# terms

id: GO:0000720
data:
  {"annotated_genes":["SJAG_00500","SJAG_03613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116136,116137],"is_not":false,"summary":null,"term":"GO:0000720"}]},"cv_name":"biological_process","definition":"The repair of UV-induced T-T, C-T, and C-C dimers by the recognition and removal of the damaged DNA strand from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair","termid":"GO:0006289"},{"relation_name":"is_a","term_name":"pyrimidine dimer repair","termid":"GO:0006290"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00500":null,"SJAG_03613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"pyrimidine dimer repair by nucleotide-excision repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000720","terms_by_termid":{"GO:0000720":null}}


id: PBO:0068238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S pre-ribosomal N4","termid":"PBO:0068238"}


id: MONDO:0014322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ovarian failure in which the cause of the disease is a mutation in the HFM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 9","secondary_identifiers":["MEDGEN:816706","UMLS:C3810376","DOID:0080866","OMIM:615724"],"synonyms":[{"name":"HFM1 primary ovarian failure","type":"exact"},{"name":"Pof9","type":"related"},{"name":"premature ovarian failure 9","type":"exact"},{"name":"premature ovarian failure type 9","type":"exact"},{"name":"primary ovarian failure caused by mutation in HFM1","type":"exact"}],"termid":"MONDO:0014322","xrefs":{"Monarch":{"xref_id":"0014322"}}}


id: GO:0061060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the peptidoglycan recognition protein signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of peptidoglycan recognition protein signaling pathway","termid":"GO:0061058"},{"relation_name":"is_a","term_name":"negative regulation of defense response to bacterium","termid":"GO:1900425"},{"relation_name":"negatively_regulates","term_name":"peptidoglycan recognition protein signaling pathway","termid":"GO:0061057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"negative regulation of peptidoglycan recognition protein signalling pathway","type":"exact"}],"termid":"GO:0061060"}


id: FYPO:0007167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is normal (i.e. indistinguishable from wild type) during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to cell cortex during meiotic prophase I","synonyms":[{"name":"normal protein localisation to cell cortex during meiotic prophase I","type":"exact"},{"name":"normal protein localisation to cell cortex during prophase I","type":"exact"}],"termid":"FYPO:0007167"}


id: SO:0000605
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region containing or overlapping no genes that is bounded on either side by a gene, or bounded by a gene and the end of the chromosome.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Intergenic_region"],"synonyms":[{"name":"intergenic region","type":"exact"}],"termid":"SO:0000605"}


id: MONDO:0017118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with a cerebellar malformation as major feature (obsolete MONDO:0017118)","secondary_identifiers":["Orphanet:269523"],"termid":"MONDO:0017118","xrefs":{"Monarch":{"xref_id":"0017118"}}}


id: PBO:0110479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic lncRNA metabolic regulator 1","termid":"PBO:0110479"}


id: GO:0043673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, sculptured layer of the exine, which lies above the nexine.","definition_xrefs":["PMID:5722147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sexine","termid":"GO:0043673"}


id: GO:1902341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a xylitol across a membrane. Xylitol is a polyalcohol (pentane-1,2,3,4,5-pentol), produced by hydrogenation of xylose.","definition_xrefs":["GOC:TermGenie","PMID:23475614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"xylitol transmembrane transport","synonyms":[{"name":"xylitol transport","type":"broad"}],"termid":"GO:1902341"}


id: MONDO:0032942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly and dysmorphic facies","secondary_identifiers":["UMLS:C5394218","MEDGEN:1719418","OMIM:618828","Orphanet:662179"],"synonyms":[{"name":"NEDMIDF","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY AND DYSMORPHIC FACIES","type":"related"},{"name":"nabais sa-de vries syndrome, type 1","type":"exact"}],"termid":"MONDO:0032942","xrefs":{"Monarch":{"xref_id":"0032942"}}}


id: PBO:0071767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2","termid":"PBO:0071767"}


id: MONDO:0006851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serious condition in which a newborn breathes a mixture of meconium (the first intestinal discharge) and amniotic fluid into the lungs around the time of delivery. Meconium aspiration syndrome occurs in 5-10 percent of births and typically occurs when the infant is stressed, as when the infant is past its due date.","definition_xrefs":["NCIT:C87093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal aspiration syndrome","termid":"MONDO:0024263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meconium aspiration syndrome","secondary_identifiers":["Orphanet:70588","ICD9:770.1","SCTID:206292002","UMLS:C0025048","MedDRA:10027057","icd11.foundation:872221482","MEDGEN:6258","EFO:1001037","GARD:10494","DOID:11049","MESH:D008471"],"synonyms":[{"name":"MAS","type":"exact"},{"name":"aspiration syndrome, meconium","type":"related"},{"name":"aspiration, meconium","type":"related"},{"name":"meconium aspiration","type":"exact"},{"name":"meconium aspiration syndrome","type":"exact"},{"name":"meconium inhalation","type":"related"},{"name":"neonatal aspiration of meconium","type":"exact"},{"name":"syndrome, meconium aspiration","type":"related"}],"termid":"MONDO:0006851","xrefs":{"Monarch":{"xref_id":"0006851"}}}


id: GO:0006314
data:
  {"annotated_genes":["SJAG_MIT05","SJAG_MIT07","SJAG_MIT06"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118468,118469,118476,118477],"is_not":false,"summary":null,"term":"GO:0006314"}]},"cv_name":"biological_process","definition":"Lateral transfer of an intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron.","definition_xrefs":["PMID:10487208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"intron homing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006314","terms_by_termid":{"GO:0006314":null}}


id: GO:0106005
data:
  {"annotated_genes":["SJAG_04034"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59714],"is_not":false,"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The process whereby a guanine in 5-cap is methylated at the N7 position of guanine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA (guanine-N7)-methylation","termid":"GO:0036265"},{"relation_name":"part_of","term_name":"7-methylguanosine RNA capping","termid":"GO:0009452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04034":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA 5'-cap (guanine-N7)-methylation","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0106005","terms_by_termid":{"GO:0106005":null}}


id: GO:2000999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellulose catabolic process","termid":"GO:2000997"},{"relation_name":"positively_regulates","term_name":"cellulose catabolic process","termid":"GO:0030245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellulose catabolic process","synonyms":[{"name":"positive regulation of cellulose breakdown","type":"exact"},{"name":"positive regulation of cellulose catabolism","type":"exact"},{"name":"positive regulation of cellulose degradation","type":"exact"}],"termid":"GO:2000999"}


id: MONDO:0002878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary polypoid malignant neoplasm of the uterine corpus characterized by the presence of a sarcomatous mesenchymal component and a benign epithelial component. Patients usually present with abnormal vaginal bleeding. It is considered a low grade malignant neoplasm and may recur following resection.","definition_xrefs":["NCIT:C6336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine body mixed cancer","termid":"MONDO:0002879"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus adenosarcoma","secondary_identifiers":["MESH:C538232","Orphanet:213600","UMLS:C1336917","ONCOTREE:UAS","MEDGEN:237042","DOID:4113","GARD:20473"],"synonyms":[{"name":"Mullerian adenosarcoma of the uterus","type":"related"},{"name":"adenosarcoma of body of uterus","type":"exact"},{"name":"adenosarcoma of the body of uterus","type":"exact"},{"name":"adenosarcoma of the corpus uteri","type":"exact"},{"name":"adenosarcoma of the uterine body","type":"exact"},{"name":"adenosarcoma of the uterine corpus","type":"exact"},{"name":"adenosarcoma of the uterus","type":"related"},{"name":"adenosarcoma of uterine body","type":"exact"},{"name":"adenosarcoma of uterine corpus","type":"exact"},{"name":"body of uterus adenosarcoma","type":"exact"},{"name":"uterine adenosarcoma","type":"related"},{"name":"uterine body adenosarcoma","type":"exact"},{"name":"uterine corpus Mullerian adenosarcoma","type":"exact"},{"name":"uterine corpus Müllerian adenosarcoma","type":"exact"},{"name":"uterine corpus adenosarcoma","type":"exact"},{"name":"uterine corpus mullerian adenosarcoma","type":"exact"}],"termid":"MONDO:0002878","xrefs":{"Monarch":{"xref_id":"0002878"}}}


id: PR:Q9HDT7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP20C8.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDT7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0321 protein P20C8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP20C8.02c","synonyms":[{"name":"Spom972h-SPCP20C8.02c","type":"exact"}],"termid":"PR:Q9HDT7"}


id: MONDO:0010802
data:
  {"annotated_genes":["SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85772],"is_not":false,"summary":null,"term":"MONDO:0010802"}]},"cv_name":"mondo","definition":"A rare, syndromic diabetes mellitus characterized by partial pancreatic agenesis, diabetes mellitus, and heart anomalies (including transposition of the great vessels, ventricular or atrial septal defects, pulmonary stenosis, or patent ductus arteriosis).","definition_xrefs":["Orphanet:2255"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02730":null},"genotype_count":0,"is_obsolete":false,"name":"pancreatic hypoplasia-diabetes-congenital heart disease syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:347","UMLS:C4012454","MESH:C564011","OMIM:600001","DOID:0111733","MEDGEN:860891","SCTID:722206009"],"synonyms":[{"name":"HDCA","type":"related"},{"name":"Yorifuji Okuno syndrome","type":"related"},{"name":"Yorifuji-Okuno syndrome","type":"exact"},{"name":"congenital pancreatic hypoplasia with diabetes mellitus and congenital heart disease","type":"related"},{"name":"heart defects, congenital, and other congenital anomalies","type":"related"},{"name":"hereditary pancreatic hypoplasia, diabetes mellitus and congenital heart disease","type":"related"},{"name":"pancreatic agenesis and congenital heart defects","type":"related"},{"name":"pancreatic hypoplasia, congenital, with diabetes mellitus and congenital heart disease","type":"related"},{"name":"pancreatic hypoplasia-diabetes-congenital heart disease syndrome","type":"exact"}],"termid":"MONDO:0010802","terms_by_termid":{"MONDO:0010802":null},"xrefs":{"Monarch":{"xref_id":"0010802"}}}


id: PBO:0029178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peptide-serine-N-acetyltransferase_activity","termid":"PBO:0029178"}


id: GO:1904867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a Cajal body.","definition_xrefs":["GOC:TermGenie","GOC:BHF_telomere","PMID:25467444","GOC:nc","GO_REF:0000087","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nuclear body","termid":"GO:1903405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to Cajal body","synonyms":[{"name":"protein localisation in Cajal body","type":"exact"},{"name":"protein localisation to Cajal body","type":"exact"},{"name":"protein localization in Cajal body","type":"exact"}],"termid":"GO:1904867"}


id: MONDO:0011755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Senior-Loken syndrome","termid":"MONDO:0017842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"senior-loken syndrome 3","secondary_identifiers":["GARD:15405","MEDGEN:335569","MESH:C564637","UMLS:C1846980","OMIM:606995"],"synonyms":[{"name":"SENIOR-Loken syndrome 3","type":"related"},{"name":"SLSN3","type":"exact"}],"termid":"MONDO:0011755","xrefs":{"Monarch":{"xref_id":"0011755"}}}


id: PBO:0058286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4662a","termid":"PBO:0058286"}


id: PBO:0035769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_magnesium_level","termid":"PBO:0035769"}


id: GO:0060476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-based process in which a protein is transported to, or maintained in, a specific location in the sperm as part of the acrosome reaction.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"is_a","term_name":"actin filament-based process","termid":"GO:0030029"},{"relation_name":"part_of","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization involved in acrosome reaction","synonyms":[{"name":"protein localisation involved in acrosome reaction","type":"exact"}],"termid":"GO:0060476"}


id: MOD:00055
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-acetylglycine.","definition_xrefs":["RESID:AA0046","PubMed:5545094","PubMed:272676","PubMed:6754709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetylglycine","synonyms":[{"name":"(acetylamino)acetic acid","type":"exact"},{"name":"(acetylazanyl)ethanoic acid","type":"exact"},{"name":"2-(acetamido)ethanoic acid","type":"exact"},{"name":"2-(acetylamino)ethanoic acid","type":"exact"},{"name":"AcGly","type":"exact"},{"name":"MOD_RES N-acetylglycine","type":"exact"},{"name":"N-acetylated glycine","type":"exact"},{"name":"N-acetylglycine","type":"exact"},{"name":"aceturic acid","type":"exact"}],"termid":"MOD:00055"}


id: GO:0030226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an apolipoprotein to initiate a change in cell activity.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"apolipoprotein receptor activity","termid":"GO:0030226"}


id: MONDO:0002710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon lipoma characterized by prominent vascularity that invades the surrounding deep tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infiltrating lipoma","termid":"MONDO:0004075"},{"relation_name":"is_a","term_name":"angiolipoma","termid":"MONDO:0006085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infiltrating angiolipoma","secondary_identifiers":["NCIT:C7449","MEDGEN:227009","DOID:3615","UMLS:C1305256"],"synonyms":[{"name":"angiolipoma, infiltrating","type":"exact"},{"name":"angiolipoma, infiltrating (morphologic abnormality)","type":"exact"},{"name":"infiltrating angiolipoma","type":"exact"}],"termid":"MONDO:0002710","xrefs":{"Monarch":{"xref_id":"0002710"}}}


id: PATO:0000612
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000612 relative orientation value (obsolete PATO:0000612)","termid":"PATO:0000612"}


id: MONDO:0008059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Naegeli-Franceschetti-Jadassohn (NFJ) syndrome is a rare ectodermal dysplasia that affects the skin, sweat glands, nails, and teeth.","definition_xrefs":["Orphanet:69087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Naegeli-Franceschetti-Jadassohn syndrome","secondary_identifiers":["MESH:C538331","DOID:0111528","GARD:3912","MEDGEN:91010","icd11.foundation:352035640","OMIM:161000","SCTID:239084001","UMLS:C0343111"],"synonyms":[{"name":"NAEGELI syndrome","type":"related"},{"name":"NAEGELI-Franceschetti-Jadassohn syndrome","type":"related"},{"name":"NFJ syndrome","type":"exact"},{"name":"NFJS","type":"related"},{"name":"Naegeli syndrome","type":"exact"},{"name":"Naegeli-Franceschetti-Jadassohn syndrome","type":"exact"},{"name":"Nfj syndrome","type":"related"},{"name":"reticular skin changes, dental anomalies, decreased function of sweat glands, strabismus, and optic atrophy","type":"related"}],"termid":"MONDO:0008059","xrefs":{"Monarch":{"xref_id":"0008059"}}}


id: PBO:0076571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3L","termid":"PBO:0076571"}


id: FYPO:0004506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleolar chromatin organization is abnormal, such that nucleolar chromatin is distributed in a ring-shaped structure around the nuclear periphery rather than in a crescent-shaped structure on one side of the nucleus.","definition_xrefs":["GO:1990700","PMID:18362178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleolar chromatin organization","termid":"FYPO:0004505"},{"relation_name":"is_a","term_name":"abnormal chromatin organization resulting in peripheral chromatin distribution","termid":"FYPO:0005350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleolar chromatin organization resulting in peripheral chromatin distribution","synonyms":[{"name":"abnormal chromatin organization at nucleolus resulting in peripheral chromatin distribution","type":"related"},{"name":"abnormal chromosome morphology, hollow bowl phenotype","type":"related"},{"name":"abnormal chromosome morphology, ring phenotype","type":"related"},{"name":"abnormal nucleolar chromatin organisation resulting in peripheral chromatin distribution","type":"exact"},{"name":"abnormal nucleolar chromatin organization resulting in peripheral chromatin distribution during mitotic cell cycle","type":"related"},{"name":"abnormal nucleolar chromatin organization resulting in peripheral chromatin distribution during vegetative growth","type":"exact"},{"name":"abnormal nucleolar chromatin organization resulting in ring-shaped chromatin distribution","type":"exact"},{"name":"nucleolar chromatin abnormally dispersed around nuclear periphery","type":"related"},{"name":"ring-shaped nuclear DNA","type":"related"},{"name":"ring-shaped nuclear chromatin distribution","type":"exact"}],"termid":"FYPO:0004506"}


id: PBO:0053325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 114","termid":"PBO:0053325"}


id: MONDO:0015656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metabolic disease with epilepsy (obsolete MONDO:0015656)","secondary_identifiers":["Orphanet:166481"],"synonyms":[{"name":"metabolic diseases with epilepsy","type":"exact"}],"termid":"MONDO:0015656","xrefs":{"Monarch":{"xref_id":"0015656"}}}


id: MONDO:0021339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the hard palate.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hard palate cancer","termid":"MONDO:0004719"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of hard palate","secondary_identifiers":["MEDGEN:138019","NCIT:C8394","UMLS:C0345550","SCTID:254434008"],"synonyms":[{"name":"carcinoma of hard palate","type":"exact"},{"name":"carcinoma of the hard palate","type":"exact"},{"name":"hard palate carcinoma","type":"exact"}],"termid":"MONDO:0021339","xrefs":{"Monarch":{"xref_id":"0021339"}}}


id: MONDO:0030480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 119","secondary_identifiers":["MEDGEN:1794233","OMIM:619615","UMLS:C5562023"],"synonyms":[{"name":"DFNB119","type":"exact"},{"name":"deafness, autosomal recessive 119","type":"narrow"}],"termid":"MONDO:0030480","xrefs":{"Monarch":{"xref_id":"0030480"}}}


id: SO:0000815
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"By definition, minigenes are short open-reading frames (ORF), usually encoding approximately 9 to 20 amino acids, which are expressed in vivo (as distinct from being synthesized as peptide or protein ex vivo and subsequently injected). The in vivo synthesis confers a distinct advantage: the expressed sequences can enter both antigen presentation pathways, MHC I (inducing CD8+ T- cells, which are usually cytotoxic T-lymphocytes (CTL)) and MHC II (inducing CD4+ T-cells, usually 'T-helpers' (Th)); and can encounter B-cells, inducing antibody responses. Three main vector approaches have been used to deliver minigenes: viral vectors, bacterial vectors and plasmid DNA.","definition_xrefs":["PMID:15992143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ORF","termid":"SO:0000236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mini_gene","synonyms":[{"name":"mini gene","type":"exact"}],"termid":"SO:0000815"}


id: PR:Q10088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.09","synonyms":[{"name":"AUH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC11D3.09","type":"exact"},{"name":"agmatine ureohydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10088"}


id: PBO:0004302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-60S shuttlingfactor (predicted)","termid":"PBO:0004302"}


id: GO:0030169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a low-density lipoprotein particle, a lipoprotein particle that is rich in cholesterol esters and low in triglycerides, is typically composed of APOB100 and APOE, and has a density of 1.02-1.06 g/ml and a diameter of between 20-25 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"low-density lipoprotein particle binding","synonyms":[{"name":"LDL binding","type":"exact"}],"termid":"GO:0030169"}


id: PBO:0039610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANTXR like","termid":"PBO:0039610"}


id: PR:P0CT59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2202 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S22-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.01","synonyms":[{"name":"Spom972h-rps2202","type":"exact"}],"termid":"PR:P0CT59"}


id: PBO:0114380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface membrane anchored protein, probably carbohydrate binding domain","termid":"PBO:0114380"}


id: PBO:0001692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SnoRNA (predicted)","termid":"PBO:0001692"}


id: SO:1000182
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_variation","termid":"SO:0000240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_number_variation","synonyms":[{"name":"Jannovar:chromosome_number_variation","type":"exact"},{"name":"chromosome number variation","type":"exact"}],"termid":"SO:1000182"}


id: PBO:0026825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0026825"}


id: PBO:0029119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_cell_with_increased_DNA_content_during_stationary_phase","termid":"PBO:0029119"}


id: GO:0106159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent small RNA loading onto RISC.","definition_xrefs":["PMID:29775584","GOC:ha"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of small RNA loading onto RISC (obsolete GO:0106159)","termid":"GO:0106159"}


id: PBO:0072928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 9","termid":"PBO:0072928"}


id: PBO:0005569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex subunit Vps35","termid":"PBO:0005569"}


id: FYPO:0005890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to calcium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to calcium ion","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to calcium ion","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to calcium","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to calcium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005890"}


id: PBO:0091454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi5","termid":"PBO:0091454"}


id: PBO:0062544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily I member 3 pseudogene","termid":"PBO:0062544"}


id: PR:O94704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iec3 gene.","definition_xrefs":["UniProtKB:O94704","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.04","synonyms":[{"name":"Spom972h-iec3","type":"exact"}],"termid":"PR:O94704"}


id: GO:0061419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to hypoxia (obsolete GO:0061419)","termid":"GO:0061419"}


id: PBO:0085162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide pyrophosphatase/phosphodiesterase; mediates extracellular nucleotide phosphate hydrolysis along with Npp1p and Pho5p; activity and expression enhanced during conditions of phosphate starvation; involved in spore wall assembly; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; NPP2 has a paralog, NPP1, that arose from the whole genome duplication; npp1 npp2 double mutant exhibits reduced dityrosine fluorescence relative to single mutants","termid":"PBO:0085162"}


id: PBO:0041264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q binding protein pseudogene 1","termid":"PBO:0041264"}


id: PBO:0055798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a) like 2, pseudogene","termid":"PBO:0055798"}


id: PBO:0113396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulator of 1,3-beta-glucan biosynthesis; interacts with the catalytic (Fks1p and Gsc2p) and regulatory subunits (Rho1p) of 1,3-beta-glucan synthase; has a negative genetic interaction with RHO1; localizes to the cell periphery during early G1, to the bud tip in late G1, to the bud at S/G2, to the periphery of the bud at metaphase and at the bud neck during telophase; periodically expressed during the cell cycle; protein abundance increases in response to DNA replication stress","termid":"PBO:0113396"}


id: PBO:0046759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 1","termid":"PBO:0046759"}


id: MONDO:0044635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"DIAPH1-related sensorineural hearing loss-thrombocytopenia syndrome","secondary_identifiers":["GARD:17904","Orphanet:494444","UMLS:C5567465","MEDGEN:1798888"],"synonyms":[{"name":"DIAPH1-related sensorineural hearing loss-thrombocytopenia syndrome","type":"exact"}],"termid":"MONDO:0044635","xrefs":{"Monarch":{"xref_id":"0044635"}}}


id: PR:Q9US04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-glutamyltranspeptidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00702","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.09","secondary_identifiers":["UniProtKB:Q9US04"],"synonyms":[{"name":"Spom972h-GGT1","type":"exact"},{"name":"gamma-glutamyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutathione hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US04"}


id: PBO:0016121
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is located in the silent mating type region, it is only transcribed when at the mat1 locus (mat1-Pi). The pombe sequence reference strain is h-, therefore annotations are attached to this gene and not mat1-Pi","termid":"PBO:0016121"}


id: GO:0007306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the chorion portion of the egg, which is a protective, noncellular membrane that surrounds the eggs of various animals including insects and fish.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu","PMID:24804966","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"egg chorion assembly","synonyms":[{"name":"eggshell chorion formation","type":"related"},{"name":"insect chorion formation","type":"related"}],"termid":"GO:0007306"}


id: PBO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination protein Irc6 (predicted)","termid":"PBO:0001563"}


id: PBO:0031146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_polysaccharide_level","termid":"PBO:0031146"}


id: GO:1905527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Golgi lumen acidification.","definition_xrefs":["GOC:dph","PMID:23447592","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular pH reduction","termid":"GO:0032848"},{"relation_name":"is_a","term_name":"regulation of Golgi lumen acidification","termid":"GO:1905526"},{"relation_name":"negatively_regulates","term_name":"Golgi lumen acidification","termid":"GO:0061795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Golgi lumen acidification","synonyms":[{"name":"down regulation of Golgi lumen acidification","type":"exact"},{"name":"down-regulation of Golgi lumen acidification","type":"exact"},{"name":"downregulation of Golgi lumen acidification","type":"exact"},{"name":"inhibition of Golgi lumen acidification","type":"narrow"}],"termid":"GO:1905527"}


id: PBO:0065489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 3 interacting protein 1","termid":"PBO:0065489"}


id: PBO:0013831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine ammonia-lyase","termid":"PBO:0013831"}


id: RO:0002440
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A biotic interaction in which the two organisms live together in more or less intimate association.","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbiotically_interacts_with","termid":"RO:0002440"}


id: PBO:0040770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 5","termid":"PBO:0040770"}


id: GO:0042357
data:
  {"annotated_genes":["SJAG_04866","SJAG_02420","SJAG_00381","SJAG_04282","SJAG_03362","SJAG_02421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93799,113037,115465,113450,99024,113031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"thiamine diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TPP metabolic process","type":"exact"},{"name":"TPP metabolism","type":"exact"},{"name":"thiamin diphosphate metabolic process","type":"exact"},{"name":"thiamin diphosphate metabolism","type":"exact"},{"name":"thiamin pyrophosphate metabolic process","type":"exact"},{"name":"thiamin pyrophosphate metabolism","type":"exact"},{"name":"thiamine diphosphate metabolism","type":"exact"},{"name":"thiamine pyrophosphate metabolic process","type":"exact"},{"name":"thiamine pyrophosphate metabolism","type":"exact"}],"termid":"GO:0042357","terms_by_termid":{"GO:0009229":null}}


id: FYPO_EXT:1000002
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"FYPO extension ontology grouping term for relations relevant to penetrance","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO extension","termid":"FYPO_EXT:1000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}


id: PBO:0031731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiosis","termid":"PBO:0031731"}


id: MONDO:0700136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital metabolic disorder characterized by a deficiency in the enzyme ferrochelatase, which occurs in cattle.","definition_xrefs":["NCIT:C131472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine neoplasm","termid":"MONDO:0700134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bovine protoporphyria","termid":"MONDO:0700136","xrefs":{"Monarch":{"xref_id":"0700136"}}}


id: PBO:0092001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific trancription factor Pc","termid":"PBO:0092001"}


id: MONDO:0019216
data:
  {"annotated_genes":["SJAG_01152","SJAG_04157","SJAG_02848","SJAG_02180","SJAG_05342","SJAG_01526","SJAG_02947","SJAG_02384","SJAG_02955","SJAG_03375","SJAG_01298","SJAG_01634","SJAG_02150","SJAG_03592","SJAG_03400","SJAG_01998","SJAG_03557","SJAG_04497","SJAG_01797","SJAG_01059","SJAG_01422","SJAG_02295","SJAG_02946","SJAG_04296","SJAG_00643","SJAG_03795","SJAG_04637","SJAG_04334","SJAG_04529","SJAG_03827","SJAG_02084","SJAG_01851","SJAG_00531","SJAG_02712","SJAG_02163","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014392"},{"annotations":[84785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014593"},{"annotations":[84795,84796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014598"},{"annotations":[84759,84760,84761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014625"},{"annotations":[86682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014933"},{"annotations":[85755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009448"},{"annotations":[86751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010645"},{"annotations":[85854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008379"},{"annotations":[85603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010828"},{"annotations":[85743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010806"},{"annotations":[85659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011075"},{"annotations":[86707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010723"},{"annotations":[86202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012363"},{"annotations":[84597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012477"},{"annotations":[86285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013468"},{"annotations":[84996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013516"},{"annotations":[85375,85376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013611"},{"annotations":[85360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014256"},{"annotations":[86124,86119,86120,86123,86126,86127,86122,86125,86121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014323"},{"annotations":[85807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014400"},{"annotations":[86361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015013"},{"annotations":[86240,86241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044320"},{"annotations":[85769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032604"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid 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transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:16784003","UMLS:C0268641","MEDGEN:541381","GARD:18948","icd11.foundation:1631611896","ICD9:270.0","Orphanet:79166"],"synonyms":[{"name":"disorder of amino acid absorption and transport","type":"related"},{"name":"inborn disorder of amino acid absorption and transport","type":"exact"}],"termid":"MONDO:0019216","terms_by_termid":{"MONDO:0008379":null,"MONDO:0009448":null,"MONDO:0010645":null,"MONDO:0010723":null,"MONDO:0010806":null,"MONDO:0010828":null,"MONDO:0011075":null,"MONDO:0012363":null,"MONDO:0012477":null,"MONDO:0013468":null,"MONDO:0013516":null,"MONDO:0013611":null,"MONDO:0014256":null,"MONDO:0014323":null,"MONDO:0014392":null,"MONDO:0014400":null,"MONDO:0014593":null,"MONDO:0014598":null,"MONDO:0014625":null,"MONDO:0014933":null,"MONDO:0015013":null,"MONDO:0032604":null,"MONDO:0044320":null},"xrefs":{"Monarch":{"xref_id":"0019216"}}}


id: PBO:0113305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in establishment of cell polarity and bud emergence; regulates filamentous-growth mitogen-activated protein kinase (MAPK) pathway; interacts with the Rho1p small GTP-binding protein, the pleckstrin homology (PH) domain of Cdc24p, and with the Rho-type GTPase Cdc42p; stabilizes Cdc42p levels, resulting in elevated fMAPK pathway signaling; involved in maintenance of proper telomere length","termid":"PBO:0113305"}


id: PBO:0065237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 5","termid":"PBO:0065237"}


id: PBO:0062049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily U member 1 pseudogene","termid":"PBO:0062049"}


id: GO:0044741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the inhibition of the sensory perception of pain in the bitten organism.","definition_xrefs":["GOC:jl","PMID:23034652","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of sensory perception of pain in another organism","termid":"GO:0044742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of sensory perception of pain in another organism","synonyms":[{"name":"envenomation resulting in inhibition of sensory perception of pain in other organism","type":"exact"},{"name":"envenomation resulting in negative regulation of sensory perception of pain in other organism","type":"exact"}],"termid":"GO:0044741"}


id: GO:0002747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen via phagocytosis.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation following phagocytosis","termid":"GO:0002747"}


id: PBO:0074646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 36C","termid":"PBO:0074646"}


id: MONDO:0010617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by hypergonadotropic hypogonadism, intellectual deficit, congenital skeletal anomalies involving the cervical spine and superior ribs, and diabetes mellitus.","definition_xrefs":["Orphanet:2234"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male hypergonadotropic hypogonadism-intellectual disability-skeletal anomalies syndrome","secondary_identifiers":["GARD:4899","OMIM:307500","MEDGEN:334557","MESH:C564406","SCTID:722459008","UMLS:C1843994"],"synonyms":[{"name":"Sohval-Soffer syndrome","type":"exact"},{"name":"hypogonadism, MALE, with intellectual disability and skeletal anomalies","type":"related"},{"name":"hypogonadism, MALE, with mental retardation and skeletal anomalies","type":"related"}],"termid":"MONDO:0010617","xrefs":{"Monarch":{"xref_id":"0010617"}}}


id: PBO:0047063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120C","termid":"PBO:0047063"}


id: FYPO:0007263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer eisosomes than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eisosome","termid":"FYPO:0007262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"eisosomes present in decreased numbers","synonyms":[{"name":"decreased eisosome number","type":"exact"},{"name":"decreased number of eisosomes present","type":"exact"},{"name":"eisosomes present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"eisosomes present in decreased numbers during vegetative growth","type":"exact"},{"name":"eisosomes present in reduced numbers","type":"exact"},{"name":"fewer eisosomes present","type":"exact"}],"termid":"FYPO:0007263"}


id: PBO:0111809
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin family","termid":"PBO:0111809"}


id: GO:0170063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a solute from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["PMID:26631267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"}


id: PBO:0003854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Ssr4","termid":"PBO:0003854"}


id: MONDO:0014464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive encephalopathy with leukodystrophy due to DECR deficiency is a rare mitochondrial disease, which presents with neonatal hypotonia, central nervous system abnormalities (ventriculomegaly, corpus callosum hypoplasia, cerebellar atrophy), acquired microcephaly, failure to thrive, developmental delay and intermittent lactic acidosis provoked by catabolic stress (e.g. infection). Hyperlysinemia and elevated C10:2 carnitine can be detected in plasma. Later on, epilepsy, cerebellar ataxia, renal tubular acidosis, severe encephalopathy, dystonia, spastic quadriplegia and other complications may develop.","definition_xrefs":["Orphanet:431361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"progressive encephalopathy with leukodystrophy due to DECR deficiency","secondary_identifiers":["GARD:10327","MEDGEN:346552","MESH:C565624","OMIM:616034","UMLS:C1857252"],"synonyms":[{"name":"2,4-alpha dienoyl-CoA reductase deficiency","type":"related"},{"name":"2,4-dienoyl-CoA reductase deficiency","type":"exact"},{"name":"DECR deficiency with hyperlysinemia","type":"exact"},{"name":"DECRD","type":"related"},{"name":"dienoyl-CoA reductase deficiency","type":"related"},{"name":"progressive encephalopathy with leukodystrophy due to DECR deficiency","type":"exact"}],"termid":"MONDO:0014464","xrefs":{"Monarch":{"xref_id":"0014464"}}}


id: GO:0032189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an actomyosin contractile ring is maintained in a location and prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of actomyosin contractile ring localization (obsolete GO:0032189)","synonyms":[{"name":"cytokinetic ring anchoring","type":"related"},{"name":"maintenance of contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"maintenance of contractile ring localization involved in cell cycle cytokinesis","type":"exact"},{"name":"maintenance of contractile ring localization involved in cytokinesis during cell cycle","type":"related"}],"termid":"GO:0032189"}


id: PBO:0076115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 18 pseudogene 1","termid":"PBO:0076115"}


id: SO:0000673
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA synthesized on a DNA or RNA template by an RNA polymerase.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"},{"relation_name":"overlaps","term_name":"unit_of_gene_expression","termid":"SO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript","secondary_identifiers":["http://en.wikipedia.org/wiki/RNA"],"synonyms":[{"name":"INSDC_feature:misc_RNA","type":"broad"}],"termid":"SO:0000673"}


id: PBO:0062482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily A member 1","termid":"PBO:0062482"}


id: MONDO:0034099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic developmental and epileptic encephalopathy (DEE) characterized by developmental delay, generalized epilepsy consisting of eyelid myoclonia with absences and myoclonic-atonic seizures, intellectual disability and autism spectrum disorder (ASD).","definition_xrefs":["Orphanet:544254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"SYNGAP1-related developmental and epileptic encephalopathy","secondary_identifiers":["MEDGEN:1810512","GARD:22232","UMLS:C5680163"],"termid":"MONDO:0034099","xrefs":{"Monarch":{"xref_id":"0034099"}}}


id: PBO:0051574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17C","termid":"PBO:0051574"}


id: PBO:0090893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,6-mannosyltransferase Och1","termid":"PBO:0090893"}


id: GO:1903787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutathione biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of glutathione biosynthetic process","termid":"GO:1903786"},{"relation_name":"negatively_regulates","term_name":"glutathione biosynthetic process","termid":"GO:0006750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"negative regulation of glutathione biosynthetic process","synonyms":[{"name":"down regulation of glutathione anabolism","type":"exact"},{"name":"down regulation of glutathione biosynthesis","type":"exact"},{"name":"down regulation of glutathione biosynthetic process","type":"exact"},{"name":"down regulation of glutathione formation","type":"exact"},{"name":"down regulation of glutathione synthesis","type":"exact"},{"name":"down-regulation of glutathione anabolism","type":"exact"},{"name":"down-regulation of glutathione biosynthesis","type":"exact"},{"name":"down-regulation of glutathione biosynthetic process","type":"exact"},{"name":"down-regulation of glutathione formation","type":"exact"},{"name":"down-regulation of glutathione synthesis","type":"exact"},{"name":"downregulation of glutathione anabolism","type":"exact"},{"name":"downregulation of glutathione biosynthesis","type":"exact"},{"name":"downregulation of glutathione biosynthetic process","type":"exact"},{"name":"downregulation of glutathione formation","type":"exact"},{"name":"downregulation of glutathione synthesis","type":"exact"},{"name":"inhibition of glutathione anabolism","type":"narrow"},{"name":"inhibition of glutathione biosynthesis","type":"narrow"},{"name":"inhibition of glutathione biosynthetic process","type":"narrow"},{"name":"inhibition of glutathione formation","type":"narrow"},{"name":"inhibition of glutathione synthesis","type":"narrow"},{"name":"negative regulation of glutathione anabolism","type":"exact"},{"name":"negative regulation of glutathione biosynthesis","type":"exact"},{"name":"negative regulation of glutathione formation","type":"exact"},{"name":"negative regulation of glutathione synthesis","type":"exact"}],"termid":"GO:1903787"}


id: PBO:0066335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 1","termid":"PBO:0066335"}


id: FYPO:0005557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin unloading is decreased during the mitotic cell cycle. Cohesin unloading is the topological unlinking of a cohesin ring complex from chromatin, which negatively regulates sister chromatid cohesion.","definition_xrefs":["GO:0061781","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic cohesin unloading","synonyms":[{"name":"decreased cohesin unloading during mitotic cell cycle","type":"exact"},{"name":"decreased cohesin unloading during vegetative growth","type":"exact"},{"name":"reduced cohesin unloading","type":"exact"}],"termid":"FYPO:0005557"}


id: GO:0060419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of the heart.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart growth","termid":"GO:0060419"}


id: PBO:0061777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCA2 melanosomal transmembrane protein","termid":"PBO:0061777"}


id: GO:0070480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs independent of deadenylation, but requires decapping followed by transcript decay.","definition_xrefs":["GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-independent decay (obsolete GO:0070480)","termid":"GO:0070480"}


id: GO:0062000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac endothelial to mesenchymal trnasition.","definition_xrefs":["PMID:26857067","GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0061999"},{"relation_name":"positively_regulates","term_name":"cardiac endothelial to mesenchymal transition","termid":"GO:0140074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0062000"}


id: PBO:0028815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_primary_amine_oxidase_activity","termid":"PBO:0028815"}


id: PBO:0083578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; putative HLH protein; partially overlaps the verified ORF MAL11/YGR289C (a high-affinity maltose transporter)","termid":"PBO:0083578"}


id: PBO:0046526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum oxidoreductase 1 alpha","termid":"PBO:0046526"}


id: GO:1900128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G-protein activated inward rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inward rectifier potassium channel activity","termid":"GO:1901979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of G-protein activated inward rectifier potassium channel activity","synonyms":[{"name":"regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"}],"termid":"GO:1900128"}


id: PBO:0038712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 7","termid":"PBO:0038712"}


id: PBO:0083377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps 5' end of the verified essential gene SUI3/YPL237W","termid":"PBO:0083377"}


id: PBO:0068336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 44","termid":"PBO:0068336"}


id: GO:0052916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine(1835) in 23S rRNA = N(2)-methylguanosine(1835) in 23S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N2-)-methyltransferase activity","termid":"GO:0008990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"23S rRNA (guanine(1835)-N(2))-methyltransferase activity","secondary_identifiers":["RHEA:42744","MetaCyc:RXN-11635"],"termid":"GO:0052916"}


id: PBO:0084945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multifunctional enzyme containing phosphoribosyl-ATP pyrophosphatase; phosphoribosyl-AMP cyclohydrolase, and histidinol dehydrogenase activities; catalyzes the second, third, ninth and tenth steps in histidine biosynthesis","termid":"PBO:0084945"}


id: MONDO:1012549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetrical occipital condylar dysplasia, non-human animal","termid":"MONDO:1011970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymmetrical occipital condylar dysplasia, sheep","secondary_identifiers":["OMIA:002422-9940"],"termid":"MONDO:1012549","xrefs":{"Monarch":{"xref_id":"1012549"}}}


id: PBO:0002977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper of TIM (predicted)","termid":"PBO:0002977"}


id: PBO:0065249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20B","termid":"PBO:0065249"}


id: PBO:0086795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBL044W is not an essential protein","termid":"PBO:0086795"}


id: PBO:0077509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 229A","termid":"PBO:0077509"}


id: PBO:0005322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGC family protein kinase Gad8","termid":"PBO:0005322"}


id: PBO:0017090
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COX18","termid":"PBO:0017090"}


id: MONDO:0010315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency (SCID) due to gamma chain deficiency, also called SCID-X1, is a form of SCID characterized by severe and recurrent infections, associated with diarrhea and failure to thrive.","definition_xrefs":["Orphanet:276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"},{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B+ severe combined immunodeficiency due to gamma chain deficiency","secondary_identifiers":["GARD:5618","NANDO:2200694","UMLS:C1279481","MEDGEN:220906","NCIT:C4682","NANDO:1200321","EFO:0005555","DOID:0060013","SCTID:203592006","OMIM:300400"],"synonyms":[{"name":"SCID, X-linked","type":"related"},{"name":"SCID-X1","type":"exact"},{"name":"SCIDX","type":"related"},{"name":"SCIDX1","type":"exact"},{"name":"T-B+ SCID due to gamma chain deficiency","type":"exact"},{"name":"T-B+ severe combined immunodeficiency due to gamma chain deficiency","type":"exact"},{"name":"T-B+ severe combined immunodeficiency, X-linked","type":"exact"},{"name":"X-SCID","type":"related"},{"name":"X-linked SCID","type":"related"},{"name":"X-linked severe combined immunodeficiency","type":"exact"},{"name":"XSCID","type":"exact"},{"name":"immunodeficiency 4","type":"related"},{"name":"severe combined immunodeficiency T- B+ due to gamma chain deficiency","type":"related"},{"name":"severe combined immunodeficiency T- B+, X-linked","type":"related"},{"name":"severe combined immunodeficiency, X-linked","type":"related"},{"name":"severe combined immunodeficiency, X-linked, T cell-negative, B cell-positive, NK cell-negative","type":"related"},{"name":"severe combined immunodeficiency, X-linked, X-linked recessive","type":"exact"},{"name":"thymic epithelial hypoplasia","type":"exact"}],"termid":"MONDO:0010315","xrefs":{"Monarch":{"xref_id":"0010315"}}}


id: PBO:0090356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase beta subunit Lsc2","termid":"PBO:0090356"}


id: PBO:0049255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin and cysteine rich domain containing 1","termid":"PBO:0049255"}


id: GO:1900737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase C-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:1900736"},{"relation_name":"negatively_regulates","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"down regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"down regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"down regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"down regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"down regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"down-regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"down-regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"down-regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"down-regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"down-regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"downregulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"downregulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"downregulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"downregulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"downregulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"inhibition of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"inhibition of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"inhibition of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"inhibition of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"narrow"},{"name":"inhibition of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"negative regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"negative regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"negative regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"negative regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"negative regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"}],"termid":"GO:1900737"}


id: GO:0016710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cinnamate + NADPH + H+ + O2 = 4-hydroxycinnamate + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trans-cinnamate 4-monooxygenase activity","secondary_identifiers":["RHEA:10608","MetaCyc:TRANS-CINNAMATE-4-MONOOXYGENASE-RXN"],"synonyms":[{"name":"CA4H activity","type":"narrow"},{"name":"cinnamate 4-hydroxylase activity","type":"related"},{"name":"cinnamate 4-monooxygenase activity","type":"related"},{"name":"cinnamate hydroxylase activity","type":"related"},{"name":"cinnamic 4-hydroxylase activity","type":"related"},{"name":"cinnamic acid 4-hydroxylase activity","type":"related"},{"name":"cinnamic acid 4-monooxygenase activity","type":"related"},{"name":"cinnamic acid p-hydroxylase activity","type":"related"},{"name":"cytochrome P450 cinnamate 4-hydroxylase activity","type":"related"},{"name":"hydroxylase, cinnamate 4-","type":"related"},{"name":"oxygenase, cinnamate 4-mono-","type":"related"},{"name":"t-cinnamic acid hydroxylase activity","type":"related"},{"name":"trans-cinnamate 4-hydroxylase activity","type":"related"},{"name":"trans-cinnamate,NADPH:oxygen oxidoreductase (4-hydroxylating)","type":"related"},{"name":"trans-cinnamic acid 4-hydroxylase activity","type":"related"}],"termid":"GO:0016710"}


id: PR:Q10143
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12409:SF0","PRO:DNx","OMA:SCHPO00236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.07c","secondary_identifiers":["UniProtKB:Q10143"],"synonyms":[{"name":"Spom972h-VBP1","type":"exact"}],"termid":"PR:Q10143"}


id: GO:0071973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility due to the motion of one or more bacterial-type flagella. A bacterial-type flagellum is a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope.","definition_xrefs":["GOC:krc","GOC:cilia","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"archaeal or bacterial-type flagellum-dependent cell motility","termid":"GO:0097588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacterial-type flagellum-dependent cell motility","synonyms":[{"name":"bacterial-type flagellar cell motility","type":"related"},{"name":"flagellin-based flagellar cell motility","type":"exact"}],"termid":"GO:0071973"}


id: FYPO:0001197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular calcium level","synonyms":[{"name":"decreased calcium accumulation","type":"related"},{"name":"decreased cellular calcium ion level","type":"exact"},{"name":"decreased cellular calcium level during mitotic cell cycle","type":"related"},{"name":"decreased cellular calcium level during vegetative growth","type":"exact"},{"name":"reduced cellular calcium level","type":"exact"}],"termid":"FYPO:0001197"}


id: PBO:0060302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL12A and MYL12B antisense RNA 1","termid":"PBO:0060302"}


id: PBO:0070069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 26, pseudogene","termid":"PBO:0070069"}


id: PBO:0034574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_stable_microtubule_bundle","termid":"PBO:0034574"}


id: GO:0030374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transcription coactivator activity that activates or increases the transcription of specific gene sets via binding to a DNA-bound nuclear receptor, either on its own or as part of a complex. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators. A fourth class of coactivator activity is the bridging of a DNA-binding transcription factor to the general (basal) transcription machinery. The Mediator complex, which bridges sequence-specific DNA binding transcription factors and RNA polymerase, is also a transcription coactivator.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear receptor coactivator activity (obsolete GO:0030374)","synonyms":[{"name":"ligand-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"},{"name":"ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"},{"name":"nuclear receptor transcription coactivator activity","type":"exact"},{"name":"transcription factor activity, ligand-activated RNA polymerase II transcription factor binding","type":"exact"}],"termid":"GO:0030374"}


id: GO:0045177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical part of cell","synonyms":[{"name":"apical region of cell","type":"exact"}],"termid":"GO:0045177"}


id: PBO:0091777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple inositol polyphosphate phosphatase","termid":"PBO:0091777"}


id: PBO:0077442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 176B","termid":"PBO:0077442"}


id: PBO:0043847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase X, M14 family member 2","termid":"PBO:0043847"}


id: GO:0070513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a death domain of a protein. The death domain (DD) is a homotypic protein interaction module composed of a bundle of six alpha-helices. DD bind each other forming oligomers. Some DD-containing proteins are involved in the regulation of apoptosis and inflammation through their activation of caspases and NF-kappaB.","definition_xrefs":["InterPro:IPR000488","GOC:rl","Pfam:PF00531","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"death domain binding","termid":"GO:0070513"}


id: GO:0004739
data:
  {"annotated_genes":["SJAG_03064","SJAG_02006"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94509,108054],"is_not":false,"summary":null,"term":"GO:0004739"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2.","definition_xrefs":["EC:1.2.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase activity","termid":"GO:0004738"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","termid":"GO:0016624"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02006":null,"SJAG_03064":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pyruvate dehydrogenase (acetyl-transferring) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9861734","RHEA:19189","MetaCyc:RXN0-1134"],"synonyms":[{"name":"MtPDC (mitochondrial pyruvate dehydogenase complex) activity","type":"narrow"},{"name":"PDH","type":"related"},{"name":"pyruvate dehydrogenase (lipoamide) activity","type":"exact"},{"name":"pyruvate dehydrogenase complex activity","type":"related"},{"name":"pyruvate:dihydrolipoyllysine-residue acetyltransferase-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-acetylating)","type":"related"},{"name":"pyruvate:lipoamide 2-oxidoreductase (decarboxylating and acceptor-acetylating) activity","type":"related"}],"termid":"GO:0004739","terms_by_termid":{"GO:0004739":null}}


id: GO:0010734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein glutathionylation. Protein glutathionylation is the protein modification process in which a glutathione molecule is added to a protein amino acid through a disulfide linkage.","definition_xrefs":["GOC:dph","GOC:rl","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein glutathionylation","termid":"GO:0010732"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"negatively_regulates","term_name":"protein glutathionylation","termid":"GO:0010731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein glutathionylation","synonyms":[{"name":"negative regulation of protein amino acid glutathionylation","type":"exact"}],"termid":"GO:0010734"}


id: GO:0050117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-beta-alanine + H2O = beta-alanine + acetate.","definition_xrefs":["EC:3.5.1.21","RHEA:23212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787","GO:0019213"],"is_obsolete":false,"name":"N-acetyl-beta-alanine deacetylase activity","secondary_identifiers":["MetaCyc:N-ACETYL-BETA-ALANINE-DEACETYLASE-RXN","KEGG_REACTION:R00909"],"synonyms":[{"name":"N-acetyl-beta-alanine amidohydrolase activity","type":"related"}],"termid":"GO:0050117"}


id: GO:0061350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the cardiac muscle tissue.","definition_xrefs":["GOC:dph","GOC:mtg_heart","PMID:19056682"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in cardiac muscle tissue morphogenesis (obsolete GO:0061350)","termid":"GO:0061350"}


id: PATO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000391 intense (obsolete PATO:0000391)","termid":"PATO:0000391"}


id: PBO:0042121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 194","termid":"PBO:0042121"}


id: MOD:01218
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:15283597","Unimod:285#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), light C12","termid":"MOD:00605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12 - site E","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:01218"}


id: PBO:0071584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a like","termid":"PBO:0071584"}


id: PBO:0087128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein; involved in the cleavage step of mRNA 3'-end formation prior to polyadenylation, and in snoRNA maturation; part of holo-CPF subcomplex APT, which associates with 3'-ends of snoRNA- and mRNA-encoding genes; putative regulatory subunit of type 1 protein phosphatase Glc7p, required for actomyosin ring formation, and for timely dephosphorylation and release of Bnr1p from the division site; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087128"}


id: PBO:0082090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' exonuclease, 5' flap endonuclease; required for Okazaki fragment processing and maturation, for long-patch base-excision repair and large loop repair (LLR), ribonucleotide excision repair; member of the S. pombe RAD2/FEN1 family; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082090"}


id: GO:0035815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal sodium excretion","termid":"GO:0035813"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of renal sodium excretion","synonyms":[{"name":"natriuresis","type":"broad"}],"termid":"GO:0035815"}


id: MONDO:0018988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iridocorneal endothelial (ICE) syndrome describes a group of progressive corneal proliferative endotheliopathies comprised of Chandler syndrome, Cogan-Reese syndrome and essential iris atrophy, affecting mainly young adult females and characterized by iris holes and atrophy, papillary distortion, anterior synechiae, corneal edema and often with secondary glaucoma and corneal decompensation as complications","definition_xrefs":["Orphanet:64734"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare acquired eye disease (obsolete MONDO:0015120)","termid":"MONDO:0015120"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glaucoma due to a proliferation and differentiation anomaly (obsolete MONDO:0020221)","termid":"MONDO:0020221"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iridocorneal endothelial syndrome","secondary_identifiers":["SCTID:129623003","MEDGEN:242751","UMLS:C1096100","NCIT:C84792","MESH:D057129","GARD:60","icd11.foundation:265074385","MedDRA:10053678"],"synonyms":[{"name":"ICE syndrome","type":"exact"}],"termid":"MONDO:0018988","xrefs":{"Monarch":{"xref_id":"0018988"}}}


id: MONDO:0012627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing juvenile myclonic epilepsy, idiopathic generalized epilepsy, or childhood absence epilepsy in which the cause of the disease is a mutation in the GABRA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 13","secondary_identifiers":["MEDGEN:861910","DOID:0111314","MESH:C567002","OMIM:611136","UMLS:C4013473"],"synonyms":[{"name":"EIG13","type":"exact"},{"name":"GABRA1 juvenile myoclonic epilepsy","type":"related"},{"name":"epilepsy, childhood absence, susceptibility to, 4","type":"related"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 13","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 13","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to, 5","type":"related"},{"name":"juvenile myoclonic epilepsy caused by mutation in GABRA1","type":"related"},{"name":"susceptibility to idiopathic generalised epilepsy 13","type":"exact"},{"name":"susceptibility to idiopathic generalized epilepsy 13","type":"exact"}],"termid":"MONDO:0012627","xrefs":{"Monarch":{"xref_id":"0012627"}}}


id: PBO:0070955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 10","termid":"PBO:0070955"}


id: PBO:0063675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 4","termid":"PBO:0063675"}


id: PBO:0039394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMZ2 pseudogene 3","termid":"PBO:0039394"}


id: MONDO:0010388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rolandic epilepsy-speech dyspraxia syndrome","termid":"MONDO:0015587"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"rolandic epilepsy, intellectual disability, and speech dyspraxia, X-linked","secondary_identifiers":["UMLS:C1845070","MEDGEN:337150","GARD:18282","MESH:C564467","OMIM:300643"],"synonyms":[{"name":"RESDX","type":"related"},{"name":"ROLANDIC epilepsy, intellectual disability, and speech dyspraxia, X-linked","type":"related"},{"name":"ROLANDIC epilepsy, mental retardation, and speech dyspraxia, X-linked","type":"related"},{"name":"rolandic epilepsy, impaired intellectual development, and speech dyspraxia","type":"exact"},{"name":"rolandic epilepsy, intellectual disability, and speech dyspraxia, X-linked","type":"exact"},{"name":"rolandic epilepsy, mental retardation, and speech dyspraxia, X-linked","type":"exact"}],"termid":"MONDO:0010388","xrefs":{"Monarch":{"xref_id":"0010388"}}}


id: PBO:0059714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 22","termid":"PBO:0059714"}


id: PBO:0027178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_cortical_patches_present_in_increased_numbers_at_cell_tip_during_early_mitosis","termid":"PBO:0027178"}


id: GO:0007500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell fate determination","synonyms":[{"name":"mesoderm cell fate determination","type":"exact"}],"termid":"GO:0007500"}


id: GO:0102841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:1-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:11607123"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:2-monogalactosyldiacylglycerol synthase activity (obsolete GO:0102841)","termid":"GO:0102841"}


id: PBO:0062978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPN1 like, cytoplasmic","termid":"PBO:0062978"}


id: PR:P36599
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cgs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-cyclic-nucleotide phosphodiesterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.09c","synonyms":[{"name":"PDEase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cgs2","type":"exact"}],"termid":"PR:P36599"}


id: MONDO:0011263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia and progressive central nervous system degeneration, lethal","secondary_identifiers":["MEDGEN:400685","UMLS:C1865117","OMIM:602613","MESH:C566514"],"synonyms":[{"name":"skeletal dysplasia and progressive central nervous system degeneration, lethal","type":"exact"}],"termid":"MONDO:0011263","xrefs":{"Monarch":{"xref_id":"0011263"}}}


id: SO:0000467
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene sequence where the resulting protein is regulated by the stability of the resulting protein.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post_translationally_regulated","termid":"SO:0000130"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post_translationally_regulated_by_protein_stability","synonyms":[{"name":"post translationally regulated by protein stability","type":"exact"},{"name":"post-translationally regulated by protein stability","type":"exact"}],"termid":"SO:0000467"}


id: MONDO:0020150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete obsolete rare palpebral, lacrimal system and conjunctival disease (obsolete MONDO:0020150)","secondary_identifiers":["Orphanet:98559"],"termid":"MONDO:0020150","xrefs":{"Monarch":{"xref_id":"0020150"}}}


id: MONDO:0020535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"House allergic alveolitis is a hypersensitivity pneumonitis resulting from the inhalation of an antigen to which an individual has been previously sensitized in his/her domestic environment. House allergic alveolitis encompasses summer hypersensitivity pneumonitis, humidifier-induced lung diseases, hot tub lung and legionellosis.","definition_xrefs":["Orphanet:99907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"house allergic alveolitis","secondary_identifiers":["UMLS:C4511048","icd11.foundation:1985023223","MEDGEN:1387737","SCTID:725415009","GARD:19703"],"termid":"MONDO:0020535","xrefs":{"Monarch":{"xref_id":"0020535"}}}


id: FYPO:0004110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during exit from mitosis is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during exit from mitosis","synonyms":[{"name":"normal protein accumulation during exit from mitosis","type":"related"},{"name":"normal protein level during exit from mitosis during vegetative growth","type":"exact"},{"name":"normal protein level during mitosis to G1 transition","type":"exact"},{"name":"normal protein level during mitotic exit","type":"exact"}],"termid":"FYPO:0004110"}


id: GO:1904614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biphenyl stimulus.","definition_xrefs":["GO_REF:0000071","PMID:23196670","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to biphenyl","termid":"GO:1904614"}


id: MONDO:0015652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chromosomal anomaly with epilepsy as a major feature (obsolete MONDO:0015652)","secondary_identifiers":["Orphanet:166469"],"termid":"MONDO:0015652","xrefs":{"Monarch":{"xref_id":"0015652"}}}


id: GO:1901682
data:
  {"annotated_genes":["SJAG_04325","SJAG_02962","SJAG_03577","SJAG_04673","SJAG_02463","SJAG_00671","SJAG_01589","SJAG_00835","SJAG_01660","SJAG_02780","SJAG_01941","SJAG_02779","SJAG_03452","SJAG_03652","SJAG_04295","SJAG_01890","SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[100849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[106169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[71341,91570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[90344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[113134,118443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[112580,95029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034634"},{"annotations":[100170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[102095,87784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000095"},{"annotations":[109579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"},{"annotations":[87933,99839,116066,109580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015116"},{"annotations":[103124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[89665,89664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"},{"annotations":[87934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015117"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a sulfur compound from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_00835":null,"SJAG_01589":null,"SJAG_01660":null,"SJAG_01890":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03577":null,"SJAG_03652":null,"SJAG_04295":null,"SJAG_04325":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sulfur compound transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sulfur molecular entity transmembrane transporter activity","type":"exact"}],"termid":"GO:1901682","terms_by_termid":{"GO:0000095":null,"GO:0008271":null,"GO:0008521":null,"GO:0015116":null,"GO:0015117":null,"GO:0015225":null,"GO:0015228":null,"GO:0015234":null,"GO:0033229":null,"GO:0034216":null,"GO:0034634":null,"GO:0046964":null,"GO:0090422":null,"GO:1902557":null}}


id: PBO:0071613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 31","termid":"PBO:0071613"}


id: PBO:0004649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb4","termid":"PBO:0004649"}


id: PR:Q09668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L22-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.15","secondary_identifiers":["UniProtKB:Q09668"],"synonyms":[{"name":"Spom972h-RPL22L1","type":"exact"}],"termid":"PR:Q09668"}


id: PBO:0078607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 61","termid":"PBO:0078607"}


id: MONDO:0000183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertrophic osteoarthropathy, primary (obsolete MONDO:0000183)","termid":"MONDO:0000183","xrefs":{"Monarch":{"xref_id":"0000183"}}}


id: PBO:0005678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchored cell surface protein involved in ascospore wall assembly Meu10","termid":"PBO:0005678"}


id: PBO:0045227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C15","termid":"PBO:0045227"}


id: PBO:0005703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-NF-X1 zinc finger","termid":"PBO:0005703"}


id: SO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base in the start codon is changed, but the start remains.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"initiator_codon_variant","termid":"SO:0001582"},{"relation_name":"is_a","term_name":"synonymous_variant","termid":"SO:0001819"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start_retained_variant","synonyms":[{"name":"snpEff:SYNONYMOUS_START","type":"exact"}],"termid":"SO:0002019"}


id: MONDO:0001581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tolosa-hunt syndrome (obsolete MONDO:0001581)","termid":"MONDO:0001581","xrefs":{"Monarch":{"xref_id":"0001581"}}}


id: null:local:computer file
data:
  {"annotation_feature_type":"gene","cv_name":"null","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"computer file","termid":"null:local:computer file"}


id: PBO:0113105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair methyltransferase (6-O-methylguanine-DNA methylase); involved in protection against DNA alkylation damage; localizes to the peroxisome in a Pex5p-dependent manner","termid":"PBO:0113105"}


id: PBO:0030813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_isocitrate_dehydrogenase_(NAD+)_activity","termid":"PBO:0030813"}


id: PBO:0077106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 10","termid":"PBO:0077106"}


id: PBO:0066655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIO kinase 3","termid":"PBO:0066655"}


id: PBO:0074532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA F","termid":"PBO:0074532"}


id: MONDO:0018549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete late-onset scapuloperoneal muscular dystrophy with hyaline bodies (obsolete MONDO:0018549)","secondary_identifiers":["Orphanet:431263"],"synonyms":[{"name":"late-onset SPMD with hyaline bodies","type":"exact"},{"name":"late-onset scapuloperoneal syndrome, myopathic type","type":"exact"}],"termid":"MONDO:0018549","xrefs":{"Monarch":{"xref_id":"0018549"}}}


id: GO:1990585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hydroxy-L-prolyl-[protein] + UDP-beta-L-arabinofuranose = H+ + O-(beta-L-arabinofuranosyl)-trans-4-hydroxy-L-prolyl-[protein] + UDP.","definition_xrefs":["RHEA:49472","PMID:24036508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxyproline O-arabinosyltransferase activity","secondary_identifiers":["EC:2.4.2.58","MetaCyc:RXN-15011"],"synonyms":[{"name":"HPAT","type":"exact"}],"termid":"GO:1990585"}


id: MONDO:0011874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal ichthyosis-sclerosing cholangitis (NISCH syndrome) is a very rare complex ichthyosis syndrome characterized by scalp hypotrichosis, scarring alopecia, ichthyosis and sclerosing cholangitis.","definition_xrefs":["Orphanet:59303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"},{"relation_name":"is_a","term_name":"sclerosing cholangitis","termid":"MONDO:0018646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"neonatal ichthyosis-sclerosing cholangitis syndrome","secondary_identifiers":["UMLS:C1843355","MESH:C564365","MEDGEN:334382","GARD:10583","OMIM:607626","SCTID:724278007"],"synonyms":[{"name":"IHSC","type":"exact"},{"name":"ILVASC","type":"related"},{"name":"Ilvasc","type":"related"},{"name":"NISCH syndrome","type":"exact"},{"name":"Nisch syndrome","type":"related"},{"name":"ichthyosis, leukocyte vacuoles, alopecia, and sclerosing cholangitis","type":"related"},{"name":"ichthyosis-hypotrichosis-sclerosing cholangitis syndrome","type":"exact"},{"name":"ichthyosis-sclerosing cholangitis syndrome","type":"related"},{"name":"neonatal ichthyosis-sclerosing cholangitis syndrome","type":"exact"}],"termid":"MONDO:0011874","xrefs":{"Monarch":{"xref_id":"0011874"}}}


id: PBO:0057839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3155a","termid":"PBO:0057839"}


id: GO:0021611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the facial nerve. This process pertains to the initial formation of a structure from unspecified parts. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","ISBN:0838580343","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"facial nerve morphogenesis","termid":"GO:0021610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nerve formation","synonyms":[{"name":"CN VII biosynthesis","type":"related"},{"name":"CN VII formation","type":"related"}],"termid":"GO:0021611"}


id: MONDO:0956966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma non-WNT/non-SHH that is characterized as a molecular subtype by absent TP53 mutations and MYC amplifications that may be present.","definition_xrefs":["DOID:0080707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma non-WNT/non-SHH","termid":"MONDO:0850198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma non-WNT/non-SHH group 3","secondary_identifiers":["UMLS:C4330665","MEDGEN:1389944"],"termid":"MONDO:0956966","xrefs":{"Monarch":{"xref_id":"0956966"}}}


id: MONDO:0004963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute lymphoblastic leukemia of T-cell origin. It comprises about 15% of childhood cases and 25% of adult cases. It is more common in males than females. (WHO, 2001)","definition_xrefs":["NCIT:C3183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"T-cell leukemia","termid":"MONDO:0005525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"T-cell acute lymphoblastic leukemia","secondary_identifiers":["SCTID:110007008","CSP:2004-1600","CSP:2004-1803","EFO:0000209","MEDGEN:368378","SCTID:277575008","UMLS:C1961099","HGNC:5056","DOID:5603","ICDO:9837/3","NANDO:2200003"],"synonyms":[{"name":"T acute lymphoblastic leukaemia","type":"exact"},{"name":"T acute lymphoblastic leukemia","type":"exact"},{"name":"T-ALL","type":"exact"},{"name":"T-cell ALL","type":"exact"},{"name":"T-cell acute lymphoblastic leukaemia","type":"exact"},{"name":"T-cell acute lymphoblastic leukemia","type":"exact"},{"name":"T-cell acute lymphocytic leukaemia","type":"exact"},{"name":"T-cell acute lymphocytic leukemia","type":"exact"},{"name":"T-cell type acute leukaemia","type":"exact"},{"name":"T-cell type acute leukemia","type":"exact"},{"name":"acute T cell leukaemia","type":"broad"},{"name":"acute T cell leukemia","type":"exact"},{"name":"acute T cell lymphoblastic leukaemia","type":"exact"},{"name":"acute T cell lymphoblastic leukemia","type":"exact"},{"name":"acute T cell lymphocytic leukaemia","type":"exact"},{"name":"acute T cell lymphocytic leukemia","type":"exact"},{"name":"acute T-cell leukaemia","type":"exact"},{"name":"acute T-cell leukemia","type":"exact"},{"name":"acute T-cell lymphoblastic leukaemia","type":"exact"},{"name":"acute T-cell lymphoblastic leukemia","type":"exact"},{"name":"acute T-cell lymphocytic leukaemia","type":"exact"},{"name":"acute T-cell lymphocytic leukemia","type":"exact"},{"name":"precursor T lymphoblastic leukaemia","type":"exact"},{"name":"precursor T lymphoblastic leukemia","type":"exact"},{"name":"precursor T-lymphoblastic leukaemia","type":"exact"},{"name":"precursor T-lymphoblastic leukaemia (T-cell ALL)","type":"exact"},{"name":"precursor T-lymphoblastic leukemia","type":"exact"},{"name":"precursor T-lymphoblastic leukemia (T-cell ALL)","type":"exact"}],"termid":"MONDO:0004963","xrefs":{"Monarch":{"xref_id":"0004963"}}}


id: PBO:0086641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YNL146W is not an essential gene","termid":"PBO:0086641"}


id: PBO:0110045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM5 pseudogene 1","termid":"PBO:0110045"}


id: PBO:0061575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 6 gamma (pseudogene)","termid":"PBO:0061575"}


id: FYPO:0003197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to copper ion starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to copper ion starvation","termid":"FYPO:0006208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"altered RNA level during cellular response to copper ion starvation during vegetative growth","synonyms":[{"name":"abnormal RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during cellular response to copper ion starvation during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to copper starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during copper starvation during vegetative growth","type":"exact"},{"name":"altered cellular RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"altered transcript level during cellular response to copper ion starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003197"}


id: FYPO:0006740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is increased.","definition_xrefs":["PMID:30134042","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at promoter","termid":"FYPO:0007506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin at MCB promoters during vegetative growth","synonyms":[{"name":"increased protein localisation to chromatin at MCB promoters during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at MCB promoters during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at MCB target genes during vegetative growth","type":"related"},{"name":"increased protein localization to chromatin at MCB-containing promoters during vegetative growth","type":"exact"}],"termid":"FYPO:0006740"}


id: PBO:0087655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HIR complex; a nucleosome assembly complex involved in regulation of histone gene transcription; involved in position-dependent gene silencing and nucleosome reassembly; ortholog of human CABIN1 protein","termid":"PBO:0087655"}


id: FYPO:0007297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more SRE elements occurs to a greater extent than normal.","definition_xrefs":["PMID:32053662","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription from SRE promoter","synonyms":[{"name":"expression of SRE target genes increased","type":"related"},{"name":"increased transcription from SRE promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from SRE promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0007297"}


id: PBO:0065137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKX antisense RNA 1","termid":"PBO:0065137"}


id: MONDO:0010921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermoid cyst that involves the nose.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal disorder","termid":"MONDO:0002436"},{"relation_name":"is_a","term_name":"facial dermoid cyst","termid":"MONDO:0015380"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal dermoid cyst","secondary_identifiers":["OMIM:600679","MEDGEN:371575","Orphanet:141103","MESH:C563455","UMLS:C1833473","GARD:16970"],"synonyms":[{"name":"dermoid cysts, familial frontonasal","type":"related"},{"name":"nasal dermoid sinus cyst","type":"exact"}],"termid":"MONDO:0010921","xrefs":{"Monarch":{"xref_id":"0010921"}}}


id: PBO:0031354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nystatin","termid":"PBO:0031354"}


id: PBO:0062182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 3B pseudogene","termid":"PBO:0062182"}


id: GO:0016987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Sigma factors act as the promoter specificity subunit of eubacterial and plant plastid multisubunit RNA polymerases, whose core subunit composition is often described as alpha(2)-beta-beta-prime. Although sigma does not bind DNA on its own, when combined with the core to form the holoenzyme, the sigma factor binds specifically to promoter elements. The sigma subunit is released once elongation begins.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003700","GO:0140110"],"is_obsolete":false,"name":"sigma factor activity","secondary_identifiers":["GO:0001053","GO:0000996"],"synonyms":[{"name":"DNA-dependent RNA polymerase promoter selection factor","type":"exact"},{"name":"bacterial sigma factor activity","type":"narrow"},{"name":"core DNA-dependent RNA polymerase binding promoter specificity activity","type":"exact"},{"name":"plastid sigma factor activity","type":"narrow"},{"name":"promoter selection factor activity","type":"narrow"},{"name":"sigma transcription factor","type":"exact"}],"termid":"GO:0016987"}


id: PBO:0012272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 1 (predicted)","termid":"PBO:0012272"}


id: GO:0009280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. In Gram-negative bacteria the membrane that separates the cytoplasm from the murein sacculus.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall inner membrane (obsolete GO:0009280)","synonyms":[{"name":"cell wall inner membrane","type":"exact"},{"name":"cytoplasmic membrane","type":"broad"}],"termid":"GO:0009280"}


id: PR:Q9Y822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L16, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.03c","synonyms":[{"name":"Spom972h-mrpl16","type":"exact"}],"termid":"PR:Q9Y822"}


id: MONDO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving gluten.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete gluten allergy (obsolete MONDO:0000606)","secondary_identifiers":["DOID:0060057"],"synonyms":[{"name":"allergy of gluten","type":"exact"},{"name":"allergy to gluten","type":"exact"},{"name":"gluten allergic disease","type":"exact"},{"name":"gluten allergic reaction","type":"exact"}],"termid":"MONDO:0000606","xrefs":{"Monarch":{"xref_id":"0000606"}}}


id: PBO:0057866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3177","termid":"PBO:0057866"}


id: PBO:0040304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase secretory pathway Ca2+ transporting 2","termid":"PBO:0040304"}


id: PBO:0051452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-45","termid":"PBO:0051452"}


id: GO:0004729
data:
  {"annotated_genes":["SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91854],"is_not":false,"summary":null,"term":"GO:0004729"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 O2 + protoporphyrinogen IX = 3 H2O2 + protoporphyrin IX.","definition_xrefs":["RHEA:25576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"},{"relation_name":"is_a","term_name":"protoporphyrinogen oxidase activity","termid":"GO:0070818"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxygen-dependent protoporphyrinogen oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03222","MetaCyc:PROTOPORGENOXI-RXN","Reactome:R-HSA-189423","EC:1.3.3.4"],"synonyms":[{"name":"protoporphyrinogen-IX:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0004729","terms_by_termid":{"GO:0004729":null}}


id: GO:0003293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an endocardial cushion cell give rise to a cell that is part of a heart valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"part_of","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve cell differentiation","termid":"GO:0003293"}


id: FYPO:0003410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a larger portion of the centromeric region of the chromosome than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PMID:24710126","PomBase:mah","PomBase:vw","GO:0034080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"increased spatial extent of CENP-A containing chromatin assembly","synonyms":[{"name":"CENP-A containing nucleosome spreading","type":"related"},{"name":"increased extent of CENP-A containing nucleosome","type":"related"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly","type":"related"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"increased spatial extent of CENP-A deposition","type":"related"},{"name":"increased spatial extent of CENP-A loading","type":"related"},{"name":"increased spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"increased spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"increased spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"increased spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"increased spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0003410"}


id: MONDO:0006006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated squamous cell carcinoma characterized by a papillary growth pattern, acanthosis, mild cytologic atypia, and pushing tumor margins. The most commonly affected anatomic sites are the oral cavity, nasal cavity, larynx, esophagus, anus, vagina, vulva, and the plantar region of the foot.","definition_xrefs":["NCIT:C3781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary squamous carcinoma","termid":"MONDO:0002979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"verrucous carcinoma","secondary_identifiers":["EFO:0007535","SCTID:403904009","MEDGEN:60213","ICDO:8051/3","MESH:D018289","UMLS:C0206706","ICD9:199.1","DOID:3737"],"synonyms":[{"name":"verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma NOS (morphologic abnormality)","type":"exact"},{"name":"verrucous epidermoid carcinoma","type":"exact"},{"name":"verrucous epidermoid cell carcinoma","type":"exact"},{"name":"verrucous squamous carcinoma","type":"exact"},{"name":"verrucous squamous cell carcinoma","type":"exact"},{"name":"warty carcinoma","type":"related"}],"termid":"MONDO:0006006","xrefs":{"Monarch":{"xref_id":"0006006"}}}


id: PBO:0066088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 2","termid":"PBO:0066088"}


id: PBO:0047009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A12, pseudogene","termid":"PBO:0047009"}


id: PBO:0072400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 5","termid":"PBO:0072400"}


id: _global:assayed_substrate
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a catalytic activity phenotype and a substrate, such as a gene product, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_substrate","termid":"_global:assayed_substrate"}


id: PBO:0086676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RDN5-4; YLR157C-C has a paralog, YLR154C-H, that arose from a segmental duplication","termid":"PBO:0086676"}


id: GO:0141097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription activator activity regulated by binding to a ligand and that activates the transcription of specific genes and gene sets.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription activator activity","termid":"GO:0001216"},{"relation_name":"is_a","term_name":"ligand-modulated transcription factor activity","termid":"GO:0098531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0001216"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0001216","GO:0003700","GO:0003674","GO:0140110"],"is_obsolete":false,"name":"ligand-modulated transcription activator activity","synonyms":[{"name":"ligand-activated transcription activator activity","type":"narrow"}],"termid":"GO:0141097"}


id: PBO:0038580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of basal transcription 1 pseudogene 1","termid":"PBO:0038580"}


id: GO:0003132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from mesodermal cells to endodermal cells that contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal-endodermal cell signaling","termid":"GO:0003131"},{"relation_name":"part_of","term_name":"heart induction","termid":"GO:0003129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesodermal-endodermal cell signaling involved in heart induction","synonyms":[{"name":"mesodermal-endodermal cell signalling involved in heart induction","type":"exact"}],"termid":"GO:0003132"}


id: MONDO:1011873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal vacuolar disorder, non-human animal","secondary_identifiers":["OMIA:001303"],"termid":"MONDO:1011873","xrefs":{"Monarch":{"xref_id":"1011873"}}}


id: GO:0009887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis of an animal organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:go_curators","GOC:dgh","ISBN:0471245208","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ morphogenesis","synonyms":[{"name":"histogenesis and organogenesis","type":"broad"}],"termid":"GO:0009887"}


id: PBO:0090973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tat binding protein 1(TBP-1)-interacting protein (TBPIP) homolog","termid":"PBO:0090973"}


id: PBO:0040221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATCAY kinesin light chain interacting caytaxin","termid":"PBO:0040221"}


id: PBO:0073534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like, endophilin B2","termid":"PBO:0073534"}


id: SO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region which is intended for use in an experiment.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biomaterial_region","synonyms":[{"name":"biomaterial region","type":"exact"}],"termid":"SO:0001409"}


id: PBO:0027785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation","termid":"PBO:0027785"}


id: GO:0051732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NTP + 5'-dephospho-RNA = NDP + 5'-phospho-RNA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete polyribonucleotide kinase activity (obsolete GO:0051732)","synonyms":[{"name":"5'-hydroxyl RNA kinase activity","type":"exact"},{"name":"5'-hydroxyl polyribonucleotide kinase activity","type":"exact"},{"name":"RNA 5'-hydroxyl kinase activity","type":"exact"},{"name":"RNA kinase activity","type":"exact"}],"termid":"GO:0051732"}


id: PR:Q92366
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12884:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.01","secondary_identifiers":["UniProtKB:Q92366"],"synonyms":[{"name":"L43 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC776.01","type":"related"},{"name":"Spom972h-RPL29","type":"exact"}],"termid":"PR:Q92366"}


id: PBO:0038905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor D2","termid":"PBO:0038905"}


id: GO:0035265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function.","definition_xrefs":["ISBN:0471245208","ISBN:0721662544","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ growth","termid":"GO:0035265"}


id: GO:1905933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell fate determination.","definition_xrefs":["GOC:bhm","GOC:TermGenie","GO_REF:0000058","PMID:25793578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell fate determination","termid":"GO:1905933"}


id: MOD:01311
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a lysine N6-hydrogen with a quaternary amine reagent heavy (+3amu) form group.","definition_xrefs":["PubMed:11857757","Unimod:61#K","PubMed:11698400","PubMed:11914093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+3amu) N6-L-lysine","synonyms":[{"name":"GIST-Quat:2H(3)","type":"related"},{"name":"Quaternary amine labeling reagent heavy (+3amu) form, N-term & K","type":"related"}],"termid":"MOD:01311"}


id: GO:0003141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands that contributes to lateral mesoderm left/right asymmetry determination.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:0003141)","synonyms":[{"name":"TGF-beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"TGF-beta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"TGFbeta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"TGFbeta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:0003141"}


id: FYPO:0003805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing one or more non-fermentable substance(s) as the only carbon source(s).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0005447","FYPO:0001985","FYPO:0002060","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth on non-fermentable carbon source","synonyms":[{"name":"decreased growth on non-fermentable carbon source","type":"broad"},{"name":"decreased vegetative cell growth on non-fermentable carbon source","type":"exact"},{"name":"reduced cell growth on non-fermentable carbon source","type":"exact"},{"name":"slow cell growth on gluconate carbon source","type":"narrow"}],"termid":"FYPO:0003805"}


id: GO:0044589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pectin.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonan binding","termid":"GO:0048028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pectin binding","termid":"GO:0044589"}


id: FYPO:0000021
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118553,118547,118579,118542],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03453":null},"genotype_count":4,"genotypes_by_uniquename":{"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"spheroid vegetative cell","references_by_uniquename":{"PMID:29566183":null},"single_locus_annotated_genes":["SJAG_00514","SJAG_02819","SJAG_01794","SJAG_03453"],"single_locus_genotype_uniquenames":["scd1delta","ras1delta","efc25delta","scd2delta"],"synonyms":[{"name":"cell morphology, round vegetative cell","type":"related"},{"name":"cell morphology, rounded vegetative cell","type":"related"},{"name":"rounded vegetative cell","type":"exact"},{"name":"spheroid cell during vegetative growth","type":"exact"},{"name":"spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000021","terms_by_termid":{"FYECO:0000137":null,"FYPO:0002380":null}}


id: PBO:0030382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_extent_of_cell_population_growth","termid":"PBO:0030382"}


id: GO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus during an immune response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:9185563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin production","termid":"GO:0002377"},{"relation_name":"part_of","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"immunoglobulin production involved in immunoglobulin-mediated immune response","secondary_identifiers":["GO:0002379","GO:0002380"],"synonyms":[{"name":"antibody production during immune response","type":"related"},{"name":"antibody secretion during immune response","type":"related"},{"name":"immunoglobulin biosynthetic process involved in immune response","type":"narrow"},{"name":"immunoglobulin production during immune response","type":"related"},{"name":"immunoglobulin production involved in immune response","type":"related"},{"name":"immunoglobulin production involved in immunoglobulin mediated immune response","type":"exact"},{"name":"immunoglobulin secretion involved in immune response","type":"narrow"}],"termid":"GO:0002381"}


id: PBO:0084848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homologous to bacterial L35 and human MRPL35 ribosomal proteins","termid":"PBO:0084848"}


id: PBO:0040630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated protein 1","termid":"PBO:0040630"}


id: PBO:0090064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine/histone N1-acetyltransferase","termid":"PBO:0090064"}


id: GO:0034552
data:
  {"annotated_genes":["SJAG_01895","SJAG_03574","SJAG_00703","SJAG_07005"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106955,112565,98750,87765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034553"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex II.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00703":null,"SJAG_01895":null,"SJAG_03574":null,"SJAG_07005":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"respiratory chain complex II assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034552","terms_by_termid":{"GO:0034553":null}}


id: PBO:0077242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 3","termid":"PBO:0077242"}


id: PBO:0067596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 759, pseudogene","termid":"PBO:0067596"}


id: PATO:0000686
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000686 absolute rate value (obsolete PATO:0000686)","termid":"PATO:0000686"}


id: PBO:0030310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_germinating_spore","termid":"PBO:0030310"}


id: PBO:0047191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 209 member A","termid":"PBO:0047191"}


id: PBO:0061671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 54","termid":"PBO:0061671"}


id: FYPO:0004981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histones measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular histone level","synonyms":[{"name":"normal cellular histone level accumulation","type":"related"},{"name":"normal cellular histone level during mitotic cell cycle","type":"related"},{"name":"normal cellular histone level during vegetative growth","type":"exact"},{"name":"normal level of histones in cell","type":"exact"}],"termid":"FYPO:0004981"}


id: PBO:0063510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDS5B divergent transcript","termid":"PBO:0063510"}


id: MONDO:0859255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"peripheral motor neuropathy, childhood-onset, biotin-responsive","secondary_identifiers":["UMLS:C5676997","OMIM:619903","MEDGEN:1809728"],"termid":"MONDO:0859255","xrefs":{"Monarch":{"xref_id":"0859255"}}}


id: PBO:0039602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member B pseudogene 3","termid":"PBO:0039602"}


id: PBO:0075460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 9","termid":"PBO:0075460"}


id: PBO:0089431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg1","termid":"PBO:0089431"}


id: GO:0009549
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microfibril composed of cellulose arranged in orthogonal layers. Cellulose is a straight chain polysaccharide composed of B(14) linked glucose subunits. It is a major component of plant cell walls. Higher plant microfibrils are about 10nm in diameter and extremely long in relation to their width. The cellulose molecules are oriented parallel to the long axis of the microfibril in a paracrystalline array, which provides great tensile strength. The microfibrils are held in place by the wall matrix and their orientation is closely controlled by the cell.","definition_xrefs":["ISBN:0943088399","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"cellulose microfibril","termid":"GO:0009549"}


id: PBO:0051379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 6-21 (non-functional)","termid":"PBO:0051379"}


id: MONDO:0001902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of agammaglobulinemia that is present from birth.","definition_xrefs":["MONDO:patterns/congenital"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"B cell deficiency","termid":"MONDO:0002211"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"congenital agammaglobulinemia","secondary_identifiers":["ICD9:279.04","UMLS:C5574711","MEDGEN:1806025","DOID:14177"],"synonyms":[{"name":"congenital agammaglobulinemia","type":"exact"},{"name":"congenital hypogammaglobulinaemia","type":"exact"},{"name":"congenital hypogammaglobulinemia (finding)","type":"exact"}],"termid":"MONDO:0001902","xrefs":{"Monarch":{"xref_id":"0001902"}}}


id: PBO:0065007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 11","termid":"PBO:0065007"}


id: PBO:0078617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 66","termid":"PBO:0078617"}


id: PBO:0076236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 6","termid":"PBO:0076236"}


id: PBO:0075030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-41","termid":"PBO:0075030"}


id: GO:1900001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anthocyanin catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of anthocyanin metabolic process","termid":"GO:0031538"},{"relation_name":"is_a","term_name":"regulation of anthocyanin catabolic process","termid":"GO:1900000"},{"relation_name":"negatively_regulates","term_name":"anthocyanin-containing compound catabolic process","termid":"GO:0046284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anthocyanin catabolic process","synonyms":[{"name":"down regulation of anthocyanin breakdown","type":"exact"},{"name":"down regulation of anthocyanin catabolic process","type":"related"},{"name":"down regulation of anthocyanin catabolism","type":"exact"},{"name":"down regulation of anthocyanin degradation","type":"exact"},{"name":"negative regulation of anthocyanin breakdown","type":"exact"},{"name":"negative regulation of anthocyanin catabolism","type":"exact"},{"name":"negative regulation of anthocyanin degradation","type":"exact"}],"termid":"GO:1900001"}


id: PBO:0074617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 17B","termid":"PBO:0074617"}


id: GO:0045819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycogen catabolic process","termid":"GO:0005981"},{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of glycogen metabolic process","termid":"GO:0070875"},{"relation_name":"positively_regulates","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glycogen catabolic process","synonyms":[{"name":"activation of glycogen catabolic process","type":"narrow"},{"name":"positive regulation of glycogen breakdown","type":"exact"},{"name":"positive regulation of glycogen catabolism","type":"exact"},{"name":"positive regulation of glycogen degradation","type":"exact"},{"name":"positive regulation of glycogenolysis","type":"exact"},{"name":"stimulation of glycogen catabolic process","type":"narrow"},{"name":"up regulation of glycogen catabolic process","type":"exact"},{"name":"up-regulation of glycogen catabolic process","type":"exact"},{"name":"upregulation of glycogen catabolic process","type":"exact"}],"termid":"GO:0045819"}


id: MONDO:0019855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Athyreosis is a form of thyroid dysgenesis characterized by complete absence of thyroid tissue that results in primary congenital hypothyroidism, a permanent thyroid deficiency that is present from birth.","definition_xrefs":["Orphanet:95713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized resistance to thyroid hormone","termid":"MONDO:0009043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"athyreosis","secondary_identifiers":["UMLS:C0749420","MEDGEN:155447","NANDO:2200331","GARD:16842"],"termid":"MONDO:0019855","xrefs":{"Monarch":{"xref_id":"0019855"}}}


id: PBO:0001181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L1 (predicted)","termid":"PBO:0001181"}


id: PR:C6Y4D3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl1 gene.","definition_xrefs":["UniProtKB:C6Y4D3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.12c","synonyms":[{"name":"Spom972h-ecl1","type":"exact"}],"termid":"PR:C6Y4D3"}


id: GO:0010056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of an atrichoblast.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell fate specification","termid":"GO:0090628"},{"relation_name":"part_of","term_name":"atrichoblast differentiation","termid":"GO:0010055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrichoblast fate specification","termid":"GO:0010056"}


id: PBO:0087175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B32; forms dissociable heterodimer with Rpb7p; Rpb4/7 dissociates from RNAPII as Ser2 CTD phosphorylation increases; Rpb4/7 regulates cellular lifespan via mRNA decay process; involved in recruitment of 3'-end processing factors to transcribing RNAPII complex, export of mRNA to cytoplasm under stress conditions; also involved in translation initiation","termid":"PBO:0087175"}


id: FYPO:0006093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other property of a microfilament motor activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microfilament motor activity","synonyms":[{"name":"abnormal actin filament motor activity","type":"exact"},{"name":"abnormal microfilament motor (ATPase) activity","type":"exact"},{"name":"abnormal myosin ATPase activity","type":"related"}],"termid":"FYPO:0006093"}


id: MONDO:1012964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy, non-human animal","termid":"MONDO:1010239"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, non-human animal","termid":"MONDO:1012964","xrefs":{"Monarch":{"xref_id":"1012964"}}}


id: SO:0000318
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"First codon to be translated by a ribosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start_codon","secondary_identifiers":["http://en.wikipedia.org/wiki/Start_codon"],"synonyms":[{"name":"initiation codon","type":"exact"},{"name":"start codon","type":"exact"}],"termid":"SO:0000318"}


id: MONDO:0015676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperandrogenism due to cortisone reductase deficiency (obsolete MONDO:0015676)","termid":"MONDO:0015676","xrefs":{"Monarch":{"xref_id":"0015676"}}}


id: GO:0000245
data:
  {"annotated_genes":["SJAG_02279","SJAG_01015","SJAG_01440","SJAG_00498","SJAG_02304","SJAG_00058","SJAG_00474","SJAG_03983","SJAG_03469","SJAG_00911","SJAG_04214","SJAG_00313","SJAG_01214","SJAG_00322","SJAG_01654","SJAG_03995","SJAG_04163","SJAG_01008","SJAG_00225","SJAG_02573","SJAG_02558","SJAG_02058","SJAG_02843","SJAG_04538","SJAG_00147","SJAG_05009","SJAG_05231","SJAG_04911","SJAG_03214","SJAG_04230","SJAG_02185","SJAG_01870","SJAG_01301"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75561,92879,94841,101232,102692,104960,108226,110378,110588],"is_not":false,"summary":null,"term":"GO:0000245"},{"annotations":[117269],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[108326,100739],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000389"},{"annotations":[105347,95107,111812,91075,93505,110094,110105,102036,110080,94683,97335,112720,114690,109526,94430,102200],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[102690],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000348"},{"annotations":[73707,106409],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006376"},{"annotations":[113294,106230,111894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903241"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.","definition_xrefs":["PMID:9476892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02058":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02558":null,"SJAG_02573":null,"SJAG_02843":null,"SJAG_03214":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04230":null,"SJAG_04538":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"spliceosomal complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spliceosome assembly","type":"broad"}],"termid":"GO:0000245","terms_by_termid":{"GO:0000245":null,"GO:0000348":null,"GO:0000354":null,"GO:0000389":null,"GO:0000395":null,"GO:0006376":null,"GO:1903241":null}}


id: GO:0090022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"is_a","term_name":"regulation of neutrophil migration","termid":"GO:1902622"},{"relation_name":"regulates","term_name":"neutrophil chemotaxis","termid":"GO:0030593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil chemotaxis","termid":"GO:0090022"}


id: PBO:0042190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D2","termid":"PBO:0042190"}


id: PBO:0068149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 456","termid":"PBO:0068149"}


id: GO:0016127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sterol catabolic process","synonyms":[{"name":"sterol breakdown","type":"exact"},{"name":"sterol catabolism","type":"exact"},{"name":"sterol degradation","type":"exact"}],"termid":"GO:0016127"}


id: PBO:0110392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial nucleoid associated protein 1","termid":"PBO:0110392"}


id: PBO:0051095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 5","termid":"PBO:0051095"}


id: FYPO:0007864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to one or both poles of the meiotic spindle does not occur during the first meiotic nuclear division.","definition_xrefs":["PMID:34346498","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle pole during meiosis I","synonyms":[{"name":"abolished protein localisation to meiotic spindle pole during meiosis I","type":"exact"},{"name":"abolished protein localisation to spindle pole during meiosis I","type":"exact"},{"name":"abolished protein localization to meiosis I spindle pole","type":"exact"},{"name":"abolished protein localization to spindle pole during first meiotic nuclear division","type":"exact"},{"name":"protein localization to meiotic spindle pole during meiosis I abolished","type":"exact"}],"termid":"FYPO:0007864"}


id: PBO:0044181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin delta 1","termid":"PBO:0044181"}


id: PBO:0028947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutamate-cysteine_ligase_activity","termid":"PBO:0028947"}


id: PBO:0111807
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRI subfamily","termid":"PBO:0111807"}


id: MONDO:0700168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that affects the lip and/or oral cavity of a dog.","definition_xrefs":["NCIT:C185639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine melanoma","termid":"MONDO:0700141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine oral melanoma","termid":"MONDO:0700168","xrefs":{"Monarch":{"xref_id":"0700168"}}}


id: PBO:0040718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL9 transcription coactivator","termid":"PBO:0040718"}


id: FYPO:0000482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"},{"relation_name":"is_a","term_name":"decreased DNA recombination during vegetative growth","termid":"FYPO:0002340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic recombination","synonyms":[{"name":"decreased mitotic recombination during mitotic cell cycle","type":"related"},{"name":"decreased mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: decreased","type":"related"},{"name":"reduced mitotic recombination","type":"exact"}],"termid":"FYPO:0000482"}


id: PBO:0027459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_rotenone","termid":"PBO:0027459"}


id: PBO:0049168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 related adaptor protein 2","termid":"PBO:0049168"}


id: MONDO:0007048
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84734],"is_not":false,"summary":null,"term":"MONDO:0007048"}]},"cv_name":"mondo","definition":"A rare genetic skin keratinization disorder with an autosomal dominant mode of inheritance. It is characterized by numerous flesh-colored warty papules on the back of the hands, medial aspect of the feet, knees, and elbows.","definition_xrefs":["NCIT:C27519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acrokeratosis verruciformis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:101900","GARD:16707","EFO:1000666","Orphanet:79151","SCTID:400085009","DOID:0050606","UMLS:C0265971","ICD9:757.39","MedDRA:10069445","MEDGEN:75589"],"synonyms":[{"name":"AKV","type":"related"},{"name":"AKV of Hopf","type":"exact"},{"name":"Hopf disease","type":"exact"},{"name":"acrokeratosis verruciformis","type":"exact"},{"name":"acrokeratosis verruciformis of Hopf","type":"exact"}],"termid":"MONDO:0007048","terms_by_termid":{"MONDO:0007048":null},"xrefs":{"Monarch":{"xref_id":"0007048"}}}


id: PBO:0067879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 181","termid":"PBO:0067879"}


id: PBO:0060314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase 3","termid":"PBO:0060314"}


id: SO:0001443
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophilic amino acid encoded by the codons GGN (GGT, GGC, GGA and GGG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine","synonyms":[{"name":"G","type":"exact"},{"name":"Gly","type":"exact"}],"termid":"SO:0001443"}


id: MONDO:0012839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyogenic bacterial infection due to MyD88 deficiency is a primary immunodeficiency characterized by increased susceptibility to pyogenic bacterial infections, including invasive pneumococcal, invasive staphylococcal and pseudomonas disease.","definition_xrefs":["Orphanet:183713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pyogenic bacterial infections due to MyD88 deficiency","secondary_identifiers":["GARD:12638","MESH:C567379","icd11.foundation:444523526","NANDO:1200362","NANDO:2200763","OMIM:612260","UMLS:C2677092","MEDGEN:383023"],"synonyms":[{"name":"MYD88D","type":"exact"},{"name":"MyD88 deficiency","type":"exact"},{"name":"immunodeficiency 68","type":"exact"},{"name":"pyogenic bacterial infections, recurrent, due to MyD88 deficiency","type":"exact"},{"name":"recurrent pyogenic bacterial infections due to MyD88 deficiency","type":"exact"}],"termid":"MONDO:0012839","xrefs":{"Monarch":{"xref_id":"0012839"}}}


id: PBO:0071888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 26","termid":"PBO:0071888"}


id: PBO:0034449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Tf_body_formation","termid":"PBO:0034449"}


id: PBO:0040107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase 2","termid":"PBO:0040107"}


id: GO:0031895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a V1B vasopressin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin receptor binding","termid":"GO:0031893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"V1B vasopressin receptor binding","synonyms":[{"name":"V1B vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031895"}


id: FYECO:0000126
data:
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id: GO:0000782
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id: PBO:0070907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 15","termid":"PBO:0070907"}


id: PBO:0080481
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 1","termid":"PBO:0080481"}


id: PBO:0091149
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase non-catalytic Sm-like domain subunit Naa38","termid":"PBO:0091149"}


id: PBO:0016558
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hikeshi protein, Opi10","termid":"PBO:0016558"}


id: GO:0008863
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id: GO:0071428
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id: MONDO:0016736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system neoplasm mostly occurring in the fourth ventricle region. It is characterized by the presence of neurocytes forming pseudorosettes and astrocytes which contain Rosenthal fibers. Cytologic atypia is minimal.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rosette-forming glioneuronal tumor of fourth ventricule","secondary_identifiers":["UMLS:C4331262","DOID:0081284","GARD:13593","Orphanet:251975","MEDGEN:1377578","NCIT:C129431"],"synonyms":[{"name":"DNT of the cerebellum","type":"exact"},{"name":"RGNT","type":"exact"},{"name":"dysembryoplastic neuroepithelial tumor of cerebellum","type":"exact"},{"name":"dysembryoplastic neuroepithelial tumour of cerebellum","type":"exact"},{"name":"rosette-forming glioneuronal tumor","type":"exact"},{"name":"rosette-forming glioneuronal tumour","type":"exact"}],"termid":"MONDO:0016736","xrefs":{"Monarch":{"xref_id":"0016736"}}}


id: PBO:0041783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyphosine 2","termid":"PBO:0041783"}


id: PBO:0074017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 11","termid":"PBO:0074017"}


id: PBO:0065548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 2","termid":"PBO:0065548"}


id: MONDO:0007567
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Epstein-Barr virus insertion site 1 (obsolete MONDO:0007567)","secondary_identifiers":["OMIM:132850"],"synonyms":[{"name":"EBVS1","type":"related"},{"name":"Epstein-Barr VIRUS insertion site 1","type":"related"},{"name":"Epstein-Barr Virus insertion site type 1","type":"exact"},{"name":"Epstein-Barr Virus integration site","type":"related"},{"name":"Epstein-Barr virus insertion site 1","type":"exact"}],"termid":"MONDO:0007567","xrefs":{"Monarch":{"xref_id":"0007567"}}}


id: MONDO:0023539
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id: PBO:0001508
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxy-acid dehydratase (predicted)","termid":"PBO:0001508"}


id: GO:0052095
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id: PBO:0116405
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type ATPase, calcium transporting, P2 type, Pmc1","termid":"PBO:0116405"}


id: SO:0000043
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene created via retrotranposition of the mRNA of a functional protein-coding parent gene followed by accumulation of deleterious mutations lacking introns and promoters, often including a polyA tail.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene","termid":"SO:0000336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processed_pseudogene","synonyms":[{"name":"INSDC_feature:gene","type":"broad"},{"name":"INSDC_qualifier:processed","type":"exact"},{"name":"R psi G","type":"related"},{"name":"processed pseudogene","type":"exact"},{"name":"pseudogene by reverse transcription","type":"related"},{"name":"retropseudogene","type":"exact"}],"termid":"SO:0000043"}


id: PBO:0079295
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 12","termid":"PBO:0079295"}


id: PBO:0045257
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1 like 3","termid":"PBO:0045257"}


id: MONDO:0002409
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disease involving the auditory system.","direct_ancestors":[{"relation_name":"is_a","term_name":"human 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disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C26757","UMLS:C5848260","EFO:1001455","ICD9:388.9","DOID:2742","MEDGEN:1846617","SCTID:362966006","ICD10CM:H60-H95","SCTID:25906001"],"synonyms":[{"name":"auditory disease","type":"exact"},{"name":"auditory system disease","type":"exact"},{"name":"auditory system disease or disorder","type":"exact"},{"name":"disease of auditory system","type":"exact"},{"name":"disease or disorder of auditory system","type":"exact"},{"name":"disorder of auditory system","type":"exact"},{"name":"ear and mastoid disease","type":"exact"}],"termid":"MONDO:0002409","terms_by_termid":{"MONDO:0007424":null,"MONDO:0009479":null,"MONDO:0010378":null,"MONDO:0010577":null,"MONDO:0010799":null,"MONDO:0010915":null,"MONDO:0010933":null,"MONDO:0011067":null,"MONDO:0011350":null,"MONDO:0011480":null,"MONDO:0011568":null,"MONDO:0012091":null,"MONDO:0012196":null,"MONDO:0013386":null,"MONDO:0013471":null,"MONDO:0013489":null,"MONDO:0014237":null,"MONDO:0014594":null,"MONDO:0014603":null,"MONDO:0014853":null,"MONDO:0027048":null,"MONDO:0030058":null,"MONDO:0030719":null,"MONDO:0032639":null,"MONDO:0032740":null,"MONDO:0032749":null,"MONDO:0032761":null,"MONDO:0032762":null,"MONDO:0032911":null,"MONDO:0032917":null,"MONDO:0033199":null,"MONDO:0033258":null,"MONDO:0033668":null,"MONDO:0859524":null,"MONDO:0859525":null,"MONDO:0958277":null},"xrefs":{"Monarch":{"xref_id":"0002409"}}}


id: GO:0102512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = delphinidin 3-O-beta-D-glucoside-5-O-beta-D-glucoside betaine + vanillate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose dependent) activity (obsolete GO:0102512)","termid":"GO:0102512"}


id: GO:0043544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipoamide, the functional form of lipoic acid in which the carboxyl group is attached to protein by an amide linkage to a lysine amino group.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lipoamide binding","termid":"GO:0043544"}


id: PBO:0001080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human C17orf28 ortholog 1","termid":"PBO:0001080"}


id: PBO:0082938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic class E vacuolar protein sorting (VPS) factor; coordinates protein sorting and deubiquitination in the multivesicular body (MVB) pathway by recruiting Doa4p to endosomes","termid":"PBO:0082938"}


id: GO:0170005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of cyclic nucleotide phosphodiesterase.","definition_xrefs":["PMID:6259174","PMID:6087882","PMID:6667031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"cyclic nucleotide phosphodiesterase activator activity","termid":"GO:0170005"}


id: GO:0006189
data:
  {"annotated_genes":["SJAG_02364","SJAG_01661","SJAG_04681","SJAG_02850","SJAG_01081","SJAG_01814","SJAG_03140","SJAG_03355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97304,99071,102906,109705,109816,113949,116796,118415],"is_not":false,"summary":null,"term":"GO:0006189"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate.","definition_xrefs":["GOC:mah","ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IMP biosynthetic process","termid":"GO:0006188"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"'de novo' IMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"'de novo' IMP anabolism","type":"exact"},{"name":"'de novo' IMP biosynthesis","type":"exact"},{"name":"'de novo' IMP formation","type":"exact"},{"name":"'de novo' IMP synthesis","type":"exact"},{"name":"'de novo' purine biosynthesis","type":"broad"},{"name":"'de novo' purine biosynthetic process","type":"broad"}],"termid":"GO:0006189","terms_by_termid":{"GO:0006189":null}}


id: GO:0097032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex II, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex II biogenesis (obsolete GO:0097032)","termid":"GO:0097032"}


id: GO:0060422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a peptidyl-dipeptidase. Peptidyl-dipeptidase activity catalyzes the release of C-terminal dipeptides from a polypeptide chain.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase inhibitor activity","termid":"GO:0030414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0098772","GO:0030234","GO:0004857"],"is_obsolete":false,"name":"peptidyl-dipeptidase inhibitor activity","termid":"GO:0060422"}


id: PBO:0087186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit ABC10-alpha, found in RNA pol I, II, and III; relocalizes from nucleolus to cytoplasm upon DNA replication stress","termid":"PBO:0087186"}


id: PBO:0039428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 8","termid":"PBO:0039428"}


id: PR:O14224
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A rho GDP-dissociation inhibitor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00535","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho GDP-dissociation inhibitor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.06","secondary_identifiers":["UniProtKB:O14224"],"synonyms":[{"name":"Spom972h-ARHGDIG","type":"exact"},{"name":"rho GDI (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14224"}


id: PBO:0073664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal-induced proliferation-associated 1","termid":"PBO:0073664"}


id: PBO:0045398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 3","termid":"PBO:0045398"}


id: PBO:0078931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-3","termid":"PBO:0078931"}


id: GO:1903268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ornithine catabolic process.","definition_xrefs":["PMID:12679340","GOC:bhm","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of ornithine catabolic process","termid":"GO:1903266"},{"relation_name":"positively_regulates","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ornithine catabolic process","synonyms":[{"name":"activation of ornithine breakdown","type":"narrow"},{"name":"activation of ornithine catabolic process","type":"narrow"},{"name":"activation of ornithine catabolism","type":"narrow"},{"name":"activation of ornithine degradation","type":"narrow"},{"name":"positive regulation of ornithine breakdown","type":"exact"},{"name":"positive regulation of ornithine catabolism","type":"exact"},{"name":"positive regulation of ornithine degradation","type":"exact"},{"name":"up regulation of ornithine breakdown","type":"exact"},{"name":"up regulation of ornithine catabolic process","type":"exact"},{"name":"up regulation of ornithine catabolism","type":"exact"},{"name":"up regulation of ornithine degradation","type":"exact"},{"name":"up-regulation of ornithine breakdown","type":"exact"},{"name":"up-regulation of ornithine catabolic process","type":"exact"},{"name":"up-regulation of ornithine catabolism","type":"exact"},{"name":"up-regulation of ornithine degradation","type":"exact"},{"name":"upregulation of ornithine breakdown","type":"exact"},{"name":"upregulation of ornithine catabolic process","type":"exact"},{"name":"upregulation of ornithine catabolism","type":"exact"},{"name":"upregulation of ornithine degradation","type":"exact"}],"termid":"GO:1903268"}


id: PBO:0056459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS1 proto-oncogene like, G protein-coupled receptor","termid":"PBO:0056459"}


id: PBO:0047236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member H","termid":"PBO:0047236"}


id: GO:0072723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amitrole stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to amitrole","termid":"GO:0072722"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amitrole","synonyms":[{"name":"cellular response to 3-amino-1,2,4-triazole","type":"exact"}],"termid":"GO:0072723"}


id: PBO:0039272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase","termid":"PBO:0039272"}


id: PBO:0048676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucuronic acid epimerase","termid":"PBO:0048676"}


id: MONDO:0975753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary hemangioma","secondary_identifiers":["Orphanet:673543"],"termid":"MONDO:0975753","xrefs":{"Monarch":{"xref_id":"0975753"}}}


id: PBO:0056074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G6D","termid":"PBO:0056074"}


id: SO:0000553
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The site on an RNA transcript to which will be added adenine residues by post-transcriptional polyadenylation. The boundary between the UTR and the polyA sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"},{"relation_name":"part_of","term_name":"mature_transcript","termid":"SO:0000233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyA_site","secondary_identifiers":["SO:0001430"],"synonyms":[{"name":"INSDC_feature:polyA_site","type":"exact"},{"name":"polyA cleavage site","type":"exact"},{"name":"polyA junction","type":"exact"},{"name":"polyA site","type":"exact"},{"name":"polyA_junction","type":"exact"},{"name":"polyadenylation site","type":"related"}],"termid":"SO:0000553"}


id: PBO:0050114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 24","termid":"PBO:0050114"}


id: _global:negatively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of,_negative_effect","termid":"_global:causally_upstream_of,_negative_effect"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates","secondary_identifiers":["RO:0002212"],"termid":"_global:negatively_regulates"}


id: GO:0015041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An electron transfer flavoprotein that functions as a housekeeping protein that is synthesized only under certain specific growth conditions and receives electrons from the oxidation of specific substrates, e.g. trimethylamine, carnitine and in nitrogen fixation.","definition_xrefs":["PMID:8599534"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer flavoprotein, group II (obsolete GO:0015041)","synonyms":[{"name":"electron transfer flavoprotein, group II","type":"exact"}],"termid":"GO:0015041"}


id: GO:0010646
data:
  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id: MONDO:0700077
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo-associated multiple autoimmune disease susceptibility 6","secondary_identifiers":["OMIM:193200","UMLS:C3277701","MEDGEN:479331"],"synonyms":[{"name":"VAMAS6","type":"exact"}],"termid":"MONDO:0700077","xrefs":{"Monarch":{"xref_id":"0700077"}}}


id: GO:0120127
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of zinc ion.","definition_xrefs":["GOC:sl","PMID:24024381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to zinc ion starvation","termid":"GO:0120127"}


id: MONDO:0008131
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy plus syndrome","termid":"MONDO:0014720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"optic atrophy, hearing loss, and peripheral neuropathy, autosomal dominant","secondary_identifiers":["MESH:C563497","GARD:402","MEDGEN:331597","OMIM:165199","UMLS:C1833831"],"synonyms":[{"name":"optic atrophy, hearing loss, and peripheral neuropathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0008131","xrefs":{"Monarch":{"xref_id":"0008131"}}}


id: PBO:0031738
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mating_type_switching","termid":"PBO:0031738"}


id: PBO:0079672
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 2","termid":"PBO:0079672"}


id: PBO:0080486
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 5B1","termid":"PBO:0080486"}


id: GO:0072238
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric long nephron over time, from its formation to the mature structure. Long nephrons are associated with juxtamedullary glomeruli and extend into the inner medulla in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long nephron development","termid":"GO:0072029"},{"relation_name":"is_a","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric long nephron development","synonyms":[{"name":"metanephric juxtamedullary nephron development","type":"related"}],"termid":"GO:0072238"}


id: PBO:0061454
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 5 group A member 2","termid":"PBO:0061454"}


id: PBO:0051216
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 5-78 (pseudogene)","termid":"PBO:0051216"}


id: PATO:0000354
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000354 protein composition value (obsolete PATO:0000354)","termid":"PATO:0000354"}


id: MONDO:0021535
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade well differentiated tumor with neuroendocrine differentiation that arises from the pancreas. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal or less than 2%.","definition_xrefs":["NCIT:C95584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic neuroendocrine tumor G1","secondary_identifiers":["UMLS:C2987241","SCTID:254613007","MEDGEN:459467"],"synonyms":[{"name":"grade 1 neuroendocrine neoplasm of pancreas","type":"exact"},{"name":"pancreas NET G1","type":"exact"},{"name":"pancreas carcinoid tumor","type":"exact"},{"name":"pancreas carcinoid tumour","type":"exact"},{"name":"pancreas neuroendocrine neoplasm G1","type":"exact"},{"name":"pancreas neuroendocrine tumor, well differentiated, low grade","type":"exact"},{"name":"pancreatic NET G1","type":"exact"},{"name":"pancreatic neuroendocrine tumor G1","type":"exact"}],"termid":"MONDO:0021535","xrefs":{"Monarch":{"xref_id":"0021535"}}}


id: MONDO:0007285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cataract (disease) in which the cause of the disease is a mutation in the GJA8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"},{"relation_name":"excluded_subClassOf","term_name":"cataract - microcornea syndrome","termid":"MONDO:0015300"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 1 multiple types","secondary_identifiers":["OMIM:116200","UMLS:C1861828","DOID:0110231","GARD:15047","MEDGEN:349374","MESH:C566158"],"synonyms":[{"name":"CAE1","type":"narrow"},{"name":"CTRCT1","type":"exact"},{"name":"CZP1","type":"narrow"},{"name":"Duffy linked cataract","type":"exact"},{"name":"GJA8 cataract (disease)","type":"exact"},{"name":"cataract (disease) caused by mutation in GJA8","type":"exact"},{"name":"cataract 1, multiple types","type":"related"},{"name":"cataract 1, multiple types, with or without microcornea","type":"exact"},{"name":"cataract, Duffy-linked","type":"related"},{"name":"cataract, zonular pulverulent, 1","type":"related"},{"name":"zonular pulverulent cataract 1","type":"narrow"}],"termid":"MONDO:0007285","xrefs":{"Monarch":{"xref_id":"0007285"}}}


id: PBO:0058496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5690","termid":"PBO:0058496"}


id: PBO:0044748
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 27","termid":"PBO:0044748"}


id: GO:0047811
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-alanine + L-glutamine = gamma-L-glutamyl-D-alanine + NH4.","definition_xrefs":["RHEA:23556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"D-alanine gamma-glutamyltransferase activity","secondary_identifiers":["MetaCyc:D-ALANINE-GAMMA-GLUTAMYLTRANSFERASE-RXN","EC:2.3.2.14","KEGG_REACTION:R01149"],"synonyms":[{"name":"D-alanine g-glutamyltransferase activity","type":"exact"}],"termid":"GO:0047811"}


id: SO:0001170
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of DNA transposon that populates the genomes of protists, fungi, and animals, characterized by a unique set of proteins necessary for their transposition, including a protein-primed DNA polymerase B, retroviral integrase, cysteine protease, and ATPase. Polintons are characterized by 6-bp target site duplications, terminal-inverted repeats that are several hundred nucleotides long, and 5'-AG and TC-3' termini. Polintons exist as autonomous and nonautonomous elements.","definition_xrefs":["PMID:16537396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polinton","synonyms":[{"name":"maverick element","type":"related"}],"termid":"SO:0001170"}


id: GO:0010218
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of far red light stimulus. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mtg_far_red","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to far red light","synonyms":[{"name":"response to far red light stimulus","type":"exact"}],"termid":"GO:0010218"}


id: FYPO:0006458
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects histone modification.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone modification","termid":"FYPO:0006458"}


id: GO:0015896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nalidixic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nalidixic acid is a synthetic antibiotic that interferes with DNA gyrase and inhibits prokaryotic replication.","definition_xrefs":["PMID:12702699","PubChem_Compound:4221","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nalidixic acid transport (obsolete GO:0015896)","termid":"GO:0015896"}


id: GO:0043178
data:
  {"annotated_genes":["SJAG_03325","SJAG_03847","SJAG_02591","SJAG_03362","SJAG_04131","SJAG_00233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100806,115235,108156,103066,90118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000822"},{"annotations":[99029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030975"}]},"cv_name":"molecular_function","definition":"Binding to an alcohol, any of a class of alkyl compounds containing a hydroxyl group.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_02591":null,"SJAG_03325":null,"SJAG_03362":null,"SJAG_03847":null,"SJAG_04131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alcohol binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043178","terms_by_termid":{"GO:0000822":null,"GO:0030975":null}}


id: GO:0050988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The carboxylation of the N-terminal methionine of proteins to form the derivative N-carboxy-L-methionine.","definition_xrefs":["RESID:AA0363"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-methionine carboxylation (obsolete GO:0050988)","termid":"GO:0050988"}


id: PBO:0061248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2","termid":"PBO:0061248"}


id: GO:0030892
data:
  {"annotated_genes":["SJAG_01067","SJAG_05019","SJAG_03418","SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87323,90430,107202,116302],"is_not":false,"summary":null,"term":"GO:0030892"}]},"cv_name":"cellular_component","definition":"A cohesin complex that mediates sister chromatid cohesion during mitosis; has a subunit composition distinct from that of the meiotic cohesin complex.","definition_xrefs":["PMID:12750522","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cohesin complex","termid":"GO:0008278"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01831":null,"SJAG_03418":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mitotic cohesin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034990"],"synonyms":[{"name":"nuclear mitotic cohesin complex","type":"related"}],"termid":"GO:0030892","terms_by_termid":{"GO:0030892":null}}


id: PBO:0047124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 168 member A","termid":"PBO:0047124"}


id: PBO:0065226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 7, synaptic","termid":"PBO:0065226"}


id: GO:0106154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing flask-shaped fruiting bodies, called perithecia. In the ascomycetous fungi such as Neurospora crassa and Sordaria macrospora, these perithecia are formed in the sexual phase and they discharge ascospores through the ostiolum at the tip of the perithecial neck.","definition_xrefs":["PMID:21134480","PMID:25311923","PMID:19547974","GOC:ach","DOI:10.1007/978-3-642-00286-1_2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perithecium development","termid":"GO:0120165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perithecium formation","termid":"GO:0106154"}


id: GO:0044195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Long, dynamic tubular channels, formed by invagination of the nuclear envelope, that extend deep into the nucleoplasm. The channels have an underlying lamina and are implicated in functioning in signaling and transport.","definition_xrefs":["PMID:17959832","GOC:jl","PMID:9024685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleoplasmic reticulum","synonyms":[{"name":"nuclear channels","type":"exact"}],"termid":"GO:0044195"}


id: GO:0030426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The migrating motile tip of a growing neuron projection, where actin accumulates, and the actin cytoskeleton is the most dynamic.","definition_xrefs":["GOC:aruk","GOC:bc","ISBN:0815316194","PMID:10082468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"part_of","term_name":"distal axon","termid":"GO:0150034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone","secondary_identifiers":["Wikipedia:Growth_cone"],"termid":"GO:0030426"}


id: GO:0046523
data:
  {"annotated_genes":["SJAG_03614"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106474],"is_not":false,"summary":null,"term":"GO:0046523"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-5-thio-alpha-D-ribose 1-phosphate = S-methyl-5-thio-D-ribulose 1-phosphate.","definition_xrefs":["RHEA:19989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"S-methyl-5-thioribose-1-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1237096","Reactome:R-HSA-1299507","EC:5.3.1.23","MetaCyc:5.3.1.23-RXN","KEGG_REACTION:R04420"],"synonyms":[{"name":"1-PMTR isomerase activity","type":"related"},{"name":"1-phospho-5'-S-methylthioribose isomerase activity","type":"related"},{"name":"5-methylthio-5-deoxy-D-ribose-1-phosphate ketol-isomerase activity","type":"related"},{"name":"5-methylthioribose-1-phosphate isomerase activity","type":"exact"},{"name":"MTR-1-P isomerase activity","type":"related"},{"name":"S-methyl-5-thio-5-deoxy-D-ribose-1-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"S-methyl-5-thio-5-deoxy-D-ribose-1-phosphate ketol-isomerase activity","type":"related"},{"name":"S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"S-methyl-5-thio-alpha-D-ribose-1-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"methylthioribose 1-phosphate isomerase activity","type":"related"}],"termid":"GO:0046523","terms_by_termid":{"GO:0046523":null}}


id: SO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An open reading frame that encodes a peptide of less than 100 amino acids.","definition_xrefs":["POMBASE:mah","PMID:23970561","PMID:24705786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ORF","termid":"SO:0000236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sORF","synonyms":[{"name":"smORF","type":"exact"},{"name":"small ORF","type":"exact"}],"termid":"SO:0002028"}


id: GO:0002866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response to antigenic stimulus","termid":"GO:0002863"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"},{"relation_name":"positively_regulates","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acute inflammatory response to antigenic stimulus","synonyms":[{"name":"activation of acute inflammatory response to antigenic stimulus","type":"narrow"},{"name":"stimulation of acute inflammatory response to antigenic stimulus","type":"narrow"},{"name":"up regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"up-regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"upregulation of acute inflammatory response to antigenic stimulus","type":"exact"}],"termid":"GO:0002866"}


id: GO:1900377
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of secondary metabolite biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"negatively_regulates","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of secondary metabolite biosynthesis","type":"exact"},{"name":"down regulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"down-regulation of secondary metabolite biosynthesis","type":"exact"},{"name":"down-regulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"downregulation of secondary metabolite biosynthesis","type":"exact"},{"name":"downregulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"inhibition of secondary metabolite biosynthesis","type":"exact"},{"name":"inhibition of secondary metabolite biosynthetic process","type":"narrow"},{"name":"negative regulation of secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:1900377","terms_by_termid":{"GO:1905569":null}}


id: GO:0016582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration of DNA or protein in chromatin by the non-covalent addition or removal of chemical groups.","definition_xrefs":["GOC:jl","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete non-covalent chromatin modification (obsolete GO:0016582)","termid":"GO:0016582"}


id: GO:0007521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a muscle cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators","CL:0000187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"muscle cell fate commitment","termid":"GO:0042693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell fate determination","termid":"GO:0007521"}


id: GO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the amphibian larva over time, from its formation to the mature structure. Amphibian larvae, sometimes called pollywogs or tadpoles, hatch from eggs and begin to grow limbs and other adult physical features at various times, depending on the species, before they metamorphose into the adult form.","definition_xrefs":["GOC:bf","PMID:27143402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amphibian larval development","termid":"GO:0002117"}


id: PBO:0077919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 10","termid":"PBO:0077919"}


id: GO:0006995
data:
  {"annotated_genes":["SJAG_00256","SJAG_00781","SJAG_03309","SJAG_03256","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[103318],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901481"},{"annotations":[103321,102289],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901482"},{"annotations":[100875,87364],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nitrogen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"cellular response to nitrogen levels","termid":"GO:0043562"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00781":null,"SJAG_03256":null,"SJAG_03309":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006995","terms_by_termid":{"GO:0031142":null,"GO:1901481":null,"GO:1901482":null,"GO:1905287":null}}


id: FYPO:0004586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of caffeine and hydroxyurea. Cells stop growing (and may die) at concentrations of caffeine and hydroxyurea that allow wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:10757807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to caffeine and hydroxyurea","synonyms":[{"name":"hypersensitive to caffeine and hydroxyurea","type":"exact"},{"name":"sensitive to caffeine and HU","type":"exact"},{"name":"sensitive to caffeine and hydroxyurea during mitotic cell cycle","type":"related"},{"name":"sensitive to caffeine and hydroxyurea during vegetative growth","type":"exact"},{"name":"sensitive to caffeine and hydroxyurea in combination","type":"exact"}],"termid":"FYPO:0004586"}


id: PBO:0090102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc8","termid":"PBO:0090102"}


id: GO:1900321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltotetraose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"maltotetraose transport","termid":"GO:2001099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of maltotetraose transport","termid":"GO:1900321"}


id: PBO:0065238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 6","termid":"PBO:0065238"}


id: MONDO:0012358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"leprosy","termid":"MONDO:0005124"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leprosy, susceptibility to, 1","secondary_identifiers":["OMIM:609888","UMLS:C1835932","MEDGEN:332089"],"synonyms":[{"name":"LPRS1","type":"exact"},{"name":"leprosy, Paucibacillary type, susceptibility to, 1","type":"related"},{"name":"leprosy, paucibacillary type, susceptibility to","type":"exact"},{"name":"leprosy, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0012358","xrefs":{"Monarch":{"xref_id":"0012358"}}}


id: PBO:0064146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKNOX2 antisense RNA 1","termid":"PBO:0064146"}


id: PBO:0046815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid 2-hydroxylase","termid":"PBO:0046815"}


id: PBO:0066903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 204","termid":"PBO:0066903"}


id: FYPO:0002169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to gamma radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth during cellular response to ionizing radiation","termid":"FYPO:0004229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth during cellular response to gamma radiation","synonyms":[{"name":"normal cell population growth during cellular response to gamma irradiation","type":"exact"},{"name":"normal cell population growth during cellular response to gamma radiation","type":"exact"},{"name":"normal cell population growth in response to gamma irradiation","type":"related"},{"name":"normal cellular response to gamma radiation","type":"related"},{"name":"normal sensitivity to gamma radiation","type":"related"},{"name":"normal vegetative cell population growth during cellular response to gamma radiation","type":"exact"}],"termid":"FYPO:0002169"}


id: PR:O13688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse6 gene.","definition_xrefs":["UniProtKB:O13688","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosome element 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.08c","synonyms":[{"name":"Spom972h-nse6","type":"exact"},{"name":"core protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-SMC element 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13688"}


id: MONDO:0006454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare primary thymic carcinoma, characterized by the presence of keratinizing or non-keratinizing malignant squamous cells. Approximately 10-20% of cases occur in combination with thymoma. The prognosis depends on the tumor stage and the degree of cellular differentiation.","definition_xrefs":["NCIT:C6455"],"gene_count":0,"genotype_count":0,"name":"obsolete thymic squamous cell carcinoma (obsolete MONDO:0006454)","termid":"MONDO:0006454","xrefs":{"Monarch":{"xref_id":"0006454"}}}


id: GO:0046157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"siroheme metabolic process","termid":"GO:0046156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"siroheme catabolic process","synonyms":[{"name":"sirohaem catabolic process","type":"exact"},{"name":"sirohaem catabolism","type":"exact"},{"name":"siroheme breakdown","type":"exact"},{"name":"siroheme catabolism","type":"exact"},{"name":"siroheme degradation","type":"exact"}],"termid":"GO:0046157"}


id: PBO:0055712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMBR1 domain containing 2","termid":"PBO:0055712"}


id: GO:0044375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peroxisome size","termid":"GO:0044375"}


id: MONDO:0007170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atresia of external auditory canal and conductive deafness","secondary_identifiers":["GARD:18274","OMIM:108760","MEDGEN:502760","UMLS:C3502361"],"synonyms":[{"name":"atresia of external auditory canal and conductive deafness","type":"exact"}],"termid":"MONDO:0007170","xrefs":{"Monarch":{"xref_id":"0007170"}}}


id: MONDO:1010450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilated cardiomyopathy that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dilated cardiomyopathy, non-human animal","termid":"MONDO:1010011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilated cardiomyopathy, pig","secondary_identifiers":["OMIA:000162-9823"],"termid":"MONDO:1010450","xrefs":{"Monarch":{"xref_id":"1010450"}}}


id: PBO:0047908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(8)(q24.1)","termid":"PBO:0047908"}


id: PBO:0081958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZP3 pseudogene 2","termid":"PBO:0081958"}


id: PR:O14351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An L-xylulose reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C30D10.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.05c","secondary_identifiers":["UniProtKB:O14351"],"synonyms":[{"name":"Spom972h-DCXR","type":"exact"}],"termid":"PR:O14351"}


id: GO:0032561
data:
  {"annotated_genes":["SJAG_03453","SJAG_00968","SJAG_02331","SJAG_00983","SJAG_02302","SJAG_04862","SJAG_01456","SJAG_00118","SJAG_02366","SJAG_00231","SJAG_00663","SJAG_01215","SJAG_04387","SJAG_02292","SJAG_05030","SJAG_00457","SJAG_00044","SJAG_00424","SJAG_00360","SJAG_02848","SJAG_04410","SJAG_01929","SJAG_01277","SJAG_01789","SJAG_00031","SJAG_01438","SJAG_02520","SJAG_01696","SJAG_02180","SJAG_00801","SJAG_02509","SJAG_02353","SJAG_03688","SJAG_03374","SJAG_03188","SJAG_04375","SJAG_02374","SJAG_03072","SJAG_02656","SJAG_01534","SJAG_03371","SJAG_04509","SJAG_02604","SJAG_00906","SJAG_04366","SJAG_01909","SJAG_01558","SJAG_04940","SJAG_04003","SJAG_04666","SJAG_02684","SJAG_02384","SJAG_04351","SJAG_04233","SJAG_01851","SJAG_03342","SJAG_02171","SJAG_03915","SJAG_00840","SJAG_00414","SJAG_01774","SJAG_01769","SJAG_02605","SJAG_03732","SJAG_03275","SJAG_04470","SJAG_04874","SJAG_00430","SJAG_01339","SJAG_02595","SJAG_04343","SJAG_02824","SJAG_03684","SJAG_01379","SJAG_02233","SJAG_00226","SJAG_01449","SJAG_01358","SJAG_02601","SJAG_02444","SJAG_00466","SJAG_02856","SJAG_00344","SJAG_02640","SJAG_03846","SJAG_03137","SJAG_03959","SJAG_05332","SJAG_04004","SJAG_03461","SJAG_04157","SJAG_01391","SJAG_02661","SJAG_01695","SJAG_00659"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90367,109993,91208,91937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019003"},{"annotations":[115132,88401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019002"},{"annotations":[101259,111848,102256,93788,102142,93351,104531,106606,91494,91435,99457,88755,116938,115529,89248,95265,100781,109994,90368,116060,103406,91529,92376,92766,109216,99611,93105,102118,110293,115379,93106,108315,100456,104888,97398,92305,106904,102371,117914,118391,96570,110895,116770,92903,116939,111847,93835,93104,97887,100943,99139,106645,99215,100732,106667,89816,100153,104134,110976,115416,90808,117803,103498,108788,112314,100343,103154,97248,92956,88953,97804,104377,94011,88402,104084,105480,106896,96010,108727,109987,91938,93738,109995,106019,112975,87420,95779,117913,97805,117915,94731,108194,92217,118392,111581,107932,108166,109726,60872,90595,102980,116933,111849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005525"}]},"cv_name":"molecular_function","definition":"Binding to a guanyl ribonucleotide, any compound consisting of guanosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl nucleotide binding","termid":"GO:0019001"},{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"}],"gene_count":95,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00044":null,"SJAG_00118":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00360":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00801":null,"SJAG_00840":null,"SJAG_00906":null,"SJAG_00968":null,"SJAG_00983":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01534":null,"SJAG_01558":null,"SJAG_01695":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01789":null,"SJAG_01851":null,"SJAG_01909":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02374":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02509":null,"SJAG_02520":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02604":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02661":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03188":null,"SJAG_03275":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_03959":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04233":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04366":null,"SJAG_04375":null,"SJAG_04387":null,"SJAG_04410":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04862":null,"SJAG_04874":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"guanyl ribonucleotide binding","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0032561","terms_by_termid":{"GO:0005525":null,"GO:0019002":null,"GO:0019003":null}}


id: MOD:01991
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycinium (protonated glycine) residue to an N,N,N-trimethylglycine.","definition_xrefs":["PubMed:23818633","RESID:AA0619","PubMed:23978223","ChEBI:17750"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated glycine (glycinium) residue","termid":"MOD:01990"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated residue","termid":"MOD:01687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethylglycine (from glycinium)","synonyms":[{"name":"N2Me3Gly","type":"exact"}],"termid":"MOD:01991"}


id: GO:0021921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the frequency, rate or extent of cell proliferation in the dorsal spinal cord.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"part_of","term_name":"dorsal spinal cord development","termid":"GO:0021516"},{"relation_name":"regulates","term_name":"cell proliferation in dorsal spinal cord","termid":"GO:0010456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation in dorsal spinal cord","termid":"GO:0021921"}


id: PATO:0000329
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's being marked with irregularly shaped spots or blots of a different hue or degree of saturation.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blotchy","synonyms":[{"name":"blotched","type":"exact"}],"termid":"PATO:0000329"}


id: PBO:0000646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase family","termid":"PBO:0000646"}


id: GO:0046009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the receptiveness of a female to male advances subsequent to mating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of female receptivity","termid":"GO:0045925"},{"relation_name":"is_a","term_name":"regulation of female receptivity, post-mating","termid":"GO:0046008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female receptivity, post-mating","synonyms":[{"name":"activation of female receptivity, post-mating","type":"narrow"},{"name":"stimulation of female receptivity, post-mating","type":"narrow"},{"name":"up regulation of female receptivity, post-mating","type":"exact"},{"name":"up-regulation of female receptivity, post-mating","type":"exact"},{"name":"upregulation of female receptivity, post-mating","type":"exact"}],"termid":"GO:0046009"}


id: MONDO:0003332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ovarian mature teratoma characterized by the presence of aberrant thyroid tissue with morphologic changes identical to thyroid carcinoma. Patients may present with abdominal mass and unusual symptoms due to thyrotoxicosis, or with Meigs syndrome (ascites and pleural effusion).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma with malignant transformation","termid":"MONDO:0006444"},{"relation_name":"is_a","term_name":"struma ovarii","termid":"MONDO:0006980"},{"relation_name":"is_a","term_name":"immature ovarian teratoma","termid":"MONDO:0018369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant struma ovarii","secondary_identifiers":["UMLS:C0334525","NCIT:C4291","DOID:5208","ICDO:9090/3","MEDGEN:137777"],"synonyms":[{"name":"struma ovarii, malignant","type":"exact"},{"name":"struma ovarii, malignant (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003332","xrefs":{"Monarch":{"xref_id":"0003332"}}}


id: GO:0098840
data:
  {"annotated_genes":["SJAG_02731","SJAG_01775","SJAG_00851","SJAG_01211","SJAG_01371","SJAG_01546","SJAG_03437","SJAG_05266","SJAG_02761","SJAG_02336","SJAG_00918","SJAG_01297","SJAG_01224","SJAG_03540","SJAG_05220","SJAG_05319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[107726,103387,118102,99880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[89259,96276,109353,100012,108343,90493,116360,88655,106970,113540,98132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"The directed movement of a protein along a microtubule, mediated by motor proteins.","definition_xrefs":["PMID:25987607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"transport along microtubule","termid":"GO:0010970"},{"relation_name":"is_a","term_name":"microtubule-based protein transport","termid":"GO:0099118"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02336":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein transport along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule-based protein transport","type":"broad"}],"termid":"GO:0098840","terms_by_termid":{"GO:0099117":null,"GO:0140210":null,"GO:1990976":null}}


id: GO:1905618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of miRNA-mediated gene silencing by inhibition of translation.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GO_REF:0000058","PMID:23409027","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of miRNA-mediated gene silencing by inhibition of translation (obsolete GO:1905618)","synonyms":[{"name":"activation of down regulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of down-regulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of downregulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of gene silencing by miRNA, negative regulation of translation","type":"narrow"},{"name":"activation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of miRNA mediated inhibition of translation","type":"narrow"},{"name":"activation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"activation of negative regulation of translation involved in gene silencing by microRNA","type":"narrow"},{"name":"positive regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"positive regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"positive regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"positive regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"positive regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"positive regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"positive regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"positive regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"up regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"up regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"up regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"up regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"up regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"up-regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up-regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up-regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up-regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"up-regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"up-regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"up-regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"up-regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"upregulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"upregulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"upregulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"upregulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"upregulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"upregulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"upregulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"upregulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:1905618"}


id: PBO:0044981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHX33 divergent transcript","termid":"PBO:0044981"}


id: GO:0051245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of the cellular defense response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular defense response","termid":"GO:0010185"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"negatively_regulates","term_name":"cellular defense response","termid":"GO:0006968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular defense response","synonyms":[{"name":"down regulation of cellular defense response","type":"exact"},{"name":"down-regulation of cellular defense response","type":"exact"},{"name":"downregulation of cellular defense response","type":"exact"},{"name":"inhibition of cellular defense response","type":"narrow"},{"name":"negative regulation of cellular defence response","type":"exact"}],"termid":"GO:0051245"}


id: FYPO:0007017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA pseudouridylation, the intramolecular conversion of uridine to pseudouridine in a tRNA molecule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0031119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA modification","termid":"FYPO:0001762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal tRNA pseudouridylation","synonyms":[{"name":"normal pseudouridine level in tRNA","type":"related"},{"name":"normal tRNA pseudouridine synthesis","type":"exact"},{"name":"normal tRNA pseudouridylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA pseudouridylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007017"}


id: GO:1990438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The posttranscriptional addition a methyl group to the 2'-oxygen atom of a nucleotide residue in an U6 snRNA molecule.","definition_xrefs":["PMID:11842100","PMID:9844635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA 2'-O-methylation","termid":"GO:1990437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016073","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"U6 2'-O-snRNA methylation","termid":"GO:1990438"}


id: PR:P87155
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein unc-50 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03628","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein GMH1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.14","secondary_identifiers":["UniProtKB:P87155"],"synonyms":[{"name":"Spom972h-UNC50","type":"exact"},{"name":"meiotically up-regulated gene 16 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87155"}


id: FYPO:0004511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal and are curved, i.e. follow a smooth bend rather than a straight line, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long cytoplasmic microtubules","termid":"FYPO:0000233"},{"relation_name":"is_a","term_name":"curved interphase microtubules","termid":"FYPO:0003327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"long curved interphase microtubules","synonyms":[{"name":"elongated curved interphase microtubules","type":"exact"},{"name":"long curved cytoplasmic microtubules during interphase of mitotic cell cycle","type":"exact"},{"name":"long curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"long curved interphase cytoplasmic microtubules","type":"exact"},{"name":"long curved interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004511"}


id: PBO:0000651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX prenyl protease (predicted)","termid":"PBO:0000651"}


id: SO:0001093
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the protein molecule, interacts selectively and non-covalently with polypeptide residues.","definition_xrefs":["EBIBS:GAR","UniProt:Curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_binding_site","termid":"SO:0000410"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"protein_protein_contact","secondary_identifiers":["BS:00131","http://en.wikipedia.org/wiki/Protein_protein_interaction"],"synonyms":[{"name":"protein protein contact","type":"exact"},{"name":"protein protein contact site","type":"exact"},{"name":"protein_protein_interaction","type":"related"}],"termid":"SO:0001093"}


id: GO:0140562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyses the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-L-serine = UDP + [protein with EGF-like domain]-3-O-(beta-D-xylosyl)-L-serine.","definition_xrefs":["RHEA:62016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"EGF-domain serine xylosyltransferase activity","secondary_identifiers":["EC:2.4.2.63"],"termid":"GO:0140562"}


id: PBO:0043794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin like and PC-esterase domain containing 1","termid":"PBO:0043794"}


id: PBO:0030454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_homocitrate_synthase_activity","termid":"PBO:0030454"}


id: FYPO:0004396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which mitotic spindle elongation, i.e. the process of lengthening the distance between poles of the mitotic spindle, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000022","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle elongation","synonyms":[{"name":"normal mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"normal spindle elongation during mitosis","type":"exact"},{"name":"normal spindle elongation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004396"}


id: PBO:0030162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_phosphatidylcholine_level","termid":"PBO:0030162"}


id: PBO:0077520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 235","termid":"PBO:0077520"}


id: GO:0102291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 11alpha-hydroxy-beta-amyrin + O2 + NADPH + H+ = 11-oxo-beta-amyrin + 2 H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 11alpha-hydroxy-beta-amyrin dehydrogenase activity (obsolete GO:0102291)","termid":"GO:0102291"}


id: GO:0000452
data:
  {"annotated_genes":["SJAG_00744","SJAG_03410","SJAG_00943","SJAG_02377","SJAG_02350"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93634,98294,107556,109658,110799],"is_not":false,"summary":null,"term":"GO:0000452"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of methylation.","definition_xrefs":["ISBN:1555811337","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 2'-O-methylation","termid":"GO:0000451"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00744":null,"SJAG_00943":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_03410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"snoRNA guided rRNA 2'-O-methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snoRNA guided rRNA 2'-O-ribose methylation","type":"related"}],"termid":"GO:0000452","terms_by_termid":{"GO:0000452":null}}


id: GO:1902735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor-mediated virion attachment to host cell.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:18385238","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated virion attachment to host cell","termid":"GO:1902734"},{"relation_name":"negatively_regulates","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor-mediated virion attachment to host cell","synonyms":[{"name":"down regulation of receptor-mediated virion attachment to host cell","type":"exact"},{"name":"down regulation of virion attachment, binding of host cell surface receptor","type":"exact"},{"name":"down-regulation of receptor-mediated virion attachment to host cell","type":"exact"},{"name":"down-regulation of virion attachment, binding of host cell surface receptor","type":"exact"},{"name":"downregulation of receptor-mediated virion attachment to host cell","type":"exact"},{"name":"downregulation of virion attachment, binding of host cell surface receptor","type":"exact"},{"name":"inhibition of receptor-mediated virion attachment to host cell","type":"narrow"},{"name":"inhibition of virion attachment, binding of host cell surface receptor","type":"narrow"},{"name":"negative regulation of virion attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:1902735"}


id: MONDO:0021643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A varicose disease that involves the mesentery.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"varicose disease","termid":"MONDO:0008638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenteric varices","secondary_identifiers":["SCTID:22949006","MEDGEN:540965","UMLS:C0267791","HP:0002626"],"synonyms":[{"name":"mesentery varicose disease","type":"exact"},{"name":"varicose disease of mesentery","type":"exact"}],"termid":"MONDO:0021643","xrefs":{"Monarch":{"xref_id":"0021643"}}}


id: MONDO:0008809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Digital extensor muscle aplasia-polyneuropathy is a rare, hereditary motor and sensory neuropathy characterized by flexion deformities of the thumb and fingers, sensory deficit in the hand and polyneuropathic electrophysiologic findings in the limbs. Operation on the hands reveals extensor muscles and their tendons to be absent or hypoplastic. There have been no further descriptions in the literature since 1986.","definition_xrefs":["Orphanet:2926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy","termid":"MONDO:0015358"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy-hand defect syndrome","secondary_identifiers":["OMIM:207740","GARD:2589","MESH:C535624","UMLS:C1859752","MEDGEN:349240"],"synonyms":[{"name":"Hamanishi Ueba Tsuji syndrome","type":"exact"},{"name":"Hamanishi-Ueba-Tsuji syndrome","type":"exact"},{"name":"aplasia of extensor muscles of fingers, unilateral, with generalised polyneuropathy","type":"related"},{"name":"aplasia of extensor muscles of fingers, unilateral, with generalized polyneuropathy","type":"related"},{"name":"congenital aplasia of the extensor muscles of the fingers and thumb associated with generalised polyneuropathy","type":"related"},{"name":"congenital aplasia of the extensor muscles of the fingers and thumb associated with generalized polyneuropathy","type":"related"},{"name":"digital extensor muscle aplasia-polyneuropathy","type":"related"},{"name":"polyneuropathy, hand defect","type":"related"}],"termid":"MONDO:0008809","xrefs":{"Monarch":{"xref_id":"0008809"}}}


id: PBO:0081324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF114 antisense RNA 1","termid":"PBO:0081324"}


id: MONDO:0700161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gastrointestinal stromal tumor occurring in a dog.","definition_xrefs":["NCIT:C158783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"gastrointestinal stromal tumour, non-human animal","termid":"MONDO:1011440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine gastrointestinal stromal tumor","secondary_identifiers":["OMIA:001516-9615"],"termid":"MONDO:0700161","xrefs":{"Monarch":{"xref_id":"0700161"}}}


id: PBO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M17","termid":"PBO:0000475"}


id: GO:0032486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rap subfamily relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Rap protein signal transduction","termid":"GO:0032486"}


id: GO:0019608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["ISBN:0198547684","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nicotine metabolic process","termid":"GO:0018933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine catabolic process","secondary_identifiers":["MetaCyc:P181-PWY","UM-BBD_pathwayID:nic"],"synonyms":[{"name":"nicotine breakdown","type":"exact"},{"name":"nicotine catabolism","type":"exact"},{"name":"nicotine degradation","type":"exact"}],"termid":"GO:0019608"}


id: FYPO:0006194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is spherical, and undergoes one or two rounds of cell division before all cells die, and some cells lyse.","definition_xrefs":["PomBase:mah","PMID:12456722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, abnormal cell shape","termid":"FYPO:0002421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, spherical cell with cell lysis","synonyms":[{"name":"inviable following spore germination, single or double cell division, spherical cell with cell lysis","type":"exact"},{"name":"inviable germinated spore, single or double cell division, spherical cell with cell lysis","type":"exact"},{"name":"lethal after spore germination, single or double cell division, spherical cell with cell lysis","type":"exact"}],"termid":"FYPO:0006194"}


id: MONDO:0010562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Colonic atresia is a congenital intestinal malformation resulting in a non-latent segment of the colon and characterized by lower intestinal obstruction manifesting with abdominal distention and failure to pass meconium in newborns.","definition_xrefs":["Orphanet:1198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colonic atresia","secondary_identifiers":["MEDGEN:75605","HP:0010448","GARD:1446","UMLS:C0266190","SCTID:37054000","MESH:C562562","OMIM:303650","NCIT:C101024"],"synonyms":[{"name":"atresia of colon","type":"exact"},{"name":"colon atresia","type":"exact"},{"name":"colonic atresia","type":"exact"},{"name":"colonic atresia (disease)","type":"exact"},{"name":"congenital atresia of colon","type":"exact"}],"termid":"MONDO:0010562","xrefs":{"Monarch":{"xref_id":"0010562"}}}


id: GO:0097302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways by which diacylglyceryl transfer leads to formation of a water-soluble protein-lipid complex.","definition_xrefs":["UniPathway:UPA00664","GOC:yaf","GOC:pde"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein biosynthetic process via diacylglyceryl transfer (obsolete GO:0097302)","synonyms":[{"name":"lipoprotein biosynthesis (diacylglyceryl transfer)","type":"exact"}],"termid":"GO:0097302"}


id: PATO:0001411
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having distinct structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structured","termid":"PATO:0001411"}


id: MONDO:0018029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital factor XIII deficiency is an inherited bleeding disorder due to reduced levels and activity of factor XIII (FXIII) and characterized by hemorrhagic diathesis frequently associated with spontaneous abortions and defective wound healing. Factor XIII deficiency is one of the most rare coagulation factor deficiencies.","definition_xrefs":["Orphanet:331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor XIII deficiency","termid":"MONDO:0002241"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital factor XIII deficiency","secondary_identifiers":["ICD9:286.3","MEDGEN:4639","UMLS:C0015530","SCTID:50189006","GARD:10766","NANDO:2200681","NCIT:C131633","DOID:2211"],"synonyms":[{"name":"deficiency, Laki-Lorand factor","type":"exact"},{"name":"factor XIII deficiency","type":"related"},{"name":"factor XIII deficiency disease","type":"exact"},{"name":"fibrin stabilising factor deficiency","type":"related"},{"name":"fibrin stabilizing factor deficiency","type":"related"},{"name":"fibrin-stabilizing factor deficiency","type":"broad"},{"name":"hereditary factor XIII deficiency disease","type":"exact"}],"termid":"MONDO:0018029","xrefs":{"Monarch":{"xref_id":"0018029"}}}


id: GO:0010027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the thylakoid membrane.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"thylakoid membrane organization","synonyms":[{"name":"thylakoid membrane organisation","type":"exact"},{"name":"thylakoid membrane organization and biogenesis","type":"related"}],"termid":"GO:0010027"}


id: PBO:0079361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 3g pseudogene","termid":"PBO:0079361"}


id: MONDO:0006758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycobacterium infections of the female reproductive tract (genitalia, female).","definition_xrefs":["MESH:D014384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female genital tuberculosis","secondary_identifiers":["MEDGEN:546958","SCTID:74181004","EFO:1000935","MedDRA:10061150","UMLS:C0275931"],"termid":"MONDO:0006758","xrefs":{"Monarch":{"xref_id":"0006758"}}}


id: GO:0019853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions.","definition_xrefs":["GOC:ma","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ascorbic acid metabolic process","termid":"GO:0019852"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766","GO:0005975"],"is_obsolete":false,"name":"L-ascorbic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-882"],"synonyms":[{"name":"L-ascorbic acid anabolism","type":"exact"},{"name":"L-ascorbic acid biosynthesis","type":"exact"},{"name":"L-ascorbic acid formation","type":"exact"},{"name":"L-ascorbic acid synthesis","type":"exact"},{"name":"ascorbate biosynthesis","type":"exact"},{"name":"ascorbate biosynthetic process","type":"exact"},{"name":"vitamin C biosynthesis","type":"exact"},{"name":"vitamin C biosynthetic process","type":"exact"}],"termid":"GO:0019853"}


id: GO:0034672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the pronephros along the anterior/posterior axis to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification involved in pronephros development","synonyms":[{"name":"anterior/posterior pattern specification involved in pronephric kidney development","type":"exact"}],"termid":"GO:0034672"}


id: MOD:00367
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-sulfo-L-threonine.","definition_xrefs":["RESID:AA0362","Unimod:40#T","PubMed:14752058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 181.00-181.02 Da","termid":"MOD:00773"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-sulfo-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(sulfooxy)butanoic acid","type":"exact"},{"name":"2-amino-3-hydroxybutanoic acid 3-sulfate","type":"exact"},{"name":"MOD_RES Sulfothreonine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"O-sulfo-L-threonine","type":"exact"},{"name":"O3-sulfonothreonine","type":"exact"},{"name":"O3-sulfothreonine","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"threonine sulfate ester","type":"exact"}],"termid":"MOD:00367"}


id: PBO:0113520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase; role in proteasome-dependent degradation of aberrant nuclear proteins; targets substrates with regions of exposed hydrophobicity; contains intrinsically disordered regions involved in substrate recognition; prefers a window of exposed hydrophobicity that causes a particular level of protein insolubility, suggesting that San1p evolved to target highly aggregation-prone proteins; localizes to the cytoplasm, nucleus and peroxisomes","termid":"PBO:0113520"}


id: MONDO:0958270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central precocious puberty in male","secondary_identifiers":["MEDGEN:1853132","Orphanet:649929","UMLS:C5816736"],"termid":"MONDO:0958270","xrefs":{"Monarch":{"xref_id":"0958270"}}}


id: PBO:0061961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 25","termid":"PBO:0061961"}


id: GO:0048561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of an animal organ or tissue with reference to an axis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of anatomical structure orientation","termid":"GO:0048560"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of animal organ orientation","termid":"GO:0048561"}


id: PBO:0091449
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds S. pombe telomeric repeats with flexible sequence recognition requirements","termid":"PBO:0091449"}


id: PBO:0074052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 32","termid":"PBO:0074052"}


id: GO:0032790
data:
  {"annotated_genes":["SJAG_00188","SJAG_05000","SJAG_03232","SJAG_03428","SJAG_03106","SJAG_00898","SJAG_01497","SJAG_02096","SJAG_02746","SJAG_04283","SJAG_04862","SJAG_03189","SJAG_01074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103096,104183,110975,115477],"is_not":false,"summary":null,"term":"GO:0032790"},{"annotations":[113850],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[87433,115533,91378,105109,106335,102614,113443,98947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"}]},"cv_name":"biological_process","definition":"The disaggregation of a ribosome into its constituent components; includes the dissociation of ribosomal subunits.","definition_xrefs":["GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03106":null,"SJAG_03189":null,"SJAG_03232":null,"SJAG_03428":null,"SJAG_04283":null,"SJAG_04862":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ribosome disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribosome dissociation factor","type":"related"},{"name":"ribosome recycling","type":"narrow"}],"termid":"GO:0032790","terms_by_termid":{"GO:0032790":null,"GO:0072344":null,"GO:0140708":null}}


id: PBO:0063664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins inositol deacylase 1","termid":"PBO:0063664"}


id: MONDO:0012324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare partial deletion of the long arm of chromosome 14 characterized by ocular anomalies (anopthalmia/microphthalmia, ptosis, hypertelorism, exophthalmos), pituitary anomalies (pituitary hypoplasia/aplasia with growth hormone deficiency and growth retardation) and hand/foot anomalies (polydactyly, short digits, pes cavus). Other clinical features may include muscular hypotonia, psychomotor development delay/intellectual disability, dysmorphic signs (facial asymmetry, microretrognathia, high-arched palate, ear anomalies), congenital genitourinary malformations, hearing impairment. Smaller 14q22 deletions may have variable expression.","definition_xrefs":["Orphanet:264200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Frias syndrome","secondary_identifiers":["MESH:C535639","MEDGEN:400621","UMLS:C1864825","OMIM:609640","GARD:2384","Orphanet:2055"],"synonyms":[{"name":"14q22-q23 microdeletion syndrome","type":"exact"},{"name":"14q22q23 microdeletion syndrome","type":"exact"},{"name":"Del(14)(q22q23)","type":"exact"},{"name":"Frias syndrome","type":"exact"},{"name":"Growth deficiency, Facial anomalies, and brachydactyly","type":"related"},{"name":"chromosome 14Q22 deletion syndrome","type":"related"},{"name":"monosomy 14q22-q23","type":"exact"},{"name":"monosomy 14q22q23","type":"exact"}],"termid":"MONDO:0012324","xrefs":{"Monarch":{"xref_id":"0012324"}}}


id: MONDO:0013363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mesomelic dysplasia, Kantaputra type","termid":"MONDO:0007977"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 2","termid":"MONDO:0016953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"chromosome 2q31.1 duplication syndrome","secondary_identifiers":["UMLS:C3150940","Orphanet:294026","MEDGEN:462290","GARD:15688","OMIM:613681","DOID:0060458"],"synonyms":[{"name":"2q31.1 microduplication syndrome","type":"exact"},{"name":"chromosome 2q31.1 duplication syndrome","type":"exact"},{"name":"dup(2)(q31.1)","type":"exact"},{"name":"mesomelic dysplasia, 2Q31.1 Duplication-related","type":"related"},{"name":"trisomy 2q31.1","type":"exact"}],"termid":"MONDO:0013363","xrefs":{"Monarch":{"xref_id":"0013363"}}}


id: PBO:0042658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 7","termid":"PBO:0042658"}


id: PBO:0054788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2201","termid":"PBO:0054788"}


id: GO:0052016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host glucan (obsolete GO:0052016)","synonyms":[{"name":"catabolism by organism of host glucan","type":"exact"}],"termid":"GO:0052016"}


id: FYPO:0007903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell lyses during mitotic interphase, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PMID:19189958","PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"cell lysis during mitotic interphase","synonyms":[{"name":"cell lysis during NETO","type":"narrow"},{"name":"vegetative cell lysis during interphase","type":"exact"}],"termid":"FYPO:0007903"}


id: FYPO:0004402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to JM216 (also called satraplatin). Cells stop growing (and may die) at a concentration of JM216 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to JM216","synonyms":[{"name":"hypersensitive to JM216","type":"exact"},{"name":"sensitive to JM216 during mitotic cell cycle","type":"related"},{"name":"sensitive to JM216 during vegetative growth","type":"exact"},{"name":"sensitive to satraplatin","type":"exact"}],"termid":"FYPO:0004402"}


id: MONDO:0007945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose 6-phosphate receptor recognition defect, Lebanese type","secondary_identifiers":["MESH:C563601","OMIM:154570","UMLS:C1835134","MEDGEN:331911"],"synonyms":[{"name":"mannose 6-phosphate receptor recognition defect, Lebanese type","type":"exact"},{"name":"phosphodiester glycoside deficiency","type":"related"}],"termid":"MONDO:0007945","xrefs":{"Monarch":{"xref_id":"0007945"}}}


id: GO:0050485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which X-H and Y-H form X-Y and the acceptor is disulfide.","definition_xrefs":["EC:1.21.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor","synonyms":[{"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulphide as acceptor","type":"exact"}],"termid":"GO:0050485"}


id: PBO:0059346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S11 pseudogene 1","termid":"PBO:0059346"}


id: MONDO:0020069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Chronic form of encephalitis.","definition_xrefs":["MONDO:patterns/chronic"],"gene_count":0,"genotype_count":0,"name":"obsolete chronic encephalitis (obsolete MONDO:0020069)","secondary_identifiers":["Orphanet:98255"],"synonyms":[{"name":"encephalitis, chronic","type":"exact"}],"termid":"MONDO:0020069","xrefs":{"Monarch":{"xref_id":"0020069"}}}


id: GO:0098713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of leucine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete leucine import across plasma membrane (obsolete GO:0098713)","synonyms":[{"name":"L-leucine import into cell","type":"narrow"},{"name":"leucine import into cell","type":"exact"}],"termid":"GO:0098713"}


id: PBO:0044092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member B1, pseudogene","termid":"PBO:0044092"}


id: PBO:0049559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 21","termid":"PBO:0049559"}


id: PBO:0053180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain containing 3","termid":"PBO:0053180"}


id: PBO:0048076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 27","termid":"PBO:0048076"}


id: MONDO:0019366
data:
  {"annotated_genes":["SJAG_05175","SJAG_04706","SJAG_05182","SJAG_04295","SJAG_02139"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84905,84906,84908,84909,84907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010027"},{"annotations":[84892,84891,84890,84894,84893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011449"}]},"cv_name":"mondo","definition":"Free sialic acid storage disease (free SASD), is a group of lysosomal storage diseases characterized by a spectrum of clinical manifestations including neurological and developmental disorders with severity ranging from the milder phenotype, Salla disease (SD), to the most severe phenotype, infantile free sialic acid storage disease (ISSD).","definition_xrefs":["Orphanet:834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysosomal amino acid transport","termid":"MONDO:0019246"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"free sialic acid storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10870","MedDRA:10067531","MESH:C538523","NANDO:2200572","icd11.foundation:1817428569","UMLS:C2931872","MedDRA:10067529","MEDGEN:419512","NANDO:1200146","SCTID:278991002"],"synonyms":[{"name":"free sialic acid storage disease","type":"exact"}],"termid":"MONDO:0019366","terms_by_termid":{"MONDO:0010027":null,"MONDO:0011449":null},"xrefs":{"Monarch":{"xref_id":"0019366"}}}


id: GO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglioside metabolic process","termid":"GO:0001573"},{"relation_name":"is_a","term_name":"glycosphingolipid biosynthetic process","termid":"GO:0006688"},{"relation_name":"is_a","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ganglioside biosynthetic process","synonyms":[{"name":"ganglioside anabolism","type":"exact"},{"name":"ganglioside biosynthesis","type":"exact"},{"name":"ganglioside formation","type":"exact"},{"name":"ganglioside synthesis","type":"exact"}],"termid":"GO:0001574"}


id: PBO:0017451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-output_of","termid":"PBO:0017451"}


id: FYPO:0001506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylcholine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular phosphatidylcholine level","synonyms":[{"name":"normal cellular PC level","type":"exact"},{"name":"normal cellular phosphatidylcholine accumulation","type":"related"},{"name":"normal cellular phosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylcholine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001506"}


id: GO:1905306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac myofibril assembly.","definition_xrefs":["PMID:16151019","GOC:BHF","GOC:rl","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"is_a","term_name":"regulation of cardiac myofibril assembly","termid":"GO:1905304"},{"relation_name":"positively_regulates","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of cardiac myofibril assembly","synonyms":[{"name":"activation of cardiac myofibril assembly","type":"narrow"},{"name":"activation of cardiac myofibril development","type":"narrow"},{"name":"activation of cardiac myofibril morphogenesis","type":"narrow"},{"name":"activation of heart myofibril assembly","type":"related"},{"name":"positive regulation of cardiac myofibril development","type":"exact"},{"name":"positive regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"positive regulation of heart myofibril assembly","type":"related"},{"name":"up regulation of cardiac myofibril assembly","type":"exact"},{"name":"up regulation of cardiac myofibril development","type":"exact"},{"name":"up regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"up regulation of heart myofibril assembly","type":"related"},{"name":"up-regulation of cardiac myofibril assembly","type":"exact"},{"name":"up-regulation of cardiac myofibril development","type":"exact"},{"name":"up-regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"up-regulation of heart myofibril assembly","type":"related"},{"name":"upregulation of cardiac myofibril assembly","type":"exact"},{"name":"upregulation of cardiac myofibril development","type":"exact"},{"name":"upregulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"upregulation of heart myofibril assembly","type":"related"}],"termid":"GO:1905306"}


id: MONDO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adipose tissue neoplasm of the chest wall.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of chest wall","termid":"MONDO:0021529"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chest wall lipoma","secondary_identifiers":["ICD9:214.8","SCTID:448270009","DOID:10200","MEDGEN:234118","NCIT:C6719","UMLS:C1332932"],"synonyms":[{"name":"chest wall lipoma","type":"exact"},{"name":"lipoma of chest wall","type":"exact"},{"name":"lipoma of the chest wall","type":"exact"}],"termid":"MONDO:0000971","xrefs":{"Monarch":{"xref_id":"0000971"}}}


id: MONDO:0004627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute or chronic inflammation of the duodenum. Causes include bacterial and viral infections and gastroesophageal reflux disease. Symptoms include vomiting and abdominal pain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenal disorder","termid":"MONDO:0002866"},{"relation_name":"is_a","term_name":"enteritis","termid":"MONDO:0043579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenitis","secondary_identifiers":["MEDGEN:4419","UMLS:C0013298","MESH:D004382","ICD9:535.60","ICD9:535.6","DOID:8643","NCIT:C94409","icd11.foundation:1595026136","SCTID:72007001","ICD10CM:K29.8"],"synonyms":[{"name":"duodenitis","type":"exact"},{"name":"duodenum inflammation","type":"exact"},{"name":"hemorrhagic duodenitis","type":"narrow"},{"name":"inflammation of duodenum","type":"exact"}],"termid":"MONDO:0004627","xrefs":{"Monarch":{"xref_id":"0004627"}}}


id: MONDO:0005243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cushing syndrome (obsolete MONDO:0005243)","termid":"MONDO:0005243","xrefs":{"Monarch":{"xref_id":"0005243"}}}


id: PBO:0078387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-2","termid":"PBO:0078387"}


id: GO:2000121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of removal of superoxide radicals.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide metabolic process","termid":"GO:0090322"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidative stress","termid":"GO:1900407"},{"relation_name":"is_a","term_name":"regulation of response to reactive oxygen species","termid":"GO:1901031"},{"relation_name":"regulates","term_name":"removal of superoxide radicals","termid":"GO:0019430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"regulation of removal of superoxide radicals","synonyms":[{"name":"regulation of removal of O2-","type":"exact"},{"name":"regulation of removal of oxygen free radicals","type":"exact"}],"termid":"GO:2000121"}


id: GO:0010676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular carbohydrate metabolic process (obsolete GO:0010676)","termid":"GO:0010676"}


id: PBO:0060532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 8 like","termid":"PBO:0060532"}


id: GO:0006529
data:
  {"annotated_genes":["SJAG_04549","SJAG_02832","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101650,110243],"is_not":false,"summary":null,"term":"GO:0006529"},{"annotations":[111262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[101651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"asparagine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"asparagine anabolism","type":"exact"},{"name":"asparagine biosynthesis","type":"exact"},{"name":"asparagine formation","type":"exact"},{"name":"asparagine synthesis","type":"exact"}],"termid":"GO:0006529","terms_by_termid":{"GO:0006529":null,"GO:0019266":null,"GO:0070981":null}}


id: GO:0070412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor-regulated SMAD signaling protein.","definition_xrefs":["PMID:19114992","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD binding","termid":"GO:0046332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"R-SMAD binding","synonyms":[{"name":"pathway restricted SMAD binding","type":"exact"},{"name":"pathway-restricted SMAD binding","type":"exact"},{"name":"receptor regulated SMAD binding","type":"exact"},{"name":"receptor-regulated SMAD binding","type":"exact"}],"termid":"GO:0070412"}


id: PBO:0048696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIS3 antisense RNA 1","termid":"PBO:0048696"}


id: PBO:0064752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 88","termid":"PBO:0064752"}


id: GO:1904471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelin production.","definition_xrefs":["GOC:TermGenie","PMID:15560120","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of endothelin production","termid":"GO:1904470"},{"relation_name":"negatively_regulates","term_name":"endothelin production","termid":"GO:1990775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of endothelin production","synonyms":[{"name":"down regulation of EDN1 secretion","type":"narrow"},{"name":"down regulation of EDN2 secretion","type":"narrow"},{"name":"down regulation of EDN3 secretion","type":"narrow"},{"name":"down regulation of endothelin secretion","type":"exact"},{"name":"down regulation of endothelin-1 secretion","type":"narrow"},{"name":"down regulation of endothelin-2 secretion","type":"narrow"},{"name":"down regulation of endothelin-3 secretion","type":"narrow"},{"name":"down-regulation of EDN1 secretion","type":"narrow"},{"name":"down-regulation of EDN2 secretion","type":"narrow"},{"name":"down-regulation of EDN3 secretion","type":"narrow"},{"name":"down-regulation of endothelin secretion","type":"exact"},{"name":"down-regulation of endothelin-1 secretion","type":"narrow"},{"name":"down-regulation of endothelin-2 secretion","type":"narrow"},{"name":"down-regulation of endothelin-3 secretion","type":"narrow"},{"name":"downregulation of EDN1 secretion","type":"narrow"},{"name":"downregulation of EDN2 secretion","type":"narrow"},{"name":"downregulation of EDN3 secretion","type":"narrow"},{"name":"downregulation of endothelin secretion","type":"exact"},{"name":"downregulation of endothelin-1 secretion","type":"narrow"},{"name":"downregulation of endothelin-2 secretion","type":"narrow"},{"name":"downregulation of endothelin-3 secretion","type":"narrow"},{"name":"inhibition of EDN1 secretion","type":"narrow"},{"name":"inhibition of EDN2 secretion","type":"narrow"},{"name":"inhibition of EDN3 secretion","type":"narrow"},{"name":"inhibition of endothelin secretion","type":"narrow"},{"name":"inhibition of endothelin-1 secretion","type":"narrow"},{"name":"inhibition of endothelin-2 secretion","type":"narrow"},{"name":"inhibition of endothelin-3 secretion","type":"narrow"},{"name":"negative regulation of EDN1 secretion","type":"narrow"},{"name":"negative regulation of EDN2 secretion","type":"narrow"},{"name":"negative regulation of EDN3 secretion","type":"narrow"},{"name":"negative regulation of endothelin secretion","type":"narrow"},{"name":"negative regulation of endothelin-1 secretion","type":"narrow"},{"name":"negative regulation of endothelin-2 secretion","type":"narrow"},{"name":"negative regulation of endothelin-3 secretion","type":"narrow"}],"termid":"GO:1904471"}


id: PBO:0055814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipin 2","termid":"PBO:0055814"}


id: GO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth process in which an oocyte irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte growth","termid":"GO:0001555"}


id: GO:0047673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthranilate + malonyl-CoA = N-malonylanthranilate + CoA.","definition_xrefs":["RHEA:17557","EC:2.3.1.113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"anthranilate N-malonyltransferase activity","secondary_identifiers":["MetaCyc:ANTHRANILATE-N-MALONYLTRANSFERASE-RXN","KEGG_REACTION:R00989"],"synonyms":[{"name":"malonyl-CoA:anthranilate N-malonyltransferase activity","type":"related"}],"termid":"GO:0047673"}


id: MONDO:0010795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually benign neoplasm composed of large cells with abundant eosinophilic granular cytoplasm. Representative examples include oncocytic neoplasms of the thyroid gland, and kidney. (NCI05)","definition_xrefs":["NCIT:C7072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncocytic neoplasm","secondary_identifiers":["MEDGEN:237181","OMIM:553000","UMLS:C1378050"],"synonyms":[{"name":"oncocytic neoplasm","type":"exact"},{"name":"oncocytic tumor","type":"exact"},{"name":"oncocytic tumour","type":"exact"},{"name":"oncocytoma","type":"broad"},{"name":"oncocytoma, benign","type":"exact"}],"termid":"MONDO:0010795","xrefs":{"Monarch":{"xref_id":"0010795"}}}


id: PR:O94518
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dic1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate chain 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.17c","synonyms":[{"name":"Spom972h-dic1","type":"exact"},{"name":"meiotically up-regulated gene 44 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94518"}


id: GO:0032995
data:
  {"annotated_genes":["SJAG_02684","SJAG_04666","SJAG_00610","SJAG_00424","SJAG_02278","SJAG_00661","SJAG_04551","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91936,92215,99671,101639],"is_not":false,"summary":null,"term":"GO:0032995"},{"annotations":[91929,87036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[102335,91935,88952,94441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the process in which a cell wall is synthesized, aggregates, and bonds together. The fungal-type cell wall contains beta-glucan and may contain chitin.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"regulates","term_name":"fungal-type cell wall biogenesis","termid":"GO:0009272"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_02278":null,"SJAG_02684":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"regulation of fungal-type cell wall biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chitin- and beta-glucan-containing cell wall biogenesis","type":"related"}],"termid":"GO:0032995","terms_by_termid":{"GO:0032995":null,"GO:0070610":null,"GO:0140748":null}}


id: PBO:0091709
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ask2 is the name which was given to the spurious ORF on the opposite strand","termid":"PBO:0091709"}


id: PBO:0087264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine-rich protein involved in PKC1 signaling pathway; protein kinase C (PKC1) signaling pathway controls cell integrity; overproduction suppresses pkc1 mutations","termid":"PBO:0087264"}


id: PBO:0087740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Ssh1 translocon complex; Sec61p homolog involved in co-translational pathway of protein translocation; not essential","termid":"PBO:0087740"}


id: MONDO:0019662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"short rib-polydactyly syndrome","termid":"MONDO:0015461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short rib-polydactyly syndrome, Majewski type","secondary_identifiers":["GARD:4833","icd11.foundation:132740256","ICD9:756.3","Orphanet:93269","SCTID:72922008"],"synonyms":[{"name":"SRPS type 2","type":"related"},{"name":"polydactyly with neonatal chondrodystrophy type 2","type":"related"},{"name":"short rib-polydactyly syndrome Majewski type","type":"related"},{"name":"short rib-polydactyly syndrome type 2","type":"exact"}],"termid":"MONDO:0019662","xrefs":{"Monarch":{"xref_id":"0019662"}}}


id: PBO:0035788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_response_to_mitotic_spindle_assembly_checkpoint_signaling","termid":"PBO:0035788"}


id: GO:0035985
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptionally-silent heterochromatin structure present in senescent cells. Contains the condensed chromatin of one chromosome and is enriched for histone modifications. Thought to repress expression of proliferation-promoting genes.","definition_xrefs":["GOC:yaf","PMID:15621527","PMID:21248468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"senescence-associated heterochromatin focus","synonyms":[{"name":"SAHF","type":"exact"},{"name":"senescence-associated heterochromatin foci","type":"exact"}],"termid":"GO:0035985"}


id: PBO:0113410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L24A; forms two bridges within ribosome, stimulates translation initiation and elongation; homologous to mammalian ribosomal protein L24, no bacterial homolog; RPL24A has a paralog, RPL24B, that arose from the whole genome duplication","termid":"PBO:0113410"}


id: GO:1902204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatocyte growth factor receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:18819921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of hepatocyte growth factor receptor signaling pathway","termid":"GO:1902202"},{"relation_name":"positively_regulates","term_name":"hepatocyte growth factor receptor signaling pathway","termid":"GO:0048012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatocyte growth factor receptor signaling pathway","synonyms":[{"name":"activation of HGF receptor signaling pathway","type":"exact"},{"name":"activation of HGF receptor signalling pathway","type":"exact"},{"name":"activation of Met signaling pathway","type":"narrow"},{"name":"activation of hepatocyte growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of HGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of HGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of Met signaling pathway","type":"narrow"},{"name":"up regulation of HGF receptor signaling pathway","type":"exact"},{"name":"up regulation of HGF receptor signalling pathway","type":"exact"},{"name":"up regulation of Met signaling pathway","type":"narrow"},{"name":"up regulation of hepatocyte growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of HGF receptor signaling pathway","type":"exact"},{"name":"up-regulation of HGF receptor signalling pathway","type":"exact"},{"name":"up-regulation of Met signaling pathway","type":"narrow"},{"name":"up-regulation of hepatocyte growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of HGF receptor signaling pathway","type":"exact"},{"name":"upregulation of HGF receptor signalling pathway","type":"exact"},{"name":"upregulation of Met signaling pathway","type":"narrow"},{"name":"upregulation of hepatocyte growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:1902204"}


id: MONDO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mansonelliasis (obsolete MONDO:0016585)","termid":"MONDO:0016585","xrefs":{"Monarch":{"xref_id":"0016585"}}}


id: MONDO:0019767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hamel cerebro-palato-cardiac syndrome is an X-linked intellectual disability syndrome (XLMR) characterized by intellectual deficiency, microcephaly and short stature. It belongs to the group of disorders collectively referred to as Renpenning syndrome.","definition_xrefs":["Orphanet:93946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Renpenning syndrome","termid":"MONDO:0010653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hamel cerebro-palato-cardiac syndrome","secondary_identifiers":["UMLS:C5681615","icd11.foundation:1903143844","MEDGEN:1842506","GARD:19240"],"termid":"MONDO:0019767","xrefs":{"Monarch":{"xref_id":"0019767"}}}


id: PBO:0067883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 185","termid":"PBO:0067883"}


id: GO:0035552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Removal of the methyl group from one or more nucleotides within a single-stranded DNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:18775698","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidative single-stranded DNA demethylation (obsolete GO:0035552)","synonyms":[{"name":"oxidative ssDNA demethylation","type":"exact"}],"termid":"GO:0035552"}


id: PBO:0046975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member B2","termid":"PBO:0046975"}


id: GO:0009055
data:
  {"annotated_genes":["SJAG_02504","SJAG_01490","SJAG_02646","SJAG_00601","SJAG_01355","SJAG_07007","SJAG_00260","SJAG_04217","SJAG_00455","SJAG_01077","SJAG_03490","SJAG_MIT03","SJAG_02744","SJAG_04265","SJAG_03929","SJAG_01190","SJAG_MIT13","SJAG_MIT20","SJAG_MIT04","SJAG_04152","SJAG_00755","SJAG_03920","SJAG_00976","SJAG_05629","SJAG_01671","SJAG_03337","SJAG_07006"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62870,88336,88699,107310,108710,114677,115554,116202],"is_not":false,"summary":null,"term":"GO:0009055"},{"annotations":[116263,114902,118464,118485,114101,91459,107745,113670,118486,118514,118513,87714,88737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[112302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[117128,117601,112844,118490,103562,107428,103975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"A molecular function representing the directed movement of electrons from one molecular entity to another, typically mediated by electron carriers or acceptors, resulting in the transfer of energy and/or the reduction-oxidation (redox) transformation of chemical species. This activity is fundamental to various biological processes, including cellular respiration and photosynthesis, as well as numerous enzymatic reactions involved in metabolic pathways.","definition_xrefs":["Wikipedia:Electron_transfer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_00455":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_03929":null,"SJAG_04152":null,"SJAG_04217":null,"SJAG_04265":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"electron transfer activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0009054","GO:0009053","Reactome:R-HSA-169260","Reactome:R-HSA-2564826"],"synonyms":[{"name":"electron acceptor activity","type":"narrow"},{"name":"electron carrier","type":"related"},{"name":"electron donor activity","type":"narrow"},{"name":"electron transporter activity","type":"related"}],"termid":"GO:0009055","terms_by_termid":{"GO:0004129":null,"GO:0008121":null,"GO:0008137":null,"GO:0009055":null}}


id: PBO:0062844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast stimulating factor 1 pseudogene 1","termid":"PBO:0062844"}


id: GO:1990543
data:
  {"annotated_genes":["SJAG_01589","SJAG_01890"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87783,102094],"is_not":false,"summary":null,"term":"GO:1990543"}]},"cv_name":"biological_process","definition":"The process in which S-adenosyl-L-methionine is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:14609944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosyl-L-methionine transmembrane transport","termid":"GO:1901962"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrial S-adenosyl-L-methionine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990543","terms_by_termid":{"GO:1990543":null}}


id: MOD:01120
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","synonyms":[{"name":"2,2,5,7,8-pentamethyl-3,4-dihydro-2H-chromene-6-sulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethyl-6-chromansulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethyl-chromane-6-sulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethylchroman-6-sulphonyl","type":"exact"},{"name":"3,4-dihydro-2,2,5,7,8-pentamethyl-2H-1-benzopyran-6-sulfonyl","type":"exact"},{"name":"Pmc","type":"exact"},{"name":"PmcRes","type":"exact"}],"termid":"MOD:01120"}


id: PBO:0062068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily B member 1 pseudogene","termid":"PBO:0062068"}


id: GO:0044762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the regulated release of a neurotransmitter from a cell in its host organism.","definition_xrefs":["PMID:1328520","PMID:7901002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host neurotransmitter secretion","termid":"GO:0044079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host neurotransmitter secretion","synonyms":[{"name":"negative regulation by symbiont of host neurotransmitter secretion","type":"exact"}],"termid":"GO:0044762"}


id: MONDO:1011317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocrine system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317","xrefs":{"Monarch":{"xref_id":"1011317"}}}


id: PBO:0082863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm D2; part of heteroheptameric complex (with Smb1p, Smd1p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm D2","termid":"PBO:0082863"}


id: PBO:0073984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 24 member 4","termid":"PBO:0073984"}


id: MONDO:0019932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated partial vaginal agenesis is a rare, non-syndromic urogenital tract malformation characterized by the absence of a vagina or the presence of a vaginal dimple shorter than 5 cm. It is often associated with uterine agenesis, hematocolpos or primary amenorrhea and dyspareunia. Ovaries and fallopian tubes are normal.","definition_xrefs":["Orphanet:96269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated partial vaginal agenesis","secondary_identifiers":["UMLS:C1261251","MEDGEN:687783","GARD:19347","SCTID:87380008","icd11.foundation:15782"],"synonyms":[{"name":"congenital absence of vagina","type":"exact"}],"termid":"MONDO:0019932","xrefs":{"Monarch":{"xref_id":"0019932"}}}


id: PBO:0075010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-21","termid":"PBO:0075010"}


id: MONDO:0006521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous eruptions resembling acne, characterized by the presence of papulonodules, pustules, comedones, or cysts in the face, trunk, and extremities. Causes include infections and the use of certain medications (e.g., antibiotics and steroids).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acneiform dermatitis","secondary_identifiers":["EFO:1000662","DOID:4399","NCIT:C35277","UMLS:C0234894","MEDGEN:68607"],"synonyms":[{"name":"Rash acneiform","type":"exact"}],"termid":"MONDO:0006521","xrefs":{"Monarch":{"xref_id":"0006521"}}}


id: PBO:0028033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_elongated_mononucleate_vegetative_cell","termid":"PBO:0028033"}


id: GO:0030960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of two peptidyl-tyrosines to form a 3'-(O4'-L-tyrosinyl)-L-tyrosine protein cross-link.","definition_xrefs":["PMID:12719529","RESID:AA0368","PDB:1NGK"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(O4'-L-tyrosinyl)-L-tyrosine (obsolete GO:0030960)","termid":"GO:0030960"}


id: GO:0010079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of vegetative meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of vegetative meristem identity","termid":"GO:0010079"}


id: PBO:0067352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 449, pseudogene","termid":"PBO:0067352"}


id: GO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any complex that mediates dynamic changes in eukaryotic chromatin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin remodeling complex (obsolete GO:0016585)","synonyms":[{"name":"chromatin remodeling complex","type":"exact"},{"name":"chromatin remodelling complex","type":"exact"},{"name":"nucleosome remodeling complex","type":"exact"}],"termid":"GO:0016585"}


id: MONDO:0007783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any malignant hyperthermia of anesthesia in which the cause of the disease is a mutation in the RYR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"malignant hyperthermia of anesthesia","termid":"MONDO:0018493"},{"relation_name":"is_a","term_name":"malignant hyperthermia, susceptibility to","termid":"MONDO:0800188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, susceptibility to, 1","secondary_identifiers":["MESH:C535694","OMIM:145600","UMLS:C2930980","MEDGEN:443948","DOID:0080990"],"synonyms":[{"name":"King syndrome","type":"related"},{"name":"King-Denborough syndrome","type":"related"},{"name":"King-Denborough syndrome, included","type":"related"},{"name":"MHS","type":"related"},{"name":"MHS1","type":"related"},{"name":"RYR1 malignant hyperthermia of anaesthesia","type":"exact"},{"name":"RYR1 malignant hyperthermia of anesthesia","type":"exact"},{"name":"hyperpyrexia, malignant","type":"related"},{"name":"hyperpyrexia, malignant;MH KING syndrome, included","type":"related"},{"name":"hyperthermia of anaesthesia","type":"related"},{"name":"hyperthermia of anesthesia","type":"related"},{"name":"malignant hyperthermia of anaesthesia caused by mutation in RYR1","type":"exact"},{"name":"malignant hyperthermia of anesthesia caused by mutation in RYR1","type":"exact"},{"name":"malignant hyperthermia susceptibility 1","type":"exact"},{"name":"malignant hyperthermia susceptibility type 1","type":"related"},{"name":"malignant hyperthermia, susceptibility to, 1","type":"exact"},{"name":"malignant hyperthermia, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to malignant hyperthermia 1","type":"related"}],"termid":"MONDO:0007783","xrefs":{"Monarch":{"xref_id":"0007783"}}}


