# terms

id: MONDO:0019230
data:
  {"annotated_genes":["SJAG_01903","SJAG_02235","SJAG_00120","SJAG_03457","SJAG_00516","SJAG_00495","SJAG_00212","SJAG_00660","SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86759,86760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[84546,84547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[86607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[84693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[86342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[86341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[85527,85526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[86019,86020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"},{"annotations":[86266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009400"},{"annotations":[86224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009401"},{"annotations":[86589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"},{"annotations":[85133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00495":null,"SJAG_00516":null,"SJAG_00660":null,"SJAG_01471":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of ornithine or proline metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18961","Orphanet:79185","UMLS:C5681278","MEDGEN:1842760"],"synonyms":[{"name":"disorder of ornithine or proline metabolism","type":"related"}],"termid":"MONDO:0019230","terms_by_termid":{"MONDO:0009053":null,"MONDO:0009400":null,"MONDO:0009401":null,"MONDO:0009796":null,"MONDO:0010208":null,"MONDO:0011006":null,"MONDO:0013051":null,"MONDO:0014702":null,"MONDO:0014706":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0019230"}}}


id: GO:0072296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the loop of Henle of the metanephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of loop of Henle identity","termid":"GO:0072086"},{"relation_name":"is_a","term_name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"},{"relation_name":"part_of","term_name":"metanephric loop of Henle development","termid":"GO:0072236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric loop of Henle identity","synonyms":[{"name":"specification of metanephric intermediate tubule identity","type":"exact"}],"termid":"GO:0072296"}


id: PBO:0052714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 6","termid":"PBO:0052714"}


id: PBO:0083231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely within telomere TEL08L","termid":"PBO:0083231"}


id: PATO:0000127
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000127 relative mass (obsolete PATO:0000127)","termid":"PATO:0000127"}


id: PBO:0015250
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pat1-as2 allele undergoes synchronous meiosis at 25 degrees C in presence of ATP analog","termid":"PBO:0015250"}


id: MONDO:0060583
data:
  {"annotated_genes":["SJAG_02075"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84750],"is_not":false,"summary":null,"term":"MONDO:0060583"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02075":null},"genotype_count":0,"is_obsolete":false,"name":"platelet abnormalities with eosinophilia and immune-mediated inflammatory disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1618052","DOID:0112004","OMIM:617718","UMLS:C4540232"],"synonyms":[{"name":"PLTEID","type":"related"},{"name":"immunodeficiency 71 with inflammatory disease and congenital thrombocytopenia","type":"exact"},{"name":"platelet abnormalities with eosinophilia and immune-mediated inflammatory disease","type":"exact"}],"termid":"MONDO:0060583","terms_by_termid":{"MONDO:0060583":null},"xrefs":{"Monarch":{"xref_id":"0060583"}}}


id: PBO:0049388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 1","termid":"PBO:0049388"}


id: MONDO:0006187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the glandular epithelium of the duodenum. It is characterized by a villous architectural pattern. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C5338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"villous adenoma","termid":"MONDO:0000502"},{"relation_name":"is_a","term_name":"adenoma of small intestine","termid":"MONDO:0021303"},{"relation_name":"is_a","term_name":"tumor of duodenum","termid":"MONDO:0021375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal villous adenoma","secondary_identifiers":["DOID:0050927","EFO:1000225","MEDGEN:232438","UMLS:C1333322"],"synonyms":[{"name":"duodenal villous adenoma","type":"exact"},{"name":"duodenum adenoma","type":"related"},{"name":"duodenum villous adenoma","type":"exact"},{"name":"villous adenoma of duodenum","type":"exact"},{"name":"villous adenoma of the duodenum","type":"exact"},{"name":"villous adenoma, duodenum","type":"exact"}],"termid":"MONDO:0006187","xrefs":{"Monarch":{"xref_id":"0006187"}}}


id: PBO:0113798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase/ GDP-Man:Man2GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase","termid":"PBO:0113798"}


id: PBO:0039054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 3","termid":"PBO:0039054"}


id: GO:1900325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltotriulose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of maltotriulose transport","termid":"GO:1900324"},{"relation_name":"negatively_regulates","term_name":"maltotriulose transport","termid":"GO:2001090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of maltotriulose transport","synonyms":[{"name":"down regulation of maltotriulose transport","type":"exact"},{"name":"down-regulation of maltotriulose transport","type":"exact"},{"name":"downregulation of maltotriulose transport","type":"exact"},{"name":"inhibition of maltotriulose transport","type":"narrow"}],"termid":"GO:1900325"}


id: PATO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a population by virtue of some of it's members' ability to survive.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-viable","termid":"PATO:0001770"}


id: PBO:0089015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methionyl-tRNA formyltransferase Fmt1","termid":"PBO:0089015"}


id: PBO:0047201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 217 member A pseudogene 1","termid":"PBO:0047201"}


id: MONDO:0009224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal iodine syndrome refers to symptoms and signs that may be observed in a fetus or newborn when the mother was exposed during pregnancy to inappropriate (insufficient or excessive) amounts of iodine. Iodine deficiency is associated with goiter and hypothyroidism. When severe iodine deficiency occurs during pregnancy, it is associated with congenital hypothyroidism that is manifested by increased neonatal morbi-mortality and severe mental dysfunction, hyperactivity, attention disorders and a substantial decrease of IQ of an irreversible nature. Excessive iodine ingestion during the third trimester of pregnancy can result in hypothyroidism and fetal goiter due to a prolonged inhibition of thyroid hormone synthesis, an increase in thyrotropin (TSH).","definition_xrefs":["Orphanet:1910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transient congenital hypothyroidism due to maternal factor","termid":"MONDO:0016555"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal iodine syndrome","secondary_identifiers":["UMLS:C4273860","OMIM:228355","GARD:2304","MEDGEN:907922","SCTID:718228001"],"synonyms":[{"name":"FIDD","type":"related"},{"name":"endemic cretinism","type":"related"},{"name":"fetal iodine deficiency disorder","type":"related"},{"name":"foetal iodine deficiency disorder","type":"related"}],"termid":"MONDO:0009224","xrefs":{"Monarch":{"xref_id":"0009224"}}}


id: PBO:0002318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog (predicted)","termid":"PBO:0002318"}


id: PBO:0055490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2924","termid":"PBO:0055490"}


id: PBO:0081358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 184","termid":"PBO:0081358"}


id: MONDO:0010451
data:
  {"annotated_genes":["SJAG_02422"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86418],"is_not":false,"summary":null,"term":"MONDO:0010451"}]},"cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the GDI1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02422":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 41","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:854647","DOID:0112058","UMLS:C3887939","GARD:22689","OMIM:300849"],"synonyms":[{"name":"GDI1 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX41","type":"related"},{"name":"intellectual developmental disorder, X-linked 41, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked 41","type":"exact"},{"name":"intellectual disability, X-linked 48","type":"related"},{"name":"intellectual disability, X-linked type 41","type":"exact"},{"name":"mental retardation, X-linked 41","type":"related"},{"name":"mental retardation, X-linked 48","type":"related"},{"name":"mental retardation, X-linked type 41","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in GDI1","type":"exact"}],"termid":"MONDO:0010451","terms_by_termid":{"MONDO:0010451":null},"xrefs":{"Monarch":{"xref_id":"0010451"}}}


id: GO:0046809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Globular nuclear domains where the transcription and replication of the viral genome occurs. More than one site can be present simultaneously.","definition_xrefs":["PMID:9499108","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear viral factory","termid":"GO:0039715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"replication compartment","synonyms":[{"name":"RC","type":"exact"}],"termid":"GO:0046809"}


id: PBO:0072084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 14","termid":"PBO:0072084"}


id: PBO:0079056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 11-2","termid":"PBO:0079056"}


id: GO:0072211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric pyramids over time, from their formation to the mature structures. Metanephric pyramids are the conical masses that constitute the renal medulla in a metanephros; they contain the loops of Henle and the medullary collecting ducts.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyramid development","termid":"GO:0072056"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric pyramids development","synonyms":[{"name":"metanephric kidney pyramid development","type":"exact"},{"name":"metanephric pyramid development","type":"exact"},{"name":"metanephric renal medulla development","type":"exact"},{"name":"metanephric renal pyramid development","type":"exact"}],"termid":"GO:0072211"}


id: MONDO:0018835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nodular regenerative hyperplasia of the liver is a rare parenchymatous liver disease characterized by diffuse benign transformation of the hepatic parenchyma into multiple small nodules (composed of regenerating hepatocytes) and that is usually asymptomatic but can lead to the development of non-cirrhotic portal hypertension and its complications, including esophageal variceal bleeding, hypersplenism and ascites. It is often associated with rheumatologic, autoimmune, hematologic, and myeloproliferative disorders as well as various immune deficiency states and exposure certain drugs and toxins.","definition_xrefs":["Orphanet:48372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0019303","MONDO:0004335"],"is_obsolete":false,"name":"nodular regenerative hyperplasia of the liver","secondary_identifiers":["UMLS:C5779783","MEDGEN:1830387","SCTID:715140008","GARD:10929","ICD9:573.8","icd11.foundation:1642018758"],"synonyms":[{"name":"miliary hepatocellular adenomatosis","type":"related"},{"name":"nodular regenerative hyperplasia","type":"related"},{"name":"non-cirrhotic nodular transformation","type":"related"},{"name":"non-cirrhotic nodulation","type":"exact"},{"name":"non-cirrhotic portal hypertension","type":"related"}],"termid":"MONDO:0018835","xrefs":{"Monarch":{"xref_id":"0018835"}}}


id: MONDO:0021179
data:
  {"annotated_genes":["SJAG_02274","SJAG_01236","SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971004"},{"annotations":[84737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010080"},{"annotations":[85651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014889"}]},"cv_name":"mondo","definition":"Disorders caused by imbalances in the protein homeostasis network - synthesis, folding, and transport of proteins; post-translational modifications; and degradation or clearance of misfolded proteins.","definition_xrefs":["MESH:D057165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01236":null,"SJAG_02274":null,"SJAG_04300":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"proteostasis deficiencies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:403490","UMLS:C2718000"],"synonyms":[{"name":"Misfolding disease, Protein","type":"narrow"},{"name":"Misfolding diseases, Protein","type":"narrow"},{"name":"Misfolding disorder, Protein","type":"narrow"},{"name":"Misfolding disorders, Protein","type":"narrow"},{"name":"Protein Misfolding disease","type":"narrow"},{"name":"Protein Misfolding diseases","type":"narrow"},{"name":"Protein Misfolding disorder","type":"narrow"},{"name":"Protein Misfolding disorders","type":"narrow"},{"name":"Protein folding disease","type":"narrow"},{"name":"Protein folding diseases","type":"narrow"},{"name":"Protein folding disorder","type":"narrow"},{"name":"Protein folding disorders","type":"narrow"},{"name":"Proteostasis deficiency","type":"exact"},{"name":"Proteostasis dysfunction","type":"exact"},{"name":"Proteostasis dysfunctions","type":"exact"},{"name":"deficiencies, Proteostasis","type":"exact"},{"name":"deficiency, Proteostasis","type":"exact"},{"name":"disease, Protein Misfolding","type":"narrow"},{"name":"disease, Protein folding","type":"narrow"},{"name":"diseases, Protein Misfolding","type":"narrow"},{"name":"diseases, Protein folding","type":"narrow"},{"name":"disorder, Protein Misfolding","type":"narrow"},{"name":"disorder, Protein folding","type":"narrow"},{"name":"disorders, Protein Misfolding","type":"narrow"},{"name":"disorders, Protein folding","type":"narrow"},{"name":"dysfunction, Proteostasis","type":"exact"},{"name":"dysfunctions, Proteostasis","type":"exact"},{"name":"folding disease, Protein","type":"narrow"},{"name":"folding diseases, Protein","type":"narrow"},{"name":"folding disorder, Protein","type":"narrow"},{"name":"folding disorders, Protein","type":"narrow"},{"name":"proteinopathy","type":"related"},{"name":"proteopathic disease","type":"related"},{"name":"proteopathy","type":"related"}],"termid":"MONDO:0021179","terms_by_termid":{"MONDO:0010080":null,"MONDO:0014889":null,"MONDO:0971004":null},"xrefs":{"Monarch":{"xref_id":"0021179"}}}


id: GO:0016093
data:
  {"annotated_genes":["SJAG_04954","SJAG_00554","SJAG_05219","SJAG_02163"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97278,99502,107479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[106186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019348"},{"annotations":[61212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["PMID:11108713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_02163":null,"SJAG_04954":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"polyprenol metabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyprenol metabolism","type":"exact"}],"termid":"GO:0016093","terms_by_termid":{"GO:0016095":null,"GO:0019348":null,"GO:0019408":null}}


id: MONDO:0005287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders in which there is a delay in development based on that expected for a given age level or stage of development. These impairments or disabilities originate before age 18, may be expected to continue indefinitely, and constitute a substantial impairment. Biological and nonbiological factors are involved in these disorders. (From American Psychiatric Glossary, 6th ed)","definition_xrefs":["MESH:D002658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental disability","secondary_identifiers":["EFO:0003852"],"termid":"MONDO:0005287","xrefs":{"Monarch":{"xref_id":"0005287"}}}


id: PBO:0080903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 3","termid":"PBO:0080903"}


id: FYPO:0004974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere localization, a process in which a telomere is transported to, and/or maintained in, a specific location, is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere localization during mitotic interphase","synonyms":[{"name":"normal telomere localisation during mitotic interphase","type":"exact"},{"name":"normal telomere localization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal telomere localization during mitotic interphase during vegetative growth","type":"exact"},{"name":"normal telomere tethering to nuclear periphery during mitotic interphase","type":"exact"}],"termid":"FYPO:0004974"}


id: PBO:0054311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1703","termid":"PBO:0054311"}


id: MONDO:0015158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"periodic fever syndrome","termid":"MONDO:0015137"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unexplained periodic fever syndrome","secondary_identifiers":["UMLS:C5681779","GARD:19831","Orphanet:102237","MEDGEN:1842497"],"termid":"MONDO:0015158","xrefs":{"Monarch":{"xref_id":"0015158"}}}


id: PATO:0000507
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000507 disease sensitivity value (obsolete PATO:0000507)","termid":"PATO:0000507"}


id: MONDO:0009425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypomandibular faciocranial dysostosis is a cranial malformation characterized by facial dysmorphism (proptosis, frontal bossing, midface and zygomatic arches hypoplasia, short nose with anteverted nostrils, microstomia with persistent buccopharyngeal membrane, severe hypoglossia with glossoptosis, severe mandibular hypoplasia, and low set ears) associated with laryngeal hypoplasia and craniosynostosis. Other variable features include cleft palate, optic nerve coloboma and choanal stenosis.","definition_xrefs":["Orphanet:1790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypomandibular faciocranial dysostosis","secondary_identifiers":["OMIM:241310","UMLS:C1855848","GARD:2907","MEDGEN:343427","MESH:C537154","SCTID:721845005"],"synonyms":[{"name":"hypomandibular faciocranial dysostosis","type":"exact"}],"termid":"MONDO:0009425","xrefs":{"Monarch":{"xref_id":"0009425"}}}


id: GO:2000687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of rubidium ion transmembrane transporter activity.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of rubidium ion transmembrane transporter activity (obsolete GO:2000687)","synonyms":[{"name":"negative regulation of Rb+ transmembrane transporter activity","type":"exact"},{"name":"negative regulation of rubidium cation transmembrane transporter activity","type":"exact"},{"name":"negative regulation of rubidium transmembrane transporter activity","type":"related"}],"termid":"GO:2000687"}


id: MOD:00083
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6,N6,N6-trimethyl-L-lysine.","definition_xrefs":["PubMed:7093227","RESID:AA0074","PubMed:6778808","PubMed:12590383","PubMed:3145979","ChEBI:17311","PubMed:4304194","PubMed:8453381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"trimethylated protonated-residue","termid":"MOD:00711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N6,N6,N6-trimethyl-L-lysine","synonyms":[{"name":"(5S)-5-amino-5-carboxy-N,N,N-trimethylpentan-1-aminium","type":"exact"},{"name":"2-amino-6-(trimethylammonio)hexanoic acid","type":"exact"},{"name":"5-azanyl-5-carboxy-N,N,N-trimethylpentanazanium","type":"exact"},{"name":"MOD_RES N6,N6,N6-trimethyllysine","type":"exact"},{"name":"N(zeta)-trimethyllysine","type":"exact"},{"name":"N-trimethylation (of lysine)","type":"exact"},{"name":"N6,N6,N6-trimethyl-L-lysine","type":"exact"},{"name":"N6,N6,N6-trimethylated L-lysine","type":"exact"},{"name":"N6,N6,N6-trimethyllysin-N6-ium","type":"exact"},{"name":"N6,N6,N6-trimethyllysine cation","type":"exact"},{"name":"N6Me3+Lys","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"epsilon-trimethyllysine","type":"exact"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:00083"}


id: MONDO:0003327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ganglioneuroblastoma arising from the peripheral nervous system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"},{"relation_name":"is_a","term_name":"ganglioneuroblastoma","termid":"MONDO:0005035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral ganglioneuroblastoma","secondary_identifiers":["UMLS:C1335387","NCIT:C6594","DOID:5195","MEDGEN:233850"],"synonyms":[{"name":"PNS ganglioneuroblastoma","type":"exact"},{"name":"ganglioneuroblastoma (disease) of peripheral nervous system","type":"exact"},{"name":"peripheral ganglioneuroblastoma","type":"exact"},{"name":"peripheral nervous system ganglioneuroblastoma","type":"exact"},{"name":"peripheral nervous system ganglioneuroblastoma (disease)","type":"exact"}],"termid":"MONDO:0003327","xrefs":{"Monarch":{"xref_id":"0003327"}}}


id: GO:1904897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GO_REF:0000058","PMID:15358192","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell proliferation","synonyms":[{"name":"regulation of Ito cell proliferation","type":"exact"},{"name":"regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"regulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904897"}


id: GO:0031915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of synaptic plasticity","synonyms":[{"name":"activation of synaptic plasticity","type":"narrow"},{"name":"stimulation of synaptic plasticity","type":"narrow"},{"name":"up regulation of synaptic plasticity","type":"exact"},{"name":"up-regulation of synaptic plasticity","type":"exact"},{"name":"upregulation of synaptic plasticity","type":"exact"}],"termid":"GO:0031915"}


id: PBO:0081354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 177","termid":"PBO:0081354"}


id: PBO:0081269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33C, pseudogene","termid":"PBO:0081269"}


id: PBO:0041238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 100","termid":"PBO:0041238"}


id: PBO:0074164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member G1","termid":"PBO:0074164"}


id: MONDO:0011734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cardioneuromyopathy with hyaline masses and nemaline rods","secondary_identifiers":["OMIM:606842","MEDGEN:339747","MESH:C564655","UMLS:C1847387"],"synonyms":[{"name":"Cardioneuromyopathy with hyaline masses and nemaline rods","type":"exact"}],"termid":"MONDO:0011734","xrefs":{"Monarch":{"xref_id":"0011734"}}}


id: PBO:0043272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 2 member A","termid":"PBO:0043272"}


id: MONDO:0958011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 117","secondary_identifiers":["MEDGEN:1848763","OMIM:620668","UMLS:C5882739"],"termid":"MONDO:0958011","xrefs":{"Monarch":{"xref_id":"0958011"}}}


id: FYPO:0005142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of proteasome core complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:16096059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased proteasome core complex binding","synonyms":[{"name":"reduced proteasome core complex binding","type":"exact"}],"termid":"FYPO:0005142"}


id: FYPO:0003780
data:
  {"alleles_by_uniquename":{"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118704],"is_not":false,"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear envelope morphology","termid":"FYPO:0003751"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03250":null},"genotype_count":1,"genotypes_by_uniquename":{"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear envelope morphology during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03250"],"single_locus_genotype_uniquenames":["sst4delta"],"synonyms":[{"name":"normal nuclear envelope morphology during mitosis during vegetative growth","type":"exact"},{"name":"normal nuclear envelope morphology during mitotic M phase","type":"related"},{"name":"normal nuclear envelope morphology during mitotic nuclear division","type":"exact"},{"name":"normal nuclear membrane morphology during mitosis","type":"narrow"}],"termid":"FYPO:0003780","terms_by_termid":{"FYPO:0003780":null}}


id: FYPO:0003658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the membrane of any part of the Golgi apparatus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to Golgi apparatus","termid":"FYPO:0002332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to Golgi membrane","synonyms":[{"name":"normal protein localisation to Golgi membrane","type":"exact"},{"name":"normal protein localization to Golgi membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to Golgi membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0003658"}


id: PBO:0055547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2983","termid":"PBO:0055547"}


id: PBO:0029844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_acetylation","termid":"PBO:0029844"}


id: MOD:01206
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3 hydrogen atom of a threonine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["Unimod:160#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc2 glycosylated residue","termid":"MOD:00528"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 O-glycosylated threonine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:01206"}


id: PBO:0064908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 1","termid":"PBO:0064908"}


id: GO:0021842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the movement of interneurons away from the signal during migration from the subpallium to the cortex.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh","GOC:dph","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in interneuron migration from the subpallium to the cortex","synonyms":[{"name":"negative chemotaxis involved in interneuron migration from the subpallium to the cortex","type":"exact"}],"termid":"GO:0021842"}


id: PR:Q9USH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.02 gene.","definition_xrefs":["UniProtKB:Q9USH2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0651 protein P31B10.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.02","synonyms":[{"name":"Spom972h-SPCP31B10.02","type":"exact"}],"termid":"PR:Q9USH2"}


id: GO:0047342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + dTTP = diphosphate + dTDP-D-galactose.","definition_xrefs":["RHEA:17165","EC:2.7.7.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"galactose-1-phosphate thymidylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02329","MetaCyc:2.7.7.32-RXN"],"synonyms":[{"name":"dTDP galactose pyrophosphorylase activity","type":"related"},{"name":"dTDP-galactose diphosphorylase activity","type":"related"},{"name":"dTDP-galactose pyrophosphorylase activity","type":"related"},{"name":"dTTP:alpha-D-galactose-1-phosphate thymidylyltransferase activity","type":"related"},{"name":"galactose 1-phosphate thymidylyl transferase activity","type":"related"},{"name":"thymidine diphosphogalactose pyrophosphorylase activity","type":"related"},{"name":"thymidine triphosphate:alpha-D-galactose 1-phosphate thymidylyltransferase activity","type":"related"}],"termid":"GO:0047342"}


id: PBO:0090303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40/YVTN repeat-like-containing domain superfamily protein","termid":"PBO:0090303"}


id: MONDO:0004368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the sphenoorbital region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoorbital meningioma","secondary_identifiers":["NCIT:C5285","MEDGEN:233458","UMLS:C1336040","DOID:7819"],"termid":"MONDO:0004368","xrefs":{"Monarch":{"xref_id":"0004368"}}}


id: PR:Q9P7C5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7C5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.13c","synonyms":[{"name":"Spom972h-cwf16","type":"exact"},{"name":"complexed with cdc5 protein 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7C5"}


id: PBO:0016912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family Rio1 (predicted)","termid":"PBO:0016912"}


id: PBO:0047162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 187 member B","termid":"PBO:0047162"}


id: GO:0016845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a carbon-nitrogen bond. Enzymes with this activity are 'miscellaneous' carbon-nitrogen lyases that cannot be grouped into one of the specific subclasses of the carbon-nitrogen lyases.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete other carbon-nitrogen lyase activity (obsolete GO:0016845)","synonyms":[{"name":"other carbon-nitrogen lyase activity","type":"exact"}],"termid":"GO:0016845"}


id: MONDO:0012773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hunter-Macdonald syndrome","secondary_identifiers":["MESH:C567445","UMLS:C2677745","OMIM:611962","MEDGEN:383181"],"synonyms":[{"name":"Hunter-Macdonald syndrome","type":"exact"}],"termid":"MONDO:0012773","xrefs":{"Monarch":{"xref_id":"0012773"}}}


id: GO:0106211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-diphospho-1D-myo-inositol 1,3,4,6-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + H+ + phosphate.","definition_xrefs":["GOC:rn","PMID:29540476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol diphosphate tetrakisphosphate diphosphatase activity","termid":"GO:0052840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-5-diphosphate-1,3,4,6-tetrakisphosphate diphosphatase activity","secondary_identifiers":["RHEA:59500"],"synonyms":[{"name":"5-PP-InsP4 activity","type":"exact"},{"name":"5-diphospho-myo-inositol 1,3,4,6-tetrakisphosphate diphosphatase activity","type":"exact"},{"name":"5-diphosphoinositol 1,3,4,6-tetrakisphosphate diphosphatase activity","type":"exact"}],"termid":"GO:0106211"}


id: FYPO:0003613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is normal (i.e. indistinguishable from wild type) during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic sister chromatid cohesion","termid":"FYPO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic sister chromatid cohesion during meiotic prophase I","synonyms":[{"name":"normal sister chromatid cohesion during meiotic prophase I","type":"exact"}],"termid":"FYPO:0003613"}


id: PBO:0046073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit M","termid":"PBO:0046073"}


id: MONDO:0018652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete biological anomaly without phenotypic characterization (obsolete MONDO:0018652)","secondary_identifiers":["Orphanet:447874"],"termid":"MONDO:0018652","xrefs":{"Monarch":{"xref_id":"0018652"}}}


id: MOD:01972
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl coenzyme A thioester.","definition_xrefs":["RESID:AA0614","PubMed:16253988","PubMed:7915164","PubMed:20977214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl coenzyme A thioester","synonyms":[{"name":"(2S)-2-amino-5-(2-[([3-([(2R)-2-hydroxy-3,3-dimethyl-4-([3'-phospho-adenosyl-5'-diphosphoryl]-oxy)-butanoyl]-amino)-propanoyl]-amino)-ethyl]-sulfanyl)-5-oxopentanoic acid","type":"exact"},{"name":"(2S)-2-amino-5-([2-(3-[(2R)-2-hydroxy-3,3-dimethyl-4-([3'-phospho-adenosyl-5'-diphosphoryl]-oxy)-butanamido]-propanamido)-ethyl]-sulfanyl)-5-oxopentanoic acid","type":"exact"},{"name":"5-glutamyl 4-[(3'-phospho-adenosyl-5'-diphosphoryl)oxy]pantetheine thioester","type":"exact"},{"name":"5-glutamyl coenzyme A thioester","type":"exact"},{"name":"5-glutamyl coenzyme A thioester intermediate","type":"exact"}],"termid":"MOD:01972"}


id: MONDO:0011637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sener syndrome","secondary_identifiers":["OMIM:606156","MEDGEN:342924","UMLS:C1853616","MESH:C537579"],"synonyms":[{"name":"Sener syndrome","type":"exact"},{"name":"frontonasal dysplasia and dilated Virchow-Robin spaces","type":"related"},{"name":"polycystic brain (cerebrum polycystica vera) associated with ectodermal dysplasia","type":"related"}],"termid":"MONDO:0011637","xrefs":{"Monarch":{"xref_id":"0011637"}}}


id: PBO:0083836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; proteasome-interacting protein involved in the assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); ortholog of human oncoprotein gankyrin, also known as p28, which interacts with the Rb tumor suppressor and CDK4/6","termid":"PBO:0083836"}


id: MONDO:0024625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"disorder of lacrimal gland","secondary_identifiers":["UMLS:C0235228","SCTID:95766002","MEDGEN:536365"],"synonyms":[{"name":"disease of lacrimal gland","type":"exact"},{"name":"disease or disorder of lacrimal gland","type":"exact"},{"name":"disorder of lacrimal gland","type":"exact"},{"name":"lacrimal gland disease","type":"exact"},{"name":"lacrimal gland disease or disorder","type":"exact"}],"termid":"MONDO:0024625","xrefs":{"Monarch":{"xref_id":"0024625"}}}


id: PBO:0047676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLII actin remodeling protein","termid":"PBO:0047676"}


id: PATO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphologic quality inhering in a bearer by virtue of the bearer's relative size, organization and distribution of its surface elements or the representation or invention of the appearance of its surface; visual and tactile surface characteristics.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"texture","termid":"PATO:0000150"}


id: PBO:0090666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GIDA family tRNA uridine 5-carboxymethylaminomethyl modification enzyme Ips1","termid":"PBO:0090666"}


id: SO:0000468
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One of the pieces of sequence that make up a golden path.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"golden_path","termid":"SO:0000688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golden_path_fragment","synonyms":[{"name":"golden path fragment","type":"exact"}],"termid":"SO:0000468"}


id: GO:0008730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tartrate = H2O + oxaloacetate.","definition_xrefs":["RHEA:15413","EC:4.2.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L(+)-tartrate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R00339","MetaCyc:LTARTDEHYDRA-RXN"],"synonyms":[{"name":"(R,R)-tartrate hydro-lyase (oxaloacetate-forming)","type":"related"},{"name":"(R,R)-tartrate hydro-lyase activity","type":"related"},{"name":"L-(+)-tartaric acid dehydratase activity","type":"related"},{"name":"L-tartrate dehydratase activity","type":"related"},{"name":"tartaric acid dehydrase activity","type":"related"},{"name":"tartrate dehydratase activity","type":"related"}],"termid":"GO:0008730"}


id: FYPO:0002637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hygromycin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on hygromycin B","synonyms":[{"name":"normal cell population growth in presence of hygromycin B","type":"exact"},{"name":"normal cell population growth on hygromycin B","type":"exact"},{"name":"normal vegetative cell population growth on hygromycin B","type":"exact"}],"termid":"FYPO:0002637"}


id: MONDO:0013542
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85484],"is_not":false,"summary":null,"term":"MONDO:0013542"}]},"cv_name":"mondo","definition":"Any Moyamoya disease in which the cause of the disease is a mutation in the ACTA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Moyamoya disease","termid":"MONDO:0016820"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"is_obsolete":false,"name":"Moyamoya disease 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614042","MEDGEN:481320","GARD:15746","UMLS:C3279690"],"synonyms":[{"name":"ACTA2 Moyamoya disease","type":"exact"},{"name":"MYMY5","type":"related"},{"name":"Moyamoya disease 5","type":"exact"},{"name":"Moyamoya disease caused by mutation in ACTA2","type":"exact"},{"name":"Moyamoya disease type 5","type":"exact"}],"termid":"MONDO:0013542","terms_by_termid":{"MONDO:0013542":null},"xrefs":{"Monarch":{"xref_id":"0013542"}}}


id: PBO:0059650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 16","termid":"PBO:0059650"}


id: PBO:0059870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 8","termid":"PBO:0059870"}


id: GO:0050888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of where on the body surface, within the body or in the environment a stimulus originates.","definition_xrefs":["ISBN:0721619908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory processing","termid":"GO:0050893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of stimulus location","termid":"GO:0050888"}


id: GO:1990983
data:
  {"annotated_genes":["SJAG_00892"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102582],"is_not":false,"summary":null,"term":"GO:1990983"}]},"cv_name":"biological_process","definition":"A process in which translation initiation is regulated by post-translation modifications of a tRNA molecule.","definition_xrefs":["PMID:27745969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation by tRNA modification","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA demethylation","type":"broad"}],"termid":"GO:1990983","terms_by_termid":{"GO:1990983":null}}


id: GO:1904558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dextromethorphan stimulus.","definition_xrefs":["GO_REF:0000071","GOC:mr","GOC:TermGenie","PMID:25796330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to isoquinoline alkaloid","termid":"GO:0014072"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dextromethorphan","termid":"GO:1904558"}


id: MONDO:0009258
data:
  {"annotated_genes":["SJAG_02954"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85492],"is_not":false,"summary":null,"term":"MONDO:0009258"}]},"cv_name":"mondo","definition":"Classic galactosemia is a life-threatening metabolic disease with onset in the neonatal period. Infants usually develop feeding difficulties, lethargy, and severe liver disease.","definition_xrefs":["Orphanet:79239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosemia","termid":"MONDO:0018116"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"disorder of galactose and fructose metabolism","termid":"MONDO:0800152"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005047","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"classic galactosemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:2011000259","NANDO:1200851","OMIM:230400","SCTID:10899004","UMLS:C0268151","DOID:0111459","MEDGEN:82777","NANDO:2200532","GARD:13639"],"synonyms":[{"name":"GALT deficiency","type":"exact"},{"name":"Galt deficiency","type":"related"},{"name":"classic galactosemia","type":"exact"},{"name":"classical galactosemia, homozygous duarte-type","type":"narrow"},{"name":"galactose-1-phosphate uridyltransferase deficiency","type":"exact"},{"name":"galactose-1-phosphate uridylyltransferase deficiency","type":"related"},{"name":"galactosemia","type":"related"},{"name":"galactosemia type 1","type":"exact"},{"name":"galactosemia, Duarte variant","type":"related"},{"name":"galactosemia, classic","type":"related"},{"name":"transferase deficiency","type":"related"}],"termid":"MONDO:0009258","terms_by_termid":{"MONDO:0009258":null},"xrefs":{"Monarch":{"xref_id":"0009258"}}}


id: MONDO:0003952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choriocarcinoma of the central nervous system that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult central nervous system germ cell tumor","termid":"MONDO:0003405"},{"relation_name":"is_a","term_name":"choriocarcinoma of the central nervous system","termid":"MONDO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult central nervous system choriocarcinoma","secondary_identifiers":["DOID:6634","MEDGEN:234582","NCIT:C5793","UMLS:C1370505"],"synonyms":[{"name":"adult CNS choriocarcinoma","type":"exact"},{"name":"adult central nervous system choriocarcinoma","type":"exact"},{"name":"adult choriocarcinoma of the central nervous system","type":"exact"},{"name":"central nervous system choriocarcinoma","type":"broad"},{"name":"choriocarcinoma of adult CNS","type":"exact"},{"name":"choriocarcinoma of adult central nervous system","type":"exact"},{"name":"choriocarcinoma of the adult CNS","type":"exact"},{"name":"choriocarcinoma of the adult central nervous system","type":"exact"},{"name":"choriocarcinoma of the central nervous system of adults","type":"exact"}],"termid":"MONDO:0003952","xrefs":{"Monarch":{"xref_id":"0003952"}}}


id: PBO:0077018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS4 antisense RNA 1","termid":"PBO:0077018"}


id: PBO:0091494
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hal3 N-term functionally complements S. cerevisiae HAL3","termid":"PBO:0091494"}


id: PBO:0091275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartyl/glutamyl-tRNA amidotransferase subunit B-related Aim41","termid":"PBO:0091275"}


id: PBO:0059278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37","termid":"PBO:0059278"}


id: GO:0050628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetate + coenzyme M + NADP+ = 2-oxopropyl-coenzyme M + CO2 + NADPH.","definition_xrefs":["EC:1.8.1.5","RHEA:16977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-oxopropyl-CoM reductase (carboxylating) activity","secondary_identifiers":["UM-BBD_reactionID:r0854","KEGG_REACTION:R05713","MetaCyc:1.8.1.5-RXN"],"synonyms":[{"name":"2-KPCC activity","type":"related"},{"name":"2-mercaptoethanesulfonate,acetoacetate:NADP+ oxidoreductase (decarboxylating)","type":"related"},{"name":"NADPH:2-(2-ketopropylthio)ethanesulfonate oxidoreductase/carboxylase activity","type":"related"},{"name":"NADPH:2-ketopropyl-coenzyme M oxidoreductase/carboxylase activity","type":"related"}],"termid":"GO:0050628"}


id: GO:0150105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained, in a location within a cell-cell junction.","definition_xrefs":["PMID:26706435","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell junction","termid":"GO:1902414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell-cell junction","termid":"GO:0150105"}


id: MONDO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amelogenesis imperfecta type 1C (obsolete MONDO:0000907)","termid":"MONDO:0000907","xrefs":{"Monarch":{"xref_id":"0000907"}}}


id: SO:1000156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal transposition whereby a copy of the segment between the first two breaks listed is inserted at the third break; the insertion is in cytologically inverted orientation with respect to its flanking segment.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_transposition","termid":"SO:1000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_interchromosomal_transposition","synonyms":[{"name":"(Drosophila)iTp","type":"related"},{"name":"inverted interchromosomal transposition","type":"exact"}],"termid":"SO:1000156"}


id: FYPO:0003725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-adenosyl)-hexaphosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003725"}


id: PR:O00103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O00103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2-20 kDa (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.15c","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc11","type":"exact"},{"name":"ubiquitin carrier protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00103"}


id: GO:0103096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dihomomethionine + 2 O2 + 2 NADPH + 2 H+ = 5-methylthiopentanaldoxime + 3 H2O + carbon dioxide + 2 NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete CYP79F1 dihomomethionine monooxygenase activity (obsolete GO:0103096)","termid":"GO:0103096"}


id: MONDO:0004535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-gestational choriocarcinoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric ovarian germ cell tumor","termid":"MONDO:0003760"},{"relation_name":"is_a","term_name":"non-gestational ovarian choriocarcinoma","termid":"MONDO:0004322"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"},{"relation_name":"is_a","term_name":"childhood gonadal germ cell tumor","termid":"MONDO:0020577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood choriocarcinoma of the ovary","secondary_identifiers":["DOID:8336","MEDGEN:234135","NCIT:C6549","UMLS:C1332987"],"synonyms":[{"name":"childhood choriocarcinoma of ovary","type":"exact"},{"name":"childhood ovarian choriocarcinoma","type":"exact"},{"name":"choriocarcinoma of ovary of childhood","type":"exact"},{"name":"paediatric choriocarcinoma of ovary","type":"exact"},{"name":"paediatric choriocarcinoma of the ovary","type":"exact"},{"name":"paediatric ovarian choriocarcinoma","type":"exact"},{"name":"pediatric choriocarcinoma of ovary","type":"exact"},{"name":"pediatric choriocarcinoma of the ovary","type":"exact"},{"name":"pediatric ovarian choriocarcinoma","type":"exact"}],"termid":"MONDO:0004535","xrefs":{"Monarch":{"xref_id":"0004535"}}}


id: MONDO:0015727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 15 is a rare chromosomal anomaly syndrome principally characterized by intrauterine growth restriction, congenital cardiac anomalies (incl. ventricular and atrial septal defects, patent ductus arteriosus) and craniofacial dysmorphism (incl. hypertelorism, downslanting palpebral fissures, wide nasal bridge). Patients also present brain (e.g. hypoplastic cerebellum, ventricular asymmetry), renal (e.g. small dysplastic kidneys), and/or genital (undescended testis, small penis, hypoplastic labia majora) anomalies. Digital and skin pigmentation abnormalities have also been reported.","definition_xrefs":["Orphanet:1706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 15 disorder","termid":"MONDO:0700022"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 15","secondary_identifiers":["MESH:C538037","GARD:5313","UMLS:C2931707","MEDGEN:419475","SCTID:764619001"],"synonyms":[{"name":"Mosaic trisomy chromosome 15","type":"exact"},{"name":"Mosaic trisomy type 15","type":"exact"},{"name":"chromosome 15, trisomy mosaicism","type":"related"},{"name":"trisomy 15 mosaicism","type":"exact"}],"termid":"MONDO:0015727","xrefs":{"Monarch":{"xref_id":"0015727"}}}


id: MONDO:0022685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar agenesis","secondary_identifiers":["MEDGEN:868414","UMLS:C4022808"],"termid":"MONDO:0022685","xrefs":{"Monarch":{"xref_id":"0022685"}}}


id: FYPO:0006849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of RNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased total RNA level during vegetative growth","synonyms":[{"name":"increased total RNA accumulation during vegetative growth","type":"related"},{"name":"increased total RNA content during vegetative growth","type":"exact"},{"name":"increased total RNA level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006849"}


id: PBO:0050739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 1","termid":"PBO:0050739"}


id: PBO:0063094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-3 family cell polarity regulator","termid":"PBO:0063094"}


id: MOD:00309
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-beta-carboxyaspartic acid.","definition_xrefs":["PubMed:7457858","OMSSA:47","RESID:AA0304","PubMed:6390094","PubMed:7138832","PubMed:8135347","Unimod:299#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-beta-carboxyaspartic acid","synonyms":[{"name":"(2S)-2-aminoethane-1,1,2-tricarboxylic acid","type":"exact"},{"name":"2-amino-3-carboxybutanedioic acid","type":"exact"},{"name":"3-carboxy-L-aspartic acid","type":"exact"},{"name":"3-carboxyaspartic acid","type":"exact"},{"name":"3CbxAsp","type":"exact"},{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"},{"name":"beta-carboxyaspartic acid","type":"exact"},{"name":"gammacarboxyld","type":"exact"}],"termid":"MOD:00309"}


id: PBO:0067661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 838, pseudogene","termid":"PBO:0067661"}


id: PBO:0077640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin related transmembrane protein 4","termid":"PBO:0077640"}


id: MONDO:1010648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypereosinophilic syndrome that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome, non-human animal","termid":"MONDO:1010076"},{"relation_name":"is_a","term_name":"cardiomyopathy, domestic cat","termid":"MONDO:1010442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypereosinophilic syndrome, domestic cat","secondary_identifiers":["OMIA:000502-9685"],"termid":"MONDO:1010648","xrefs":{"Monarch":{"xref_id":"1010648"}}}


id: MONDO:0859335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 15","secondary_identifiers":["OMIM:620161","UMLS:C5774273","DOID:0081347","MEDGEN:1824046"],"termid":"MONDO:0859335","xrefs":{"Monarch":{"xref_id":"0859335"}}}


id: GO:0102305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate + H2O = (13E)-labda-7,13-dien-15-ol + diphosphate.","definition_xrefs":["RHEA:32075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoric monoester hydrolase activity","termid":"GO:0016794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"(13E)-labda-7,13-dien-15-ol synthase activity","secondary_identifiers":["EC:3.1.7.10","MetaCyc:RXN-12892"],"termid":"GO:0102305"}


id: PBO:0046948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 74 member A1","termid":"PBO:0046948"}


id: MONDO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm characterized by nests and cord of abundant univacuolated and multivacuolated lipoblasts and mature adipocytes in a prominent myxoid to hyalinized chondroid matrix admix. It predominantly affects females.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroid lipoma","secondary_identifiers":["UMLS:C1266131","MEDGEN:266104","SCTID:404065000","DOID:10208","NCIT:C6503","ICDO:8862/0"],"termid":"MONDO:0000977","xrefs":{"Monarch":{"xref_id":"0000977"}}}


id: GO:0009358
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses polyphosphate kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"polyphosphate kinase complex","termid":"GO:0009358"}


id: PBO:0048209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit gamma2","termid":"PBO:0048209"}


id: FYPO:0003409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) is abnormal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PMID:24710126","PomBase:mah","PomBase:vw","GO:0034080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin organization","termid":"FYPO:0004308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal CENP-A containing chromatin assembly","synonyms":[{"name":"abnormal CENP-A containing nucleosome assembly","type":"related"},{"name":"abnormal CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"abnormal CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"abnormal CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"abnormal CENP-A deposition","type":"related"},{"name":"abnormal CENP-A loading","type":"related"},{"name":"abnormal CenH3-containing nucleosome assembly","type":"related"},{"name":"abnormal DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"abnormal centromere-specific histone exchange","type":"exact"},{"name":"abnormal centromere-specific nucleosome assembly","type":"exact"},{"name":"abnormal centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0003409"}


id: GO:0042740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an antibiotic that has originated externally to the cell or organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic catabolic process","termid":"GO:0017001"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"part_of","term_name":"response to antibiotic","termid":"GO:0046677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exogenous antibiotic catabolic process","synonyms":[{"name":"exogenous antibiotic breakdown","type":"exact"},{"name":"exogenous antibiotic catabolism","type":"exact"},{"name":"exogenous antibiotic degradation","type":"exact"}],"termid":"GO:0042740"}


id: GO:0061549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a sympathetic ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion development","termid":"GO:0061548"},{"relation_name":"part_of","term_name":"sympathetic nervous system development","termid":"GO:0048485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic ganglion development","synonyms":[{"name":"sympathetic ganglia development","type":"related"}],"termid":"GO:0061549"}


id: PBO:0061467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding factor 2 pseudogene 2","termid":"PBO:0061467"}


id: PBO:0084055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP); contains Rho1p-specific GAP activity, interacting with activated forms of Rho1p; functions along with Sac7p as a negative regulator of the Pkc1p-mediated cell wall integrity signaling pathway; negative regulator of cell wall 1,3-beta-glucan biosynthesis; required for efficient cell fusion; contains a RhoGAP domain and three Lin-11-Isl1-Mec-3 (LIM) domains","termid":"PBO:0084055"}


id: GO:0033618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex IV (also known as cytochrome c oxidase) in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex IV assembly","termid":"GO:0008535"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0061024","GO:0065003"],"is_obsolete":false,"name":"plasma membrane respiratory chain complex IV assembly","synonyms":[{"name":"plasma membrane cytochrome c oxidase biogenesis","type":"broad"},{"name":"plasma membrane cytochrome c oxidase complex assembly","type":"exact"}],"termid":"GO:0033618"}


id: GO:0021527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of association neurons. Association neurons are cells located in the dorsal portion of the spinal cord that integrate sensory input. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["PMID:11262869","GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"dorsal spinal cord development","termid":"GO:0021516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord association neuron differentiation","synonyms":[{"name":"spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:0021527"}


id: FYPO:0004771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar glycine level","synonyms":[{"name":"increased level of glycine in vacuole","type":"exact"},{"name":"increased vacuolar glycine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar glycine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004771"}


id: GO:0097688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurotransmitter-gated ion channel clustering process in which glutamate receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["GOC:krc","PMID:19723286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter-gated ion channel clustering","termid":"GO:0072578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glutamate receptor clustering","synonyms":[{"name":"glutamatergic receptor clustering","type":"exact"}],"termid":"GO:0097688"}


id: PBO:0027981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_thiabendazole","termid":"PBO:0027981"}


id: PBO:0073687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIVA1 apoptosis inducing factor","termid":"PBO:0073687"}


id: PATO:0002094
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An affinity inhering in a tissue constituent by virtue of the bearer exhibiting a molecular interaction for basic dyes under specific ph conditions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basophilic","termid":"PATO:0002094"}


id: PBO:0074514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A6","termid":"PBO:0074514"}


id: PBO:0017083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Mug117","termid":"PBO:0017083"}


id: RO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) directly negatively regulates process(P2) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  negatively regulates the kinase activity (P2) of protein B then P1 directly negatively regulates P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"negatively_regulates","termid":"RO:0002212"},{"relation_name":"is_a","term_name":"directly_regulates","termid":"RO:0002578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_negatively_regulates","termid":"RO:0002630"}


id: MONDO:0044237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypercholesterolemia suppressor (obsolete MONDO:0044237)","secondary_identifiers":["OMIM:144020"],"synonyms":[{"name":"hypercholesterolemia suppressor","type":"related"}],"termid":"MONDO:0044237","xrefs":{"Monarch":{"xref_id":"0044237"}}}


id: FYPO:0002847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the proteasome is lower than normal.","definition_xrefs":["PomBase:mah","PMID:22906049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level in proteasome","synonyms":[{"name":"decreased proteasomal protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in proteasome during mitotic cell cycle","type":"related"},{"name":"decreased protein level in proteasome during vegetative growth","type":"exact"},{"name":"reduced protein level in proteasome","type":"exact"}],"termid":"FYPO:0002847"}


id: PBO:0062072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 3 pseudogene","termid":"PBO:0062072"}


id: PBO:0052175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 5","termid":"PBO:0052175"}


id: GO:1902156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to G1 DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to DNA damage checkpoint signaling","termid":"GO:1902154"},{"relation_name":"is_a","term_name":"regulation of response to G1 DNA damage checkpoint signaling","termid":"GO:1902155"},{"relation_name":"positively_regulates","term_name":"response to G1 DNA damage checkpoint signaling","termid":"GO:0072432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to G1 DNA damage checkpoint signaling","synonyms":[{"name":"activation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"activation of response to G1 DNA damage checkpoint signaling","type":"narrow"},{"name":"activation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"activation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"positive regulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"positive regulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"positive regulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"up regulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"up regulation of response to G1 DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"up-regulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"up-regulation of response to G1 DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"upregulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"upregulation of response to G1 DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902156"}


id: GO:0050539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + maleimide = H+ + maleamate.","definition_xrefs":["RHEA:24476","EC:3.5.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"maleimide hydrolase activity","secondary_identifiers":["MetaCyc:3.5.2.16-RXN","KEGG_REACTION:R05781"],"synonyms":[{"name":"cyclic imide hydrolase activity","type":"related"},{"name":"cyclic-imide amidohydrolase (decyclicizing)","type":"related"},{"name":"cyclic-imide amidohydrolase (decyclizing)","type":"related"},{"name":"imidase activity","type":"broad"}],"termid":"GO:0050539"}


id: PBO:0075957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducing adaptor family member 1","termid":"PBO:0075957"}


id: PBO:0039476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18F, pseudogene","termid":"PBO:0039476"}


id: GO:0060976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the blood vessels of the heart over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vasculature development","synonyms":[{"name":"cardiac blood vessel development","type":"exact"},{"name":"cardiac vasculature development","type":"exact"},{"name":"coronary blood vessel development","type":"exact"},{"name":"heart blood vessel development","type":"exact"},{"name":"heart vasculature development","type":"exact"}],"termid":"GO:0060976"}


id: _global:decreased_in_presence_of
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a substance, where the modification is present to a lower extent in the presence than in the absence of the substance.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_in_presence_of","termid":"_global:decreased_in_presence_of"}


id: MONDO:1011014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alexander disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alexander disease, non-human animal","termid":"MONDO:1010242"},{"relation_name":"is_a","term_name":"leukodystrophy, dog","termid":"MONDO:1011005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alexander disease, dog","secondary_identifiers":["OMIA:001208-9615"],"termid":"MONDO:1011014","xrefs":{"Monarch":{"xref_id":"1011014"}}}


id: PBO:0066083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 11","termid":"PBO:0066083"}


id: GO:0019054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in the processes and activities of its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host cellular process (obsolete GO:0019054)","secondary_identifiers":["Reactome:R-HSA-168276","Reactome:R-HSA-9833110"],"synonyms":[{"name":"modification by virus of host cellular process","type":"exact"},{"name":"modulation by virus of host process","type":"broad"},{"name":"modulation of cellular process in host by virus","type":"related"},{"name":"regulation by virus of host cellular process","type":"exact"},{"name":"regulation of cellular process in host by virus","type":"exact"},{"name":"regulation of host cellular process by virus","type":"exact"},{"name":"viral host cell process manipulation","type":"exact"}],"termid":"GO:0019054"}


id: GO:0048341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"paraxial mesoderm morphogenesis","termid":"GO:0048340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesoderm formation","secondary_identifiers":["Reactome:R-HSA-9793380"],"termid":"GO:0048341"}


id: PBO:0054266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1651","termid":"PBO:0054266"}


id: PBO:0083793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein of the mitochondrial intermembrane space; forms a complex with Tim10p (TIM10 complex) that delivers hydrophobic proteins to the TIM22 complex for insertion into the inner membrane","termid":"PBO:0083793"}


id: PBO:0060564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nibrin","termid":"PBO:0060564"}


id: SO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from cyanelle sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"cyanelle_sequence","termid":"SO:0000746"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_gene","synonyms":[{"name":"cyanelle gene","type":"exact"}],"termid":"SO:0000094"}


id: PBO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_multiseptate_vegetative_cell,_single_septa_between_nuclei","termid":"PBO:0030366"}


id: MONDO:0859530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, sarcoplasmic body","secondary_identifiers":["UMLS:C5830362","OMIM:620286","MEDGEN:1840998"],"termid":"MONDO:0859530","xrefs":{"Monarch":{"xref_id":"0859530"}}}


id: MONDO:0019917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 20 (UPD 20) is a very rare chromosomal anomaly in which both copies of chromosome 20 are inherited from the mother. The main feature described is prenatal and postnatal growth retardation. Microcephaly, minor dysmorphic features and psychomotor developmental delay have been occasionally reported. Maternal UPD20 is most often ascertained by a mosaic trisomy 20 pregnancy.","definition_xrefs":["Orphanet:96186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 20","secondary_identifiers":["DOID:0111714","GARD:16849","SCTID:715735007","icd11.foundation:700797720","UMLS:C4275029","MEDGEN:909388","OMIM:617352"],"synonyms":[{"name":"MBCS","type":"related"},{"name":"MULCHANDANI-BHOJ-CONLIN syndrome","type":"related"},{"name":"UPD(20)mat","type":"exact"},{"name":"maternal UPD(20)","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 20","type":"exact"},{"name":"uniparental disomy, maternal, chromosome 20","type":"related"}],"termid":"MONDO:0019917","xrefs":{"Monarch":{"xref_id":"0019917"}}}


id: GO:0047853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + bis-D-fructose 2',1:2,1'-dianhydride = inulobiose.","definition_xrefs":["MetaCyc:DIFRUCTOSE-ANHYDRIDE-SYNTHASE-RXN","RHEA:15041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"difructose-anhydride synthase activity","secondary_identifiers":["EC:4.2.1.179"],"synonyms":[{"name":"bis-D-fructose 2',1:2,1'-dianhydride fructohydrolase activity","type":"related"},{"name":"inulobiose hydrolase activity","type":"related"}],"termid":"GO:0047853"}


id: GO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine catabolic process","termid":"GO:0042424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine catabolic process","secondary_identifiers":["Reactome:R-HSA-379398","Reactome:R-HSA-379397"],"synonyms":[{"name":"dopamine breakdown","type":"exact"},{"name":"dopamine catabolism","type":"exact"},{"name":"dopamine degradation","type":"exact"}],"termid":"GO:0042420"}


id: MONDO:0009712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive condition caused by mutation(s) in the RYR1 gene, encoding ryanodine receptor 1. It may be characterized clinically by neonatal hypotonia, delayed motor development, and generalized muscle weakness, and amyotrophy. Pathologically, the absence of mitochondria and focal disorganization of the sarcomere appear as \\\"minicores\\\" on ATPase staining as a result of focal defects in oxidative activity.","definition_xrefs":["NCIT:C150608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiminicore myopathy","termid":"MONDO:0018948"},{"relation_name":"is_a","term_name":"RYR1-related myopathy","termid":"MONDO:0100150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital multicore myopathy with external ophthalmoplegia","secondary_identifiers":["UMLS:C1850674","NANDO:2200872","OMIM:255320","MEDGEN:340597","Orphanet:98905","GARD:10316"],"synonyms":[{"name":"minicore myopathy","type":"related"},{"name":"minicore myopathy with external ophthalmoplegia","type":"related"},{"name":"minicore myopathy, antenatal onset, with arthrogryposis","type":"exact"},{"name":"multicore myopathy","type":"related"},{"name":"multicore myopathy with external ophthalmoplegia","type":"related"},{"name":"multiminicore disease with external ophthalmoplegia","type":"related"},{"name":"multiminicore myopathy multicore myopathy with external ophthalmoplegia","type":"related"}],"termid":"MONDO:0009712","xrefs":{"Monarch":{"xref_id":"0009712"}}}


id: GO:0060164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process controlling the activation and/or rate at which a relatively unspecialized cell acquires features of a neuron.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"is_a","term_name":"regulation of timing of cell differentiation","termid":"GO:0048505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of neuron differentiation","termid":"GO:0060164"}


id: PR:000041369
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3-like centromeric protein cnp1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"},{"relation_name":"is_a","term_name":"histone H3-like centromeric protein cnp1","termid":"PR:000041443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-like centromeric protein cnp1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.17","synonyms":[{"name":"CENP-A homolog (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cnp1","type":"exact"},{"name":"centromere protein 1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000041369"}


id: MONDO:0011452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypotrichosis in which the cause of the disease is a mutation in the LIPH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"isolated familial wooly hair disorder","termid":"MONDO:0008686"},{"relation_name":"is_a","term_name":"hypotrichosis simplex","termid":"MONDO:0018914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 7","secondary_identifiers":["OMIM:604379","GARD:8178","MEDGEN:322969","MESH:C536973","DOID:0110704","UMLS:C1836672"],"synonyms":[{"name":"HYPT7","type":"exact"},{"name":"LAH2","type":"exact"},{"name":"LIPH hypotrichosis","type":"exact"},{"name":"Lah2","type":"exact"},{"name":"Mari type alopecia universalis congenita","type":"related"},{"name":"Wh/Ht","type":"related"},{"name":"alopecia universalis congenita, Mari type","type":"related"},{"name":"hypotrichosis 7","type":"exact"},{"name":"hypotrichosis caused by mutation in LIPH","type":"exact"},{"name":"hypotrichosis type 7","type":"exact"},{"name":"hypotrichosis, autosomal recessive","type":"related"},{"name":"hypotrichosis, localized, autosomal recessive 2","type":"exact"},{"name":"hypotrichosis, total, Mari type","type":"related"},{"name":"total Mari type hypotrichosis,","type":"exact"},{"name":"total hypotrichosis, Mari type","type":"related"},{"name":"woolly hair, autosomal recessive 2 with or without hypotrichosis","type":"exact"},{"name":"woolly hair, autosomal recessive 2, with or without hypotrichosis","type":"related"},{"name":"wooly hair, autosomal recessive 2 with or without hypotrichosis","type":"exact"},{"name":"wooly hair, autosomal recessive 2, with or without hypotrichosis","type":"related"}],"termid":"MONDO:0011452","xrefs":{"Monarch":{"xref_id":"0011452"}}}


id: GO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAP kinase activity","termid":"GO:0043407"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"},{"relation_name":"is_a","term_name":"negative regulation of JNK cascade","termid":"GO:0046329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of JUN kinase activity","synonyms":[{"name":"down regulation of JNK activity","type":"exact"},{"name":"down-regulation of JNK activity","type":"exact"},{"name":"downregulation of JNK activity","type":"exact"},{"name":"inhibition of JNK activity","type":"narrow"},{"name":"negative regulation of JUNK activity","type":"exact"}],"termid":"GO:0043508"}


id: PBO:0016047
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating type Auxiliary Minus","termid":"PBO:0016047"}


id: MONDO:0000765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete corneal stromal dystrophy (obsolete MONDO:0000765)","termid":"MONDO:0000765","xrefs":{"Monarch":{"xref_id":"0000765"}}}


id: MONDO:1010894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the CLN8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN8, dog","secondary_identifiers":["OMIA:001506-9615"],"synonyms":[{"name":"CLN8","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 8, dog","type":"related"}],"termid":"MONDO:1010894","xrefs":{"Monarch":{"xref_id":"1010894"}}}


id: GO:1900456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of invasive growth in response to glucose limitation by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8710886","PMID:12024013","GOC:dgf","PMID:9987114","PMID:10373537","GOC:TermGenie","PMID:16568252","PMID:9811878","PMID:10591965","PMID:15466424"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invasive growth in response to glucose limitation by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900456)","synonyms":[{"name":"regulation of colony morphology by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of invasive growth in response to glucose limitation by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900456"}


id: MONDO:0030449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 118, with cochlear aplasia","secondary_identifiers":["UMLS:C5561996","MEDGEN:1794206","OMIM:619553"],"synonyms":[{"name":"DFNB118","type":"exact"},{"name":"deafness, autosomal recessive 118, with cochlear aplasia","type":"narrow"}],"termid":"MONDO:0030449","xrefs":{"Monarch":{"xref_id":"0030449"}}}


id: MONDO:0021545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant mesenchymal neoplasm arising from smooth, skeletal, or cardiac muscle.","definition_xrefs":["NCIT:C4063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell neoplasm","termid":"MONDO:0002616"},{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomatous neoplasm","secondary_identifiers":["MEDGEN:76477","MESH:D009379","MESH:D019042","UMLS:C0282606"],"synonyms":[{"name":"muscle neoplasm","type":"exact"},{"name":"muscle tissue neoplasm","type":"related"},{"name":"muscle tissue neoplasms","type":"related"},{"name":"muscle tumor","type":"exact"},{"name":"muscle tumour","type":"exact"},{"name":"myoblastoma","type":"related"},{"name":"myoblastomas","type":"related"},{"name":"myofibroblastoma","type":"related"},{"name":"myofibroblastomas","type":"related"},{"name":"myomatous neoplasm","type":"exact"},{"name":"myomatous tumor","type":"exact"},{"name":"myomatous tumour","type":"exact"},{"name":"neoplasm of muscle","type":"exact"},{"name":"neoplasm of the muscle","type":"exact"},{"name":"neoplasm, muscle tissue","type":"related"},{"name":"tumor of muscle","type":"exact"},{"name":"tumor of the muscle","type":"exact"},{"name":"tumour of muscle","type":"exact"},{"name":"tumour of the muscle","type":"exact"}],"termid":"MONDO:0021545","xrefs":{"Monarch":{"xref_id":"0021545"}}}


id: PR:Q10346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F12.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.04c","synonyms":[{"name":"Spom972h-SPAC1F12.04c","type":"exact"}],"termid":"PR:Q10346"}


id: PBO:0059894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 17","termid":"PBO:0059894"}


id: GO:1901384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chorionic trophoblast cell proliferation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of chorionic trophoblast cell proliferation","termid":"GO:1901382"},{"relation_name":"positively_regulates","term_name":"chorionic trophoblast cell proliferation","termid":"GO:0097360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chorionic trophoblast cell proliferation","synonyms":[{"name":"activation of chorionic trophoblast cell proliferation","type":"narrow"},{"name":"up regulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"up-regulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"upregulation of chorionic trophoblast cell proliferation","type":"exact"}],"termid":"GO:1901384"}


id: MONDO:0044789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from the sweat glands. Most cases present as nodular lesions on the digits, usually in the hands. It is characterized by the presence of epithelial cells in the dermis forming nodules. Cystic structures containing papillary projections are also present. It may recur and metastasize, most commonly to the lungs.","definition_xrefs":["NCIT:C27534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary eccrine carcinoma","termid":"MONDO:0003531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"digital papillary eccrine carcinoma","secondary_identifiers":["DOID:5590","ONCOTREE:ADPA","MEDGEN:277955","UMLS:C1367789"],"synonyms":[{"name":"aggressive digital papillary adenocarcinoma","type":"exact"},{"name":"digit papillary eccrine carcinoma","type":"exact"},{"name":"digital papillary carcinoma","type":"exact"},{"name":"digital papillary carcinoma of skin","type":"exact"},{"name":"digital papillary eccrine carcinoma","type":"exact"},{"name":"papillary digital eccrine carcinoma","type":"exact"},{"name":"papillary eccrine carcinoma of digit","type":"exact"}],"termid":"MONDO:0044789","xrefs":{"Monarch":{"xref_id":"0044789"}}}


id: PBO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA,poly(A)-bearing (predicted)","termid":"PBO:0000116"}


id: MONDO:0859576
data:
  {"annotated_genes":["SJAG_03436"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85143],"is_not":false,"summary":null,"term":"MONDO:0859576"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"},{"relation_name":"is_a","term_name":"Atelis syndrome","termid":"MONDO:0859393"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03436":null},"genotype_count":0,"is_obsolete":false,"name":"Atelis syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774282","OMIM:620185","MEDGEN:1824055"],"termid":"MONDO:0859576","terms_by_termid":{"MONDO:0859576":null},"xrefs":{"Monarch":{"xref_id":"0859576"}}}


id: PBO:0046721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EvC ciliary complex subunit 1","termid":"PBO:0046721"}


id: FYPO:0006099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cytoplasm","termid":"FYPO:0006098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm","synonyms":[{"name":"decreased protein localisation to cytoplasm","type":"exact"},{"name":"decreased protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cytoplasm during vegetative growth","type":"exact"},{"name":"reduced protein localization to cytoplasm","type":"exact"}],"termid":"FYPO:0006099"}


id: MOD:00729
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a pentose sugar group through a glycosidic bond","definition_xrefs":["DeltaMass:172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"pentosylated residue","synonyms":[{"name":"Pent","type":"exact"},{"name":"Pentoses (Ara, Rib, Xyl)","type":"exact"},{"name":"Pentosyl","type":"exact"}],"termid":"MOD:00729"}


id: PBO:0067875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 177","termid":"PBO:0067875"}


id: GO:0046438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-cysteine, (S)-2-amino-3-mercaptopropanoic acid, which occurs naturally in firefly luciferin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"D-cysteine metabolic process","synonyms":[{"name":"D-cysteine metabolism","type":"exact"}],"termid":"GO:0046438"}


id: PBO:0034622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CRE_promoter_during_cellular_response_to_miconazole","termid":"PBO:0034622"}


id: PBO:0069472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 739, pseudogene","termid":"PBO:0069472"}


id: GO:1905686
data:
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id: PBO:0034500
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id: FYPO:0000611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested in S phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic interphase","termid":"FYPO:0001028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic S phase","synonyms":[{"name":"abnormal cell cycle arrest in S phase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic S phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in S phase","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with incompletely replicated DNA","type":"exact"},{"name":"mitotic cell cycle progression in S phase: arrested","type":"related"}],"termid":"FYPO:0000611"}


id: PBO:0066080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 8","termid":"PBO:0066080"}


id: PBO:0060676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuron derived neurotrophic factor","termid":"PBO:0060676"}


id: MONDO:0019321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heterogeneous group of cases that are clinically diagnosed as Werner syndrome (WS) but do not carry WRN gene mutations. Similar to classical WS caused by WRN mutations, patients generally exhibit an aged appearance and common age-related disorders at earlier ages compared to the general population.","definition_xrefs":["Orphanet:79474"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical Werner syndrome","secondary_identifiers":["icd11.foundation:1661142154","MEDGEN:894770","GARD:11910","UMLS:C4275075","SCTID:715633008"],"synonyms":[{"name":"atypical progeroid syndrome","type":"exact"}],"termid":"MONDO:0019321","xrefs":{"Monarch":{"xref_id":"0019321"}}}


id: MONDO:0009098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dextrocardia with unusual facies and microphthalmia","secondary_identifiers":["MESH:C538269","MEDGEN:346559","UMLS:C1857298","OMIM:221950"],"synonyms":[{"name":"Aughton syndrome","type":"related"},{"name":"dextrocardia with unusual facies and microphthalmia","type":"exact"},{"name":"dextrocardia, microphthalmia, cleft palate, choreoathetosis and intellectual disability","type":"related"},{"name":"dextrocardia, microphthalmia, cleft palate, choreoathetosis and mental retardation","type":"related"}],"termid":"MONDO:0009098","xrefs":{"Monarch":{"xref_id":"0009098"}}}


id: CHEBI:16811
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine","termid":"CHEBI:16811"}


id: PBO:0087567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of telomeric Ku complex (Yku70p-Yku80p); involved in telomere length maintenance, structure and telomere position effect; required for localization of telomerase ribonucleoprotein via interaction with TLC1 guide RNA; relocates to sites of double-strand cleavage to promote nonhomologous end joining during DSB repair; colocalizes with quiescent cell telomere hyperclusters","termid":"PBO:0087567"}


id: PBO:0087649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hat1p-Hat2p histone acetyltransferase complex; required for high affinity binding of the complex to free histone H4, thereby enhancing Hat1p activity; similar to human RbAp46 and 48; has a role in telomeric silencing","termid":"PBO:0087649"}


id: FYPO:0002613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation is normal at the mating type locus. All histone H2A phosphorylation may be assayed, or phosphorylation of specific sites on histone H2A may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H2A phosphorylation at mating type locus during vegetative growth","synonyms":[{"name":"normal histone H2A phosphorylation at mating type locus during mitotic cell cycle","type":"related"},{"name":"normal histone H2A phosphorylation at mating type region during vegetative growth","type":"exact"}],"termid":"FYPO:0002613"}


id: PBO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.39","termid":"PBO:0002281"}


id: MONDO:0018231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary bone dysplasia with progressive ossification of skin, skeletal muscle, fascia, tendons and ligaments (obsolete MONDO:0018231)","secondary_identifiers":["Orphanet:364531"],"synonyms":[{"name":"primary osteodysplasia with progressive ossification of skin, skeletal muscle, fascia, tendons and ligaments","type":"exact"},{"name":"primary skeletal dysplasia with progressive ossification of skin, skeletal muscle, fascia, tendons and ligaments","type":"exact"}],"termid":"MONDO:0018231","xrefs":{"Monarch":{"xref_id":"0018231"}}}


id: PBO:0088676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 3 Pre9","termid":"PBO:0088676"}


id: MONDO:0011825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcus, group A, severity of infection by","secondary_identifiers":["MEDGEN:375858","UMLS:C1846298","OMIM:607395"],"synonyms":[{"name":"streptococcus, group A, severity of infection by","type":"exact"}],"termid":"MONDO:0011825","xrefs":{"Monarch":{"xref_id":"0011825"}}}


id: MONDO:0003862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant peripheral nerve sheath tumor characterized by the presence of malignant cells that contain melanin and formation of psammoma bodies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant melanocytic neoplasm of the peripheral nerve sheath","termid":"MONDO:0003863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"melanotic psammomatous malignant peripheral nerve sheath tumor","secondary_identifiers":["UMLS:C1321709","DOID:6344","MEDGEN:730167","NCIT:C6910"],"synonyms":[{"name":"melanocytic psammomatous MPNST","type":"exact"},{"name":"melanocytic psammomatous malignant peripheral nerve sheath tumor","type":"exact"},{"name":"melanocytic psammomatous malignant peripheral nerve sheath tumour","type":"exact"},{"name":"melanotic psammomatous malignant peripheral nerve sheath tumor","type":"exact"}],"termid":"MONDO:0003862","xrefs":{"Monarch":{"xref_id":"0003862"}}}


id: GO:0044813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycolytic fermentation beginning with the anaerobic conversion of glucose to pyruvate by the glycolytic pathway, continuing with pyruvate:ferredoxin oxidoreductase (PFOR) activity. This pathway is found in strict anaerobes such as Clostridia species.","definition_xrefs":["PMID:20692761","PMID:20395274","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"glycolytic fermentation via PFOR pathway","secondary_identifiers":["MetaCyc:CENTFERM-PWY"],"termid":"GO:0044813"}


id: SO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that occurs within a gene but falls outside of all transcript features. This occurs when alternate transcripts of a gene do not share overlapping sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intragenic_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:intragenic_variant","type":"exact"},{"name":"intragenic variant","type":"exact"},{"name":"snpEff:INTRAGENIC","type":"exact"}],"termid":"SO:0002011"}


id: MONDO:0003636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the vulva. It is characterized by the presence of malignant basaloid glandular epithelial cells that resemble sebaceous epithelium and are arranged in cords and nests.","definition_xrefs":["NCIT:C40309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sebaceous adenocarcinoma","termid":"MONDO:0006962"},{"relation_name":"is_a","term_name":"vulvar adenocarcinoma","termid":"MONDO:0024336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"vulvar sebaceous carcinoma","secondary_identifiers":["DOID:5761","UMLS:C1520094","MEDGEN:276996"],"synonyms":[{"name":"mammalian vulva sebaceous adenocarcinoma","type":"exact"},{"name":"sebaceous adenocarcinoma of mammalian vulva","type":"exact"}],"termid":"MONDO:0003636","xrefs":{"Monarch":{"xref_id":"0003636"}}}


id: GO:0048811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the analia of the male are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc.","definition_xrefs":["GOC:mtg_sensu","PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"analia morphogenesis","termid":"GO:0048809"},{"relation_name":"part_of","term_name":"male analia development","termid":"GO:0045496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male analia morphogenesis","termid":"GO:0048811"}


id: PBO:0028399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_ricinoleic_acid","termid":"PBO:0028399"}


id: PBO:0042987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint kinase 2","termid":"PBO:0042987"}


id: MONDO:0013246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic dysfunction-associated steatotic liver disease","termid":"MONDO:0013209"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty liver disease, nonalcoholic, susceptibility to, 2","secondary_identifiers":["OMIM:613387","UMLS:C3150651","MEDGEN:462001"],"synonyms":[{"name":"NAFLD2","type":"exact"},{"name":"fatty liver disease, nonalcoholic, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0013246","xrefs":{"Monarch":{"xref_id":"0013246"}}}


id: PBO:0090453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup131","termid":"PBO:0090453"}


id: GO:0031058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent alteration of a histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone modification (obsolete GO:0031058)","synonyms":[{"name":"activation of histone modification","type":"narrow"},{"name":"stimulation of histone modification","type":"narrow"},{"name":"up regulation of histone modification","type":"exact"},{"name":"up-regulation of histone modification","type":"exact"},{"name":"upregulation of histone modification","type":"exact"}],"termid":"GO:0031058"}


id: PBO:0086195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that activates Rub1p (NEDD8) before neddylation; acts together with Uba3p; may play a role in protein degradation","termid":"PBO:0086195"}


id: GO:0043029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell homeostasis","synonyms":[{"name":"T lymphocyte homeostasis","type":"exact"},{"name":"T-cell homeostasis","type":"exact"},{"name":"T-lymphocyte homeostasis","type":"exact"}],"termid":"GO:0043029"}


id: PBO:0064446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POC5 centriolar protein","termid":"PBO:0064446"}


id: PBO:0004597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6 (predicted)","termid":"PBO:0004597"}


id: MONDO:1011540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypokalaemic periodic paralysis that occurs in lion.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypokalaemic periodic paralysis, non-human animal","termid":"MONDO:1011434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypokalaemic periodic paralysis, lion","secondary_identifiers":["OMIA:001759-9689"],"termid":"MONDO:1011540","xrefs":{"Monarch":{"xref_id":"1011540"}}}


id: PBO:0002661
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein Intermediate light chain-Like","termid":"PBO:0002661"}


id: PBO:0070578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 44","termid":"PBO:0070578"}


id: GO:0006080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mannan backbone composed of D-mannose unites, substituted with D-glucose and/or D-galactose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"substituted mannan metabolic process","synonyms":[{"name":"substituted mannan metabolism","type":"exact"}],"termid":"GO:0006080"}


id: PBO:0073481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum/glucocorticoid regulated kinase 2","termid":"PBO:0073481"}


id: PBO:0072049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 19","termid":"PBO:0072049"}


id: MONDO:0019285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A nail anomaly that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic nail anomaly (obsolete MONDO:0019285)","secondary_identifiers":["Orphanet:79370"],"synonyms":[{"name":"syndrome associated with nail anomaly","type":"exact"},{"name":"syndromic nail anomaly","type":"exact"}],"termid":"MONDO:0019285","xrefs":{"Monarch":{"xref_id":"0019285"}}}


id: PBO:0111423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo7","termid":"PBO:0111423"}


id: PBO:0075774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 2","termid":"PBO:0075774"}


id: GO:2000445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of toll-like receptor 21 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor signaling pathway","termid":"GO:0034123"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 21 signaling pathway","termid":"GO:2000443"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 21 signaling pathway","termid":"GO:0035682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 21 signaling pathway","synonyms":[{"name":"positive regulation of TLR21 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 21 signalling pathway","type":"exact"}],"termid":"GO:2000445"}


id: PBO:0090516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxy-acid dehydratase Ilv3","termid":"PBO:0090516"}


id: SO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region at the 3' end of a mature transcript (following the stop codon) that is not translated into a protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_UTR","secondary_identifiers":["http://en.wikipedia.org/wiki/Three_prime_untranslated_region"],"synonyms":[{"name":"INSDC_feature:3'UTR","type":"exact"},{"name":"three prime UTR","type":"exact"},{"name":"three prime untranslated region","type":"exact"}],"termid":"SO:0000205"}


id: GO:0003204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cardiac skeleton over time, from its formation to the mature structure. The cardiac skeleton is a specialized extracellular matrix that separates the atria from the ventricles and provides physical support for the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac skeleton development","synonyms":[{"name":"heart fibrous skeleton development","type":"exact"}],"termid":"GO:0003204"}


id: PBO:0040574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-glucuronyltransferase 1","termid":"PBO:0040574"}


id: PBO:0041145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4 pseudogene 4","termid":"PBO:0041145"}


id: GO:0019560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including hydantoin-5-propionate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"histidine catabolic process to hydantoin-5-propionate","secondary_identifiers":["MetaCyc:HISHP-PWY"],"synonyms":[{"name":"histidine breakdown to hydantoin-5-propionate","type":"exact"},{"name":"histidine degradation to hydantoin-5-propionate","type":"exact"}],"termid":"GO:0019560"}


id: MONDO:0009054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive cutis laxa type 2A","termid":"MONDO:0018163"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive cutis laxa type 2, classic type","secondary_identifiers":["Orphanet:357074","SCTID:73856006","MESH:C562632","UMLS:C5679922","DOID:0070141","MEDGEN:1825992","GARD:17546"],"synonyms":[{"name":"ARCL2, Debre type","type":"exact"},{"name":"ARCL2, Debré type","type":"exact"},{"name":"ARCL2, classic type","type":"exact"},{"name":"ARCL2A","type":"related"},{"name":"Arcl2","type":"related"},{"name":"autosomal recessive cutis laxa type 2, Debre type","type":"exact"},{"name":"autosomal recessive cutis laxa type 2, Debré type","type":"exact"},{"name":"autosomal recessive cutis laxa type II classic type","type":"related"}],"termid":"MONDO:0009054","xrefs":{"Monarch":{"xref_id":"0009054"}}}


id: PBO:0086122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for fatty acid uptake; protein abundance increases in cortical patches in response to oleate exposure; the authentic, non-tagged protein is detected in a phosphorylated state in highly purified mitochondria in high-throughput studies; FAT3 has a paralog, YLR413W, that arose from the whole genome duplication","termid":"PBO:0086122"}


id: PBO:0075306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOCS3 divergent transcript","termid":"PBO:0075306"}


id: PBO:0004565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"response regulator Mcs4","termid":"PBO:0004565"}


id: PBO:0067165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 218, pseudogene","termid":"PBO:0067165"}


id: PBO:0001921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clp1-interacting protein Nsk1","termid":"PBO:0001921"}


id: PBO:0013077
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisB","termid":"PBO:0013077"}


id: PBO:0053946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1249","termid":"PBO:0053946"}


id: PBO:0110972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K9 methyltransferase (Suv39) Clr4","termid":"PBO:0110972"}


id: PBO:0001378
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lesch-Nyhan syndrome and Kelley-Seegmiller syndrome","termid":"PBO:0001378"}


id: GO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nucleic acid via hydrogen bonds between the bases of a gene product molecule and the bases of a target DNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"},{"relation_name":"is_a","term_name":"molecular template activity","termid":"GO:0140489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"DNA template activity","synonyms":[{"name":"base pairing with DNA","type":"related"}],"termid":"GO:0000497"}


id: PBO:0113244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclease required for DNA single- and double-strand break repair; acts at a post-incision step in repair of breaks that result from interstrand cross-links produced by a variety of mono- and bi-functional psoralen derivatives; induced by UV-irradiation; forms nuclear foci upon DNA replication stress; translocates to mitochondria under genotoxic agents","termid":"PBO:0113244"}


id: GO:1900700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of o-orsellinic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of o-orsellinic acid biosynthetic process","termid":"GO:1900698"},{"relation_name":"positively_regulates","term_name":"o-orsellinic acid biosynthetic process","termid":"GO:1900584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of o-orsellinic acid biosynthetic process","synonyms":[{"name":"activation of o-orsellinic acid anabolism","type":"exact"},{"name":"activation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"activation of o-orsellinic acid biosynthetic process","type":"narrow"},{"name":"activation of o-orsellinic acid formation","type":"exact"},{"name":"activation of o-orsellinic acid synthesis","type":"exact"},{"name":"positive regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"positive regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"positive regulation of o-orsellinic acid formation","type":"exact"},{"name":"positive regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"up regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"up regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"up regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"up regulation of o-orsellinic acid formation","type":"exact"},{"name":"up regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"up-regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"up-regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"up-regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"up-regulation of o-orsellinic acid formation","type":"exact"},{"name":"up-regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"upregulation of o-orsellinic acid anabolism","type":"exact"},{"name":"upregulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"upregulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"upregulation of o-orsellinic acid formation","type":"exact"},{"name":"upregulation of o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900700"}


id: PBO:0070993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 17","termid":"PBO:0070993"}


id: PBO:0063883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class M","termid":"PBO:0063883"}


id: PBO:0069689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 968, pseudogene","termid":"PBO:0069689"}


id: PBO:0061994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily D member 3","termid":"PBO:0061994"}


id: PBO:0065484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 3","termid":"PBO:0065484"}


id: PBO:0065680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase 2","termid":"PBO:0065680"}


id: PBO:0047968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAS1 related extracellular matrix 1","termid":"PBO:0047968"}


id: FYPO:0005235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is abolished.","definition_xrefs":["PomBase:mah","PMID:21945095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to chromatin at stalled replication fork","synonyms":[{"name":"abolished protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at stalled replication fork during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005235"}


id: PBO:0030655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_amiloride","termid":"PBO:0030655"}


id: PBO:0049123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor associated sorting protein family member 3","termid":"PBO:0049123"}


id: GO:0072573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction directed at lipopolysaccharide antigens.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"},{"relation_name":"is_a","term_name":"negative regulation of lipopolysaccharide-mediated signaling pathway","termid":"GO:0031665"},{"relation_name":"part_of","term_name":"cellular response to lipopolysaccharide","termid":"GO:0071222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"tolerance induction to lipopolysaccharide","synonyms":[{"name":"tolerance induction to LPS","type":"exact"},{"name":"tolerance induction to endotoxin","type":"broad"}],"termid":"GO:0072573"}


id: PBO:0060344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IXB","termid":"PBO:0060344"}


id: GO:0075271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fruiting body called zygosporangium is formed. A zygosporangium is a thick-walled structure in which spores are produced, and is characteristic of the Zygomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygosporangium development","termid":"GO:0075271"}


id: PBO:0029612
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_tapered_cell","termid":"PBO:0029612"}


id: MOD:00843
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms of or groups containing (15)N.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope labeled residue","termid":"MOD:00702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(15)N labeled residue","termid":"MOD:00843"}


id: GO:0004005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane cation-transporting ATPase (obsolete GO:0004005)","synonyms":[{"name":"plasma membrane cation-transporting ATPase","type":"exact"}],"termid":"GO:0004005"}


id: MONDO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infratentorial cancer","termid":"MONDO:0003107"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervicomedullary junction neoplasm","secondary_identifiers":["DOID:4707","MEDGEN:272453","NCIT:C5423","UMLS:C1332923"],"synonyms":[{"name":"cervicomedullary junction neoplasms","type":"exact"},{"name":"cervicomedullary junction tumor","type":"exact"},{"name":"cervicomedullary junction tumour","type":"exact"},{"name":"neoplasm of cervicomedullary junction","type":"exact"},{"name":"neoplasm of the cervicomedullary junction","type":"exact"},{"name":"tumor of cervicomedullary junction","type":"exact"},{"name":"tumor of the cervicomedullary junction","type":"exact"},{"name":"tumour of cervicomedullary junction","type":"exact"},{"name":"tumour of the cervicomedullary junction","type":"exact"}],"termid":"MONDO:0003108","xrefs":{"Monarch":{"xref_id":"0003108"}}}


id: PBO:0064704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 40","termid":"PBO:0064704"}


id: PBO:0083824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); cooperates with Duo1p and Pse1p to connect the DASH complex with the microtubules (MT); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; Ipl1p target for regulating kinetochore-MT attachments","termid":"PBO:0083824"}


id: MONDO:0006631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis of the foot generally affects the joint at the base of your big toe. It can cause your toe to: - become stiff over time, which can make it difficult and painful to walk – this is called hallux rigidus - become bent, which can lead to painful bunions (bony lumps at the base of your big toe) – this is called hallux valgus. Osteoarthritis of the mid-foot is also quite common, especially in older people, and may cause an obvious bony swelling (osteophyte) on the top of your mid-foot. Ankle osteoarthritis is least common and may cause your heel to move to an unusual angle.","definition_xrefs":["EFO:1000788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis","termid":"MONDO:0005178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, toe","secondary_identifiers":["MEDGEN:592722","UMLS:C0409929"],"termid":"MONDO:0006631","xrefs":{"Monarch":{"xref_id":"0006631"}}}


id: GO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that links the outer microtubule doublet of a 9+2 type ciliary or flagellar axoneme with the sheath that surrounds the central pair of microtubules. Composed of a stalk that attaches to each doublet microtubule and a globular structure (spoke head) that projects toward the central pair of microtubules.","definition_xrefs":["PMID:22118931","GOC:krc","PMID:25694453","PMID:34871179","PMID:9450971","ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"radial spoke","secondary_identifiers":["Wikipedia:Radial_spoke"],"termid":"GO:0001534"}


id: PBO:0059958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 3","termid":"PBO:0059958"}


id: MONDO:0006443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tenosynovial giant cell tumor (obsolete MONDO:0006443)","termid":"MONDO:0006443","xrefs":{"Monarch":{"xref_id":"0006443"}}}


id: SO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a GU dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000925 insert_GU (obsolete SO:0000925)","synonyms":[{"name":"insert GU","type":"exact"}],"termid":"SO:0000925"}


id: MONDO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brucellosis that involves an infection caused by Brucella melitensis [NCBITaxon:29459] in cattle, goats, sheep and humans. The disease has symptom fever, has symptom malaise, has symptom anorexia, has symptom limb pain and has symptom back pain.","definition_xrefs":["DOID:14456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brucellosis","termid":"MONDO:0005683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brucella melitensis brucellosis","secondary_identifiers":["ICD9:023.0","MEDGEN:549869","SCTID:427999003","UMLS:C0302362"],"termid":"MONDO:0001972","xrefs":{"Monarch":{"xref_id":"0001972"}}}


id: MONDO:1010751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, non-human animal","termid":"MONDO:1010129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa, cattle","secondary_identifiers":["OMIA:000340-9913"],"termid":"MONDO:1010751","xrefs":{"Monarch":{"xref_id":"1010751"}}}


id: MOD:01933
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links four L-lysine residues to form desmosine.","definition_xrefs":["RESID:AA0587","PubMed:14109939","PubMed:14109938","ChEBI:37629","PubMed:5839176","PubMed:13941623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmosine","synonyms":[{"name":"4-[(4S)-4-amino-4-carboxybutyl]-1-[(5S)-5-amino-5-carboxypentyl]-3,5-bis[(3S)-3-amino-3-carboxypropyl]pyridinium","type":"exact"},{"name":"6-[4-(4-amino-4-carboxybutyl)-3,5-bis(3-amino-3-carboxypropyl)pyridinio]norleucine","type":"exact"},{"name":"desmosine","type":"exact"}],"termid":"MOD:01933"}


id: PR:P36601
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein RAD51 homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.14c","secondary_identifiers":["UniProtKB:P36601"],"synonyms":[{"name":"RAD51 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC644.14c","type":"related"},{"name":"Spom972h-RAD51","type":"exact"},{"name":"rad51","type":"related"}],"termid":"PR:P36601"}


id: GO:0044020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H4)-arginine (position 3) = S-adenosyl-L-homocysteine + (histone H4)-N-methyl-arginine (position 3). This reaction is the addition of a methyl group to the arginine residue at position 3 of histone H4, producing histone H4R3me.","definition_xrefs":["GOC:mah","PMID:17898714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H4 methyltransferase activity","termid":"GO:0140939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674","GO:0140096","GO:0008276"],"is_obsolete":false,"name":"histone H4R3 methyltransferase activity","synonyms":[{"name":"histone H4KR3 methylation","type":"exact"},{"name":"histone H4R3 arginine methylase activity","type":"exact"},{"name":"histone methylase activity (H4-R3 specific)","type":"exact"},{"name":"histone methyltransferase activity (H4-R3 specific)","type":"exact"},{"name":"histone-arginine N-methyltransferase activity (H4-R3 specific)","type":"exact"}],"termid":"GO:0044020"}


id: MONDO:0100127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toxic bronchiolitis whereby a biospy has shown an obliteration of broncioles.","direct_ancestors":[{"relation_name":"is_a","term_name":"toxic bronchiolitis","termid":"MONDO:0100123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic bronchiolitis obliterans","secondary_identifiers":["SCTID:196027008","UMLS:C0340046","MEDGEN:573502"],"termid":"MONDO:0100127","xrefs":{"Monarch":{"xref_id":"0100127"}}}


id: GO:0090474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein processing achieved by the cleavage of a peptide bond after two consecutive arginine amino acid residues within a protein.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibasic protein processing","termid":"GO:0090472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"arg-arg specific dibasic protein processing","termid":"GO:0090474"}


id: RO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a colocalizes_with b if and only if  a is transiently or peripherally associated with b[GO].","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colocalizes_with","termid":"RO:0002325"}


id: PBO:0070333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 5","termid":"PBO:0070333"}


id: PBO:0062455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 128 pseudogene","termid":"PBO:0062455"}


id: GO:0006079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (1->6)-beta-D-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->6)-beta-D-glucan metabolic process","termid":"GO:0006077"},{"relation_name":"is_a","term_name":"beta-glucan catabolic process","termid":"GO:0051275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan catabolic process","synonyms":[{"name":"1,6-beta-D-glucan breakdown","type":"exact"},{"name":"1,6-beta-D-glucan catabolic process","type":"exact"},{"name":"1,6-beta-D-glucan catabolism","type":"exact"},{"name":"1,6-beta-D-glucan degradation","type":"exact"},{"name":"beta-1,6 glucan breakdown","type":"exact"},{"name":"beta-1,6 glucan catabolic process","type":"exact"},{"name":"beta-1,6 glucan catabolism","type":"exact"},{"name":"beta-1,6 glucan degradation","type":"exact"}],"termid":"GO:0006079"}


id: PBO:0063526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 7","termid":"PBO:0063526"}


id: PBO:0041679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule 4","termid":"PBO:0041679"}


id: FYECO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which myristic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ myristic acid","termid":"FYECO:0000044"}


id: GO:1901582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomeric RNA transcription from RNA pol II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomeric RNA transcription from RNA pol II promoter (obsolete GO:1901582)","synonyms":[{"name":"activation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"activation of telomeric RNA transcription from RNA pol II promoter","type":"narrow"},{"name":"positive regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"up-regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up-regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"upregulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"upregulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"}],"termid":"GO:1901582"}


id: PBO:0040226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 2","termid":"PBO:0040226"}


id: PR:O14037
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2C4.04c gene.","definition_xrefs":["UniProtKB:O14037","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0538 protein C2C4.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.04c","synonyms":[{"name":"Spom972h-SPAC2C4.04c","type":"exact"}],"termid":"PR:O14037"}


id: FYECO:0000099
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 72h-7days. This medium is then replaced with nitrogen containing rich medium and cells are allowed to grow for 4-7 days.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"72h-7days nitrogen starvation followed by 4-7 days recovery in rich medium","termid":"FYECO:0000099"}


id: GO:0030085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pigment protein complex that forms part of the photosystem II associated light-harvesting complex II; contains two proteins (usually about 28 and 27 kDa), and may contain a third; peripherally located relative to other LHC polypeptides.","definition_xrefs":["PMID:8825475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II, peripheral complex","termid":"GO:0009656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, peripheral complex, LHCIIb subcomplex","termid":"GO:0030085"}


id: MONDO:0018032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete constitutional neutropenia with extra-hematopoietic manifestations (obsolete MONDO:0018032)","secondary_identifiers":["Orphanet:331184"],"termid":"MONDO:0018032","xrefs":{"Monarch":{"xref_id":"0018032"}}}


id: MONDO:0017107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated cerebellar vermis agenesis","secondary_identifiers":["Orphanet:269203","MEDGEN:1814464","UMLS:C5680776","GARD:20990"],"termid":"MONDO:0017107","xrefs":{"Monarch":{"xref_id":"0017107"}}}


id: GO:1901654
data:
  {"annotated_genes":["SJAG_01162","SJAG_02960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104514],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[104693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"A response that results in a state of tolerance to ketone.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01162":null,"SJAG_02960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ketone","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990369"],"synonyms":[{"name":"process resulting in tolerance to ketone","type":"narrow"}],"termid":"GO:1901654","terms_by_termid":{"GO:0036245":null,"GO:0140041":null}}


id: PBO:0068873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 113, pseudogene","termid":"PBO:0068873"}


id: PBO:0060320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoneurin","termid":"PBO:0060320"}


id: PR:O94476
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10784:SF0","PRO:DNx","OMA:SCHPO04992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.09","secondary_identifiers":["UniProtKB:O94476"],"synonyms":[{"name":"Spom972h-EIF6","type":"exact"},{"name":"eIF-6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94476"}


id: GO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of heart contraction, changing the force with which blood is propelled.","definition_xrefs":["GOC:dph","PMID:10358008","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction","synonyms":[{"name":"cardiac inotropy","type":"exact"},{"name":"heart inotropy","type":"exact"}],"termid":"GO:0002026"}


id: PBO:0065459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 5","termid":"PBO:0065459"}


id: GO:1901381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of potassium ion transmembrane transport.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transport","termid":"GO:0043268"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of potassium ion transmembrane transport","secondary_identifiers":["Reactome:R-HSA-1296052","Reactome:R-HSA-1296041"],"synonyms":[{"name":"activation of potassium ion transmembrane transport","type":"narrow"},{"name":"positive regulation of potassium ion membrane transport","type":"exact"},{"name":"up regulation of potassium ion transmembrane transport","type":"exact"},{"name":"up-regulation of potassium ion transmembrane transport","type":"exact"},{"name":"upregulation of potassium ion transmembrane transport","type":"exact"}],"termid":"GO:1901381"}


id: PBO:0047673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filaggrin 2","termid":"PBO:0047673"}


id: PBO:0089686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial oxidoreductase-like protein, human OXLD1 ortholog","termid":"PBO:0089686"}


id: PBO:0050074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase","termid":"PBO:0050074"}


id: PBO:0076981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase 1, pseudogene","termid":"PBO:0076981"}


id: PBO:0073995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 3 pseudogene 2","termid":"PBO:0073995"}


id: GO:1901936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-caryophyllene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"beta-caryophyllene metabolic process","termid":"GO:1901935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-caryophyllene catabolic process","synonyms":[{"name":"beta-caryophyllene breakdown","type":"exact"},{"name":"beta-caryophyllene catabolism","type":"exact"},{"name":"beta-caryophyllene degradation","type":"exact"}],"termid":"GO:1901936"}


id: PBO:0065317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 40B (pseudogene)","termid":"PBO:0065317"}


id: FYPO:0007487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which insertion of the newly formed spindle pole body into the nuclear envelope does not occur during the second meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis II","termid":"FYPO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished new meiotic spindle pole body insertion into nuclear envelope during meiosis II","synonyms":[{"name":"abolished new meiotic SPB insertion into nuclear envelope during meiosis II","type":"exact"},{"name":"abolished new meiotic spindle pole body insertion into nuclear envelope during second meiotic nuclear division","type":"exact"},{"name":"abolished new spindle pole body insertion into nuclear envelope during meiosis II","type":"exact"}],"termid":"FYPO:0007487"}


id: FYPO:0007960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased during prophase.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000641","FYPO:0000337","FYPO:0000054","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of mitotic spindle elongation during prophase","termid":"FYPO:0007960"}


id: MONDO:0858989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive spastic paraplegia type 84 (obsolete MONDO:0858989)","termid":"MONDO:0858989","xrefs":{"Monarch":{"xref_id":"0858989"}}}


id: GO:0042325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"regulates","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphorylation","termid":"GO:0042325"}


id: PBO:0075481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily C member 1","termid":"PBO:0075481"}


id: GO:0070103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-6-mediated signaling pathway.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-6-mediated signaling pathway","termid":"GO:0070102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of interleukin-6-mediated signaling pathway","synonyms":[{"name":"regulation of IL-6-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-6-mediated signalling pathway","type":"exact"}],"termid":"GO:0070103"}


id: MONDO:0014586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal recessive inheritance of postsynaptic neuromuscular junction defects, early-onset progressive muscle weakness, and kinetic abnormalities of the AChR channel that has material basis in homozygous or compound heterozygous mutation in the CHRNE gene on chromosome 17p13.","definition_xrefs":["DOID:0110677","PMID:25792100","PMID:8755487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 4","termid":"MONDO:1040021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 4B","secondary_identifiers":["UMLS:C4225369","MEDGEN:904424","GARD:16087","OMIM:616324"],"synonyms":[{"name":"CMS4B","type":"exact"},{"name":"congenital myasthenic syndrome 4B fast-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 4B","type":"exact"},{"name":"myasthenic syndrome, congenital, 4B, FAST-channel","type":"related"}],"termid":"MONDO:0014586","xrefs":{"Monarch":{"xref_id":"0014586"}}}


id: PBO:0039768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 3 (Gill blood group)","termid":"PBO:0039768"}


id: PR:Q10164
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga2 gene.","definition_xrefs":["UniProtKB:Q10164","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.09c","synonyms":[{"name":"Spom972h-rga2","type":"exact"}],"termid":"PR:Q10164"}


id: MONDO:0018075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital defect characterized by failure of the neural tube to close completely; this results in the presence of openings in the brain or spinal cord. Examples of neural tube defects include encephalocele and spina bifida.","definition_xrefs":["NCIT:C84923"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","termid":"MONDO:0015219"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic nervous system disorder (obsolete MONDO:0019117)","termid":"MONDO:0019117"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"neural tube defect","secondary_identifiers":["ICD9:742.8","MEDGEN:18009","DOID:0080074","GARD:18796","Orphanet:3388","MESH:D009436","SCTID:253098009","UMLS:C0027794"],"synonyms":[{"name":"NTD","type":"exact"},{"name":"spinal dysraphism","type":"exact"}],"termid":"MONDO:0018075","xrefs":{"Monarch":{"xref_id":"0018075"}}}


id: PBO:0079285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 4","termid":"PBO:0079285"}


id: GO:0008927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannonate = 2-dehydro-3-deoxy-D-gluconate + H2O.","definition_xrefs":["RHEA:20097","EC:4.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"mannonate dehydratase activity","secondary_identifiers":["MetaCyc:MANNONDEHYDRAT-RXN","KEGG_REACTION:R05606"],"synonyms":[{"name":"D-mannonate hydro-lyase (2-dehydro-3-deoxy-D-gluconate-forming)","type":"related"},{"name":"D-mannonate hydro-lyase activity","type":"related"},{"name":"D-mannonate hydrolyase activity","type":"related"},{"name":"altronate hydrolase activity","type":"related"},{"name":"altronic hydro-lyase activity","type":"related"},{"name":"mannonate hydrolyase activity","type":"related"},{"name":"mannonic hydrolase activity","type":"related"}],"termid":"GO:0008927"}


id: PR:O94632
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- egt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergothioneine biosynthesis protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.01","synonyms":[{"name":"Spom972h-egt1","type":"exact"},{"name":"meiotically up-regulated gene 158 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94632"}


id: GO:1904262
data:
  {"annotated_genes":["SJAG_05346","SJAG_03486","SJAG_02765","SJAG_00824","SJAG_04910","SJAG_01983","SJAG_03089","SJAG_01184","SJAG_03355","SJAG_03678","SJAG_00991","SJAG_00457","SJAG_00875","SJAG_04249","SJAG_03072","SJAG_02231","SJAG_03799","SJAG_00169","SJAG_00209","SJAG_01142","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87537,92832,93679,95602,98378,99072,100941,102496,104601,106617,106864,108725,109135,110408,112601,113418,114022,115574,115929,116486,117665],"is_not":false,"summary":null,"term":"GO:1904262"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GOC:TermGenie","PMID:25366275","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of TOR signaling","termid":"GO:0032007"},{"relation_name":"is_a","term_name":"regulation of TORC1 signaling","termid":"GO:1903432"},{"relation_name":"negatively_regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03799":null,"SJAG_04249":null,"SJAG_04910":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of TORC1 signal transduction","type":"exact"},{"name":"down regulation of TORC1 signaling","type":"exact"},{"name":"down-regulation of TORC1 signal transduction","type":"exact"},{"name":"down-regulation of TORC1 signaling","type":"exact"},{"name":"downregulation of TORC1 signal transduction","type":"exact"},{"name":"downregulation of TORC1 signaling","type":"exact"},{"name":"inhibition of TORC1 signal transduction","type":"narrow"},{"name":"inhibition of TORC1 signaling","type":"narrow"},{"name":"negative regulation of TORC1 signal transduction","type":"exact"}],"termid":"GO:1904262","terms_by_termid":{"GO:1904262":null}}


id: FYPO:0004527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which any process of regulation of transcription is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulation phenotype during vegetative growth","termid":"FYPO:0001335"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of transcription during vegetative growth","secondary_identifiers":["FYPO:0006471"],"synonyms":[{"name":"abnormal regulation of cellular transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal regulation of transcription during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal transcriptional control during vegetative growth","type":"broad"}],"termid":"FYPO:0004527"}


id: PBO:0014268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog, congenital disorders of glycosylation","termid":"PBO:0014268"}


id: PBO:0003276
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.9","termid":"PBO:0003276"}


id: PBO:0086463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metal transporter involved in mitochondrial iron accumulation; MMT2 has a paralog, MMT1, that arose from the whole genome duplication","termid":"PBO:0086463"}


id: MONDO:0009578
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84993],"is_not":false,"summary":null,"term":"MONDO:0009578"}]},"cv_name":"mondo","definition":"Neurocutaneous melanocytosis (NCM) is a rare congenital neurological disorder characterized by abnormal aggregations of nevomelanocytes within the central nervous system (leptomeningeal melanocytosis) associated with large or giant congenital melanocytic nevi (CMN). NCM can be asymptomatic or present as variably severe and progressive neurological impairment, sometimes resulting in death.","definition_xrefs":["Orphanet:2481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system benign neoplasm","termid":"MONDO:0000648"},{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"neurocutaneous melanocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:7186","MEDGEN:154259","icd11.foundation:403221860","MESH:C537387","OMIM:249400","UMLS:C0544862","NANDO:2200827"],"synonyms":[{"name":"NCM","type":"exact"},{"name":"NCMS","type":"related"},{"name":"Neuromelanosis","type":"related"},{"name":"melanosis, neurocutaneous","type":"related"},{"name":"neurocutaneous melanosis","type":"exact"},{"name":"neurocutaneous melanosis syndrome","type":"related"},{"name":"neurocutaneous melanosis, somatic","type":"exact"}],"termid":"MONDO:0009578","terms_by_termid":{"MONDO:0009578":null},"xrefs":{"Monarch":{"xref_id":"0009578"}}}


id: PBO:0082852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coproporphyrinogen III oxidase; oxygen-requiring enzyme that catalyzes sixth step in heme biosynthetic pathway; transcription is repressed by oxygen and heme (via Rox1p and Hap1p); human homolog CPOX can complement yeast mutant and allow growth of haploid null after sporulation of a heterozygous diploid","termid":"PBO:0082852"}


id: PBO:0040082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase D","termid":"PBO:0040082"}


id: GO:0160220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + ATP + D-alanine = ADP + D-alanyl-(R)-lactate + phosphate.","definition_xrefs":["RHEA:37347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-oxygen bonds","termid":"GO:0016875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"D-alanine-(R)-lactate ligase activity","secondary_identifiers":["EC:6.1.2.1","KEGG_REACTION:R09588","MetaCyc:RXN-11298"],"synonyms":[{"name":"D-alanyl-D-lactate ligase activity","type":"exact"}],"termid":"GO:0160220"}


id: PBO:0016554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3, unknown biological role (predicted)","termid":"PBO:0016554"}


id: RO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A general relation between a neuron and some structure in which it either chemically synapses to some target or in which it receives (chemical) synaptic input.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_synaptic_terminal_in","termid":"RO:0002130"}


id: PBO:0051364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-25 (pseudogene)","termid":"PBO:0051364"}


id: MONDO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deposition of calcium in the tissues. It may be the result of a metabolic disorder or long-standing infection, or it may be associated with the presence of cancer.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium metabolic disease","termid":"MONDO:0005557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"calcinosis","secondary_identifiers":["HP:0003761","icd11.foundation:1374802956","NCIT:C3672","SCTID:6595006","ICD9:275.49","DOID:182","MESH:D002114","UMLS:C0006663","MEDGEN:709"],"synonyms":[{"name":"calcification","type":"exact"},{"name":"calcium deposit(s)","type":"exact"},{"name":"deposit(s), calcium","type":"exact"},{"name":"macrocalcification","type":"exact"},{"name":"pathologic calcification","type":"exact"},{"name":"pathologically calcified structure","type":"exact"}],"termid":"MONDO:0002123","xrefs":{"Monarch":{"xref_id":"0002123"}}}


id: GO:2000796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any Notch signaling pathway that is involved in negative regulation of venous endothelial cell fate commitment.","definition_xrefs":["PMID:11585794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"negative regulation of venous endothelial cell fate commitment","termid":"GO:2000788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling pathway involved in negative regulation of venous endothelial cell fate commitment","synonyms":[{"name":"N signaling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch receptor signaling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch receptor signalling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch signalling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch-receptor signaling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch-receptor signalling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"}],"termid":"GO:2000796"}


id: PBO:0047478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 5","termid":"PBO:0047478"}


id: PBO:0027590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0027590"}


id: PBO:0070216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 148 pseudogene","termid":"PBO:0070216"}


id: PBO:0033763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_chromosome_arms","termid":"PBO:0033763"}


id: GO:0003139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the lateral mesoderm into the area which will form the majority of the mesodermal component of the right ventricle, arterial pole (outflow tract) and venous pole (inflow tract).","definition_xrefs":["GOC:rl","PMID:17276708","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart field specification","termid":"GO:0003128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary heart field specification","synonyms":[{"name":"SHF specification","type":"exact"},{"name":"anterior heart field specification","type":"narrow"},{"name":"second heart field specification","type":"exact"}],"termid":"GO:0003139"}


id: PBO:0112984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Accessory subunit of DNA polymerase zeta (pol zeta); involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair; may be involved in meiosis; forms a complex with Rev3p, Pol31p and Pol32p","termid":"PBO:0112984"}


id: PBO:0030372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cobalt","termid":"PBO:0030372"}


id: MONDO:0009525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The distal limb deficiencies-micrognathia syndrome is characterized by the combination of symmetric severe distal limb reduction deficiencies affecting all four limbs (oligodactyly), microretrognathia, and microstomia with or without cleft palate.","definition_xrefs":["Orphanet:1307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"split hand-foot malformation","termid":"MONDO:0016576"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 10","termid":"MONDO:0016961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand-foot malformation 3","secondary_identifiers":["NCIT:C75121","UMLS:C1838652","OMIM:246560","SCTID:722429003","MEDGEN:325070","MESH:C565437","GARD:3252","DOID:0090025"],"synonyms":[{"name":"10q24 microduplication syndrome","type":"exact"},{"name":"Buttiens Fryns syndrome","type":"related"},{"name":"Buttiens-Fryns syndrome","type":"exact"},{"name":"SHFM3","type":"exact"},{"name":"Shsf3","type":"related"},{"name":"chromosome 10Q24 Duplication syndrome","type":"related"},{"name":"chromosome 10q24 duplication syndrome","type":"exact"},{"name":"distal limb deficiencies with micrognathia","type":"exact"},{"name":"distal limb deficiencies-micrognathia syndrome","type":"related"},{"name":"limb deficiencies distal with micrognathia","type":"related"},{"name":"limb deficiencies, distal, with micrognathia","type":"related"},{"name":"split hand-foot malformation 3","type":"exact"},{"name":"split hand-foot malformation type 3","type":"exact"},{"name":"split-hand/foot malformation 3","type":"related"},{"name":"split-hand/foot malformation 3, gene duplication syndrome","type":"exact"},{"name":"split-hand/foot malformation type 3","type":"exact"}],"termid":"MONDO:0009525","xrefs":{"Monarch":{"xref_id":"0009525"}}}


id: FYPO:0004847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects DNA-dependent transcription.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression phenotype","termid":"FYPO:0000142"},{"relation_name":"is_a","term_name":"RNA metabolism phenotype","termid":"FYPO:0000294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"transcription phenotype","synonyms":[{"name":"fission yeast transcription phenotype","type":"exact"}],"termid":"FYPO:0004847"}


id: PATO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's having odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorous","termid":"PATO:0001331"}


id: CHEBI:52289
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wortmannin","termid":"CHEBI:52289"}


id: PBO:0078215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-8","termid":"PBO:0078215"}


id: PBO:0075431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member A2","termid":"PBO:0075431"}


id: PBO:0028120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_lateral_cortical_node,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028120"}


id: GO:1990915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an ascospore wall.","definition_xrefs":["PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cell wall","termid":"GO:0005199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of ascospore wall","termid":"GO:1990915"}


id: GO:0033456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0060090","GO:0003723"],"is_obsolete":false,"name":"GCG codon-amino acid adaptor activity","synonyms":[{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033456"}


id: PBO:0052185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 17","termid":"PBO:0052185"}


id: PR:Q9UST8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease H1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03401","PRO:DNx","PANTHER:PTHR10642:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.06c","secondary_identifiers":["UniProtKB:Q9UST8"],"synonyms":[{"name":"RNase H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNASEH1","type":"exact"}],"termid":"PR:Q9UST8"}


id: GO:0061149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to the shaping of the ureter. The ureter is a tube that extends from the kidney to the bladder.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in ureter morphogenesis (obsolete GO:0061149)","synonyms":[{"name":"BMP signalling pathway involved in ureter morphogenesis","type":"exact"}],"termid":"GO:0061149"}


id: GO:0030329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prenylcysteine, 3-methyl-2-buten-1-yl-cysteine, a derivative of the amino acid cysteine formed by the covalent addition of a prenyl residue.","definition_xrefs":["GOC:ai","PMID:16627894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylcysteine metabolic process","synonyms":[{"name":"prenylcysteine metabolism","type":"exact"}],"termid":"GO:0030329"}


id: GO:0042644
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a chloroplast to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid nucleoid","termid":"GO:0042646"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast nucleoid","termid":"GO:0042644"}


id: PBO:0076008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stimulator of interferon response cGAMP interactor 1","termid":"PBO:0076008"}


id: PBO:0083035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase; required for biosynthesis of isopentenyladenosine in mitochondrial and cytoplasmic tRNAs; also has a role in tRNA gene-mediated silencing; gene encodes two isozymic forms; converts to a prion form, prion conversion contributes to azole antifungal resistance by upregulating ergosterol biosynthesis; homolog of human TRIT1, a mutation in which is associated with severe combined respiratory chain defects","termid":"PBO:0083035"}


id: MONDO:0019011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 1 (CMT1) is a group of autosomal dominant demyelinating peripheral neuropathies characterized by distal weakness and atrophy, sensory loss, foot deformities, and slow nerve conduction velocity.","definition_xrefs":["Orphanet:65753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1","secondary_identifiers":["GARD:12433","NANDO:1200017","UMLS:C0751036","DOID:0050538","MEDGEN:155486","SCTID:398040009"],"synonyms":[{"name":"CMT1","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1","type":"exact"},{"name":"Charcot-Marie-Tooth type 1","type":"related"},{"name":"autosomal dominant demyelinating Charcot-Marie-Tooth disease","type":"exact"},{"name":"hereditary motor and sensory neuropathy type 1","type":"exact"}],"termid":"MONDO:0019011","xrefs":{"Monarch":{"xref_id":"0019011"}}}


id: GO:0043069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of programmed cell death","secondary_identifiers":["GO:0043072"],"synonyms":[{"name":"down regulation of programmed cell death","type":"exact"},{"name":"down-regulation of programmed cell death","type":"exact"},{"name":"downregulation of programmed cell death","type":"exact"},{"name":"inhibition of programmed cell death","type":"narrow"},{"name":"negative regulation of non-apoptotic programmed cell death","type":"narrow"}],"termid":"GO:0043069"}


id: PBO:0002094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb1 (predicted)","termid":"PBO:0002094"}


id: PBO:0090880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cruciform-cutting endonuclease Cce1","termid":"PBO:0090880"}


id: GO:0034935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dichlorotoluene + NADH + H+ + O2 = 4,6-dichloro-3-methyl-cis-1,2-dihydroxycyclohexa-3,5-diene + NAD+.","definition_xrefs":["UM-BBD_reactionID:r0957"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrachlorobenzene dioxygenase activity (obsolete GO:0034935)","termid":"GO:0034935"}


id: GO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (pseudohyphal growth) (obsolete GO:0000191)","synonyms":[{"name":"activation of MAPKKK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000191"}


id: PATO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A peramorphic growth quality which is due to an increased rate.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peramorphic growth","termid":"PATO:0001752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accelerated growth","termid":"PATO:0001753"}


id: GO:0042472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the inner ear are generated and organized. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"ear morphogenesis","termid":"GO:0042471"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear morphogenesis","termid":"GO:0042472"}


id: PBO:0041432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 89","termid":"PBO:0041432"}


id: MONDO:0030027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 6","secondary_identifiers":["MEDGEN:1711112","OMIM:618866","DOID:0081295","UMLS:C5394329"],"synonyms":[{"name":"ETM6","type":"exact"},{"name":"TREMOR, HEREDITARY ESSENTIAL, 6","type":"exact"},{"name":"tremor, hereditary essential, 6","type":"exact"}],"termid":"MONDO:0030027","xrefs":{"Monarch":{"xref_id":"0030027"}}}


id: PBO:0081251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF22 antisense RNA 1","termid":"PBO:0081251"}


id: PBO:0052894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-5","termid":"PBO:0052894"}


id: GO:1900516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xylose catabolic process to ethanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of xylose catabolic process to ethanol","termid":"GO:1900515"},{"relation_name":"is_a","term_name":"negative regulation of fermentation","termid":"GO:1901003"},{"relation_name":"negatively_regulates","term_name":"D-xylose catabolic process to ethanol","termid":"GO:0044577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of xylose catabolic process to ethanol","synonyms":[{"name":"down regulation of xylose catabolic process to ethanol","type":"exact"},{"name":"down regulation of xylose catabolism to ethanol","type":"exact"},{"name":"down-regulation of xylose catabolic process to ethanol","type":"exact"},{"name":"down-regulation of xylose catabolism to ethanol","type":"exact"},{"name":"downregulation of xylose catabolic process to ethanol","type":"exact"},{"name":"downregulation of xylose catabolism to ethanol","type":"exact"},{"name":"inhibition of xylose catabolic process to ethanol","type":"narrow"},{"name":"inhibition of xylose catabolism to ethanol","type":"exact"},{"name":"negative regulation of xylose catabolism to ethanol","type":"exact"}],"termid":"GO:1900516"}


id: PBO:0085336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoenolpyruvate carboxykinase; key enzyme in gluconeogenesis, catalyzes early reaction in carbohydrate biosynthesis, glucose represses transcription and accelerates mRNA degradation, regulated by Mcm1p and Cat8p, located in the cytosol","termid":"PBO:0085336"}


id: MONDO:0043544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection acquired in a hospital or other healthcare setting.","definition_xrefs":["NCIT:C115164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"},{"relation_name":"is_a","term_name":"iatrogenic disease","termid":"MONDO:0043543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nosocomial infection","secondary_identifiers":["MESH:D003428","SCTID:19168005","UMLS:C0205721","MEDGEN:61441"],"synonyms":[{"name":"Cross infections","type":"related"},{"name":"HAI","type":"broad"},{"name":"Healthcare associated infection","type":"related"},{"name":"Healthcare associated infections","type":"related"},{"name":"Healthcare-associated infection","type":"exact"},{"name":"associated infection, Healthcare","type":"related"},{"name":"associated infections, Healthcare","type":"related"},{"name":"health care associated infection","type":"related"},{"name":"health care associated infections","type":"related"},{"name":"hospital infection","type":"related"},{"name":"hospital infections","type":"related"},{"name":"hospital-acquired infection","type":"exact"},{"name":"hospital-onset infection","type":"exact"},{"name":"infection, Cross","type":"related"},{"name":"infection, Healthcare associated","type":"related"},{"name":"infection, hospital","type":"related"},{"name":"infection, nosocomial","type":"related"},{"name":"infections, Cross","type":"related"},{"name":"infections, Healthcare associated","type":"related"},{"name":"infections, hospital","type":"related"},{"name":"infections, nosocomial","type":"related"},{"name":"nosocomial infection","type":"exact"},{"name":"nosocomial infections","type":"related"},{"name":"nosocomial infectious disease","type":"exact"}],"termid":"MONDO:0043544","xrefs":{"Monarch":{"xref_id":"0043544"}}}


id: MONDO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuropathy arising from inflammation of one or more nerves.","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuritis","secondary_identifiers":["MEDGEN:14344","SCTID:128192007","ICD9:729.2","NCIT:C116381","MESH:D009443","SCTID:84299009","UMLS:C0027813","DOID:1803"],"synonyms":[{"name":"nerve inflammation","type":"exact"},{"name":"peripheral neuritis","type":"exact"}],"termid":"MONDO:0002122","xrefs":{"Monarch":{"xref_id":"0002122"}}}


id: PBO:0034132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_modifier","termid":"PBO:0034132"}


id: RO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connecting_branch_of","termid":"RO:0002252"}


id: PBO:0091472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrose alpha-glucosidase Suc2","termid":"PBO:0091472"}


id: PBO:0076033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STK32A antisense RNA 1","termid":"PBO:0076033"}


id: PBO:0060711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 8","termid":"PBO:0060711"}


id: PATO:0002473
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition to spontaneously arise.","definition_xrefs":["PATOC:NV"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, spontaneous","termid":"PATO:0002473"}


id: GO:0035395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of chemokine (C-X-C motif) ligand 9.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 9 production","termid":"GO:0035394"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-X-C motif) ligand 9 production","termid":"GO:0035393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemokine (C-X-C motif) ligand 9 production","synonyms":[{"name":"negative regulation of CXCL9 production","type":"exact"},{"name":"negative regulation of MIG production","type":"exact"}],"termid":"GO:0035395"}


id: PR:P78798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal targeting signal 2 receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01952","PANTHER:PTHR22850:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal 2 receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.01","secondary_identifiers":["UniProtKB:P78798"],"synonyms":[{"name":"PTS2 receptor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PEX7","type":"exact"},{"name":"peroxin-7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78798"}


id: GO:0061147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the endocardial endothelium over time, from its initial formation to the mature structure. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelium development","termid":"GO:0003158"},{"relation_name":"part_of","term_name":"endocardium development","termid":"GO:0003157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial endothelium development","termid":"GO:0061147"}


id: GO:0004287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Pro-Xaa > Ala-Xaa in oligopeptides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete prolyl oligopeptidase activity (obsolete GO:0004287)","synonyms":[{"name":"endoprolylpeptidase activity","type":"related"},{"name":"post-proline cleaving enzyme activity","type":"related"},{"name":"post-proline endopeptidase activity","type":"related"},{"name":"proline endopeptidase activity","type":"related"},{"name":"proline-specific endopeptidase activity","type":"related"},{"name":"prolyl endopeptidase activity","type":"related"},{"name":"prolyl oligopeptidase activity","type":"exact"}],"termid":"GO:0004287"}


id: GO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of the cumulus surrounding the oocyte including change in morphology due to proliferation and dispersion of cumulus cells.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"antral ovarian follicle growth","termid":"GO:0001547"},{"relation_name":"part_of","term_name":"fused antrum stage","termid":"GO:0048165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian cumulus expansion","synonyms":[{"name":"ovarian cumulus growth","type":"related"}],"termid":"GO:0001550"}


id: MONDO:0010482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked parkinsonism-spasticity syndrome is a rare genetic neurological disorder characterized by parkinsonian features (including resting or action tremor, cogwheel rigidity, hypomimia and bradykinesia) associated with variably penetrant spasticity, hyperactive deep tendon reflexes and Babinski sign.","definition_xrefs":["Orphanet:363654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"},{"relation_name":"is_a","term_name":"ATP6AP2-related disorder","termid":"MONDO:0100146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked parkinsonism-spasticity syndrome","secondary_identifiers":["MEDGEN:813052","UMLS:C3806722","OMIM:300911","DOID:0112105","GARD:17567"],"synonyms":[{"name":"PARKINSONISM with spasticity, X-linked","type":"related"},{"name":"Parkinsonism with spasticity, X-linked, X-linked recessive","type":"exact"},{"name":"XPDS","type":"exact"}],"termid":"MONDO:0010482","xrefs":{"Monarch":{"xref_id":"0010482"}}}


id: MOD:01366
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:478#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescein-5-thiosemicarbazide","termid":"MOD:00626"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein-5-thiosemicarbazide - site K","synonyms":[{"name":"FTC","type":"related"},{"name":"fluorescein-5-thiosemicarbazide","type":"related"}],"termid":"MOD:01366"}


id: GO:1903807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-threonine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:23895341","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"threonine transport","termid":"GO:0015826"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-threonine import across plasma membrane","secondary_identifiers":["GO:0036231"],"synonyms":[{"name":"L-threonine import","type":"broad"},{"name":"L-threonine import into cell","type":"exact"},{"name":"L-threonine uptake","type":"exact"}],"termid":"GO:1903807"}


id: PBO:0071442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 48","termid":"PBO:0071442"}


id: PBO:0027064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_localization_phenotype","termid":"PBO:0027064"}


id: PATO:0000892
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female fertility quality inhering in a female by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"PATO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female sterile","synonyms":[{"name":"female infertile","type":"related"}],"termid":"PATO:0000892"}


id: PBO:0054826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2239","termid":"PBO:0054826"}


id: MONDO:0023023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lacrimal sac in a newborn due to blocked drainage of tears or infection.","definition_xrefs":["NCIT:C116819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dacryocystitis","termid":"MONDO:0004926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neonatal dacryocystitis","secondary_identifiers":["MEDGEN:542581","SCTID:23735003","UMLS:C0270178"],"synonyms":[{"name":"Neonatal Dacryocystitis","type":"related"},{"name":"Neonatal dacryocystitis","type":"related"},{"name":"neonatal dacryocystitis","type":"exact"}],"termid":"MONDO:0023023","xrefs":{"Monarch":{"xref_id":"0023023"}}}


id: GO:0033357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-arabinose, arabino-pentose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose biosynthetic process","termid":"GO:0019567"},{"relation_name":"is_a","term_name":"L-arabinose metabolic process","termid":"GO:0046373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"L-arabinose biosynthetic process","synonyms":[{"name":"L-arabinose anabolism","type":"exact"},{"name":"L-arabinose biosynthesis","type":"exact"},{"name":"L-arabinose formation","type":"exact"},{"name":"L-arabinose synthesis","type":"exact"}],"termid":"GO:0033357"}


id: PBO:0065439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 12","termid":"PBO:0065439"}


id: PBO:0027109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_protein_aggregate_level_during_cellular_response_to_heat","termid":"PBO:0027109"}


id: GO:0061243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric renal vesicle are generated and organized. The renal vesicle is the primordial structure of the mesonephric nephron epithelium, and is formed by the condensation of mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle morphogenesis","termid":"GO:0072077"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric renal vesicle morphogenesis","termid":"GO:0061243"}


id: MONDO:0004420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare tumor characterized by malignant transformation of an eccrine spiradenoma of the breast.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant spiradenoma","termid":"MONDO:0004412"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"breast malignant eccrine spiradenoma","secondary_identifiers":["DOID:7983","NCIT:C5180","MEDGEN:277329","UMLS:C1334565"],"synonyms":[{"name":"breast malignant spiradenoma","type":"exact"},{"name":"malignant breast eccrine spiradenoma","type":"exact"},{"name":"malignant eccrine spiradenoma of breast","type":"exact"},{"name":"malignant eccrine spiradenoma of the breast","type":"exact"},{"name":"malignant spiradenoma of breast","type":"exact"}],"termid":"MONDO:0004420","xrefs":{"Monarch":{"xref_id":"0004420"}}}


id: PBO:0030639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_fructose_carbon_source","termid":"PBO:0030639"}


id: PBO:0064803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 1A","termid":"PBO:0064803"}


id: FYPO:0001168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ATPase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal ATPase activity","termid":"FYPO:0001167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"decreased ATPase activity","synonyms":[{"name":"reduced ATPase activity","type":"exact"}],"termid":"FYPO:0001168"}


id: GO:0071726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diacylated bacterial lipopeptide stimulus.","definition_xrefs":["PMID:12524386","PMID:2757794","PMID:12077222","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to bacterial lipopeptide","termid":"GO:0071221"},{"relation_name":"is_a","term_name":"response to diacyl bacterial lipopeptide","termid":"GO:0071724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diacyl bacterial lipopeptide","synonyms":[{"name":"cellular response to diacylated bacterial lipoprotein","type":"exact"}],"termid":"GO:0071726"}


id: PBO:0055830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich colipase like 1","termid":"PBO:0055830"}


id: GO:0055081
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055064"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of monoatomic anions within an organism or cell. Monatomic anions (also called simple anions) are anions consisting of exactly one atom.","definition_xrefs":["GOC:jid","GOC:mah","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion homeostasis","termid":"GO:0050801"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monoatomic anion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"anion homeostasis","type":"broad"}],"termid":"GO:0055081","terms_by_termid":{"GO:0055064":null}}


id: GO:1990160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of the helicase loading complex DnaB-DnaC, replication restart proteins Rep and PriC, and associated DNA. Involved in the restart of DNA replication after a stalled replication fork has been repaired.","definition_xrefs":["GOC:bhm","PMID:19941825","PMID:8663105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-primosome complex","termid":"GO:1990099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"DnaB-DnaC-Rep-PriC complex","synonyms":[{"name":"DnaB-DnaC-Rep-PriC preprimosome","type":"exact"},{"name":"phi-X174-type preprimosome","type":"related"}],"termid":"GO:1990160"}


id: PBO:0061967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AG member 1","termid":"PBO:0061967"}


id: GO:1904104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in gastrulation.","definition_xrefs":["GOC:dph","GO_REF:0000058","GOC:TermGenie","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in gastrulation","synonyms":[{"name":"down regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"down-regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"downregulation of convergent extension involved in gastrulation","type":"exact"},{"name":"inhibition of convergent extension involved in gastrulation","type":"narrow"}],"termid":"GO:1904104"}


id: PATO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000784 excretory function value (obsolete PATO:0000784)","termid":"PATO:0000784"}


id: PBO:0074320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD9 intronic transcript 1","termid":"PBO:0074320"}


id: MONDO:0006768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Narrowing of the pyloric lumen caused either by hypertrophy of the surrounding muscles or tissue scarring due to a chronic peptic ulcer.","definition_xrefs":["NCIT:C34966"],"gene_count":0,"genotype_count":0,"name":"obsolete gastric outlet obstruction (obsolete MONDO:0006768)","termid":"MONDO:0006768","xrefs":{"Monarch":{"xref_id":"0006768"}}}


id: GO:0000233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cytoplasm during interphase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic interphase chromosome (obsolete GO:0000233)","synonyms":[{"name":"cytoplasmic interphase chromosome","type":"exact"}],"termid":"GO:0000233"}


id: GO:0050352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + trimethylamine N-oxide = dimethylamine + formaldehyde.","definition_xrefs":["EC:4.1.2.32","RHEA:20217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"trimethylamine-oxide aldolase activity","secondary_identifiers":["UM-BBD_reactionID:r1409","MetaCyc:TRIMETHYLAMINE-OXIDE-ALDOLASE-RXN","KEGG_REACTION:R02512"],"synonyms":[{"name":"trimethylamine N-oxide aldolase activity","type":"related"},{"name":"trimethylamine N-oxide demethylase activity","type":"related"},{"name":"trimethylamine N-oxide formaldehyde-lyase activity","type":"related"},{"name":"trimethylamine-N-oxide formaldehyde-lyase (dimethylamine-forming)","type":"related"},{"name":"trimethylamine-N-oxide formaldehyde-lyase activity","type":"related"}],"termid":"GO:0050352"}


id: GO:0018136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reduction of a peptide-linked thiazoline to thiazole.","definition_xrefs":["PMID:19058272","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"peptidyl-thiazoline dehydrogenase activity","termid":"GO:0018136"}


id: PBO:0076270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntabulin","termid":"PBO:0076270"}


id: PBO:0004094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic RNA-binding protein 1","termid":"PBO:0004094"}


id: MONDO:1010284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"},{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allergic rhinitis, non-human animal","secondary_identifiers":["OMIA:000027"],"termid":"MONDO:1010284","xrefs":{"Monarch":{"xref_id":"1010284"}}}


id: GO:0033956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-[beta-D-apiofuranosyl-(1->6)-beta-D-glucopyranosyloxy]isoflavonoid + H2O = a 7-hydroxyisoflavonoid + beta-D-apiofuranosyl-(1->6)-D-glucose.","definition_xrefs":["EC:3.2.1.161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"beta-apiosyl-beta-glucosidase activity","secondary_identifiers":["MetaCyc:RXN-9156","RHEA:21488"],"synonyms":[{"name":"7-[beta-D-apiofuranosyl-(1->6)-beta-D-glucopyranosyloxy]isoflavonoid beta-D-apiofuranosyl-(1->6)-D-glucohydrolase activity","type":"related"},{"name":"furcatin hydrolase activity","type":"related"},{"name":"isoflavonoid 7-O-beta-apiosyl-glucoside beta-glucosidase activity","type":"related"},{"name":"isoflavonoid-7-O-beta[D-apiosyl-(1->6)-beta-D-glucoside] disaccharidase activity","type":"related"}],"termid":"GO:0033956"}


id: GO:0102946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + soyasapogenol E = UDP + a soyasapogenol E monoglucoside.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete soyasapogenol E UDP-glucosyltransferase activity (obsolete GO:0102946)","termid":"GO:0102946"}


id: PBO:0012006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1102, mitochondrial ribosomal protein Rsm2202, fusion protein (predicted)","termid":"PBO:0012006"}


id: PBO:0050406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 8","termid":"PBO:0050406"}


id: FYPO:0000135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in the plasma membrane is abnormal.","definition_xrefs":["GO:0097036","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane organization","termid":"FYPO:0000813"},{"relation_name":"is_a","term_name":"abnormal sterol distribution","termid":"FYPO:0007677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal plasma membrane sterol distribution","synonyms":[{"name":"abnormal plasma membrane sterol distribution during mitotic cell cycle","type":"related"},{"name":"abnormal plasma membrane sterol distribution during vegetative growth","type":"exact"},{"name":"abnormal regulation of plasma membrane sterol distribution","type":"exact"},{"name":"localization defects, sterol distribution defects","type":"exact"}],"termid":"FYPO:0000135"}


id: PBO:0045193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 6","termid":"PBO:0045193"}


id: MONDO:0011720
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86337,86338],"is_not":false,"summary":null,"term":"MONDO:0011720"}]},"cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the SLC26A8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070168","OMIM:606766","GARD:18399","MEDGEN:1648302","MESH:C564665","UMLS:C4721889"],"synonyms":[{"name":"SLC26A8 azoospermia","type":"exact"},{"name":"SPGF3","type":"related"},{"name":"azoospermia caused by mutation in SLC26A8","type":"exact"},{"name":"spermatogenic failure 3","type":"exact"},{"name":"spermatogenic failure type 3","type":"exact"}],"termid":"MONDO:0011720","terms_by_termid":{"MONDO:0011720":null},"xrefs":{"Monarch":{"xref_id":"0011720"}}}


id: GO:0042537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzene, C6H6, a volatile, very inflammable liquid, contained in the naphtha produced by the destructive distillation of coal, from which it is separated by fractional distillation, or any of its derivatives.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene-containing compound metabolic process","synonyms":[{"name":"benzene and derivative metabolic process","type":"exact"},{"name":"benzene and derivative metabolism","type":"exact"},{"name":"benzene-containing compound metabolism","type":"exact"}],"termid":"GO:0042537"}


id: PBO:0088047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme variant; involved in error-free postreplication repair; forms a heteromeric complex with Ubc13p, an active ubiquitin-conjugating enzyme; cooperates with chromatin-associated RING finger proteins, Rad18p and Rad5p; protein abundance increases in response to DNA replication stress","termid":"PBO:0088047"}


id: PBO:0027137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation_during_glucose_starvation","termid":"PBO:0027137"}


id: FYPO:0009098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing mannitol as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on mannitol carbon source","synonyms":[{"name":"increased growth on mannitol carbon source","type":"broad"},{"name":"increased vegetative cell growth on mannitol carbon source","type":"exact"}],"termid":"FYPO:0009098"}


id: PBO:0068470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 47, pseudogene","termid":"PBO:0068470"}


id: PBO:0065434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 7","termid":"PBO:0065434"}


id: PBO:0090047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex PHD finger subunit Cti6","termid":"PBO:0090047"}


id: PBO:0050297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 like 2","termid":"PBO:0050297"}


id: FYPO:0007530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 does not occur at heterochromatin islands near genes that are normally expressed during the meiotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:22144463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me2 at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at heterochromatin island at meiotic gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007530"}


id: PBO:0063476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 4","termid":"PBO:0063476"}


id: GO:0072156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a distal tubule are generated and organized. The distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tubule morphogenesis","termid":"GO:0072156"}


id: GO:1902820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-undecene.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","GOC:mengo_curators","PMID:16013377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-undecene metabolic process","synonyms":[{"name":"1-undecene metabolism","type":"exact"}],"termid":"GO:1902820"}


id: MONDO:0009097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of persistent hyperplastic primary vitreous.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"persistent hyperplastic primary vitreous","termid":"MONDO:0019631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"persistent hyperplastic primary vitreous, autosomal recessive","secondary_identifiers":["OMIM:221900","MEDGEN:370100","GARD:18167","Orphanet:300337","UMLS:C1969783"],"synonyms":[{"name":"PHPVAR","type":"related"},{"name":"autosomal recessive persistent hyperplastic primary vitreous","type":"exact"},{"name":"persistent fetal vasculature","type":"related"},{"name":"persistent foetal vasculature","type":"related"},{"name":"persistent hyperplastic primary vitreous, autosomal recessive","type":"exact"},{"name":"retinal nonattachment and falciform detachment","type":"related"},{"name":"retinal nonattachment, nonsyndromic congenital","type":"related"}],"termid":"MONDO:0009097","xrefs":{"Monarch":{"xref_id":"0009097"}}}


id: MONDO:0000612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the lymphatic part of lymphoid system","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"lymphatic system cancer","secondary_identifiers":["DOID:0060073"],"synonyms":[{"name":"cancer of lymphatic part of lymphoid system","type":"exact"},{"name":"lymphatic part of lymphoid system cancer","type":"exact"},{"name":"malignant lymphatic part of lymphoid system neoplasm","type":"exact"},{"name":"malignant neoplasm of lymphatic part of lymphoid system","type":"exact"}],"termid":"MONDO:0000612","xrefs":{"Monarch":{"xref_id":"0000612"}}}


id: SO:0000022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region forming a motif, composed of adenines, where the minor groove edges are inserted into the minor groove of another helix.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_minor_RNA_motif","synonyms":[{"name":"A minor RNA motif","type":"exact"}],"termid":"SO:0000022"}


id: PBO:0051133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2/OR16-5 (non-functional)","termid":"PBO:0051133"}


id: PBO:0091764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type region non-coding RNA","termid":"PBO:0091764"}


id: MONDO:0024381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A circadian sleep disorder that results from traveling across time zones.","direct_ancestors":[{"relation_name":"is_a","term_name":"circadian rhythm sleep disorder","termid":"MONDO:0024361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circadian rhythm sleep disorder, jet lag type","secondary_identifiers":["UMLS:C0231311","ICD10CM:G47.25","MEDGEN:115901"],"synonyms":[{"name":"jet lag","type":"exact"}],"termid":"MONDO:0024381","xrefs":{"Monarch":{"xref_id":"0024381"}}}


id: PBO:0046546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FRD member 3","termid":"PBO:0046546"}


id: MONDO:0005510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Collection of urine in the renal pelvis that results in dilatation of the renal pelvis and calyces. It is caused by obstruction of urine flow, nephrolithiasis, or vesicoureteral reflux. Signs and symptoms include flank pain, nausea, vomiting, fever, and dysuria.","definition_xrefs":["EFO:0005562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary tract obstruction","termid":"MONDO:0003330"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hydronephrosis","secondary_identifiers":["UMLS:C0020295","DOID:11111","ICD9:591","SCTID:43064006","MESH:D006869","MEDGEN:42531","NCIT:C26796"],"termid":"MONDO:0005510","xrefs":{"Monarch":{"xref_id":"0005510"}}}


id: GO:0034787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydro-1,1a-dihydroxy-9-fluorenone + H2O = 2,3-dihydroxy-2'-carboxybiphenyl + 3 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydro-1,1a-dihydroxy-9-fluorenone dehydrogenase activity (obsolete GO:0034787)","termid":"GO:0034787"}


id: MONDO:0700002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurological disorder in which the cause of the disease is a mutation in the ATP1A3.","definition_xrefs":["PMID:20301295","PMID:31178018","MONDO:patterns/disease_series_by_gene","PMID:33762331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP1A3-associated neurological disorder","synonyms":[{"name":"ATP1A3 neurological disorder","type":"exact"},{"name":"ATP1A3 related neurological disorder","type":"exact"},{"name":"neurological disorder caused by mutation in ATP1A3","type":"exact"}],"termid":"MONDO:0700002","xrefs":{"Monarch":{"xref_id":"0700002"}}}


id: PBO:0027678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_translation","termid":"PBO:0027678"}


id: GO:1903381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902235"},{"relation_name":"regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0036483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of ER stress-induced neuron apoptosis","type":"broad"},{"name":"regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of endoplasmic reticulum stress-induced neuron apoptosis","type":"broad"},{"name":"regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1903381"}


id: PBO:0058950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKKS centrosomal shuttling protein","termid":"PBO:0058950"}


id: PBO:0088324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome complex disassembly protein Ntr2","termid":"PBO:0088324"}


id: MONDO:0014662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary sensory neuropathy characterized by congenital insensitivity to pain and decreased sweating and tear production that has material basis in homozygous mutation in the PRDM12 gene on chromosome 9q34.","definition_xrefs":["DOID:0070153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002320"],"is_obsolete":false,"name":"congenital insensitivity to pain-hypohidrosis syndrome","secondary_identifiers":["OMIM:616488","UMLS:C4225308","GARD:17866","MEDGEN:894363","Orphanet:478664"],"synonyms":[{"name":"CIP-hypohidrosis syndrome","type":"exact"},{"name":"HSAN 8","type":"related"},{"name":"HSAN8","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 8","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type VIII","type":"exact"},{"name":"neuropathy, hereditary sensory and autonomic, type 8","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type VIII","type":"related"}],"termid":"MONDO:0014662","xrefs":{"Monarch":{"xref_id":"0014662"}}}


id: GO:0045619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"regulates","term_name":"lymphocyte differentiation","termid":"GO:0030098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte differentiation","synonyms":[{"name":"regulation of lymphocyte development","type":"related"}],"termid":"GO:0045619"}


id: PBO:0000477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Img2 (predicted)","termid":"PBO:0000477"}


id: MONDO:0044299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenic syndrome, congenital, 22","secondary_identifiers":["UMLS:C4479088","MEDGEN:1393545","DOID:0080587","OMIM:616224"],"synonyms":[{"name":"CMS22","type":"related"},{"name":"Prepl deficiency","type":"related"},{"name":"myasthenic syndrome, congenital, 22","type":"exact"}],"termid":"MONDO:0044299","xrefs":{"Monarch":{"xref_id":"0044299"}}}


id: PBO:0089268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf6","termid":"PBO:0089268"}


id: PBO:0050012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase domain containing 1","termid":"PBO:0050012"}


id: GO:0021539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the subthalamus over time, from its formation to the mature structure. The subthalamus is the anterior part of the diencephalon that lies between the thalamus, hypothalamus, and tegmentum of the mesencephalon, including subthalamic nucleus, zona incerta, the fields of Forel, and the nucleus of ansa lenticularis.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dgh","GOC:dph","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subthalamus development","synonyms":[{"name":"ventral thalamus development","type":"related"}],"termid":"GO:0021539"}


id: GO:0000835
data:
  {"annotated_genes":["SJAG_03841","SJAG_01051","SJAG_05274","SJAG_01134","SJAG_01709","SJAG_04384","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88767,104766,104291,107137,103452,109025,116597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex found in the ER.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ubiquitin ligase complex","termid":"GO:0000153"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01051":null,"SJAG_01134":null,"SJAG_01709":null,"SJAG_03345":null,"SJAG_03841":null,"SJAG_04384":null,"SJAG_05274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0032991","GO:0005783","GO:0005789","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"ER ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000835","terms_by_termid":{"GO:0000836":null}}


id: PBO:0047255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 240 member C","termid":"PBO:0047255"}


id: PBO:0080651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 G2 checkpoint kinase","termid":"PBO:0080651"}


id: PBO:0076913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFAP2A antisense RNA 2","termid":"PBO:0076913"}


id: GO:1902850
data:
  {"annotated_genes":["SJAG_01805","SJAG_03345","SJAG_04412","SJAG_01215","SJAG_04464","SJAG_04003","SJAG_02332","SJAG_03073","SJAG_04841","SJAG_01224","SJAG_00930","SJAG_00514","SJAG_03540","SJAG_03673","SJAG_02761","SJAG_00794","SJAG_01785","SJAG_02286","SJAG_02509","SJAG_03116","SJAG_07018","SJAG_01297","SJAG_00140","SJAG_00078","SJAG_01546","SJAG_01270","SJAG_02246","SJAG_02737","SJAG_01613","SJAG_01837","SJAG_04745","SJAG_00773","SJAG_02695","SJAG_00244","SJAG_02795","SJAG_02624","SJAG_04901","SJAG_02609","SJAG_03835","SJAG_03062","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116387,96479,75937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"},{"annotations":[94274,94811,75224],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[108485,98725,96271,102534],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[96373,99877,110036,114491,96790,96274,109071,100481,118100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090307"},{"annotations":[88774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"},{"annotations":[107721,117587,100927,118101,106893,103031,98730,103383],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000022"},{"annotations":[103032,94277,99878],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0061805"},{"annotations":[98131,100928,99352,96791,99879,103384,94278,107722],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[98731,100929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[96792,100930,94279,98732,108313],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[107723,103385,116116,97357,98733,93301,113388,97302,108314,111578,89473,96275,72864,97781,87275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007052"},{"annotations":[110887],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[110465],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"},{"annotations":[114494],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110162"},{"annotations":[89384],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any microtubule cytoskeleton organization that is involved in mitosis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:18799626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00140":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00930":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01270":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01785":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02246":null,"SJAG_02286":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02509":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02695":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02795":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03345":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04412":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04901":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"microtubule cytoskeleton organization involved in mitosis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"microtubule cytoskeleton organisation involved in mitosis","type":"exact"},{"name":"microtubule cytoskeleton organization and biogenesis involved in mitosis","type":"related"},{"name":"microtubule dynamics involved in mitosis","type":"exact"}],"termid":"GO:1902850","terms_by_termid":{"GO:0000022":null,"GO:0000073":null,"GO:0000132":null,"GO:0007052":null,"GO:0051228":null,"GO:0051256":null,"GO:0060236":null,"GO:0061804":null,"GO:0061805":null,"GO:0090307":null,"GO:0110161":null,"GO:0110162":null,"GO:0140641":null,"GO:1901673":null,"GO:1990810":null}}


id: GO:0060560
data:
  {"annotated_genes":["SJAG_04509","SJAG_02392","SJAG_02169","SJAG_00514","SJAG_01017","SJAG_03581","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95351,89375,94083],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[87406,93524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[90240],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[114492],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"The increase in size or mass of an anatomical structure that contributes to the structure attaining its shape.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"developmental growth involved in morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"differential growth","type":"exact"}],"termid":"GO:0060560","terms_by_termid":{"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: GO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. For example, primary ribosomal RNA transcripts containing three genes, in this order, are produced in E. coli and other prokaryotic species. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000449"}


id: PBO:0005811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Sal3","termid":"PBO:0005811"}


id: GO:0030648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an aminoglycoside antibiotic, any member of a group of broad spectrum antibiotics, of similar toxicity and pharmacology, that contain an aminodeoxysugar, an amino- or guanidino-substituted inositol ring, and one or more residues of other sugars. The group includes streptomycin, neomycin, framycetin, kanamycin, paromomycin, and gentamicin.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycoside antibiotic biosynthetic process","synonyms":[{"name":"aminoglycoside antibiotic anabolism","type":"exact"},{"name":"aminoglycoside antibiotic biosynthesis","type":"exact"},{"name":"aminoglycoside antibiotic formation","type":"exact"},{"name":"aminoglycoside antibiotic synthesis","type":"exact"}],"termid":"GO:0030648"}


id: FYPO:0007488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is decreased, and the protein is present in the vacuole instead.","definition_xrefs":["PomBase:mah","PMID:32918581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to Golgi apparatus","termid":"FYPO:0004786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to vacuole","synonyms":[{"name":"decreased protein localisation to Golgi apparatus, with protein mislocalised to vacuole","type":"exact"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to vacuole during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to vacuole during vegetative growth","type":"exact"},{"name":"reduced protein localization to Golgi apparatus, with protein mislocalized to vacuole","type":"exact"}],"termid":"FYPO:0007488"}


id: PBO:0075506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPC24 component of NDC80 kinetochore complex","termid":"PBO:0075506"}


id: PBO:0067820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 122","termid":"PBO:0067820"}


id: PBO:0030871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_metabolic_process_during_vegetative_growth","termid":"PBO:0030871"}


id: PBO:0074181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 3","termid":"PBO:0074181"}


id: PBO:0052356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 5C","termid":"PBO:0052356"}


id: GO:0050459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoethanolamine = acetaldehyde + NH4 + phosphate.","definition_xrefs":["EC:4.2.3.2","RHEA:17889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"ethanolamine-phosphate phospho-lyase activity","secondary_identifiers":["KEGG_REACTION:R00748","MetaCyc:ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN","Reactome:R-HSA-5696415"],"synonyms":[{"name":"O-phosphoethanolamine-phospholyase activity","type":"related"},{"name":"O-phosphorylethanol-amine phospho-lyase activity","type":"related"},{"name":"amino alcohol O-phosphate phospholyase activity","type":"broad"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating)","type":"related"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating; acetaldehyde-forming)","type":"related"}],"termid":"GO:0050459"}


id: PBO:0057061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 145","termid":"PBO:0057061"}


id: GO:0003092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which renal water excretion is decreased.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of urine volume","termid":"GO:0035811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal water retention","synonyms":[{"name":"negative regulation of renal water excretion","type":"exact"}],"termid":"GO:0003092"}


id: GO:0097155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of sensory neuron axons into a bundle of rods, known as a fascicle.","definition_xrefs":["GOC:lb","PMID:18403711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal fasciculation","termid":"GO:0007413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fasciculation of sensory neuron axon","termid":"GO:0097155"}


id: FYPO:0000756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bafilomycin A1. Cells stop growing (and may die) at a concentration of bafilomycin A1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to bafilomycin A1","synonyms":[{"name":"hypersensitive to bafilomycin A1","type":"exact"},{"name":"sensitive to bafilomycin A","type":"related"},{"name":"sensitive to bafilomycin A1 during mitotic cell cycle","type":"related"},{"name":"sensitive to bafilomycin A1 during vegetative growth","type":"exact"}],"termid":"FYPO:0000756"}


id: GO:0042470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.","definition_xrefs":["GOC:jl","PMID:11584301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"melanosome","secondary_identifiers":["Wikipedia:Melanosome"],"termid":"GO:0042470"}


id: PBO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO deconjugating cysteine peptidase Ulp2 (predicted)","termid":"PBO:0001168"}


id: GO:0061881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increasesthe frequency, rate or extent of the directed movement of mitochondria along microtubules in axons away from the cell body and towards the presynapse.","definition_xrefs":["PMID:24302729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of anterograde axonal transport of mitochondrion","termid":"GO:0061880"},{"relation_name":"positively_regulates","term_name":"anterograde axonal transport of mitochondrion","termid":"GO:0098957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterograde axonal transport of mitochondrion","synonyms":[{"name":"positive regulation of anterograde axon transport of mitochondria","type":"exact"}],"termid":"GO:0061881"}


id: SO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift variant that causes the translational reading frame to be shortened relative to the reference feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_truncation","synonyms":[{"name":"ANNOVAR:frameshift deletion","type":"exact"},{"name":"Jannovar:frameshift_truncation","type":"exact"},{"name":"frameshift truncation","type":"exact"}],"termid":"SO:0001910"}


id: PBO:0000657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP domain","termid":"PBO:0000657"}


id: PATO:0002148
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A virulence that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"virulence","termid":"PATO:0002146"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased virulence","termid":"PATO:0002148"}


id: GO:0047218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumarate + UDP-D-glucose = 4-O-beta-D-glucosyl-4-hydroxycinnamate + UDP. Also acts on ferulate, caffeate and sinapate, forming a mixture of 4-glucosides and glucose esters.","definition_xrefs":["EC:2.4.1.126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"hydroxycinnamate 4-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.126-RXN","RHEA:21636"],"synonyms":[{"name":"UDP-glucose-hydroxycinnamate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:trans-4-hydroxycinnamate 4-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:trans-4-hydroxycinnamate 4-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"hydroxycinnamoyl glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-hydroxycinnamate glucosyltransferase activity","type":"related"}],"termid":"GO:0047218"}


id: FYPO:0007731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to chromatin at 3' end of genes","synonyms":[{"name":"normal condensin localization to chromatin at 3' end of genes","type":"narrow"},{"name":"normal protein localisation to chromatin at 3' end of genes","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of genes during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at 3' end of genes during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin downstream of genes","type":"exact"}],"termid":"FYPO:0007731"}


id: PBO:0030533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_GTPase_activity","termid":"PBO:0030533"}


id: FYPO:0003263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain more than four, and up to eight, spores form following conjugation and subsequent sporulation.","definition_xrefs":["PomBase:mah","PMID:24196444","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","termid":"FYPO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000121"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with more than four spores","synonyms":[{"name":"8-spored asci","type":"related"},{"name":"abnormal ascospore formation resulting in formation of asci with more than four spores","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci with more than four spores","type":"exact"},{"name":"asci with increased number of spores","type":"exact"},{"name":"eight-spored asci","type":"related"}],"termid":"FYPO:0003263"}


id: GO:0047031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diethyl (2R,3R)-2-methyl-3-hydroxysuccinate + NADP+ = diethyl 2-methyl-3-oxosuccinate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.229","RHEA:21008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"diethyl 2-methyl-3-oxosuccinate reductase activity","secondary_identifiers":["KEGG_REACTION:R04387","MetaCyc:1.1.1.229-RXN"],"synonyms":[{"name":"diethyl-(2R,3R)-2-methyl-3-hydroxysuccinate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047031"}


id: PBO:0055319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2747","termid":"PBO:0055319"}


id: PBO:0045464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D1","termid":"PBO:0045464"}


id: GO:0016216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + O2 = 2 H2O + isopenicillin N.","definition_xrefs":["RHEA:22428","EC:1.21.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"isopenicillin-N synthase activity","secondary_identifiers":["MetaCyc:1.21.3.1-RXN","KEGG_REACTION:R04872"],"synonyms":[{"name":"N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine:oxygen oxidoreductase (cyclizing)","type":"related"},{"name":"isopenicillin N synthase activity","type":"related"},{"name":"isopenicillin-N synthetase activity","type":"exact"}],"termid":"GO:0016216"}


id: PBO:0030244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_during_cellular_response_to_freezing","termid":"PBO:0030244"}


id: GO:2000191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fatty acid transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"fatty acid transport","termid":"GO:0015908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of fatty acid transport","termid":"GO:2000191"}


id: MONDO:0013175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the BEST1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 50","secondary_identifiers":["OMIM:613194","ICD10CM:H35.5","MESH:C567712","UMLS:C2750789","DOID:0110396","GARD:15629","MEDGEN:442563"],"synonyms":[{"name":"BEST1 retinitis pigmentosa","type":"exact"},{"name":"RP50","type":"exact"},{"name":"retinitis pigmentosa 50","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in BEST1","type":"exact"},{"name":"retinitis pigmentosa type 50","type":"exact"},{"name":"retinitis pigmentosa, concentric","type":"related"},{"name":"retinitis pigmentosa-50","type":"exact"}],"termid":"MONDO:0013175","xrefs":{"Monarch":{"xref_id":"0013175"}}}


id: PBO:0069423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 686, pseudogene","termid":"PBO:0069423"}


id: GO:0033130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an acetylcholine receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"acetylcholine receptor binding","termid":"GO:0033130"}


id: MONDO:0018805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystic dilatation of the hepatic duct or bile duct.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile duct cyst","secondary_identifiers":["ICD10CM:Q44.4","ICD9:751.69","ICD9:576.8","icd11.foundation:819487805","MEDGEN:3037","Orphanet:480501","SCTID:397868007","DOID:899","MESH:D015529","OMIM:603003","UMLS:C0008340","GARD:21973"],"synonyms":[{"name":"bile duct cysts","type":"exact"},{"name":"choledochal cyst","type":"exact"},{"name":"choledochal cysts","type":"exact"},{"name":"choledochocele","type":"exact"},{"name":"congenital choledochal cyst","type":"exact"},{"name":"congenital cystic dilatation of the biliary tract","type":"exact"}],"termid":"MONDO:0018805","xrefs":{"Monarch":{"xref_id":"0018805"}}}


id: MONDO:0005633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute disseminated encephalomyelitis (obsolete MONDO:0005633)","termid":"MONDO:0005633","xrefs":{"Monarch":{"xref_id":"0005633"}}}


id: PBO:0013026
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CMD1","termid":"PBO:0013026"}


id: FYPO:0000287
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02695:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02695","name":"tip1delta","uniquename":"SJAG_02695:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; 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id: MONDO:0001215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary systemic mycosis that results in systemic fungal infection, has material basis in Pseudallescheria boydii, which results in formation of abscesses.","definition_xrefs":["DOID:11186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary systemic mycosis","termid":"MONDO:0000308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allescheriosis","secondary_identifiers":["MEDGEN:509242","SCTID:80936003","ICD9:117.6","UMLS:C0153285"],"synonyms":[{"name":"Petriellidosis","type":"exact"}],"termid":"MONDO:0001215","xrefs":{"Monarch":{"xref_id":"0001215"}}}


id: PATO:0002255
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Texture quality inhering in a bearer by virtue of the bearer's being marked with one or more channels.","definition_xrefs":["PATOC:JE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grooved","synonyms":[{"name":"channeled","type":"related"},{"name":"creased","type":"related"}],"termid":"PATO:0002255"}


id: GO:0000791
data:
  {"annotated_genes":["SJAG_03047","SJAG_03126","SJAG_03844","SJAG_03832","SJAG_03689","SJAG_03161","SJAG_03567","SJAG_00342","SJAG_03128","SJAG_02416","SJAG_01717","SJAG_00471","SJAG_02849"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93842,101891,102898,104844,105657,105732,110716,111401,111493,111545,112821,113041,115422],"is_not":false,"summary":null,"term":"GO:0000791"}]},"cv_name":"cellular_component","definition":"A dispersed and relatively uncompacted form of chromatin that is in a transcription-competent conformation.","definition_xrefs":["PMID:32017156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00342":null,"SJAG_00471":null,"SJAG_01717":null,"SJAG_02416":null,"SJAG_02849":null,"SJAG_03047":null,"SJAG_03126":null,"SJAG_03128":null,"SJAG_03161":null,"SJAG_03567":null,"SJAG_03689":null,"SJAG_03832":null,"SJAG_03844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"euchromatin","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao445485807","GO:0035327","GO:0005719","Wikipedia:Euchromatin"],"synonyms":[{"name":"nuclear euchromatin","type":"related"},{"name":"transcriptionally active chromatin","type":"exact"}],"termid":"GO:0000791","terms_by_termid":{"GO:0000791":null}}


id: MONDO:0019849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated micropenis","secondary_identifiers":["Orphanet:95707","MEDGEN:1843275","GARD:19292","UMLS:C5681560"],"termid":"MONDO:0019849","xrefs":{"Monarch":{"xref_id":"0019849"}}}


id: FYPO:0007842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is absent.","definition_xrefs":["PMID:34019809","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"abolished NAT activity","type":"related"},{"name":"abolished protein N-terminal acetyltransferase activity","type":"exact"},{"name":"peptide alpha-N-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0007842"}


id: PBO:0047560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF13 antisense RNA 1","termid":"PBO:0047560"}


id: PBO:0052129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 1","termid":"PBO:0052129"}


id: PBO:0028527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere_central_core","termid":"PBO:0028527"}


id: GO:0006201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanosine monophosphate into other compounds, including inosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP catabolic process","termid":"GO:0046038"},{"relation_name":"is_a","term_name":"IMP metabolic process","termid":"GO:0046040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"GMP catabolic process to IMP","synonyms":[{"name":"GMP breakdown to IMP","type":"exact"},{"name":"GMP degradation to IMP","type":"exact"}],"termid":"GO:0006201"}


id: FYPO:0004976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which depolymerization (i.e. removal of tubulin dimers) of microtubules extending in front of a moving spindle pole body occurs at a greater rate, or speed, than normal.","definition_xrefs":["GO:0036078","PMID:16611238","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0003194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body","synonyms":[{"name":"decreased microtubule stability ahead of moving spindle pole body","type":"related"},{"name":"decreased stability of forwards-extending microtubules","type":"related"},{"name":"increased microtubule shrinkage ahead of moving spindle pole body","type":"related"},{"name":"increased rate of forward-extending microtubule depolymerization","type":"exact"},{"name":"increased rate of microtubule catastrophe ahead of moving spindle pole body","type":"related"},{"name":"increased rate of microtubule depolymerisation ahead of moving spindle pole body","type":"exact"},{"name":"increased rate of microtubule depolymerization ahead of moving SPB","type":"exact"},{"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0004976"}


id: GO:0034137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 2 signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 2 signaling pathway","termid":"GO:0034135"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 2 signaling pathway","termid":"GO:0034134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 2 signaling pathway","synonyms":[{"name":"positive regulation of TLR2 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 2 signalling pathway","type":"exact"}],"termid":"GO:0034137"}


id: MONDO:0014442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Bardet-Biedl syndrome that has material basis in homozygous mutation in the CEP290 gene on chromosome 12q21.","definition_xrefs":["PMID:18327255","DOID:0110136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"CEP290-related ciliopathy","termid":"MONDO:0100451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 14","secondary_identifiers":["MEDGEN:393033","MESH:C567141","UMLS:C2673874","OMIM:615991","GARD:16038"],"synonyms":[{"name":"BBS14","type":"exact"},{"name":"Bardet-Biedl syndrome 14","type":"exact"},{"name":"Bardet-Biedl syndrome 14, modifier of","type":"exact"},{"name":"Bardet-Biedl syndrome type 14","type":"exact"}],"termid":"MONDO:0014442","xrefs":{"Monarch":{"xref_id":"0014442"}}}


id: MONDO:0024431
data:
  {"annotated_genes":["SJAG_01344","SJAG_03363","SJAG_00938","SJAG_03011","SJAG_05213","SJAG_03785","SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[86317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[86501,86502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[85406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[84833,84834,84832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"},{"annotations":[86440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01344":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03785":null,"SJAG_05194":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"bilirubin metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:80006005","UMLS:C0268305","MEDGEN:541273"],"synonyms":[{"name":"disorder of bilirubin metabolism","type":"exact"}],"termid":"MONDO:0024431","terms_by_termid":{"MONDO:0008822":null,"MONDO:0009380":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0024431"}}}


id: PBO:0086011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; orthologs are present in S. bayanus, S. paradoxus and Ashbya gossypii; YCL012C is not an essential gene","termid":"PBO:0086011"}


id: PBO:0046749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 4","termid":"PBO:0046749"}


id: PBO:0081796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 726","termid":"PBO:0081796"}


id: PBO:0065822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5C antisense RNA 1","termid":"PBO:0065822"}


id: GO:0036373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-L-fucose = beta-L-fucose.","definition_xrefs":["RHEA:25580","PMID:15060078","GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"L-fucose mutarotase activity","secondary_identifiers":["EC:5.1.3.29","MetaCyc:RXN0-5298"],"synonyms":[{"name":"alpha-L-fucose 1-epimerase activity","type":"related"},{"name":"fucose 1-epimerase activity","type":"related"},{"name":"type-2 mutarotase activity","type":"related"}],"termid":"GO:0036373"}


id: PATO:0002504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterodorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodorsal orientation","synonyms":[{"name":"posterodorsally directed","type":"exact"}],"termid":"PATO:0002504"}


id: MONDO:0010298
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85695],"is_not":false,"summary":null,"term":"MONDO:0010298"}]},"cv_name":"mondo","definition":"Lesch-Nyhan syndrome (LNS) is the most severe form of hypoxanthine-guanine phosphoribosyltransferase (HPRT) deficiency, a hereditary disorder of purine metabolism, and is associated with uric acid overproduction (UAO), neurological troubles, and behavioral problems.","definition_xrefs":["Orphanet:510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hypoxanthine-guanine phosphoribosyltransferase deficiency","termid":"MONDO:0016088"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"Lesch-Nyhan syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:10406007","icd11.foundation:1886495906","NCIT:C61255","ICD10CM:E79.1","GARD:7226","ICD9:277.2","NANDO:2200586","UMLS:C0023374","MEDGEN:9721","MedDRA:10057589","MESH:D007926","OMIM:300322","DOID:1919","NORD:1365"],"synonyms":[{"name":"HG-PRT deficiency","type":"exact"},{"name":"HPRT complete deficiency","type":"exact"},{"name":"HPRT deficiency","type":"related"},{"name":"HPRT deficiency grade IV","type":"exact"},{"name":"HPRT deficiency, complete","type":"related"},{"name":"HPRT deficiency, neurologic variant","type":"related"},{"name":"Hprt1 deficiency","type":"related"},{"name":"LNS","type":"related"},{"name":"Lesch - Nyhan syndrome","type":"exact"},{"name":"Lesch Nyhan Syndrome","type":"exact"},{"name":"Lesch Nyhan disease","type":"related"},{"name":"Lesch Nyhan syndrome","type":"related"},{"name":"Lesch-Nyhan syndrome","type":"exact"},{"name":"Lesch-Nyhan syndrome, X-linked recessive","type":"exact"},{"name":"Lesch-Nyhan syndrome, neurologic variant","type":"related"},{"name":"X-linked hyperuricemia","type":"exact"},{"name":"X-linked hyperuricemia (disorder) [ambiguous]","type":"exact"},{"name":"complete hypoxanthine-guanine phosphoribosyltransferase deficiency","type":"exact"},{"name":"deficiency of IMP pyrophosphorylase","type":"exact"},{"name":"hypoxanthine guanine phospho-ribosyltransferase 1 deficiency","type":"related"},{"name":"hypoxanthine guanine phosphoribosyltransferase 1 deficiency","type":"related"},{"name":"hypoxanthine guanine phosphoribosyltransferase complete deficiency","type":"exact"},{"name":"hypoxanthine guanine phosphoribosyltransferase deficiency, grade IV","type":"exact"},{"name":"hypoxanthine-guanine-phosphoribosyltransferase deficiency (& [Lesch - Nyhan syndrome])","type":"related"}],"termid":"MONDO:0010298","terms_by_termid":{"MONDO:0010298":null},"xrefs":{"Monarch":{"xref_id":"0010298"}}}


id: PBO:0058144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4440","termid":"PBO:0058144"}


id: MONDO:0007057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic osteolysis syndrome characterized by acroosteolysis of distal phalanges and generalized osteoporosis, associated with additional ossification anomalies, craniofacial dysmorphism, dental anomalies and a wide range of other characteristics.","definition_xrefs":["Orphanet:955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"disappearing bone disease","termid":"MONDO:0003157"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"acroosteolysis","termid":"MONDO:0007056"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Acroosteolysis dominant type","secondary_identifiers":["MESH:C531695","ICD9:756.59","DOID:2736","GARD:508","NCIT:C84745","NORD:1214","MEDGEN:182961","SCTID:63122002","MESH:C535663","UMLS:C0917715","OMIM:102500","MESH:C537586"],"synonyms":[{"name":"Arthrodentoosteodysplasia","type":"exact"},{"name":"Cheney syndrome","type":"exact"},{"name":"HJCYS","type":"related"},{"name":"Hajdu Cheney Syndrome","type":"exact"},{"name":"Hajdu-Cheney syndrome","type":"exact"},{"name":"acrodentoosteodysplasia","type":"exact"},{"name":"acroosteolysis with osteoporosis and changes in skull and mandible","type":"exact"},{"name":"serpentine fibula polycystic kidney syndrome","type":"exact"},{"name":"serpentine fibula-polycystic kidney syndrome","type":"exact"},{"name":"serpentine fibula-polycystic kidneys syndrome","type":"exact"}],"termid":"MONDO:0007057","xrefs":{"Monarch":{"xref_id":"0007057"}}}


id: GO:1903762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization.","definition_xrefs":["PMID:18337493","GOC:rl","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:BHF","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization (obsolete GO:1903762)","synonyms":[{"name":"activation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"activation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up-regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"upregulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903762"}


id: PBO:0060032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 20","termid":"PBO:0060032"}


id: GO:0036245
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104693],"is_not":false,"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a menadione stimulus. Menadione (also called vitamin K3) is a naphthoquinone having a methyl substituent at the 2-position.","definition_xrefs":["Wikipedia:Menadione","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to vitamin K","termid":"GO:0071307"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to menadione","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to vitamin K3","type":"exact"}],"termid":"GO:0036245","terms_by_termid":{"GO:0036245":null}}


id: PBO:0075250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 2","termid":"PBO:0075250"}


id: MONDO:0003928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of leiomyosarcoma arising from the uterus corpus. It is characterized by the presence of cellular pleomorphism, malignant cells with large nuclei, and a myxoid stroma.","definition_xrefs":["NCIT:C40175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myxoid leiomyosarcoma","termid":"MONDO:0003359"},{"relation_name":"is_a","term_name":"leiomyosarcoma of the corpus uteri","termid":"MONDO:0016262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus myxoid leiomyosarcoma","secondary_identifiers":["ONCOTREE:UMLMS","UMLS:C1519861","DOID:6567","MEDGEN:311426"],"synonyms":[{"name":"body of uterus myxoid leiomyosarcoma","type":"exact"},{"name":"myxoid leiomyosarcoma of body of uterus","type":"exact"},{"name":"uterine corpus myxoid leiomyosarcoma","type":"exact"},{"name":"uterine myxoid leiomyosarcoma","type":"related"}],"termid":"MONDO:0003928","xrefs":{"Monarch":{"xref_id":"0003928"}}}


id: PBO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liddle syndrome","termid":"PBO:0001738"}


id: GO:0140728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GC-box, a DNA motif with the consensus sequence GGGCGG that is located upstream of the start point of eukaryotic transcription units. The GC-box may occur in multiple copies or in either orientation relative to the transcription start site.","definition_xrefs":["PMID:14701757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0000976","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GC-box binding","synonyms":[{"name":"GC box binding","type":"exact"},{"name":"GC rich promoter region binding","type":"broad"},{"name":"GC-rich region binding","type":"broad"},{"name":"GC_rich_promoter_region binding","type":"broad"}],"termid":"GO:0140728"}


id: GO:0070772
data:
  {"annotated_genes":["SJAG_01236","SJAG_02289","SJAG_02665","SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87246,106757,109447,112998],"is_not":false,"summary":null,"term":"GO:0070772"}]},"cv_name":"cellular_component","definition":"A phosphatidylinositol kinase complex that contains a phosphatidylinositol-3-phosphate 5-kinase subunit (Fab1p in yeast; PIKFYVE in mammals), a kinase activator, and a phosphatase, and may also contain additional proteins; it is involved in regulating the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate. In mammals the complex is composed of PIKFYVE, FIG4 and VAC14. In yeast it is composed of Atg18p, Fig4p, Fab1p, Vac14p and Vac7p.","definition_xrefs":["PMID:19037259","PMID:19158662","PMID:18950639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00638":null,"SJAG_01236":null,"SJAG_02289":null,"SJAG_02665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"PAS complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"autophagy-specific phosphatidylinositol 3-kinase complex","type":"related"}],"termid":"GO:0070772","terms_by_termid":{"GO:0070772":null}}


id: GO:1905417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GOC:TermGenie","GOC:cilia","GO_REF:0000058","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amoeboid sperm motility","termid":"GO:1905416"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amoeboid sperm motility","synonyms":[{"name":"down regulation of ameboid sperm motility","type":"exact"},{"name":"down regulation of ameboid sperm movement","type":"exact"},{"name":"down regulation of amoeboid sperm motility","type":"exact"},{"name":"down regulation of amoeboid sperm movement","type":"exact"},{"name":"down-regulation of ameboid sperm motility","type":"exact"},{"name":"down-regulation of ameboid sperm movement","type":"exact"},{"name":"down-regulation of amoeboid sperm motility","type":"exact"},{"name":"down-regulation of amoeboid sperm movement","type":"exact"},{"name":"downregulation of ameboid sperm motility","type":"exact"},{"name":"downregulation of ameboid sperm movement","type":"exact"},{"name":"downregulation of amoeboid sperm motility","type":"exact"},{"name":"downregulation of amoeboid sperm movement","type":"exact"},{"name":"inhibition of ameboid sperm motility","type":"narrow"},{"name":"inhibition of ameboid sperm movement","type":"narrow"},{"name":"inhibition of amoeboid sperm motility","type":"narrow"},{"name":"inhibition of amoeboid sperm movement","type":"narrow"},{"name":"negative regulation of ameboid sperm motility","type":"exact"},{"name":"negative regulation of ameboid sperm movement","type":"exact"},{"name":"negative regulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905417"}


id: GO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Proteins that associate with the ends of intermediate filaments and couple the intermediate filaments to the plasma membrane.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete type III intermediate filament associated protein (obsolete GO:0001724)","synonyms":[{"name":"type III intermediate filament associated protein","type":"exact"}],"termid":"GO:0001724"}


id: GO:0048038
data:
  {"annotated_genes":["SJAG_02398","SJAG_04223","SJAG_03198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96671],"is_not":false,"summary":null,"term":"GO:0048038"},{"annotations":[114661,112643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048039"}]},"cv_name":"molecular_function","definition":"Binding to a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_03198":null,"SJAG_04223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"quinone binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048038","terms_by_termid":{"GO:0048038":null,"GO:0048039":null}}


id: SO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the coding regions of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_CDS","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"Seattleseq:coding-notMod3","type":"exact"},{"name":"Seattleseq:coding-unknown","type":"exact"}],"termid":"SO:0002081"}


id: GO:0070711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an adenosine-uridine dinucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA adenosine-uridine insertion","synonyms":[{"name":"RNA AU insertion","type":"exact"}],"termid":"GO:0070711"}


id: GO:0140238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vesicle-mediated transport process in which the presynapse take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.","definition_xrefs":["PMID:24719103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"presynaptic endocytosis","termid":"GO:0140238"}


id: GO:0015759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Beta-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in a beta configuration.","definition_xrefs":["PMID:6756954","ISBN:0198506732","PMID:3034860","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transport","termid":"GO:0042946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"beta-glucoside transport","termid":"GO:0015759"}


id: PBO:0045713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 1","termid":"PBO:0045713"}


id: MONDO:1012064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ancon dwarfism, non-human animal","termid":"MONDO:1011941"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ancon dwarfism, sheep","secondary_identifiers":["OMIA:000302-9940"],"termid":"MONDO:1012064","xrefs":{"Monarch":{"xref_id":"1012064"}}}


id: GO:0031562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of a growing fungal hypha.","definition_xrefs":["PMID:15976451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"hyphal tip","termid":"GO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0032991","GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"hyphal tip polarisome","termid":"GO:0031562"}


id: MONDO:0859187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and brain abnormalities","secondary_identifiers":["MEDGEN:1794187","UMLS:C5561977","OMIM:619512"],"termid":"MONDO:0859187","xrefs":{"Monarch":{"xref_id":"0859187"}}}


