","type":"exact"},{"name":"low-density lipoprotein particle-mediated signaling","type":"exact"}],"termid":"GO:0055096"}


id: PBO:0064427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 4 pseudogene 1","termid":"PBO:0064427"}


id: GO:0070394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoteichoic acid, which is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.","definition_xrefs":["PMID:14665680","PMID:16020688","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoteichoic acid metabolic process","synonyms":[{"name":"LTA metabolic process","type":"exact"},{"name":"lipoteichoic acid metabolism","type":"exact"}],"termid":"GO:0070394"}


id: FYPO:0000591
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000595"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transposition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal transposition","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"abnormal transposable element transposition","type":"exact"},{"name":"abnormal transposition during mitotic cell cycle","type":"related"},{"name":"abnormal transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: abnormal","type":"related"}],"termid":"FYPO:0000591","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0000595":null,"FYPO_EXT:0000001":null}}


id: GO:0005034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Sensing extracellular osmolarity to initiate a change in cell activity, and spanning the membrane of the cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0140299","GO:0098772","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"osmosensor activity","termid":"GO:0005034"}


id: PBO:0050643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 8, pseudogene","termid":"PBO:0050643"}


id: GO:0009087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"methionine metabolic process","termid":"GO:0006555"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0044248","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"methionine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:met"],"synonyms":[{"name":"methionine breakdown","type":"exact"},{"name":"methionine catabolism","type":"exact"},{"name":"methionine degradation","type":"exact"}],"termid":"GO:0009087"}


id: MONDO:0011135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superior transverse scapular ligament, calcification of, familial","secondary_identifiers":["UMLS:C1866424","OMIM:601708","MEDGEN:355711","MESH:C566638"],"synonyms":[{"name":"superior transverse scapular ligament, calcification of, familial","type":"exact"}],"termid":"MONDO:0011135","xrefs":{"Monarch":{"xref_id":"0011135"}}}


id: PATO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-D extent","termid":"PATO:0001708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thickness","termid":"PATO:0000915"}


id: GO:0061762
data:
  {"annotated_genes":["SJAG_03802","SJAG_03486","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115586,115925,117662],"is_not":false,"summary":null,"term":"GO:0061762"}]},"cv_name":"biological_process","definition":"The series of molecular signals in which calmodulin-dependent protein kinase activity enabled by a CAMKK directly activates an AMPK. The cascade begins with calmodulin binding calcium which in turn binds CAMKK enabling its calmodulin-dependent protein kinase activity. The cascade ends with AMP-activated protein kinase activity.","definition_xrefs":["PMID:23010169","GOC:PARL","GOC:dph","PMID:24709372","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03486":null,"SJAG_03501":null,"SJAG_03802":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CAMKK-AMPK signaling cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:0061762","terms_by_termid":{"GO:0061762":null}}


id: FYPO:0008304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus during one or both meiotic nuclear divisions is abolished.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during meiosis","termid":"FYPO:0002957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to nucleus during meiosis","termid":"FYPO:0008304"}


id: GO:0045890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription of homeotic genes of the trithorax group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription of homeotic gene (trithorax group) (obsolete GO:0045890)","synonyms":[{"name":"regulation of transcription of homeotic gene (trithorax group)","type":"exact"}],"termid":"GO:0045890"}


id: GO:0006267
data:
  {"annotated_genes":["SJAG_00247","SJAG_02074","SJAG_02607"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114464,102806,110013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the nuclear pre-replicative complex, a protein-DNA complex that forms at the eukaryotic DNA replication origin and is required for replication initiation.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex assembly involved in cell cycle DNA replication","termid":"GO:1902299"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0065003","GO:0006260","GO:0006259","GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear pre-replicative complex assembly","type":"exact"},{"name":"pre-RC complex assembly","type":"broad"},{"name":"pre-replicative complex assembly","type":"broad"},{"name":"pre-replicative complex formation","type":"broad"}],"termid":"GO:0006267","terms_by_termid":{"GO:1902985":null}}


id: GO:2001081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (1->4)-beta-D-galactan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"(1->4)-beta-D-galactan binding","synonyms":[{"name":"(1,4)-beta-D-galactan binding","type":"exact"}],"termid":"GO:2001081"}


id: PR:Q9UTR0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sil1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1071.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.03c","synonyms":[{"name":"Spom972h-sil1","type":"exact"}],"termid":"PR:Q9UTR0"}


id: FYECO:0000280
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leucine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited leucine","secondary_identifiers":["PMID:7565608"],"termid":"FYECO:0000280"}


id: GO:0036419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mycolate outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:md"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mycolate outer membrane (obsolete GO:0036419)","synonyms":[{"name":"integral to MOM","type":"exact"},{"name":"integral to mycolate outer membrane","type":"narrow"},{"name":"integral to mycomembrane","type":"exact"}],"termid":"GO:0036419"}


id: MONDO:0020501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crimean-Congo hemorrhagic fever (CCHF) is a tick-borne zoonotic disease caused by CCHF virus and characterized by initial fever, headache, and malaise followed by gastrointestinal symptoms and, in severe cases, bleeding, shock, and multi-organ system failure.","definition_xrefs":["Orphanet:99827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crimean-Congo hemorrhagic fever","secondary_identifiers":["icd11.foundation:1562906700","UMLS:C0019099","MESH:D006479","SCTID:402919000","DOID:12287","GARD:19690","NCIT:C34682","ICD9:065.0","MEDGEN:6800","ICD10CM:A98.0"],"synonyms":[{"name":"CCHF","type":"exact"},{"name":"CHF Congo virus","type":"exact"},{"name":"Congo fever","type":"exact"},{"name":"Congo hemorrhagic fever","type":"exact"},{"name":"Congo-Crimean hemorrhagic fever","type":"exact"},{"name":"Crimean hemorrhagic fever","type":"exact"},{"name":"Crimean hemorrhagic fever [CHF Congo virus]","type":"exact"},{"name":"Crimean-Congo haemorrhagic fever","type":"exact"}],"termid":"MONDO:0020501","xrefs":{"Monarch":{"xref_id":"0020501"}}}


id: PBO:0034481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_hydroxyurea","termid":"PBO:0034481"}


id: MONDO:0100413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly biallelic CEBPA gene mutation. (The presence of mutations in both alleles of the CEBPA gene.)","definition_xrefs":["NCIT:C157569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, biallelic CEBPA gene mutation","secondary_identifiers":["DOID:0081090"],"synonyms":[{"name":"AML, C/EBP-Alpha Biallelic Gene Mutation","type":"exact"},{"name":"AML, C/EBPalpha Biallelic Gene Mutation","type":"exact"},{"name":"AML, CCAAT Enhancer Binding Protein Alpha Biallelic Gene Mutation","type":"exact"},{"name":"AML, CCAAT/Enhancer Binding Protein Alpha Biallelic Gene Mutation","type":"exact"},{"name":"AML, CCAAT/Enhancer Binding Protein, Alpha Biallelic Gene Mutation","type":"exact"},{"name":"AML, CEBP Biallelic Gene Mutation","type":"exact"},{"name":"AML, CEBPA Biallelic Gene Mutation","type":"exact"},{"name":"AML, CEBPA Biallelic Mutation","type":"exact"},{"name":"AML, biCEBPA","type":"exact"},{"name":"AML, biallelic CEBPA gene mutation","type":"exact"}],"termid":"MONDO:0100413","xrefs":{"Monarch":{"xref_id":"0100413"}}}


id: MONDO:0002986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuromuscular disease (obsolete MONDO:0002986)","termid":"MONDO:0002986","xrefs":{"Monarch":{"xref_id":"0002986"}}}


id: GO:0060227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to the commitment of a precursor cell to a eye photoreceptor fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling pathway involved in camera-type eye photoreceptor fate commitment","synonyms":[{"name":"Notch signalling pathway involved in camera-type eye photoreceptor fate commitment","type":"exact"}],"termid":"GO:0060227"}


id: MONDO:0027766
data:
  {"annotated_genes":["SJAG_00946","SJAG_01957","SJAG_01537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012071"},{"annotations":[84623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010020"},{"annotations":[85641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958023"}]},"cv_name":"mondo","definition":"Almost complete absence of subcutaneous and/or visceral adipose tissue.","definition_xrefs":["NCIT:C131815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00946":null,"SJAG_01537":null,"SJAG_01957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"generalized lipodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4317112","HP:0009064","MEDGEN:1369615","DOID:0080298"],"synonyms":[{"name":"complete generalised lipodystrophy","type":"exact"},{"name":"complete generalized lipodystrophy","type":"exact"}],"termid":"MONDO:0027766","terms_by_termid":{"MONDO:0010020":null,"MONDO:0012071":null,"MONDO:0958023":null},"xrefs":{"Monarch":{"xref_id":"0027766"}}}


id: PBO:0066509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFX5 antisense RNA 1","termid":"PBO:0066509"}


id: MONDO:0014380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Colobomatous microphthalmia-rhizomelic dysplasia syndrome is a rare, genetic developmental defect during embryogenesis characterized by a range of developmental eye anomalies (including anophthalmia, microphthalmia, colobomas, microcornea, corectopia, cataract) and symmetric limb rhizomelia with short stature and contractures of large joints. Intellectual disability with autistic features, macrocephaly, dysmorphic features, urogenital anomalies (hypospadia, cryptorchidism), cutaneous syndactyly and precocious puberty may also be present.","definition_xrefs":["Orphanet:424099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"colobomatous microphthalmia-rhizomelic dysplasia syndrome","secondary_identifiers":["UMLS:C4014540","DOID:0111802","GARD:17707","MEDGEN:862977","OMIM:615877"],"synonyms":[{"name":"MCOPS14","type":"related"},{"name":"MCSKS","type":"related"},{"name":"microphthalmia and coloboma, with or without rhizomelic skeletal dysplasia","type":"related"},{"name":"microphthalmia or coloboma with or without rhizomelic skeletal dysplasia","type":"related"},{"name":"microphthalmia, syndromic 14","type":"related"},{"name":"microphthalmia, syndromic type 14","type":"exact"},{"name":"microphthalmia-coloboma-rhizomelic skeletal dysplasia","type":"exact"},{"name":"microphthalmia/coloboma and skeletal dysplasia syndrome","type":"related"}],"termid":"MONDO:0014380","xrefs":{"Monarch":{"xref_id":"0014380"}}}


id: PBO:0074463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 5 (pseudogene)","termid":"PBO:0074463"}


id: PBO:0082298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aromatic aminotransferase I; expression is regulated by general control of amino acid biosynthesis; involved with Aro9p in production of kynurenic acid to detoxify excess tryptophan","termid":"PBO:0082298"}


id: GO:0047556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxyphthalate + H+ = 3,4-dihydroxybenzoate + CO2.","definition_xrefs":["RHEA:18601","EC:4.1.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3,4-dihydroxyphthalate decarboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r1447","KEGG_REACTION:R01634","MetaCyc:34-DIHYDROXYPHTHALATE-DECARBOXYLASE-RXN","GO:0034913"],"synonyms":[{"name":"3,4-dihydroxyphthalate 2-decarboxylase activity","type":"exact"},{"name":"3,4-dihydroxyphthalate carboxy-lyase (3,4-dihydroxybenzoate-forming)","type":"related"},{"name":"3,4-dihydroxyphthalate carboxy-lyase activity","type":"related"}],"termid":"GO:0047556"}


id: MONDO:0012695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the RPGRIP1L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 5","secondary_identifiers":["OMIM:611561","MEDGEN:409740","UMLS:C1969052","GARD:15520","DOID:0070119","MESH:C566915"],"synonyms":[{"name":"MKS5","type":"exact"},{"name":"Meckel syndrome 5","type":"related"},{"name":"Meckel syndrome caused by mutation in RPGRIP1L","type":"exact"},{"name":"Meckel syndrome, type 5","type":"exact"},{"name":"Meckel-Gruber syndrome, type 5","type":"exact"},{"name":"RPGRIP1L Meckel syndrome","type":"exact"}],"termid":"MONDO:0012695","xrefs":{"Monarch":{"xref_id":"0012695"}}}


id: GO:0072318
data:
  {"annotated_genes":["SJAG_05296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89809],"is_not":false,"summary":null,"term":"GO:0072318"}]},"cv_name":"biological_process","definition":"The disaggregation of a clathrin coat into its constituent components; results in stripping or removing the clathrin coat from clathrin-coated vesicles (CCV) before fusing with their targets. CVVs transport cargo from plasma membrane and trans-Golgi to the endosomal system.","definition_xrefs":["PMID:11146663","PMID:11084334","PMID:8524399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle uncoating","termid":"GO:0072319"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"clathrin coat disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin-coat disassembly","type":"exact"},{"name":"clathrin-coat uncoating","type":"exact"},{"name":"clathrin-coated vesicle uncoating","type":"exact"}],"termid":"GO:0072318","terms_by_termid":{"GO:0072318":null}}


id: MONDO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vulva adenocarcinoma (obsolete MONDO:0002208)","termid":"MONDO:0002208","xrefs":{"Monarch":{"xref_id":"0002208"}}}


id: PBO:0084750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial manganese superoxide dismutase; protects cells against oxygen toxicity and oxidative stress; human mitochondrial SOD2 can complement a yeast null mutant and human cytoplasmic SOD1 can also complement when targeted to the mitochondrial matrix","termid":"PBO:0084750"}


id: GO:0021651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 1 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:jid","GOC:cls","GOC:curators","GOC:dgh","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 1 development","termid":"GO:0021567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 1 morphogenesis","termid":"GO:0021651"}


id: GO:0009100
data:
  {"annotated_genes":["SJAG_01006","SJAG_04053","SJAG_01972","SJAG_01276","SJAG_02648","SJAG_02519","SJAG_02163","SJAG_01021","SJAG_04231","SJAG_04952","SJAG_01069","SJAG_04571","SJAG_00554","SJAG_01950","SJAG_05219","SJAG_04728","SJAG_02783","SJAG_04090","SJAG_02996","SJAG_02056","SJAG_00598","SJAG_04316","SJAG_04401","SJAG_00816","SJAG_02102","SJAG_04363","SJAG_01491","SJAG_03535","SJAG_03188","SJAG_03056","SJAG_02903","SJAG_03149","SJAG_03082","SJAG_00394","SJAG_03555","SJAG_04770","SJAG_03280","SJAG_03330","SJAG_03311","SJAG_00747","SJAG_04906","SJAG_04821","SJAG_00437","SJAG_00831","SJAG_00183","SJAG_03656","SJAG_03032","SJAG_04127","SJAG_00334","SJAG_04954","SJAG_03790","SJAG_01858","SJAG_03150","SJAG_03333","SJAG_01264","SJAG_01389","SJAG_04095","SJAG_01595","SJAG_05348","SJAG_03774","SJAG_03764","SJAG_03676","SJAG_00924","SJAG_03871"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100255,104534,105430,103992,97385,104419,108477,117811,87021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"},{"annotations":[90636,97847,99486,116182,61218,112000,97897,110536,98185,103056,108749,101788,104471,89886,93400,99283],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[93048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"},{"annotations":[87022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009101"},{"annotations":[117952,86896,113203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006491"},{"annotations":[63186,95926,107480,103260,95211,99521,115528,107850,117264,97279,105233,113204,113398],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006486"},{"annotations":[98273,92656,100256,99144,100834,102205,104535,110157,103993,102273,110358,92658,98275,87023,112142,117484,105431,117812,108478,88717,92657,110163,98274,98424,98266,62702,92655,98276],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006487"},{"annotations":[98278,87024,98259,92659,98257,98280,99487,92660,104420,117485,92661,100843,102057,97386,92662,116289,110537,98277,98279,94827,98256,99823,108750,98258],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0018279"},{"annotations":[103566,98267,117486,110158,102206,100257,103994,117813,110164],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006493"},{"annotations":[101032,92540,105432],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035269"},{"annotations":[93049,95212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01858":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03280":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03535":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoprotein metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycoprotein metabolism","type":"exact"}],"termid":"GO:0009100","terms_by_termid":{"GO:0000032":null,"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006491":null,"GO:0006493":null,"GO:0009101":null,"GO:0018279":null,"GO:0035269":null,"GO:0097466":null,"GO:1904380":null}}


id: GO:0036234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of glucuronic acid from a conjugated substrate.","definition_xrefs":["PMID:22294686","GOC:BHF","GOC:vk","PMID:8560473"],"gene_count":0,"genotype_count":0,"name":"obsolete deglucuronidation (obsolete GO:0036234)","termid":"GO:0036234"}


id: RO:0002235
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite-of relationship in which the host is a plant and the parasite that attaches to the host stem (PO:0009047)","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem_parasite_of","termid":"RO:0002235"}


id: MONDO:0011141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megaloblastic anemia-immunodeficiency due to folate transporter 1 deficiency","termid":"MONDO:0971066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"megaloblastic anemia, folate-responsive","secondary_identifiers":["OMIM:601775","UMLS:C2749656","MEDGEN:440842"],"synonyms":[{"name":"MEGAF","type":"exact"},{"name":"folate level in erythrocytes","type":"exact"}],"termid":"MONDO:0011141","xrefs":{"Monarch":{"xref_id":"0011141"}}}


id: MONDO:0004432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign teratoma that arises from the pericardium.","definition_xrefs":["NCIT:C6744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature teratoma","termid":"MONDO:0003517"},{"relation_name":"is_a","term_name":"neoplasm of pericardium","termid":"MONDO:0021381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"mature pericardial teratoma","secondary_identifiers":["MEDGEN:233673","DOID:8012","UMLS:C1334638"],"synonyms":[{"name":"benign pericardial teratoma","type":"exact"},{"name":"mature pericardial teratoma","type":"exact"},{"name":"mature teratoma of pericardium","type":"exact"},{"name":"mature teratoma of the pericardium","type":"exact"},{"name":"pericardium mature teratoma","type":"exact"}],"termid":"MONDO:0004432","xrefs":{"Monarch":{"xref_id":"0004432"}}}


id: GO:0072559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of three components, NLRP3 (NALP3), PYCARD and caspase-1. It is activated upon exposure to whole pathogens, as well as a number of structurally diverse pathogen- and danger-associated molecular patterns (PAMPs and DAMPs) and environmental irritants. Whole pathogens demonstrated to activate the NLRP3 inflammasome complex include the fungi Candida albicans and Saccharomyces cerevisiae, bacteria that produce pore-forming toxins, including Listeria monocytogenes and Staphylococcus aureus, and viruses such as Sendai virus, adenovirus, and influenza virus.","definition_xrefs":["GOC:add","PMID:20303873","GOC:BHF","GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"NLRP3 inflammasome complex","synonyms":[{"name":"NALP3 inflammasome complex","type":"exact"}],"termid":"GO:0072559"}


id: PBO:0003692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf7","termid":"PBO:0003692"}


id: GO:0010480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a microsporocyte cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. A microsporocyte is a diploid (2n) cell that undergoes meiosis and forms four haploid (1n) microspores; also called microspore mother cell and, in seed plants, pollen mother cell.","definition_xrefs":["CL:0000248","PMID:16751349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"sporocyte differentiation","termid":"GO:0048533"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microsporocyte differentiation","synonyms":[{"name":"pollen mother cell differentiation","type":"related"}],"termid":"GO:0010480"}


id: PBO:0001282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein","termid":"PBO:0001282"}


id: PBO:0057445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 563","termid":"PBO:0057445"}


id: FYECO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiosulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiosulfate","secondary_identifiers":["PMID:7565608"],"synonyms":[{"name":"+ S2O32-","type":"exact"}],"termid":"FYECO:0000284"}


id: MONDO:0002468
data:
  {"annotated_genes":["SJAG_02528"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011971"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B cell deficiency","termid":"MONDO:0002211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hyperimmunoglobulin syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:272730","NCIT:C27579","UMLS:C1334069","DOID:2959"],"synonyms":[{"name":"hyperimmunoglobulin syndrome","type":"exact"}],"termid":"MONDO:0002468","terms_by_termid":{"MONDO:0011971":null},"xrefs":{"Monarch":{"xref_id":"0002468"}}}


id: PBO:0055136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2555","termid":"PBO:0055136"}


id: MONDO:0019024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare entity characterized by localized but destructive growth of a tumor consisting of highly atypical, immature mast cells.(WHO, 2001)","definition_xrefs":["NCIT:C9348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"mastocytosis","termid":"MONDO:0007950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"mast cell sarcoma","secondary_identifiers":["MEDGEN:11322","MESH:D012515","ICDO:9740/3","ONCOTREE:MCSL","Orphanet:66661","SCTID:118615008","UMLS:C0036221","DOID:355","EFO:1000364","icd11.foundation:1993363632","icd11.foundation:233404891","ICD9:202.6","GARD:18870"],"synonyms":[{"name":"MCS","type":"exact"},{"name":"MCSL","type":"related"},{"name":"mast cell sarcoma","type":"exact"},{"name":"mast-cell sarcoma","type":"exact"},{"name":"sarcoma of mast cell","type":"exact"}],"termid":"MONDO:0019024","xrefs":{"Monarch":{"xref_id":"0019024"}}}


id: PBO:0040116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 3","termid":"PBO:0040116"}


id: PBO:0071612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 30","termid":"PBO:0071612"}


id: MONDO:0054666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 5","secondary_identifiers":["MEDGEN:1627972","OMIM:617690","UMLS:C4540141","DOID:0080497"],"synonyms":[{"name":"ODG5","type":"related"},{"name":"ovarian dysgenesis 5","type":"exact"}],"termid":"MONDO:0054666","xrefs":{"Monarch":{"xref_id":"0054666"}}}


id: GO:1905952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid localization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17564681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid localization","synonyms":[{"name":"regulation of lipid localisation","type":"exact"}],"termid":"GO:1905952"}


id: PBO:0062841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 7","termid":"PBO:0062841"}


id: GO:0030262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Alterations undergone by nuclei at the molecular and morphological level as part of the execution phase of apoptosis.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly involved in execution phase of apoptosis","termid":"GO:0006921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic nuclear changes","synonyms":[{"name":"apoptotic nuclear change","type":"narrow"}],"termid":"GO:0030262"}


id: PBO:0088751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family ubiquinone biosynthesis ATPase Coq8","termid":"PBO:0088751"}


id: PR:Q9Y7Y7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Y7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.03","synonyms":[{"name":"Spom972h-gas4","type":"exact"}],"termid":"PR:Q9Y7Y7"}


id: MONDO:0005286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the hard palate, soft palate, or uvula.","definition_xrefs":["NCIT:C4402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"oral cavity neoplasm","termid":"MONDO:0021245"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palatal neoplasm","secondary_identifiers":["EFO:0003849","MESH:D010157","SCTID:126805009","MEDGEN:14576","UMLS:C0030215"],"synonyms":[{"name":"neoplasm of palate","type":"exact"},{"name":"neoplasm of secondary palate","type":"exact"},{"name":"neoplasm of the palate","type":"exact"},{"name":"palate neoplasm","type":"exact"},{"name":"palate tumor","type":"exact"},{"name":"palate tumour","type":"exact"},{"name":"secondary palate neoplasm","type":"exact"},{"name":"secondary palate neoplasm (disease)","type":"exact"},{"name":"secondary palate tumor","type":"exact"},{"name":"secondary palate tumour","type":"exact"},{"name":"tumor of palate","type":"exact"},{"name":"tumor of secondary palate","type":"exact"},{"name":"tumor of the palate","type":"exact"},{"name":"tumour of palate","type":"exact"},{"name":"tumour of secondary palate","type":"exact"},{"name":"tumour of the palate","type":"exact"}],"termid":"MONDO:0005286","xrefs":{"Monarch":{"xref_id":"0005286"}}}


id: PBO:0056876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence F (pseudogene)","termid":"PBO:0056876"}


id: PBO:0043768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX17 pseudogene 1","termid":"PBO:0043768"}


id: GO:0070109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-27-mediated signaling pathway","termid":"GO:0070107"},{"relation_name":"positively_regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"positive regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070109"}


id: PBO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dad1","termid":"PBO:0001876"}


id: GO:0140038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 crotonylated at lysine 27.","definition_xrefs":["PMID:27105114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0060090","GO:0140566","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"histone H3K27cr reader activity","synonyms":[{"name":"H3K27cr modified histone binding","type":"narrow"}],"termid":"GO:0140038"}


id: GO:0046713
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"},{"annotations":[57215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035445"}]},"cv_name":"biological_process","definition":"The directed movement of borate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Borate is the anion (BO3)3-; boron is a group 13 element, with properties which are borderline between metals and non-metals.","definition_xrefs":["PMID:21710975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"borate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"boron transport","type":"related"}],"termid":"GO:0046713","terms_by_termid":{"GO:0035445":null,"GO:0140159":null}}


id: MONDO:1012086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetragametic chimerism, non-human animal","termid":"MONDO:1011918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, sheep","secondary_identifiers":["OMIA:000393-9940"],"termid":"MONDO:1012086","xrefs":{"Monarch":{"xref_id":"1012086"}}}


id: PR:O74971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An autophagy protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13040:SF2","PRO:DNx","OMA:SCHPO03703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.10c","secondary_identifiers":["UniProtKB:O74971"],"synonyms":[{"name":"Spom972h-ATG5","type":"exact"},{"name":"meiotically up-regulated gene 77 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74971"}


id: PBO:0111921
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3H1 type","termid":"PBO:0111921"}


id: FYPO:0002129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to heat","synonyms":[{"name":"increased protein phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during cellular response to heat shock","type":"narrow"}],"termid":"FYPO:0002129"}


id: FYPO:0005902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is decreased. Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["PomBase:mah","GO:0030048","PMID:19570908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based movement","termid":"FYPO:0005900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of actin filament-based movement","synonyms":[{"name":"decreased rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin filament-based movement during vegetative growth","type":"exact"},{"name":"reduced rate of actin filament-based movement","type":"exact"}],"termid":"FYPO:0005902"}


id: PBO:0044866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2A","termid":"PBO:0044866"}


id: MONDO:0017038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease in childhood and adulthood associated with a systemic vasculitis (obsolete MONDO:0017038)","secondary_identifiers":["Orphanet:264973"],"synonyms":[{"name":"secondary ILD in childhood and adulthood associated with a systemic vasculitis","type":"exact"}],"termid":"MONDO:0017038","xrefs":{"Monarch":{"xref_id":"0017038"}}}


id: PBO:0068802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 39, pseudogene","termid":"PBO:0068802"}


id: PBO:0034670
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thick_stable_microtubule_bundle","termid":"PBO:0034670"}


id: MONDO:0968944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 82","secondary_identifiers":["OMIM:620779","DOID:0060947"],"termid":"MONDO:0968944","xrefs":{"Monarch":{"xref_id":"0968944"}}}


id: MOD:01948
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and two L-serine residues by a thioether bond and a carbon-carbon bond to form labionin.","definition_xrefs":["RESID:AA0594","PubMed:20082397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"labionin","synonyms":[{"name":"(2S,4S)-2,4-diamino-2-[([(2R)-2-amino-2-carboxyethyl]sulfanyl)methyl]pentanedioic acid","type":"exact"},{"name":"(2S,4S,8R)-2,4,8-triamino-4-carboxy-6-thianonanedioic acid","type":"exact"},{"name":"(2S,4S,8R)-labionin","type":"exact"},{"name":"labionin","type":"exact"}],"termid":"MOD:01948"}


id: GO:2000856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mineralocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of corticosteroid hormone secretion","termid":"GO:2000847"},{"relation_name":"is_a","term_name":"regulation of mineralocorticoid secretion","termid":"GO:2000855"},{"relation_name":"negatively_regulates","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of mineralocorticoid secretion","termid":"GO:2000856"}


id: GO:1902365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["PMID:21131906","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to spindle pole body","synonyms":[{"name":"activation of protein localisation to spindle pole body","type":"narrow"},{"name":"activation of protein localization to spindle pole body","type":"narrow"},{"name":"positive regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up regulation of protein localization to spindle pole body","type":"exact"},{"name":"up-regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up-regulation of protein localization to spindle pole body","type":"exact"},{"name":"upregulation of protein localisation to spindle pole body","type":"exact"},{"name":"upregulation of protein localization to spindle pole body","type":"exact"}],"termid":"GO:1902365"}


id: PBO:0028076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_unseparated_DNA","termid":"PBO:0028076"}


id: PBO:0089158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7-like Rlp7 involved in ribosome biogenesis","termid":"PBO:0089158"}


id: GO:0003057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"chemical cardiac inotropy","type":"exact"},{"name":"regulation of the force of heart muscle contraction by chemical signal","type":"related"}],"termid":"GO:0003057"}


id: GO:0030104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of water within an organism or cell.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete water homeostasis (obsolete GO:0030104)","secondary_identifiers":["Wikipedia:Osmoregulation"],"synonyms":[{"name":"osmoregulation","type":"related"},{"name":"regulation of osmotic pressure","type":"exact"}],"termid":"GO:0030104"}


id: MONDO:0006950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the retinal vasculature with various causes including infectious disease; lupus erythematosus, systemic; multiple sclerosis; behcet syndrome; and chorioretinitis.","definition_xrefs":["MESH:D031300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"retinitis","termid":"MONDO:0002708"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal vasculitis","secondary_identifiers":["SCTID:77628002","icd11.foundation:1863208483","EFO:1001156","MEDGEN:57503","MedDRA:10038905","UMLS:C0152026","ICD9:362.18","DOID:11563"],"synonyms":[{"name":"retinal vasculitis","type":"exact"}],"termid":"MONDO:0006950","xrefs":{"Monarch":{"xref_id":"0006950"}}}


id: GO:0019632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving shikimate, (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate, the anion of shikimic acid. It is an important intermediate in the biosynthesis of aromatic amino acids.","definition_xrefs":["ISBN:0198547684","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"shikimate metabolic process","synonyms":[{"name":"shikimate metabolism","type":"exact"}],"termid":"GO:0019632"}


id: FYPO:0007335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at centromere inner repeat regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"},{"relation_name":"is_a","term_name":"abolished chromatin silencing","termid":"FYPO:0007333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished chromatin silencing at centromere inner repeat","synonyms":[{"name":"abolished chromatin silencing at centromere imr","type":"exact"},{"name":"abolished chromatin silencing at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abolished chromatin silencing at centromeric inner repeat region","type":"exact"},{"name":"abolished heterochromatin silencing at centromere inner repeat","type":"exact"},{"name":"chromatin silencing at centromere inner repeatabolished","type":"exact"}],"termid":"FYPO:0007335"}


id: PBO:0060687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-deacetylase and N-sulfotransferase 2","termid":"PBO:0060687"}


id: GO:0030119
data:
  {"annotated_genes":["SJAG_04931","SJAG_00104","SJAG_02453","SJAG_00108","SJAG_03726","SJAG_01809","SJAG_04609","SJAG_04565","SJAG_00800","SJAG_01167","SJAG_00379","SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100616,112439,118315,112224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030121"},{"annotations":[95767,107790,111041,111100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030122"},{"annotations":[88417,110943,93690,95631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030123"},{"annotations":[110946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030131"}]},"cv_name":"cellular_component","definition":"Any of several heterotetrameric complexes that link clathrin (or another coat-forming molecule, as hypothesized for AP-3 and AP-4) to a membrane surface; they are found on coated pits and coated vesicles, and mediate sorting of cargo proteins into vesicles. Each AP complex contains two large (a beta and one of either an alpha, gamma, delta, or epsilon) subunits (110-130 kDa), a medium (mu) subunit (approximately 50 kDa), and a small (sigma) subunit (15-20 kDa).","definition_xrefs":["GOC:mah","PMID:15473838","PMID:10611976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"membrane coat","termid":"GO:0030117"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_03726":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"AP-type membrane coat adaptor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin adaptor","type":"related"}],"termid":"GO:0030119","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030123":null,"GO:0030131":null}}


id: GO:0005012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Neu/ErbB-2 receptor activity (obsolete GO:0005012)","synonyms":[{"name":"Neu/ErbB-2 receptor activity","type":"exact"}],"termid":"GO:0005012"}


id: GO:0048649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals, having the potential to develop any of several distinct developmental paths, have their individual developmental fate determined in response to genetic cues. Individuals with distinct developmental fates perform different functions in a colony of social insects.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caste determination","termid":"GO:0048648"},{"relation_name":"is_a","term_name":"polyphenic determination, influence by genetic factors","termid":"GO:0048652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caste determination, influence by genetic factors","termid":"GO:0048649"}


id: GO:0008774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde + CoA + NAD+ = acetyl-CoA + NADH + H+.","definition_xrefs":["EC:1.2.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acetaldehyde dehydrogenase (acetylating) activity","secondary_identifiers":["MetaCyc:ACETALD-DEHYDROG-RXN","RHEA:23288"],"synonyms":[{"name":"ADA","type":"related"},{"name":"DmpF","type":"related"},{"name":"acetaldehyde:NAD+ oxidoreductase (CoA-acetylating)","type":"related"},{"name":"acylating acetaldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde dehydrogenase (acylating) activity","type":"related"}],"termid":"GO:0008774"}


id: PBO:0054453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1850","termid":"PBO:0054453"}


id: PBO:0042003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 57","termid":"PBO:0042003"}


id: GO:0033727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + H2O + acceptor = a carboxylate + reduced acceptor.","definition_xrefs":["EC:1.2.99.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aldehyde dehydrogenase (FAD-independent) activity","secondary_identifiers":["MetaCyc:1.2.99.7-RXN"],"synonyms":[{"name":"AORDd","type":"related"},{"name":"Mop","type":"related"},{"name":"aldehyde oxidoreductase activity","type":"related"},{"name":"aldehyde:acceptor oxidoreductase (FAD-independent) activity","type":"related"}],"termid":"GO:0033727"}


id: MONDO:0016072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of anomaly of puberty or/and menstrual cycle that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete anomaly of puberty or/and menstrual cycle of genetic origin (obsolete MONDO:0016072)","secondary_identifiers":["Orphanet:202940"],"synonyms":[{"name":"genetic anomaly of puberty or/and menstrual cycle","type":"exact"}],"termid":"MONDO:0016072","xrefs":{"Monarch":{"xref_id":"0016072"}}}


id: PBO:0050468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA transcript antisense RNA, myeloid-specific 1","termid":"PBO:0050468"}


id: FYPO:0002224
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the meiotic cell cycle is arrested under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"},{"relation_name":"is_a","term_name":"abnormally arrested cell cycle progression","termid":"FYPO:0000407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormally arrested meiotic cell cycle","termid":"FYPO:0002224"}


id: GO:0018846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: styrene oxide = phenylacetaldehyde.","definition_xrefs":["EC:5.3.99.7","RHEA:21604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"styrene-oxide isomerase activity","secondary_identifiers":["KEGG_REACTION:R02615","UM-BBD_reactionID:r0034","MetaCyc:STYRENE-OXIDE-ISOMERASE-RXN"],"synonyms":[{"name":"SOI activity","type":"related"},{"name":"styrene oxide isomerase activity","type":"exact"},{"name":"styrene-oxide isomerase (epoxide-cleaving)","type":"related"}],"termid":"GO:0018846"}


id: GO:0051355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events contributing to equilibrioception by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception plays an important role in the ability of an organism to perceive its orientation with respect to gravity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proprioception","termid":"GO:0019230"},{"relation_name":"part_of","term_name":"equilibrioception","termid":"GO:0050957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proprioception involved in equilibrioception","synonyms":[{"name":"equilibrioception by proprioception","type":"exact"},{"name":"perception of orientation with respect to gravity by proprioception","type":"exact"},{"name":"proprioception during equilibrioception","type":"related"}],"termid":"GO:0051355"}


id: FYPO:0008273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H4 binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type). The affected gene product may be encoded by the mutated gene, or by a different gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone binding","termid":"FYPO:0008271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000702"],"is_obsolete":false,"name":"normal histone H4 binding","termid":"FYPO:0008273"}


id: PBO:0039962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 5","termid":"PBO:0039962"}


id: MONDO:0100253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic syndrome with an autosomal recessive pattern of inheritance. It is caused by a mutation in the ESCO2 gene. Clinical signs at birth include multiple limb and facial abnormalities.","definition_xrefs":["PMID:18411254","NCIT:C4681"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete Mendelian syndromes with cleft lip/palate (obsolete MONDO:0015335)","termid":"MONDO:0015335"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with limb reduction defects (obsolete MONDO:0017432)","termid":"MONDO:0017432"},{"relation_name":"excluded_subClassOf","term_name":"obsolete dysostosis of genetic origin with limb anomaly as a major feature (obsolete MONDO:0018455)","termid":"MONDO:0018455"},{"relation_name":"excluded_subClassOf","term_name":"obsolete musculoskeletal disease with cataract (obsolete MONDO:0020232)","termid":"MONDO:0020232"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Roberts-SC phocomelia syndrome","secondary_identifiers":["MESH:C535687","OMIM:269000","OMIM:268300","MEDGEN:95931","GARD:7387","DOID:0050536","DOID:5325","SCTID:48718006","Orphanet:3103","UMLS:C0392475"],"synonyms":[{"name":"Appelt-Gerken-Lenz syndrome","type":"exact"},{"name":"ESCO2 spectrum disorder","type":"exact"},{"name":"RBS","type":"exact"},{"name":"Roberts syndrome","type":"exact"},{"name":"Roberts syndrome/SC phocomelia","type":"exact"},{"name":"Roberts tetraphocomelia syndrome","type":"exact"},{"name":"Roberts-SC phocomelia syndrome","type":"exact"},{"name":"SC phocomelia","type":"narrow"},{"name":"SC phocomelia syndrome","type":"exact"},{"name":"SC phocomelia syndrome (mild variant of Roberts syndrome)","type":"narrow"},{"name":"SC pseudothalidomide syndrome","type":"narrow"},{"name":"hypomelia hypotrichosis facial hemangioma syndrome","type":"exact"},{"name":"long bone deficiencies associated with cleft lip-palate","type":"exact"},{"name":"phocomelia-pseudothalidomide syndrome","type":"exact"},{"name":"pseudothalidomide syndrome","type":"exact"},{"name":"tetraphocomelia-cleft palate syndrome","type":"exact"}],"termid":"MONDO:0100253","xrefs":{"Monarch":{"xref_id":"0100253"}}}


id: GO:0002010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the molecular signal from the arterial baroreceptors is relayed to the vasomotor center causing it to signal increase arterial pressure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"excitation of vasomotor center by baroreceptor signaling","synonyms":[{"name":"excitation of vasomotor center by baroreceptor signalling","type":"exact"}],"termid":"GO:0002010"}


id: GO:0008267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polyglutamine tract, i.e. a series of consecutive glutamine residues, in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"poly-glutamine tract binding","termid":"GO:0008267"}


id: MONDO:0018422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 70 is a very rare, complex subtype of hereditary spastic paraplegia that presents in infancy with delayed motor development (i.e. crawling, walking) and is characterized by lower limb spasticity, increased deep tendon reflexes, extensor plantar responses, impaired vibratory sensation at ankles, amyotrophy and borderline intellectual disability. Additional signs may include gait disturbances, Achilles tendon contractures, scoliosis and cerebellar abnormalities.","definition_xrefs":["Orphanet:401835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 70","secondary_identifiers":["GARD:21700","MEDGEN:1655287","UMLS:C4749431"],"synonyms":[{"name":"SPG70","type":"exact"}],"termid":"MONDO:0018422","xrefs":{"Monarch":{"xref_id":"0018422"}}}


id: PBO:0076137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLA2 pseudogene 2","termid":"PBO:0076137"}


id: PBO:0090487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are2","termid":"PBO:0090487"}


id: PBO:0088550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MIM complex subunit Mim1","termid":"PBO:0088550"}


id: FYPO:0003917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules that contain nonsense mutations is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA catabolic process during vegetative growth","termid":"FYPO:0002137"},{"relation_name":"is_a","term_name":"abnormal nonsense-mediated decay","termid":"FYPO:0003916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased nonsense-mediated decay","synonyms":[{"name":"decreased NMD","type":"exact"},{"name":"decreased nonsense-mediated decay during mitotic cell cycle","type":"related"},{"name":"decreased nonsense-mediated decay during vegetative growth","type":"exact"},{"name":"decreased nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","type":"exact"},{"name":"reduced nonsense-mediated decay","type":"exact"}],"termid":"FYPO:0003917"}


id: SO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region found within the modular centromere.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:centromeric_repeat","type":"exact"},{"name":"centromeric repeat","type":"exact"}],"termid":"SO:0001797"}


id: PBO:0083463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene LCB4","termid":"PBO:0083463"}


id: PBO:0032759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA element modulatory factor homolog Tmf1 (predicted)","termid":"PBO:0032759"}


id: GO:0004846
data:
  {"annotated_genes":["SJAG_04299"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113513],"is_not":false,"summary":null,"term":"GO:0004846"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: urate + O2 + H2O = 5-hydroxyisourate + hydrogen peroxide.","definition_xrefs":["EC:1.7.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","termid":"GO:0016663"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04299":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"urate oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:URATE-OXIDASE-RXN","UM-BBD_reactionID:r1322","RHEA:21368"],"synonyms":[{"name":"urate:oxygen oxidoreductase activity","type":"related"},{"name":"uric acid oxidase activity","type":"related"},{"name":"uricase II activity","type":"narrow"},{"name":"uricase activity","type":"related"}],"termid":"GO:0004846","terms_by_termid":{"GO:0004846":null}}


id: SO:1000013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of a thymine to a cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_transition","termid":"SO:1000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_to_C_transition","synonyms":[{"name":"T to C transition","type":"exact"}],"termid":"SO:1000013"}


id: GO:0033142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear progesterone receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nuclear progesterone receptor binding","synonyms":[{"name":"progesterone receptor binding","type":"broad"}],"termid":"GO:0033142"}


id: MONDO:1011838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital copper deficiency, non-human animal","secondary_identifiers":["OMIA:000226"],"termid":"MONDO:1011838","xrefs":{"Monarch":{"xref_id":"1011838"}}}


id: MONDO:0958123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal origin of the pulmonary artery","termid":"MONDO:0015239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated pulmonary artery sling","secondary_identifiers":["Orphanet:658574"],"termid":"MONDO:0958123","xrefs":{"Monarch":{"xref_id":"0958123"}}}


id: MONDO:0018563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"adactyly of foot","secondary_identifiers":["Orphanet:435623","MEDGEN:539387","SCTID:66345008","UMLS:C0265641"],"synonyms":[{"name":"congenital absence of toes","type":"exact"}],"termid":"MONDO:0018563","xrefs":{"Monarch":{"xref_id":"0018563"}}}


id: PBO:0031147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_galactomannan_level","termid":"PBO:0031147"}


id: GO:1901229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:1901229)","synonyms":[{"name":"regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"regulation of non-canonical Wnt-activated signaling pathway via JNK cascade","type":"exact"}],"termid":"GO:1901229"}


id: PBO:0078903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 12-1","termid":"PBO:0078903"}


id: GO:0015828
data:
  {"annotated_genes":["SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63055],"is_not":false,"summary":null,"term":"GO:0015828"},{"annotations":[103324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"}]},"cv_name":"biological_process","definition":"The directed movement of tyrosine, 2-amino-3-(4-hydroxyphenyl)propanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tyrosine transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"L-tyrosine transport","type":"narrow"}],"termid":"GO:0015828","terms_by_termid":{"GO:0015828":null,"GO:0090514":null}}


id: PBO:0055717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase maturation factor 2","termid":"PBO:0055717"}


id: GO:1902552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of catalase activity.","definition_xrefs":["GOC:TermGenie","PMID:24285797"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of catalase activity (obsolete GO:1902552)","synonyms":[{"name":"down regulation of CAT","type":"related"},{"name":"down regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"down regulation of caperase activity","type":"exact"},{"name":"down regulation of catalase activity","type":"exact"},{"name":"down regulation of catalase reaction","type":"exact"},{"name":"down regulation of catalase-peroxidase activity","type":"exact"},{"name":"down regulation of equilase activity","type":"exact"},{"name":"down regulation of haem catalase activity","type":"narrow"},{"name":"down regulation of heme catalase activity","type":"narrow"},{"name":"down regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"down regulation of manganese catalase activity","type":"narrow"},{"name":"down regulation of optidase activity","type":"exact"},{"name":"down-regulation of CAT","type":"related"},{"name":"down-regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"down-regulation of caperase activity","type":"exact"},{"name":"down-regulation of catalase activity","type":"exact"},{"name":"down-regulation of catalase reaction","type":"exact"},{"name":"down-regulation of catalase-peroxidase activity","type":"exact"},{"name":"down-regulation of equilase activity","type":"exact"},{"name":"down-regulation of haem catalase activity","type":"narrow"},{"name":"down-regulation of heme catalase activity","type":"narrow"},{"name":"down-regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"down-regulation of manganese catalase activity","type":"narrow"},{"name":"down-regulation of optidase activity","type":"exact"},{"name":"downregulation of CAT","type":"related"},{"name":"downregulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"downregulation of caperase activity","type":"exact"},{"name":"downregulation of catalase activity","type":"exact"},{"name":"downregulation of catalase reaction","type":"exact"},{"name":"downregulation of catalase-peroxidase activity","type":"exact"},{"name":"downregulation of equilase activity","type":"exact"},{"name":"downregulation of haem catalase activity","type":"narrow"},{"name":"downregulation of heme catalase activity","type":"narrow"},{"name":"downregulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"downregulation of manganese catalase activity","type":"narrow"},{"name":"downregulation of optidase activity","type":"exact"},{"name":"inhibition of CAT","type":"related"},{"name":"inhibition of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"inhibition of caperase activity","type":"narrow"},{"name":"inhibition of catalase activity","type":"narrow"},{"name":"inhibition of catalase reaction","type":"narrow"},{"name":"inhibition of catalase-peroxidase activity","type":"narrow"},{"name":"inhibition of equilase activity","type":"narrow"},{"name":"inhibition of haem catalase activity","type":"narrow"},{"name":"inhibition of heme catalase activity","type":"narrow"},{"name":"inhibition of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"narrow"},{"name":"inhibition of manganese catalase activity","type":"narrow"},{"name":"inhibition of optidase activity","type":"narrow"},{"name":"negative regulation of CAT","type":"related"},{"name":"negative regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"negative regulation of caperase activity","type":"exact"},{"name":"negative regulation of catalase reaction","type":"exact"},{"name":"negative regulation of catalase-peroxidase activity","type":"exact"},{"name":"negative regulation of equilase activity","type":"exact"},{"name":"negative regulation of haem catalase activity","type":"narrow"},{"name":"negative regulation of heme catalase activity","type":"narrow"},{"name":"negative regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"negative regulation of manganese catalase activity","type":"narrow"},{"name":"negative regulation of optidase activity","type":"exact"}],"termid":"GO:1902552"}


id: PBO:0079447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB like protein 4","termid":"PBO:0079447"}


id: MONDO:0018283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary qualitative or quantitative defects of alpha-dystroglycan (obsolete MONDO:0018283)","secondary_identifiers":["Orphanet:371040"],"synonyms":[{"name":"primary alpha-dystroglycanopathy","type":"exact"},{"name":"primary dystroglycanopathy","type":"exact"}],"termid":"MONDO:0018283","xrefs":{"Monarch":{"xref_id":"0018283"}}}


id: MONDO:0002560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete junctional epidermolysis bullosa (obsolete MONDO:0002560)","termid":"MONDO:0002560","xrefs":{"Monarch":{"xref_id":"0002560"}}}


id: GO:0035163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell derived from the embryonic head mesoderm acquires the specialized features of a mature hemocyte. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["PMID:14602069","GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemocyte differentiation","termid":"GO:0042386"},{"relation_name":"part_of","term_name":"embryonic hemopoiesis","termid":"GO:0035162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic hemocyte differentiation","synonyms":[{"name":"embryonic arthropod blood cell differentiation","type":"exact"},{"name":"embryonic hemocyte cell differentiation","type":"exact"}],"termid":"GO:0035163"}


id: PBO:0069255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 510, pseudogene","termid":"PBO:0069255"}


id: PBO:0061192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U receptor 2","termid":"PBO:0061192"}


id: FYPO:0005893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein found associated with chromatin is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level in chromatin","synonyms":[{"name":"increased protein level at chromatin during vegetative growth","type":"exact"},{"name":"increased protein level in chromatin during mitotic cell cycle","type":"related"},{"name":"increased protein level in chromatin during vegetative growth","type":"exact"},{"name":"protein accumulation in chromatin","type":"exact"}],"termid":"FYPO:0005893"}


id: MONDO:1011314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorder of glycosylation that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of glycosylation, non-human animal","termid":"MONDO:1011314","xrefs":{"Monarch":{"xref_id":"1011314"}}}


id: GO:1901638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any copper ion import that takes place in ascospore-type prospore.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion import into ascospore-type prospore (obsolete GO:1901638)","synonyms":[{"name":"copper ion import into ascospore-type prospore","type":"exact"},{"name":"copper ion uptake in ascospore-type prospore","type":"exact"}],"termid":"GO:1901638"}


id: GO:0033641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to pH (obsolete GO:0033641)","termid":"GO:0033641"}


id: GO:0018530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-6-hydroxynicotine + H2O + O2 = 6-hydroxypseudooxynicotine + H2O2.","definition_xrefs":["RHEA:10012","EC:1.5.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(R)-6-hydroxynicotine oxidase activity","secondary_identifiers":["KEGG_REACTION:R07170","MetaCyc:R-6-HYDROXYNICOTINE-OXIDASE-RXN","UM-BBD_reactionID:r0477"],"synonyms":[{"name":"(R)-6-hydroxynicotine:oxygen oxidoreductase activity","type":"related"},{"name":"6-hydroxy-D-nicotine oxidase activity","type":"exact"},{"name":"D-6-hydroxynicotine oxidase activity","type":"related"}],"termid":"GO:0018530"}


id: PBO:0050389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 13","termid":"PBO:0050389"}


id: PBO:0063113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase 1","termid":"PBO:0063113"}


id: GO:0061790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a dense core granule membrane to the plasma membrane.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:26575293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"part_of","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0140056","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"dense core granule docking","termid":"GO:0061790"}


id: FYPO:0007140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that has a greater length, diameter, volume, and length:diameter ratio than normal, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen elongated vegetative cell","termid":"FYPO:0002251"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, swollen cell","termid":"FYPO:0002490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, swollen, elongated cell","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, swollen, elongated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, swollen, elongated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, swollen, elongated cell","type":"exact"}],"termid":"FYPO:0007140"}


id: PBO:0004908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific protein Spo2","termid":"PBO:0004908"}


id: PBO:0048219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric cancer associated transcript 3","termid":"PBO:0048219"}


id: GO:0015746
data:
  {"annotated_genes":["SJAG_01872","SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111711,91289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006843"}]},"cv_name":"biological_process","definition":"The directed movement of citrate, 2-hydroxy-1,2,3-propanetricarboyxlate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid transport","termid":"GO:0006842"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"citrate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015746","terms_by_termid":{"GO:0006843":null}}


id: MONDO:0016639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lower limb malformation-hypospadias syndrome is a rare developmental defect during embryogenesis characterized by severe, uni- or bilateral lower limb malformations (incl. tibial hypoplasia, split and rocker bottom-shaped feet, and oligosyndactyly), normal upper limbs and hypospadias. Additional dysmorphic features (e.g. short neck and low-set, large ears), atrial septal defect, ureteropelvic junction stenosis and slight septation of the spleen, have also been reported. There have been no further descriptions in the literature since 1977.","definition_xrefs":["Orphanet:2487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower limb deficiency-hypospadias syndrome","secondary_identifiers":["GARD:18773","UMLS:C2930962","MESH:C535640","MEDGEN:418952"],"synonyms":[{"name":"Fried-Goldberg-Mundel syndrome","type":"exact"},{"name":"lower limb malformation-hypospadias syndrome","type":"related"}],"termid":"MONDO:0016639","xrefs":{"Monarch":{"xref_id":"0016639"}}}


id: PBO:0027462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_error-prone_translesion_synthesis","termid":"PBO:0027462"}


id: MONDO:0009299
data:
  {"annotated_genes":["SJAG_03051","SJAG_04950","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[85926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"}]},"cv_name":"mondo","definition":"46,XX gonadal dysgenesis (46,XX GD) is a primary ovarian defect leading to premature ovarian failure (POF) in otherwise normal 46,XX females as a result of failure of the gonads to develop or due to resistance to gonadotrophin stimulation.","definition_xrefs":["Orphanet:243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03051":null,"SJAG_04148":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"46 XX gonadal dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1742528605","OMIMPS:233300","MEDGEN:146899","NANDO:2200384","NCIT:C120197","SCTID:95198001","UMLS:C0685837","DOID:14450","MESH:D023961","GARD:5671"],"synonyms":[{"name":"46,XX complete gonadal dysgenesis","type":"exact"},{"name":"46,XX gonadal dysgenesis","type":"exact"},{"name":"46,XX ovarian dysgenesis","type":"exact"},{"name":"46,XX pure gonadal dysgenesis","type":"exact"},{"name":"FSH-RO","type":"exact"},{"name":"XX female gonadal dysgenesis","type":"exact"},{"name":"XX gonadal dysgenesis","type":"related"},{"name":"XX-GD","type":"exact"},{"name":"follicular stimulating hormone-resistant ovaries","type":"exact"},{"name":"hypergonadotropic ovarian dysgenesis","type":"exact"},{"name":"ovarian dysgenesis","type":"related"}],"termid":"MONDO:0009299","terms_by_termid":{"MONDO:0013689":null,"MONDO:0030736":null,"MONDO:0054850":null},"xrefs":{"Monarch":{"xref_id":"0009299"}}}


id: GO:0031466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul5 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cul5-RING ubiquitin ligase complex","synonyms":[{"name":"CDL5 complex","type":"exact"},{"name":"CRL5 complex","type":"exact"},{"name":"EC2S complex","type":"broad"},{"name":"SCF5 complex","type":"related"},{"name":"cullin-RING ligase 5","type":"exact"}],"termid":"GO:0031466"}


id: MONDO:0015728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"15q overgrowth syndrome","termid":"MONDO:0017806"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 15q","secondary_identifiers":["NORD:942","GARD:18740","UMLS:C2931705","MEDGEN:419879","MESH:C538036","Orphanet:1707"],"synonyms":[{"name":"Chromosome 15, Distal Trisomy 15q","type":"exact"},{"name":"distal duplication 15q","type":"exact"},{"name":"distal trisomy type 15q","type":"exact"},{"name":"telomeric duplication 15q","type":"exact"},{"name":"trisomy 15qter","type":"exact"}],"termid":"MONDO:0015728","xrefs":{"Monarch":{"xref_id":"0015728"}}}


id: PBO:0025487
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase deficiency","termid":"PBO:0025487"}


id: PBO:0040868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bcl2 modifying factor","termid":"PBO:0040868"}


id: MONDO:0019766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Renpenning syndrome","termid":"MONDO:0010653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Porteous type","secondary_identifiers":["MEDGEN:1842708","Orphanet:93945","GARD:19239","UMLS:C5681616"],"termid":"MONDO:0019766","xrefs":{"Monarch":{"xref_id":"0019766"}}}


id: MONDO:0019949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-actinopathy","termid":"MONDO:0100084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"zebra body myopathy","secondary_identifiers":["ICD9:359.89","SCTID:34513009","GARD:19354","MEDGEN:543080","icd11.foundation:1699813614","Orphanet:97240","UMLS:C0270969"],"termid":"MONDO:0019949","xrefs":{"Monarch":{"xref_id":"0019949"}}}


id: GO:2000268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation, intrinsic pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"is_a","term_name":"regulation of blood coagulation, intrinsic pathway","termid":"GO:2000266"},{"relation_name":"positively_regulates","term_name":"blood coagulation, intrinsic pathway","termid":"GO:0007597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood coagulation, intrinsic pathway","termid":"GO:2000268"}


id: GO:0008853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete exodeoxyribonuclease III activity (obsolete GO:0008853)","termid":"GO:0008853"}


id: PBO:0043172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLOCK interacting pacemaker","termid":"PBO:0043172"}


id: PBO:0042629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 4 pseudogene","termid":"PBO:0042629"}


id: MOD:00844
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms of or groups containing (18)O.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope labeled residue","termid":"MOD:00702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled residue","termid":"MOD:00844"}


id: PBO:0054901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2315","termid":"PBO:0054901"}


id: MONDO:0006806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the pars plana.","definition_xrefs":["NCIT:C35110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveitis","termid":"MONDO:0020283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"intermediate uveitis","secondary_identifiers":["MEDGEN:22596","DOID:12732","UMLS:C0042166","MESH:D015867","GARD:21065","Orphanet:279914","SCTID:314429009","MedDRA:10022557","EFO:1000986","HP:0012124"],"synonyms":[{"name":"IU","type":"exact"},{"name":"chronic cyclitis","type":"exact"},{"name":"intermediate uveitis","type":"exact"},{"name":"intermediate uveitis (disease)","type":"exact"},{"name":"pars planitis","type":"narrow"},{"name":"peripheral uveoretinitis","type":"exact"}],"termid":"MONDO:0006806","xrefs":{"Monarch":{"xref_id":"0006806"}}}


id: GO:0061539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of octopamine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"octopamine secretion","termid":"GO:0061539"}


id: PBO:0043349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colipase like 2","termid":"PBO:0043349"}


id: PBO:0080573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing planar cell polarity effector","termid":"PBO:0080573"}


id: PBO:0057266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 491","termid":"PBO:0057266"}


id: MONDO:0000643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the vulva. Representative examples include cellular angiofibroma, melanocytic nevus, nodular hidradenoma, and Bartholin gland adenoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign female reproductive system neoplasm","termid":"MONDO:0000624"},{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar benign neoplasm","secondary_identifiers":["SCTID:92486005","DOID:0060109","MEDGEN:102301","UMLS:C0154003","NCIT:C3611"],"synonyms":[{"name":"benign neoplasm of the vulva","type":"exact"},{"name":"benign neoplasm of vulva","type":"exact"},{"name":"benign tumor of the vulva","type":"exact"},{"name":"benign tumor of vulva","type":"exact"},{"name":"benign tumour of the vulva","type":"exact"},{"name":"benign tumour of vulva","type":"exact"},{"name":"benign vulva neoplasm","type":"exact"},{"name":"benign vulva tumor","type":"exact"},{"name":"benign vulva tumour","type":"exact"},{"name":"benign vulval neoplasm","type":"exact"},{"name":"benign vulvar neoplasm","type":"exact"},{"name":"benign vulvar tumor","type":"exact"},{"name":"benign vulvar tumour","type":"exact"},{"name":"mammalian vulva benign neoplasm","type":"exact"},{"name":"vulva benign neoplasm","type":"exact"}],"termid":"MONDO:0000643","xrefs":{"Monarch":{"xref_id":"0000643"}}}


id: GO:0047526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: vestitone + NADP+ = 2'-hydroxyformononetin + NADPH + H+.","definition_xrefs":["RHEA:22560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2'-hydroxyisoflavone reductase activity","secondary_identifiers":["MetaCyc:RXN-3562","EC:1.3.1.45"],"synonyms":[{"name":"2',7-dihydroxy-4',5'-methylenedioxyisoflavone reductase activity","type":"related"},{"name":"NADPH:2'-hydroxyisoflavone oxidoreductase activity","type":"related"},{"name":"isoflavone reductase activity","type":"related"},{"name":"vestitone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047526"}


id: PBO:0051020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGFBP5 antisense RNA 1","termid":"PBO:0051020"}


id: GO:1902062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of betaine aldehyde.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23563483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"betaine aldehyde metabolic process","termid":"GO:1902061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"betaine aldehyde catabolic process","synonyms":[{"name":"betaine aldehyde breakdown","type":"exact"},{"name":"betaine aldehyde catabolism","type":"exact"},{"name":"betaine aldehyde degradation","type":"exact"}],"termid":"GO:1902062"}


id: GO:0052747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: sinapaldehyde + NADPH + H+ = sinapyl-alcohol + NADP+.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sinapyl alcohol dehydrogenase activity (obsolete GO:0052747)","synonyms":[{"name":"sinapyl-alcohol dehydrogenase activity","type":"related"},{"name":"sinapyl-alcohol:NADP+ oxidoreductase activity","type":"exact"}],"termid":"GO:0052747"}


id: FYPO:0006342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more microtubules occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal microtubule binding","termid":"FYPO:0001943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"decreased microtubule binding","synonyms":[{"name":"reduced microtubule binding","type":"exact"}],"termid":"FYPO:0006342"}


id: GO:0019594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"mannitol metabolic process","synonyms":[{"name":"mannitol metabolism","type":"exact"}],"termid":"GO:0019594"}


id: GO:0031776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a melanin-concentrating hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"melanin-concentrating hormone receptor binding","synonyms":[{"name":"melanin-concentrating hormone receptor ligand","type":"narrow"}],"termid":"GO:0031776"}


id: PBO:0004959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family C26 protein","termid":"PBO:0004959"}


id: PBO:0081667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 587 pseudogene 1","termid":"PBO:0081667"}


id: GO:2000086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal to epithelial transition involved in mesonephros morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:2000084"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"positive regulation of mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:2000086"}


id: PBO:0068590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 41, pseudogene","termid":"PBO:0068590"}


id: PBO:0042187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B3 pseudogene 1","termid":"PBO:0042187"}


id: PBO:0073109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 16C member 5","termid":"PBO:0073109"}


id: MONDO:0002547
data:
  {"annotated_genes":["SJAG_01111","SJAG_04213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86838,86839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm arising from the perineural cells in the sheaths surrounding the nerves. Representative examples include neurofibroma, schwannoma, and malignant peripheral nerve sheath tumor.","definition_xrefs":["NCIT:C4972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"},{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"nerve sheath neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:64639","MESH:D018317","UMLS:C0206727","DOID:3193","ONCOTREE:NST"],"synonyms":[{"name":"neoplasm of nerve sheath","type":"exact"},{"name":"neoplasm of the nerve sheath","type":"exact"},{"name":"nerve sheath neoplasm","type":"exact"},{"name":"nerve sheath tumor","type":"exact"},{"name":"nerve sheath tumour","type":"exact"},{"name":"peripheral nerve sheath neoplasm","type":"exact"},{"name":"tumor of nerve sheath","type":"exact"},{"name":"tumour of nerve sheath","type":"exact"}],"termid":"MONDO:0002547","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0002547"}}}


id: GO:0110079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of placenta blood vessel development.","definition_xrefs":["GOC:BHF","PMID:27748453","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"placenta blood vessel development","termid":"GO:0060674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of placenta blood vessel development","termid":"GO:0110079"}


id: PBO:0034564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_molecular_function","termid":"PBO:0034564"}


id: MONDO:1011817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal sac gland carcinoma, non-human animal","secondary_identifiers":["OMIA:001500"],"termid":"MONDO:1011817","xrefs":{"Monarch":{"xref_id":"1011817"}}}


id: GO:0003188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a heart valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"heart valve morphogenesis","termid":"GO:0003179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve formation","termid":"GO:0003188"}


id: GO:1905582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mannose stimulus.","definition_xrefs":["GO_REF:0000071","PMID:16699509","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mannose","termid":"GO:1905582"}


id: MONDO:0001227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of tympanitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic otitis media","termid":"MONDO:0021204"},{"relation_name":"is_a","term_name":"tympanitis","termid":"MONDO:0024616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic tympanitis","secondary_identifiers":["MEDGEN:583089","SCTID:89723004","DOID:11217","ICD9:384.1","UMLS:C0395849"],"synonyms":[{"name":"tympanitis, chronic","type":"exact"}],"termid":"MONDO:0001227","xrefs":{"Monarch":{"xref_id":"0001227"}}}


id: GO:1904387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-phenylalanine derivative stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:12112407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to L-phenylalanine derivative","termid":"GO:1904386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-phenylalanine derivative","termid":"GO:1904387"}


id: PBO:0040546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-glucuronyltransferase 3 pseudogene 1","termid":"PBO:0040546"}


id: MONDO:0054581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Townes-Brocks syndrome","termid":"MONDO:0007142"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Townes-Brocks syndrome 1","secondary_identifiers":["MEDGEN:1635275","OMIM:107480","UMLS:C4551481"],"synonyms":[{"name":"TBS1","type":"related"},{"name":"Townes-Brocks syndrome 1","type":"exact"},{"name":"Townes-Brocks-branchiootorenal-like syndrome","type":"related"},{"name":"anus, imperforate, with hand, Foot, and Ear anomalies","type":"related"},{"name":"deafness, sensorineural, with imperforate anus and thumb anomalies","type":"related"},{"name":"rear syndrome","type":"related"},{"name":"renal-ear-anal-radial syndrome","type":"related"},{"name":"townes-brocks branchiootorenal-like syndrome","type":"exact"}],"termid":"MONDO:0054581","xrefs":{"Monarch":{"xref_id":"0054581"}}}


id: PBO:0054030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1361","termid":"PBO:0054030"}


id: PBO:0110352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4-CDC7 kinase regulatory subunit","termid":"PBO:0110352"}


id: MONDO:0010999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fallot complex - intellectual deficit - growth delay is a rare disorder characterized by tetralogy of Fallot, minor facial anomalies, and severe intellectual deficiency and growth delay.","definition_xrefs":["Orphanet:3304"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallot complex-intellectual disability-growth delay syndrome","secondary_identifiers":["MESH:C536608","OMIM:601127","SCTID:723336008","UMLS:C1832735","GARD:893","MEDGEN:322025"],"synonyms":[{"name":"Bindewald Ulmer Muller syndrome","type":"related"},{"name":"Bindewald-Ulmer-Müller syndrome","type":"exact"},{"name":"FALLOT complex with severe mental and growth retardation","type":"related"}],"termid":"MONDO:0010999","xrefs":{"Monarch":{"xref_id":"0010999"}}}


id: MOD:00856
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to an L-alaninium (protonated L-alanine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-alanine (L-alaninium) residue","termid":"MOD:00856"}


id: PR:Q10441
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12B10.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ile)-lysidine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.08c","synonyms":[{"name":"Spom972h-SPAC12B10.08c","type":"exact"},{"name":"tRNA(Ile)-2-lysyl-cytidine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(Ile)-lysidine synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10441"}


id: PBO:0038691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 2","termid":"PBO:0038691"}


id: PBO:0002275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase beta subunit Fas1","termid":"PBO:0002275"}


id: PBO:0052043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kalirin RhoGEF kinase","termid":"PBO:0052043"}


id: PBO:0087314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small subunit of the clathrin-associated adaptor complex AP-2; AP-2 is involved in protein sorting at the plasma membrane; related to the sigma subunit of the mammalian plasma membrane clathrin-associated protein (AP-2) complex","termid":"PBO:0087314"}


id: MONDO:1010538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megacolon that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megacolon, non-human animal","termid":"MONDO:1010039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megacolon, cattle","secondary_identifiers":["OMIA:000629-9913"],"termid":"MONDO:1010538","xrefs":{"Monarch":{"xref_id":"1010538"}}}


id: PBO:0054222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1603","termid":"PBO:0054222"}


id: MONDO:0043789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Delayed-type hypersensitivity reaction to foreign proteins derived from an animal serum. It occurs approximately six to twenty one days following the administration of the foreign antigen. Symptoms include fever, arthralgias, myalgias, skin eruptions, lymphadenopathy, chest pain, and dyspnea. Certain drugs (e.g., antibiotics, anticancer agents, and anti-inflammatory medications) and infectious disorders (e.g., hepatitis B) may also cause serum sickness-like reaction.","definition_xrefs":["NCIT:C79718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type IV hypersensitivity disease","termid":"MONDO:0002459"},{"relation_name":"is_a","term_name":"type III hypersensitivity disease","termid":"MONDO:0007004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"serum sickness","secondary_identifiers":["SCTID:72284000","icd11.foundation:715261250","MESH:D012713","UMLS:C0036830","MEDGEN:11390"],"synonyms":[{"name":"Sicknesses, serum","type":"related"},{"name":"intoxication by serum","type":"related"},{"name":"protein sickness","type":"related"},{"name":"serum Sicknesses","type":"related"},{"name":"serum reaction","type":"related"},{"name":"serum sickness","type":"exact"},{"name":"sickness, serum","type":"related"},{"name":"transfusion reaction due to serum protein reaction","type":"exact"}],"termid":"MONDO:0043789","xrefs":{"Monarch":{"xref_id":"0043789"}}}


id: GO:0075705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell that begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicles containing the virus. The vesicle then delivers its viral content to early endosomes, and the process ends when the viral nucleic acid is released into the host cytoplasm by its injection through the endosome membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane (obsolete GO:0075705)","synonyms":[{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane","type":"exact"},{"name":"viral penetration via endocytosis followed by genetic injection through the endosome membrane","type":"exact"}],"termid":"GO:0075705"}


id: FYPO:0002366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methylation during vegetative growth","termid":"FYPO:0000870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4me during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 methylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002366"}


id: PBO:0048526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 2 pseudogene 1","termid":"PBO:0048526"}


id: PBO:0040432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase copper transporting beta pseudogene 1","termid":"PBO:0040432"}


id: PBO:0031461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_conjugation_frequency","termid":"PBO:0031461"}


id: GO:0034479
data:
  {"annotated_genes":["SJAG_02161"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97268],"is_not":false,"summary":null,"term":"GO:0034479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylglycerol + H2O = 1,2-diacylglycerol + glycerol 3-phosphate.","definition_xrefs":["GOC:mah","PMID:18434318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034479","terms_by_termid":{"GO:0034479":null}}


id: PBO:0001184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Pom34","termid":"PBO:0001184"}


id: FYPO:0006117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid and has two or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"septated spheroid vegetative cell","termid":"FYPO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000005","FYPO:0000002","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"multiseptate spheroid vegetative cell","synonyms":[{"name":"multiseptate rounded vegetative cell","type":"exact"}],"termid":"FYPO:0006117"}


id: MONDO:0014388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial median cleft of the upper and lower lips is a rare and isolated orofacial defect characterized by incomplete median clefts of both the lower lip (limited to the vermilion, with no muscle involvement) and upper lip (with muscle involvement), double labial frenulum and fusion of the upper gingival and upper labial mucosa (resulting in a shallow upper vestibular fold), in addition to poor dental alignment, and increased interdental distance between the lower and upper median incisors. Variable expressivity has been reported in an affected family.","definition_xrefs":["Orphanet:401942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial median cleft of the upper and lower lips","secondary_identifiers":["DOID:0080407","OMIM:615892","MEDGEN:863033","UMLS:C4014596","GARD:17663"],"synonyms":[{"name":"OFC14","type":"related"},{"name":"orofacial cleft 14","type":"related"}],"termid":"MONDO:0014388","xrefs":{"Monarch":{"xref_id":"0014388"}}}


id: GO:0015234
data:
  {"annotated_genes":["SJAG_00835","SJAG_03652","SJAG_02962","SJAG_04673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89664,89665],"is_not":false,"summary":null,"term":"GO:0015234"},{"annotations":[100170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[103124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"}]},"cv_name":"molecular_function","definition":"Enables the transfer of thiamine from one side of a membrane to the other. Thiamine is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"thiamine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015402","Reactome:R-HSA-199626","GO:0015403"],"synonyms":[{"name":"thiamin permease activity","type":"exact"},{"name":"thiamin transmembrane transporter activity","type":"exact"},{"name":"thiamin uptake transporter activity","type":"related"},{"name":"thiamine permease activity","type":"exact"},{"name":"thiamine uptake transmembrane transporter activity","type":"related"},{"name":"vitamin B1 transporter activity","type":"exact"}],"termid":"GO:0015234","terms_by_termid":{"GO:0015234":null,"GO:0034216":null,"GO:0090422":null}}


id: PBO:0038383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hemiparasite_of","termid":"PBO:0038383"}


id: FYPO:0006865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to streptonigrin. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0000631"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin","synonyms":[{"name":"normal DNA damage checkpoint during cellular response to streptonigrin during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation during cellular response to streptonigrin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to rufocromomycin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin during vegetative growth","type":"exact"}],"termid":"FYPO:0006865"}


id: FYPO:0006891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal inositol hexakisphosphate kinase activity","termid":"FYPO:0006891"}


id: GO:0016057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Hyperpolarization (vertebrates) or depolarization (invertebrates) of the photoreceptor cell membrane via closing/opening of cation specific channels as a result of signals generated by rhodopsin activation by a photon.","definition_xrefs":["GOC:dph","GOC:hb","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane potential in photoreceptor cell","synonyms":[{"name":"changes in polarization state of photoreceptor cell membrane","type":"exact"}],"termid":"GO:0016057"}


id: PBO:0044870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2D","termid":"PBO:0044870"}


id: MONDO:0022723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia","secondary_identifiers":["SCTID:205465004","MEDGEN:91012","UMLS:C0343284"],"synonyms":[{"name":"chondrodysplasia","type":"exact"}],"termid":"MONDO:0022723","xrefs":{"Monarch":{"xref_id":"0022723"}}}


id: GO:0019025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A single stranded RNA genome with the same nucleotide polarity as mRNA.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete positive sense viral genome (obsolete GO:0019025)","termid":"GO:0019025"}


id: PBO:0081683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 605","termid":"PBO:0081683"}


id: FYPO:0003535
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118999],"is_not":false,"summary":null,"term":"FYPO:0003535"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the bipolar index is lower than normal. The bipolar index is the proportion of the population undergoing bipolar growth at any given time.","definition_xrefs":["PomBase:mah","PMID:20501954","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":1,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased bipolar index","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta"],"synonyms":[{"name":"decreased frequency of bipolar growth polarity","type":"related"},{"name":"decreased number of cells undergoing bipolar growth","type":"exact"},{"name":"reduced bipolar index","type":"exact"}],"termid":"FYPO:0003535","terms_by_termid":{"FYECO:0000162":null,"FYPO:0003535":null}}


id: PBO:0051233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-31-1 (pseudogene)","termid":"PBO:0051233"}


id: PBO:0047780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D2","termid":"PBO:0047780"}


id: PBO:0030214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_nutrient","termid":"PBO:0030214"}


id: PBO:0049244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GrpE like 1, mitochondrial","termid":"PBO:0049244"}


id: GO:0035901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lack of contact with other members of the same species.","definition_xrefs":["PMID:20203532","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"response to isolation stress","termid":"GO:0035900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to isolation stress","synonyms":[{"name":"cellular response to social isolation","type":"exact"}],"termid":"GO:0035901"}


id: MONDO:1012229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive spinal myelopathy, non-human animal","termid":"MONDO:1011858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive spinal myelopathy, cattle","secondary_identifiers":["OMIA:000832-9913"],"termid":"MONDO:1012229","xrefs":{"Monarch":{"xref_id":"1012229"}}}


id: PBO:0090572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (AGC family) Gad8","termid":"PBO:0090572"}


id: PBO:0075758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine repetitive matrix 1","termid":"PBO:0075758"}


id: GO:0044527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a peptidyl-cystine residue in a protein by the direct addition of H2S, followed by the removal of 2 protons to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jl","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete formation of peptidyl-cystine persulfide by sulphur transfer from H2S (obsolete GO:0044527)","termid":"GO:0044527"}


id: PBO:0083452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CTI6/YPL181W","termid":"PBO:0083452"}


id: FYPO:0008084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the endoplasmic reticulum is abolished during nitrogen starvation.","definition_xrefs":["PMID:37191320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal reticulophagy","termid":"FYPO:0008083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished reticulophagy during nitrogen starvation","termid":"FYPO:0008084"}


id: GO:0052874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + NAD+ = FMN + NADH + 2 H+.","definition_xrefs":["RHEA:21620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"FMN reductase (NADH) activity","secondary_identifiers":["EC:1.5.1.42","KEGG_REACTION:R05705"],"synonyms":[{"name":"NADH dehydrogenase (FMN) activity","type":"exact"},{"name":"NADH-FMN reductase activity","type":"related"},{"name":"NADH-dependent FMN reductase activity","type":"related"}],"termid":"GO:0052874"}


id: MONDO:0011168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus in which the cause of the disease is a mutation in the IL2RA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 10","secondary_identifiers":["UMLS:C1866040","OMIM:601942","DOID:0110749","MEDGEN:400903","MESH:C566602"],"synonyms":[{"name":"IDDM10","type":"exact"},{"name":"IL2RA type 1 diabetes mellitus","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 10","type":"related"},{"name":"diabetes mellitus, insulin-dependent, type 10","type":"exact"},{"name":"diabetes, mellitus, insulin-dependent, susceptibility to, 10","type":"related"},{"name":"insulin-dependent diabetes mellitus 10","type":"exact"},{"name":"type 1 diabetes mellitus caused by mutation in IL2RA","type":"exact"}],"termid":"MONDO:0011168","xrefs":{"Monarch":{"xref_id":"0011168"}}}


id: SO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of three nucleotide bases in tRNA which recognizes a codon in mRNA.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"},{"relation_name":"part_of","term_name":"anticodon_loop","termid":"SO:0001173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anticodon","secondary_identifiers":["http://en.wikipedia.org/wiki/Anticodon"],"synonyms":[{"name":"anti-codon","type":"exact"}],"termid":"SO:0001174"}


id: PBO:0027034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_mitotic_spindle_midzone","termid":"PBO:0027034"}


id: PBO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2539","termid":"PBO:0055120"}


id: GO:1901510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-microperfuranone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(-)-microperfuranone metabolic process","synonyms":[{"name":"(-)-microperfuranone metabolism","type":"exact"}],"termid":"GO:1901510"}


id: PBO:0060244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC binding protein","termid":"PBO:0060244"}


id: GO:0044289
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Sites of close apposition of the inner and outer mitochondrial membrane.","definition_xrefs":["PMID:22009199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial inner-outer membrane contact site","secondary_identifiers":["GO:0044285"],"synonyms":[{"name":"bridge contact site","type":"related"},{"name":"contact site","type":"broad"}],"termid":"GO:0044289"}


id: PBO:0069700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 979, pseudogene","termid":"PBO:0069700"}


id: MONDO:0003342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign mesenchymal neoplasm arising from the perivascular cells of the connective and soft tissues. It is characterized by the presence of pericytes that grow in a circumferential pattern around vessels.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"},{"relation_name":"is_a","term_name":"pericytic neoplasm","termid":"MONDO:0002604"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign perivascular tumor","secondary_identifiers":["UMLS:C1332532","MEDGEN:231437","DOID:5238","NCIT:C6529"],"synonyms":[{"name":"benign Pericytic neoplasm","type":"exact"},{"name":"benign Pericytic tumor","type":"exact"},{"name":"benign Pericytic tumour","type":"exact"},{"name":"benign pericytic neoplasm","type":"exact"},{"name":"benign perivascular neoplasm","type":"exact"},{"name":"benign perivascular tumor","type":"exact"},{"name":"pericytic neoplasm, benign","type":"exact"}],"termid":"MONDO:0003342","xrefs":{"Monarch":{"xref_id":"0003342"}}}


id: PBO:0028430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyridoxine_import","termid":"PBO:0028430"}


id: GO:1905232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-glutamate(1-) stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:25962137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to L-glutamate","termid":"GO:1902065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-glutamate","synonyms":[{"name":"cellular response to L-glutamate(1-)","type":"related"}],"termid":"GO:1905232"}


id: PATO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000803 tactile response value (obsolete PATO:0000803)","termid":"PATO:0000803"}


id: PBO:0050462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hook microtubule tethering protein 3","termid":"PBO:0050462"}


id: MONDO:0016779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disease characterized by polyhydramnios (mostly due to placentomegaly), fetal macrosomia, abdominal wall defects, skeletal abnormalities (including bell-shaped thorax, coat-hanger appearance of the ribs and decreased mid to wide thorax diameter ratio in infancy), feeding difficulties and impaired swallowing, dysmorphic features (hairy forehead, full cheeks, protruding philtrum, micrognathia), developmental delay and intellectual disability. Additional features may include kyphoskoliosis, joint contractures, diastasis recti, muscular hypotonia. There is increased risk of hepatoblastoma.","definition_xrefs":["Orphanet:254519"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"multiple congenital anomalies due to 14q32.2 imprinting defect","termid":"MONDO:0100499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple congenital anomalies due to 14q32.2 maternally expressed gene defect","secondary_identifiers":["GARD:17219","DOID:0111712","MEDGEN:1830421","UMLS:C5779872"],"synonyms":[{"name":"Kagami-Ogata syndrome","type":"exact"},{"name":"MCA due to 14q32.2 maternally expressed gene defect","type":"exact"}],"termid":"MONDO:0016779","xrefs":{"Monarch":{"xref_id":"0016779"}}}


id: PBO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.13.19","termid":"PBO:0002058"}


id: GO:0097476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a spinal cord motor neuron from one site to another. A spinal cord motor neuron is a motor neuron that passes from the spinal cord toward or to a muscle and conducts an impulse that causes movement.","definition_xrefs":["GOC:yaf","CL:0011001","PMID:20711475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor neuron migration","termid":"GO:0097475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord motor neuron migration","termid":"GO:0097476"}


id: GO:0001615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete thyrotropin releasing hormone and secretagogue-like receptors activity (obsolete GO:0001615)","synonyms":[{"name":"thyrotropin releasing hormone and secretagogue-like receptors activity","type":"exact"}],"termid":"GO:0001615"}


id: GO:0032091
data:
  {"annotated_genes":["SJAG_03088","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94792,104620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein binding.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"},{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein binding","type":"exact"},{"name":"down-regulation of protein binding","type":"exact"},{"name":"downregulation of protein binding","type":"exact"},{"name":"inhibition of protein binding","type":"narrow"}],"termid":"GO:0032091","terms_by_termid":{"GO:1904530":null}}


id: GO:0018657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: toluene + 1/2 O2 = 3-hydroxytoluene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete toluene 3-monooxygenase activity (obsolete GO:0018657)","termid":"GO:0018657"}


id: MONDO:0016907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 8q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the long arm (q) of chromosome 8. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 8q deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 8","termid":"MONDO:0016873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 8","secondary_identifiers":["MESH:C537828","icd11.foundation:653068448","UMLS:C0795828","Orphanet:262065","GARD:3770","MEDGEN:208638"],"synonyms":[{"name":"8q deletion","type":"related"},{"name":"8q monosomy","type":"related"},{"name":"chromosome 8q deletion","type":"related"},{"name":"deletion 8q","type":"related"},{"name":"monosomy 8q","type":"related"},{"name":"partial deletion of chromosome 8q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 8","type":"exact"},{"name":"partial monosomy 8q","type":"related"},{"name":"partial monosomy of chromosome 8q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 8","type":"exact"}],"termid":"MONDO:0016907","xrefs":{"Monarch":{"xref_id":"0016907"}}}


id: PBO:0035902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_dimethylation_at_double-strand_break_site_during_vegetative_growth","termid":"PBO:0035902"}


id: PBO:0067124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 169, pseudogene","termid":"PBO:0067124"}


id: PBO:0076046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 1 pseudogene 1","termid":"PBO:0076046"}


id: PBO:0029081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_spindle_pole_body","termid":"PBO:0029081"}


id: GO:0030287
data:
  {"annotated_genes":["SJAG_04067","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109894,109895,112771,112772],"is_not":false,"summary":null,"term":"GO:0030287"}]},"cv_name":"cellular_component","definition":"The region between the plasma membrane and the cell wall in organisms lacking an outer cell membrane such as yeast and Gram positive bacteria. The region is thinner than the equivalent in Gram negative bacteria.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periplasmic space","termid":"GO:0042597"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell wall-bounded periplasmic space","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IWZ","type":"narrow"},{"name":"cell wall bounded periplasmic space","type":"exact"},{"name":"cell wall-enclosed periplasmic space","type":"exact"},{"name":"inner wall zone","type":"narrow"}],"termid":"GO:0030287","terms_by_termid":{"GO:0030287":null}}


id: MONDO:0020634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant meningioma with aggressive clinical course. It recurs in approximately 50-78% of the cases. This category includes the anaplastic (malignant) meningioma, papillary meningioma, and rhabdoid meningioma.","definition_xrefs":["NCIT:C38938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grade III meningioma","secondary_identifiers":["UMLS:C0280801","MEDGEN:79186"],"synonyms":[{"name":"WHO grade III meningioma","type":"exact"},{"name":"grade 3 meningioma","type":"exact"},{"name":"grade III meningioma","type":"exact"},{"name":"meningioma, malignant","type":"exact"}],"termid":"MONDO:0020634","xrefs":{"Monarch":{"xref_id":"0020634"}}}


id: GO:0007214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to its receptor on the surface of a target cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"gamma-aminobutyric acid signaling pathway","synonyms":[{"name":"4-aminobutanoate signaling pathway","type":"exact"},{"name":"4-aminobutanoate signalling pathway","type":"exact"},{"name":"4-aminobutyrate signaling pathway","type":"exact"},{"name":"4-aminobutyrate signalling pathway","type":"exact"},{"name":"GABA signaling pathway","type":"exact"},{"name":"GABA signalling pathway","type":"exact"},{"name":"gamma-aminobutyric acid signalling pathway","type":"exact"}],"termid":"GO:0007214"}


id: GO:0140413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: zinc(out) + HCO3-(out) + HO3Se-(out) = zinc(in) + HCO3-(in) + HO3Se-(out).","definition_xrefs":["PMID:27166256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"zinc:bicarbonate symporter activity","termid":"GO:0140412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"zinc:bicarbonate:selenite symporter activity","synonyms":[{"name":"zinc:hydrogencarbonate:selenate symporter activity","type":"exact"}],"termid":"GO:0140413"}


id: FYPO:0004539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more, and shorter, cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in increased numbers","termid":"FYPO:0004538"},{"relation_name":"is_a","term_name":"short interphase microtubules","termid":"FYPO:0006103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0002399"],"is_obsolete":false,"name":"short interphase microtubules present in increased numbers","synonyms":[{"name":"broken interphase microtubules","type":"related"},{"name":"short cytoplasmic microtubules present in increased numbers during interphase of mitotic cell cycle","type":"exact"},{"name":"short cytoplasmic microtubules present in increased numbers during mitotic interphase","type":"exact"},{"name":"short fragmented interphase microtubules","type":"related"},{"name":"short interphase cytoplasmic microtubules present in increased numbers","type":"exact"},{"name":"short interphase microtubules present in greater numbers","type":"exact"},{"name":"short interphase microtubules present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004539"}


id: MONDO:0014394
data:
  {"annotated_genes":["SJAG_03254"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85921],"is_not":false,"summary":null,"term":"MONDO:0014394"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPS29 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4014641","DOID:0111889","GARD:16030","MEDGEN:863078","OMIM:615909"],"synonyms":[{"name":"DBA13","type":"related"},{"name":"Diamond-Blackfan Anaemia type 13","type":"exact"},{"name":"Diamond-Blackfan Anemia type 13","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPS29","type":"exact"},{"name":"Diamond-Blackfan anemia 13","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPS29","type":"exact"},{"name":"RPS29 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPS29 Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0014394","terms_by_termid":{"MONDO:0014394":null},"xrefs":{"Monarch":{"xref_id":"0014394"}}}


id: PATO:0001697
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"photosensitive","termid":"PATO:0000547"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased photosensitivity","synonyms":[{"name":"low photosensitivity","type":"exact"}],"termid":"PATO:0001697"}


id: GO:0018961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["UM-BBD_pathwayID:pcp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentachlorophenol metabolic process","synonyms":[{"name":"PCP metabolic process","type":"exact"},{"name":"PCP metabolism","type":"exact"},{"name":"pentachlorophenol metabolism","type":"exact"}],"termid":"GO:0018961"}


id: GO:0009403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"toxin biosynthetic process","synonyms":[{"name":"toxin anabolism","type":"exact"},{"name":"toxin biosynthesis","type":"exact"},{"name":"toxin formation","type":"exact"},{"name":"toxin synthesis","type":"exact"}],"termid":"GO:0009403"}


id: PBO:0085713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds1p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0085713"}


id: GO:0072291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to metanephric distal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in distal tubule morphogenesis","termid":"GO:0072157"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in metanephric nephron tubule morphogenesis","termid":"GO:0072290"},{"relation_name":"part_of","term_name":"metanephric distal tubule morphogenesis","termid":"GO:0072287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in metanephric distal tubule morphogenesis","termid":"GO:0072291"}


id: GO:0044579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathway resulting in the formation of butyryl-CoA, starting from acetyl-CoA.","definition_xrefs":["GOC:tt","PMID:19539744","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"butyryl-CoA biosynthetic process","termid":"GO:0044578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"}],"termid":"GO:0044579"}


id: PBO:0053761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1003","termid":"PBO:0053761"}


id: GO:1904892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor signaling via STAT.","definition_xrefs":["GOC:rjd","GOC:TermGenie","PMID:24587195","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of receptor signaling pathway via STAT","synonyms":[{"name":"regulation of STAT signalling pathway","type":"exact"},{"name":"regulation of kinase activated-STAT cascade","type":"exact"},{"name":"regulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904892"}


id: FYPO:0008023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing leucine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002060","FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"abolished cell population growth on leucine nitrogen source","synonyms":[{"name":"abolished growth on leucine nitrogen source","type":"broad"},{"name":"abolished leucine utilization","type":"related"},{"name":"abolished vegetative cell population growth on leucine nitrogen source","type":"exact"},{"name":"cell population growth on leucine nitrogen source abolished","type":"exact"}],"termid":"FYPO:0008023"}


id: MONDO:0008517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly-polydactyly-ear lobe syndrome","secondary_identifiers":["MESH:C566091","OMIM:186350","MEDGEN:348333","GARD:5090","UMLS:C1861347","Orphanet:3259"],"synonyms":[{"name":"Spel syndrome","type":"related"},{"name":"hallux syndactyly ulnar polydactyly abnormal ear lobes","type":"related"},{"name":"syndactyly-polydactyly-earlobe syndrome","type":"related"}],"termid":"MONDO:0008517","xrefs":{"Monarch":{"xref_id":"0008517"}}}


id: GO:0010283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pinoresinol + NADPH + H+ = lariciresinol + NADP+.","definition_xrefs":["PMID:10066819","PMID:7592828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pinoresinol reductase activity","termid":"GO:0010283"}


id: PBO:0065421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMB7 pseudogene 1","termid":"PBO:0065421"}


id: PBO:0001624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3c","termid":"PBO:0001624"}


id: PBO:0041642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 H","termid":"PBO:0041642"}


id: PBO:0002972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione transporter Pgt1","termid":"PBO:0002972"}


id: GO:0072426
data:
  {"annotated_genes":["SJAG_04332","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94051,101884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of G2/M transition DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to G2 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:0072426","terms_by_termid":{"GO:0072435":null}}


id: GO:0007259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell surface receptor signaling pathway in which ligand binding causes the receptor to dimerize, bringing the receptor-associated JAKs into close proximity. The JAKs then phosphorylate and activate each other on tyrosine residues.This leads to the activation of associated STAT protein, causing the STATs to dissociate from the receptor, translocate to the nucleus. The pathway ends with regulation of target gene expression by STAT proteins.","definition_xrefs":["PMID:12039028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor signaling pathway via JAK-STAT","secondary_identifiers":["Wikipedia:JAK-STAT_signaling_pathway"],"synonyms":[{"name":"JAK-STAT cascade","type":"narrow"},{"name":"JAK-STAT signal transduction","type":"exact"},{"name":"receptor signaling pathway via JAK-STAT","type":"exact"}],"termid":"GO:0007259"}


id: FYPO:0007483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic spindle pole body duplication is abnormal during the first meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle pole body duplication","termid":"FYPO:0007258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal meiotic spindle pole body duplication during meiosis I","synonyms":[{"name":"abnormal meiotic SPB duplication during meiosis I","type":"exact"},{"name":"abnormal meiotic spindle pole body duplication during first meiotic nuclear division","type":"exact"},{"name":"abnormal spindle pole body duplication during meiosis I","type":"exact"}],"termid":"FYPO:0007483"}


id: PBO:0069594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 869, pseudogene","termid":"PBO:0069594"}


id: FYPO:0001775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the eisosome filament is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abnormal protein localization to eisosome filament","termid":"FYPO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to eisosome filament","synonyms":[{"name":"abolished protein localisation to eisosome filament","type":"exact"},{"name":"abolished protein localization to eisosome filament during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to eisosome filament during vegetative growth","type":"exact"},{"name":"abolished protein localization to linear eisosome","type":"exact"},{"name":"protein localization to eisosome filament abolished","type":"exact"}],"termid":"FYPO:0001775"}


id: GO:0039716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic viral factory that is electron dense due to high levels of viral RNA. Produced by nucleo-cytoplasmic large DNA viruses (NCLDV) like Poxviridae, Asfarviridae and Iridoviridae, and dsRNA viruses like Reoviridae.","definition_xrefs":["Wikipedia:Viroplasm","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viroplasm viral factory","termid":"GO:0039716"}


id: GO:0044291
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extended zone of intimate apposition between two cells containing one or more types of intercellular junctions, e.g., the intercalated disk of muscle.","definition_xrefs":["NIF_Subcellular:sao1299635018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell-cell contact zone","synonyms":[{"name":"cell cell contact zone","type":"exact"}],"termid":"GO:0044291"}


id: MONDO:0017079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality in which the meninges protrude through a defect in the cranium.","definition_xrefs":["NCIT:C124517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningocele","termid":"MONDO:0001147"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"cephalocele","termid":"MONDO:0017078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"meningoencephalocele","secondary_identifiers":["ICD10CM:Q01.0","SCTID:52330001","ICD10CM:Q01.2","UMLS:C0266456","NANDO:2200813","GARD:20968","MEDGEN:82743","Orphanet:268820"],"synonyms":[{"name":"brain meninx cephalocele (disease)","type":"exact"},{"name":"cephalocele (disease) of brain meninx","type":"exact"},{"name":"cranial meningocele","type":"related"},{"name":"encephalomeningocele","type":"related"},{"name":"meningoencephalocele","type":"exact"}],"termid":"MONDO:0017079","xrefs":{"Monarch":{"xref_id":"0017079"}}}


id: GO:0034113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a cell of a different type via adhesion molecules.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}


id: MONDO:0011197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary thermosensitive neuropathy is a rare, demyelinating, hereditary motor and sensory neuropathy characterized by reversible episodes of ascending muscle weakness, paresthesias and areflexia triggered by a febrile episode, with or without pressure palsy.","definition_xrefs":["Orphanet:84093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy","termid":"MONDO:0015358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary thermosensitive neuropathy","secondary_identifiers":["OMIM:602107","icd11.foundation:1124144144","SCTID:715645004","UMLS:C1865856","MESH:C566575","MEDGEN:355568","GARD:16731"],"synonyms":[{"name":"neuropathy, hereditary thermosensitive","type":"related"}],"termid":"MONDO:0011197","xrefs":{"Monarch":{"xref_id":"0011197"}}}


id: PBO:0068163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 470","termid":"PBO:0068163"}


id: FYPO:0002915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which RNA splicing is abnormal. All RNA splicing may be abnormal, or one splicing of or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abnormal RNA splicing","synonyms":[{"name":"abnormal RNA splicing during mitotic cell cycle","type":"related"},{"name":"abnormal RNA splicing during vegetative growth","type":"exact"},{"name":"abnormal RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"}],"termid":"FYPO:0002915"}


id: GO:0032965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"regulates","term_name":"collagen biosynthetic process","termid":"GO:0032964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collagen biosynthetic process","synonyms":[{"name":"regulation of collagen anabolism","type":"exact"},{"name":"regulation of collagen biosynthesis","type":"exact"},{"name":"regulation of collagen formation","type":"exact"},{"name":"regulation of collagen synthesis","type":"exact"}],"termid":"GO:0032965"}


id: PR:O74884
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2402 gene.","definition_xrefs":["UniProtKB:O74884","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L24-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.14c","synonyms":[{"name":"Spom972h-rpl2402","type":"exact"}],"termid":"PR:O74884"}


id: PBO:0028859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cortical_patch_localization_during_mitosis","termid":"PBO:0028859"}


id: MONDO:0000923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathologic accumulation of air in the interstitium of the lungs, which is caused by the rupture of alveoli and terminal bronchioles, and is most often seen in premature infants that need mechanical ventilation for respiratory distress syndrome.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial emphysema","secondary_identifiers":["icd11.foundation:2008095771","NCIT:C34571","SCTID:77690003","UMLS:C1370824","ICD9:518.1","ICD10CM:J98.2","MEDGEN:234586","DOID:10030"],"synonyms":[{"name":"PIE","type":"exact"},{"name":"interstitial emphysema of lung","type":"exact"},{"name":"pie","type":"exact"},{"name":"pulmonary interstitial emphysema","type":"exact"}],"termid":"MONDO:0000923","xrefs":{"Monarch":{"xref_id":"0000923"}}}


id: PBO:0043628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit alpha","termid":"PBO:0043628"}


id: MONDO:0033046
data:
  {"annotated_genes":["SJAG_01354"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84942],"is_not":false,"summary":null,"term":"MONDO:0033046"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617564","DOID:0080255","MEDGEN:1390366","UMLS:C4479655"],"synonyms":[{"name":"MGORS8","type":"related"},{"name":"Meier-Gorlin syndrome 8","type":"exact"}],"termid":"MONDO:0033046","terms_by_termid":{"MONDO:0033046":null},"xrefs":{"Monarch":{"xref_id":"0033046"}}}


id: PBO:0039167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchor inhibitor 1","termid":"PBO:0039167"}


id: MONDO:0012933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary breast ovarian cancer syndrome in which the cause of the disease is a mutation in the BRCA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary breast ovarian cancer syndrome","termid":"MONDO:0003582"},{"relation_name":"is_a","term_name":"breast-ovarian cancer, familial, susceptibility to","termid":"MONDO:0100526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast-ovarian cancer, familial, susceptibility to, 2","secondary_identifiers":["UMLS:C2675520","MEDGEN:382625","OMIM:612555"],"synonyms":[{"name":"BRCA2 hereditary breast ovarian cancer syndrome","type":"exact"},{"name":"BROVCA2","type":"related"},{"name":"breast cancer, familial, susceptibility to, 2","type":"related"},{"name":"breast-ovarian cancer, familial, 2","type":"exact"},{"name":"breast-ovarian cancer, familial, susceptibility to, 2","type":"exact"},{"name":"breast-ovarian cancer, familial, susceptibility to, type 2","type":"exact"},{"name":"hereditary breast ovarian cancer syndrome caused by mutation in BRCA2","type":"exact"},{"name":"ovarian cancer, familial, susceptibility to, 2","type":"related"},{"name":"susceptibility to familial breast-ovarian cancer 2","type":"related"}],"termid":"MONDO:0012933","xrefs":{"Monarch":{"xref_id":"0012933"}}}


id: MONDO:0007072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"ADULT (Acro-dermo-ungual-lacrimal-tooth) syndrome is a rare ectodermal dysplasia syndrome characterized by ectrodactyly, syndactyly, mammary hypoplasia, and excessive freckling as well as other typical ectodermal defects such as hypodontia, lacrimal duct anomalies, hypotrichosis, and onychodysplasia.","definition_xrefs":["Orphanet:978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"TP63-related ectodermal dysplasia spectrum with limb and orofacial malformations","termid":"MONDO:1040001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093","MONDO:0005497"],"is_obsolete":false,"name":"ADULT syndrome","secondary_identifiers":["MEDGEN:400232","icd11.foundation:1445741645","GARD:384","MESH:C538052","OMIM:103285","UMLS:C1863204","DOID:0050601","SCTID:720464003"],"synonyms":[{"name":"ADULT syndrome","type":"exact"},{"name":"acro dermato ungual lacrimal tooth syndrome","type":"related"},{"name":"acro-dermato-ungual-lacrimal-Tooth syndrome","type":"related"},{"name":"acro-dermato-ungual-lacrimal-tooth syndrome","type":"exact"},{"name":"acrodermatounguallacrimaltooth syndrome","type":"exact"},{"name":"pigment anomaly-ectrodactyly-hypodontia syndrome","type":"exact"}],"termid":"MONDO:0007072","xrefs":{"Monarch":{"xref_id":"0007072"}}}


id: PBO:0074687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 67","termid":"PBO:0074687"}


id: PBO:0083047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxyuridine triphosphate diphosphatase (dUTPase); catalyzes hydrolysis of dUTP to dUMP and PPi, thereby preventing incorporation of uracil into DNA during replication; critical for the maintenance of genetic stability; also has diphosphatase activity on deoxyinosine triphosphate; human homolog DUT allows growth of yeast haploid dut1 null mutant after sporulation of heterozygous diploid","termid":"PBO:0083047"}


id: PBO:0000749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpb5","termid":"PBO:0000749"}


id: MONDO:0009858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pfeiffer-Palm-Teller syndrome is a very rare dysmorphic syndrome described in two sibs and characterized by a short stature, unique facies, enamel hypoplasia, progressive joint stiffness, high-pitched voice, cup-shaped ears, and narrow palpebral fissures with epicanthal folds, and intellectual deficit.","definition_xrefs":["Orphanet:2871"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pfeiffer-Palm-Teller syndrome","secondary_identifiers":["MESH:C537889","OMIM:261560","SCTID:726672000","GARD:4305","MEDGEN:342366","UMLS:C1849929"],"synonyms":[{"name":"PPT syndrome","type":"related"},{"name":"Pfeiffer Palm Teller syndrome","type":"related"},{"name":"Pfeiffer-Palm-Teller syndrome","type":"exact"},{"name":"short stature unique facies enamel hypoplasia progressive joint stiffness and high-pitched voice","type":"related"},{"name":"short stature, unique facies, enamel hypoplasia, progressive Joint stiffness, and high-pitched voice","type":"related"}],"termid":"MONDO:0009858","xrefs":{"Monarch":{"xref_id":"0009858"}}}


id: GO:0005572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcribed untranslated RNA (obsolete GO:0005572)","synonyms":[{"name":"RNA polymerase II transcribed untranslated RNA","type":"exact"}],"termid":"GO:0005572"}


id: PBO:0042042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 93","termid":"PBO:0042042"}


id: MONDO:0014327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nonepidermolytic palmoplantar keratoderma (obsolete MONDO:0006588)","termid":"MONDO:0006588"},{"relation_name":"excluded_subClassOf","term_name":"obsolete isolated focal palmoplantar keratoderma (obsolete MONDO:0017673)","termid":"MONDO:0017673"},{"relation_name":"is_a","term_name":"hereditary palmoplantar keratoderma","termid":"MONDO:0019272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma, nonepidermolytic, focal or diffuse","secondary_identifiers":["MEDGEN:816724","Orphanet:402003","OMIM:615735","GARD:17669","UMLS:C3810394","DOID:0111710"],"synonyms":[{"name":"PPKNEFD","type":"related"},{"name":"autosomal dominant focal non-epidermolytic palmoplantar keratoderma with plantar blistering","type":"exact"},{"name":"palmoplantar keratoderma, nonepidermolytic, focal or diffuse","type":"exact"}],"termid":"MONDO:0014327","xrefs":{"Monarch":{"xref_id":"0014327"}}}


id: PBO:0075841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 2","termid":"PBO:0075841"}


id: CHEBI:35780
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate ion","termid":"CHEBI:35780"}


id: MONDO:0012671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 3","secondary_identifiers":["MESH:C566949","UMLS:C1969617","MEDGEN:409870","OMIM:611456","DOID:0111430"],"synonyms":[{"name":"ETM3","type":"exact"},{"name":"essential tremor, hereditary, 3","type":"exact"},{"name":"tremor, hereditary essential, 3","type":"exact"}],"termid":"MONDO:0012671","xrefs":{"Monarch":{"xref_id":"0012671"}}}


id: PBO:0011494
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin b5-like gene","termid":"PBO:0011494"}


id: PATO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity inhering in a bearer by virtue of whether the bearer is essential or indispensable.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessity (continuant)","termid":"PATO:0001634"}


id: PBO:0055890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 9","termid":"PBO:0055890"}


id: GO:0170061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to and delivering nickel ions to a target protein.","definition_xrefs":["PMID:32133383","PMID:34530332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"nickel chaperone activity","termid":"GO:0170061"}


id: PR:O74502
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msh6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein msh6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.16c","synonyms":[{"name":"Spom972h-msh6","type":"exact"}],"termid":"PR:O74502"}


id: PBO:0030645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_pH","termid":"PBO:0030645"}


id: PBO:0090276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr6","termid":"PBO:0090276"}


id: PBO:0038483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 8","termid":"PBO:0038483"}


id: PBO:0065821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5C, member RAS oncogene family","termid":"PBO:0065821"}


id: PBO:0109626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTLV-1 related endogenous sequence (pseudogene)","termid":"PBO:0109626"}


id: PBO:0113500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of ATP-binding cassette (ABC) family; targeted to vacuole via AP-3 pathway; involved in bile acid transport; negative regulator of vacuole fusion; regulates release of lumenal Ca2+ stores; similar to mammalian bile transporters; YBT1 has a paralog, VMR1, that arose from the whole genome duplication","termid":"PBO:0113500"}


id: PATO:0001366
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being small and resembling a point.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"punctiform","termid":"PATO:0001366"}


id: MONDO:1011879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotizing meningoencephalitis, non-human animal","secondary_identifiers":["OMIA:001470"],"termid":"MONDO:1011879","xrefs":{"Monarch":{"xref_id":"1011879"}}}


id: GO:0060985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of an epicardial cell to a cardiac vascular smooth muscle cell fate and its capacity to differentiate into a cardiac vascular smooth muscle cell.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac vascular smooth muscle cell fate commitment","termid":"GO:0060949"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac vascular smooth muscle cell differentiation","termid":"GO:0060983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac vascular smooth muscle cell fate commitment","termid":"GO:0060985"}


id: PBO:0056316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K2 divergent transcript","termid":"PBO:0056316"}


id: PBO:0061707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 2","termid":"PBO:0061707"}


id: GO:0010254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the floral nectaries over time, from its formation to the mature structure.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nectary development","termid":"GO:0010254"}


id: PBO:0086601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is increased in ssu72-ts69 mutant","termid":"PBO:0086601"}


id: PBO:0110329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP3S1 pseudogene 1","termid":"PBO:0110329"}


id: PBO:0066222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 26","termid":"PBO:0066222"}


id: PBO:0050672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 7 (pseudogene)","termid":"PBO:0050672"}


id: GO:0007158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a neuron to another cell via adhesion molecules.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"neuron cell-cell adhesion","synonyms":[{"name":"neuron adhesion","type":"exact"},{"name":"neuronal cell adhesion","type":"exact"}],"termid":"GO:0007158"}


id: GO:0048916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line over time, from its formation to the mature structure. The posterior lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the body and trunk of all fishes and most amphibians. The posterior lateral line develops from cranial ectodermal placodes situated behind the ear.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line development","termid":"GO:0048882"},{"relation_name":"part_of","term_name":"posterior lateral line system development","termid":"GO:0048915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line development","synonyms":[{"name":"PLL development","type":"exact"}],"termid":"GO:0048916"}


id: PR:Q10358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RER1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02094","PRO:DNx","PANTHER:PTHR10743:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rer1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.05c","secondary_identifiers":["UniProtKB:Q10358"],"synonyms":[{"name":"Spom972h-RER1","type":"exact"},{"name":"retention of ER proteins 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10358"}


id: PBO:0003149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-AN1 type zinc finger protein","termid":"PBO:0003149"}


id: MOD:02038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-histidine residue with one methyl group.","definition_xrefs":["OMSSA:77","DeltaMass:215","Unimod:34#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated histidine","termid":"MOD:00661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-histidine","synonyms":[{"name":"MOD_RES Methylhistidine","type":"exact"},{"name":"Me1His","type":"exact"},{"name":"Methyl","type":"related"},{"name":"methylh","type":"exact"}],"termid":"MOD:02038"}


id: PBO:0056253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated lung adenocarcinoma transcript 1","termid":"PBO:0056253"}


id: GO:0019508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,5-dihydroxypyridine to form fumarate. 2,5-dihydroxypyridine is dioxygenated to give maleamate and formate; the maleamate from this reaction is then converted to maleate, which is then isomerized to fumurate.","definition_xrefs":["MetaCyc:PWY-722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fumarate metabolic process","termid":"GO:0006106"},{"relation_name":"is_a","term_name":"2,5-dihydroxypyridine catabolic process","termid":"GO:0051166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2,5-dihydroxypyridine catabolic process to fumarate","synonyms":[{"name":"2,5-dihydroxypyridine breakdown to fumarate","type":"exact"},{"name":"2,5-dihydroxypyridine degradation to fumarate","type":"exact"},{"name":"2,5-dihydroxypyridine utilization","type":"related"},{"name":"maleamate pathway","type":"exact"},{"name":"pyridine-2,5-diol catabolic process to fumarate","type":"exact"}],"termid":"GO:0019508"}


id: PBO:0055587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3023","termid":"PBO:0055587"}


id: PBO:0050815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrogen voltage gated channel 1","termid":"PBO:0050815"}


id: FYPO:0007007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the frequency of DNA recombination is normal (i.e. indistinguishable from wild type) downstream of DNA replication fork barriers.","definition_xrefs":["PMID:30667359","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal DNA recombination frequency downstream of mitotic DNA replication fork barriers","synonyms":[{"name":"normal DNA recombination frequency downstream of mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"normal DNA recombination frequency downstream of mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"normal template switching recombination frequency downstream of mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0007007"}


id: PBO:0047437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 8","termid":"PBO:0047437"}


id: GO:0036073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Intramembranous ossification from the surface of a cartilage element as the perichondrium becomes a periosteum, without replacement of cartilage.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramembranous ossification","termid":"GO:0001957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perichondral ossification","termid":"GO:0036073"}


id: PBO:0070054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 11, pseudogene","termid":"PBO:0070054"}


id: PBO:0029552
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_during_cellular_response_to_gamma_radiation","termid":"PBO:0029552"}


id: GO:0032994
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing separate protein and lipid molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein-lipid complex","termid":"GO:0032994"}


id: GO:0045113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of integrin biosynthetic process","synonyms":[{"name":"regulation of integrin anabolism","type":"exact"},{"name":"regulation of integrin biosynthesis","type":"exact"},{"name":"regulation of integrin formation","type":"exact"},{"name":"regulation of integrin synthesis","type":"exact"}],"termid":"GO:0045113"}


id: PBO:0051297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-32 (pseudogene)","termid":"PBO:0051297"}


id: PATO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000988 relative consistency value (obsolete PATO:0000988)","termid":"PATO:0000988"}


id: PBO:0043629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit beta 1","termid":"PBO:0043629"}


id: PBO:0064821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3C","termid":"PBO:0064821"}


id: GO:0042676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cone cells of the compound eye, the lens-secreting cells in the ommatidia, adopt pathways of differentiation that lead to the establishment of their distinct cell type.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"compound eye cone cell differentiation","termid":"GO:0042675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye cone cell fate commitment","secondary_identifiers":["GO:0007466"],"termid":"GO:0042676"}


id: PBO:0070024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1321, pseudogene","termid":"PBO:0070024"}


id: GO:0008674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-2-dehydro-3-deoxy-D-galactonate = D-glyceraldehyde 3-phosphate + pyruvate.","definition_xrefs":["EC:4.1.2.21","RHEA:24464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity","secondary_identifiers":["MetaCyc:DEHYDDEOXPHOSGALACT-ALDOL-RXN","KEGG_REACTION:R01064"],"synonyms":[{"name":"(KDPGal)aldolase activity","type":"related"},{"name":"2-dehydro-3-deoxy-D-galactonate-6-phosphate D-glyceraldehyde-3-phosphate-lyase (pyruvate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-D-galactonate-6-phosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"2-dehydro-3-deoxyphosphogalactonate aldolase activity","type":"exact"},{"name":"2-keto-3-deoxy-6-phosphogalactonic acid aldolase activity","type":"related"},{"name":"2-keto-3-deoxy-6-phosphogalactonic aldolase activity","type":"related"},{"name":"2-oxo-3-deoxygalactonate 6-phosphate aldolase activity","type":"related"},{"name":"6-phospho-2-dehydro-3-deoxygalactonate aldolase activity","type":"related"},{"name":"6-phospho-2-keto-3-deoxygalactonate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygalactonate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygalactonic aldolase activity","type":"related"}],"termid":"GO:0008674"}


