# terms

id: GO:0033605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a catecholamine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of catecholamine secretion","synonyms":[{"name":"activation of catecholamine secretion","type":"narrow"},{"name":"stimulation of catecholamine secretion","type":"narrow"},{"name":"up regulation of catecholamine secretion","type":"exact"},{"name":"up-regulation of catecholamine secretion","type":"exact"},{"name":"upregulation of catecholamine secretion","type":"exact"}],"termid":"GO:0033605"}


id: GO:0061582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an intestinal epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell migration","termid":"GO:0061582"}


id: PBO:0063197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 19","termid":"PBO:0063197"}


id: GO:0006537
data:
  {"annotated_genes":["SJAG_04054","SJAG_03266","SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101022,110686,117176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"glutamine family amino acid biosynthetic process","termid":"GO:0009084"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03266":null,"SJAG_04054":null,"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"glutamate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutamate anabolism","type":"exact"},{"name":"glutamate biosynthesis","type":"exact"},{"name":"glutamate biosynthesis, using glutamate dehydrogenase (NAD(P)+)","type":"narrow"},{"name":"glutamate biosynthesis, using glutamate synthase (NADPH)","type":"narrow"},{"name":"glutamate biosynthetic process, using glutamate dehydrogenase (NAD(P)+)","type":"narrow"},{"name":"glutamate biosynthetic process, using glutamate synthase (NADPH)","type":"narrow"},{"name":"glutamate formation","type":"exact"},{"name":"glutamate synthesis","type":"exact"},{"name":"glutamic acid biosynthesis","type":"exact"},{"name":"glutamic acid biosynthetic process","type":"exact"}],"termid":"GO:0006537","terms_by_termid":{"GO:0097054":null}}


id: PBO:0053186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEO1 homolog, Paf1/RNA polymerase II complex component","termid":"PBO:0053186"}


id: SO:0000976
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature_attribute describing a feature that is not manifest under normal conditions.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic","termid":"SO:0000976"}


id: GO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of dopamine. from a presynapse, across a chemical synapse, the subsequent activation of dopamine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dph","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission, dopaminergic","synonyms":[{"name":"dopaminergic synaptic transmission","type":"exact"}],"termid":"GO:0001963"}


id: PBO:0032701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0032701"}


id: MONDO:0001907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatomyositis in an adult.","definition_xrefs":["NCIT:C27313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336"],"is_obsolete":false,"name":"adult dermatomyositis","secondary_identifiers":["DOID:14202","icd11.foundation:544509908","UMLS:C0221056","MEDGEN:66356","SCTID:402425006"],"synonyms":[{"name":"adult onset dermatomyositis","type":"exact"},{"name":"dermatomyositis of adults","type":"exact"}],"termid":"MONDO:0001907","xrefs":{"Monarch":{"xref_id":"0001907"}}}


id: GO:0022832
data:
  {"annotated_genes":["SJAG_00048","SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[89012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated channel activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022832","terms_by_termid":{"GO:0008308":null,"GO:0008331":null}}


id: PBO:0059381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 6","termid":"PBO:0059381"}


id: PBO:0014294
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Choline Sensitivity homolog","termid":"PBO:0014294"}


id: GO:0006701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants.","definition_xrefs":["PMID:14613534","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C21-steroid hormone biosynthetic process","termid":"GO:0006700"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"progesterone metabolic process","termid":"GO:0042448"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"progesterone biosynthetic process","synonyms":[{"name":"progesterone anabolism","type":"exact"},{"name":"progesterone biosynthesis","type":"exact"},{"name":"progesterone formation","type":"exact"},{"name":"progesterone synthesis","type":"exact"}],"termid":"GO:0006701"}


id: GO:0018261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The guanylylation of peptidyl-lysine to form peptidyl-N6-(phospho-5'-guanosine)-L-lysine.","definition_xrefs":["RESID:AA0228"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine guanylylation (obsolete GO:0018261)","termid":"GO:0018261"}


id: GO:0045797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of uptake of cholesterol into the blood by absorption from the intestine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal cholesterol absorption","termid":"GO:0030300"},{"relation_name":"is_a","term_name":"positive regulation of intestinal lipid absorption","termid":"GO:1904731"},{"relation_name":"positively_regulates","term_name":"intestinal cholesterol absorption","termid":"GO:0030299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intestinal cholesterol absorption","synonyms":[{"name":"activation of cholesterol absorption","type":"narrow"},{"name":"stimulation of cholesterol absorption","type":"narrow"},{"name":"up regulation of cholesterol absorption","type":"exact"},{"name":"up-regulation of cholesterol absorption","type":"exact"},{"name":"upregulation of cholesterol absorption","type":"exact"}],"termid":"GO:0045797"}


id: PBO:0061075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor interacting Ras like 2","termid":"PBO:0061075"}


id: GO:0044627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of the classical pathway of complement activation, in a different organism.","definition_xrefs":["PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation, classical pathway in another organism (obsolete GO:0044627)","synonyms":[{"name":"modulation of complement activation, classical pathway in other organism","type":"exact"},{"name":"regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044627"}


id: MONDO:0012944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tibial aplasia-ectrodactyly syndrome","termid":"MONDO:0018050"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"chromosome 17P13.3, telomeric, duplication syndrome","secondary_identifiers":["GARD:15572","OMIM:612576","MESH:C567245","MEDGEN:390813","UMLS:C2675492"],"synonyms":[{"name":"chromosome 17P13.3, telomeric, duplication syndrome","type":"exact"},{"name":"split-hand/foot malformation with long bone deficiency 3","type":"related"}],"termid":"MONDO:0012944","xrefs":{"Monarch":{"xref_id":"0012944"}}}


id: PBO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit 2-like Tca17 (predicted)","termid":"PBO:0033818"}


id: GO:0019066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The translocation of an entire virus particle across the host cell plasma membrane.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete translocation of virus into host cell (obsolete GO:0019066)","synonyms":[{"name":"translocation of virus into host cell","type":"exact"},{"name":"viral translocation","type":"exact"}],"termid":"GO:0019066"}


id: PBO:0029758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_5'-adenosine_monophosphate_hydrolase_activity","termid":"PBO:0029758"}


id: PBO:0053020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LanC like glutathione S-transferase 1","termid":"PBO:0053020"}


id: GO:0052191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host phagocytosis (obsolete GO:0052191)","synonyms":[{"name":"activation by symbiont of host phagocytosis","type":"narrow"},{"name":"stimulation by symbiont of host phagocytosis","type":"narrow"},{"name":"up regulation by symbiont of host phagocytosis","type":"exact"},{"name":"up-regulation by symbiont of host phagocytosis","type":"exact"},{"name":"upregulation by symbiont of host phagocytosis","type":"exact"}],"termid":"GO:0052191"}


id: GO:0047654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an S-alkyl-L-cysteine S-oxide = an alkyl sulfenate + 2-aminoacrylate.","definition_xrefs":["EC:4.4.1.4","MetaCyc:ALLIIN-LYASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"alliin lyase activity","secondary_identifiers":["RHEA:20141"],"synonyms":[{"name":"L-cysteine sulfoxide lyase activity","type":"related"},{"name":"S-alkyl-L-cysteine S-oxide alkyl-sulfenate-lyase (2-aminoacrylate-forming)","type":"related"},{"name":"S-alkylcysteine sulfoxide lyase activity","type":"related"},{"name":"alkylcysteine sulfoxide lyase activity","type":"related"},{"name":"alliin alkyl-sulfenate-lyase activity","type":"related"},{"name":"alliinase activity","type":"related"},{"name":"cysteine sulfoxide lyase activity","type":"related"},{"name":"cysteine sulphoxide lyase activity","type":"related"}],"termid":"GO:0047654"}


id: GO:0010312
data:
  {"annotated_genes":["SJAG_01803","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93268,93269],"is_not":false,"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of zinc ion. These include transport of zinc away from sensitive areas and to compartments or complexes whose purpose is sequestration of zinc ion.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"stress response to zinc ion","termid":"GO:1990359"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of zinc ion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010312","terms_by_termid":{"GO:0010312":null}}


id: GO:0003899
data:
  {"annotated_genes":["SJAG_04261","SJAG_04408","SJAG_04030","SJAG_02101","SJAG_01765","SJAG_00399","SJAG_03921","SJAG_04994","SJAG_00458","SJAG_03035","SJAG_00619","SJAG_01713","SJAG_03578","SJAG_01313","SJAG_02600","SJAG_03181","SJAG_00637","SJAG_02506","SJAG_02070","SJAG_04934","SJAG_01562","SJAG_03144","SJAG_00731","SJAG_03014","SJAG_16460","SJAG_02653","SJAG_01444","SJAG_02627","SJAG_04894","SJAG_00119","SJAG_03468","SJAG_03761","SJAG_04161","SJAG_04106"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89072,91545,93415,93603,94638,95383,96316,100998,101038,101268,102024,102175,102443,104354,104802,105264,107167,107904,108735,109242,111825,113244,114114,115116,115901,116209],"is_not":false,"summary":null,"term":"GO:0003899"},{"annotations":[98915,102442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003896"},{"annotations":[91546,102827,112585,102176,113245,89073,113659,110133,105265,93416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001054"},{"annotations":[93417,113246,91547,93606,107168,102828,114115,96317,105266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001055"},{"annotations":[102177,102829,91548,105267,93418,113247,92531,89074,97655,110929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001056"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["EC:2.7.7.6","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-3' RNA polymerase activity","termid":"GO:0034062"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00399":null,"SJAG_00458":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02506":null,"SJAG_02600":null,"SJAG_02627":null,"SJAG_02653":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03761":null,"SJAG_03921":null,"SJAG_04030":null,"SJAG_04106":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04894":null,"SJAG_04934":null,"SJAG_04994":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140098","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"DNA-directed 5'-3' RNA polymerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000129","Reactome:R-HSA-167117","Reactome:R-HSA-5601926","MetaCyc:DNA-DIRECTED-RNA-POLYMERASE-RXN","Reactome:R-HSA-75850","Reactome:R-HSA-167115","Reactome:R-HSA-75873","Reactome:R-HSA-74986","Reactome:R-HSA-76576","Reactome:R-HSA-9697085","Reactome:R-HSA-174425","Reactome:R-HSA-203901","Reactome:R-HSA-9697084","Reactome:R-HSA-167136","Reactome:R-HSA-111264","Reactome:R-HSA-427366","Reactome:R-HSA-167113","Reactome:R-HSA-167121","Reactome:R-HSA-68913","Reactome:R-HSA-9670149","Reactome:R-HSA-6781824","Reactome:R-HSA-75869"],"synonyms":[{"name":"C RNA formation factors","type":"related"},{"name":"C ribonucleic acid formation factors","type":"related"},{"name":"DNA-dependent RNA nucleotidyltransferase activity","type":"related"},{"name":"DNA-dependent RNA polymerase activity","type":"related"},{"name":"DNA-dependent ribonucleate nucleotidyltransferase activity","type":"related"},{"name":"DNA-directed RNA polymerase I activity","type":"narrow"},{"name":"DNA-directed RNA polymerase II activity","type":"narrow"},{"name":"DNA-directed RNA polymerase III activity","type":"narrow"},{"name":"DNA-directed RNA polymerase activity","type":"broad"},{"name":"RNA nucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"RNA polymerase I activity","type":"narrow"},{"name":"RNA polymerase II activity","type":"narrow"},{"name":"RNA polymerase III activity","type":"narrow"},{"name":"deoxyribonucleic acid-dependent ribonucleic acid polymerase activity","type":"related"},{"name":"nucleoside-triphosphate:RNA nucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"transcriptase","type":"broad"}],"termid":"GO:0003899","terms_by_termid":{"GO:0001054":null,"GO:0001055":null,"GO:0001056":null,"GO:0003896":null,"GO:0003899":null}}


id: GO:0060449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a bud in the lung grows out from the point where it is formed.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud elongation involved in lung branching","termid":"GO:0060449"}


id: MONDO:0009736
data:
  {"annotated_genes":["SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85009],"is_not":false,"summary":null,"term":"MONDO:0009736"}]},"cv_name":"mondo","definition":"Any Neu-Laxova syndrome in which the cause of the disease is a mutation in the PHGDH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Neu-Laxova syndrome","termid":"MONDO:0000179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002320","MONDO:0004736"],"is_obsolete":false,"name":"Neu-Laxova syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080076","OMIM:256520","Orphanet:583607","UMLS:C4551478","MEDGEN:1633287","GARD:22336"],"synonyms":[{"name":"3-Phosphoglycerate dehydrogenase deficiency, neonatal form","type":"exact"},{"name":"3-phosphoglycerate dehydrogenase deficiency, prenatal form","type":"exact"},{"name":"NLS1","type":"related"},{"name":"Neu-Laxova syndrome","type":"related"},{"name":"Neu-Laxova syndrome 1","type":"exact"},{"name":"Neu-Laxova syndrome caused by mutation in PHGDH","type":"exact"},{"name":"Neu-Laxova syndrome due to 3-phosphoglycerate dehydrogenase deficiency","type":"exact"},{"name":"Neu-Laxova syndrome type 1","type":"exact"},{"name":"PHGDH Neu-Laxova syndrome","type":"exact"}],"termid":"MONDO:0009736","terms_by_termid":{"MONDO:0009736":null},"xrefs":{"Monarch":{"xref_id":"0009736"}}}


id: MONDO:0019702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"neonatal osteosclerotic dysplasia","secondary_identifiers":["GARD:19199","MEDGEN:721998","Orphanet:93443","SCTID:389236000","UMLS:C1300205"],"termid":"MONDO:0019702","xrefs":{"Monarch":{"xref_id":"0019702"}}}


id: GO:0060379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a cardiac myoblast. A cardiac myoblast is a precursor cell that has been committed to a cardiac muscle cell fate but retains the ability to divide and proliferate throughout life.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardioblast differentiation","termid":"GO:0010002"},{"relation_name":"is_a","term_name":"myoblast differentiation","termid":"GO:0045445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell myoblast differentiation","synonyms":[{"name":"cardiac myoblast differentiation","type":"related"},{"name":"myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:0060379"}


id: PR:O74972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4B4.11 gene.","definition_xrefs":["UniProtKB:O74972","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein fyv4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.11","synonyms":[{"name":"Spom972h-SPBC4B4.11","type":"exact"}],"termid":"PR:O74972"}


id: MONDO:0005705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the biliary passages with clonorchis sinensis, also called Opisthorchis sinensis. It may lead to inflammation of the biliary tract, proliferation of biliary epithelium, progressive portal fibrosis, and sometimes bile duct carcinoma. Extension to the liver may lead to fatty changes and cirrhosis. (From Dorland, 27th ed)","definition_xrefs":["MESH:D003003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clonorchiasis","secondary_identifiers":["ICD9:121.1","MEDGEN:3119","ICD10CM:B66.1","Orphanet:658917","SCTID:11938002","DOID:13767","EFO:0007210","UMLS:C0009021","icd11.foundation:918986134"],"synonyms":[{"name":"Oriental liver fluke disease","type":"exact"}],"termid":"MONDO:0005705","xrefs":{"Monarch":{"xref_id":"0005705"}}}


id: PBO:0061570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal glutamine amidase 1","termid":"PBO:0061570"}


id: GO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the neural retina. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:dph","GOC:mtg_sensu","GOC:tb","ISBN:0878932437","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"embryonic camera-type eye formation","termid":"GO:0060900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup morphogenesis involved in camera-type eye development","synonyms":[{"name":"optic cup morphogenesis involved in camera-style eye development","type":"exact"}],"termid":"GO:0002072"}


id: PATO:0002392
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located on a sloping line joining two nonconsecutive points of an entity relative to another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diagonal to","termid":"PATO:0002392"}


id: MONDO:0020184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare eyebrow/eyelashes anomaly (obsolete MONDO:0020184)","secondary_identifiers":["Orphanet:98594"],"termid":"MONDO:0020184","xrefs":{"Monarch":{"xref_id":"0020184"}}}


id: GO:0071981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in exit from diapause. Diapause is a neurohormonally mediated, dynamic state of low metabolic activity. Associated characteristics of this form of dormancy include reduced morphogenesis, increased resistance to environmental extremes, and altered or reduced behavioral activity. Full expression develops in a species-specific manner, usually in response to a number of environmental stimuli that precede unfavorable conditions. Once diapause has begun, metabolic activity is suppressed even if conditions favorable for development prevail. Once initiated, only certain stimuli are capable of releasing the organism from this state, and this characteristic is essential in distinguishing diapause from hibernation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from diapause","termid":"GO:0071981"}


id: PBO:0085442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyphosphatidylinositol phosphatase; dephosphorylates a number of phosphatidylinositol phosphates (PtdInsPs, PIPs) to PI; involved in endocytosis; hyperosmotic stress causes translocation to actin patches; synaptojanin-like protein with a Sac1 domain; INP52 has a paralog, INP53, that arose from the whole genome duplication","termid":"PBO:0085442"}


id: PR:Q10369
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snt1 gene.","definition_xrefs":["UniProtKB:Q10369","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22E12.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.19","synonyms":[{"name":"Spom972h-snt1","type":"exact"}],"termid":"PR:Q10369"}


id: GO:0042682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a compound eye cone cell.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"regulates","term_name":"compound eye cone cell fate specification","termid":"GO:0042679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye cone cell fate specification","secondary_identifiers":["GO:0042681"],"termid":"GO:0042682"}


id: PBO:0017765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide-nucleotide adenylyltransferase (predicted)","termid":"PBO:0017765"}


id: GO:0008515
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of sucrose from one side of a membrane to the other. Sucrose is the disaccharide O-beta-D-fructofuranosyl-(2->1)-alpha-D-glucopyranoside, a sweet-tasting, non-reducing sugar isolated industrially from sugar beet or sugar cane.","definition_xrefs":["ISBN:0815340729","ISBN:0198506732","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sucrose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019188"],"synonyms":[{"name":"sucrose permease (PTS) activity","type":"exact"},{"name":"sucrose permease activity","type":"related"}],"termid":"GO:0008515","terms_by_termid":{"GO:0008506":null}}


id: PBO:0070952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 7","termid":"PBO:0070952"}


id: PBO:0078363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 8-1","termid":"PBO:0078363"}


id: FYPO:0004855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of premeiotic DNA replication is abnormal, resulting in rereplication of part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of premeiotic DNA replication initiation","termid":"FYPO:0004758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal negative regulation of premeiotic DNA replication initiation resulting in partial rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation resulting in partial rereplication during meiotic cell cycle","type":"related"},{"name":"abnormal negative regulation of initiation of premeiotic DNA replication, resulting in partial rereplication","type":"exact"},{"name":"abnormal negative regulation of premeiotic DNA replication initiation resulting in partial re-replication","type":"exact"},{"name":"partial premeiotic DNA re-replication","type":"related"},{"name":"partial premeiotic DNA rereplication","type":"related"}],"termid":"FYPO:0004855"}


id: PBO:0016992
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin, related to Gsf2","termid":"PBO:0016992"}


id: MONDO:0019265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diazoxide-resistant focal hyperinsulism (DRFH) is a form of diazoxide-resistant hyperinsulinism characterized by recurrent episodes of profound hypoglycemia caused by an excessive/ uncontrolled insulin secretion (inappropriate for the level of glycemia) due to a focal adenomatous hyperplasia of pancreas, that is unresponsive to medical treatment with diazoxide, necessitating complete excision of the focal lesion.","definition_xrefs":["Orphanet:79298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-resistant hyperinsulinism","termid":"MONDO:0017186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"diazoxide-resistant focal hyperinsulinism","secondary_identifiers":["UMLS:C5680204","MEDGEN:1843436","GARD:18983"],"synonyms":[{"name":"hyperinsulinemic hypoglycemia, diazoxide-resistant focal form","type":"exact"}],"termid":"MONDO:0019265","xrefs":{"Monarch":{"xref_id":"0019265"}}}


id: GO:0043933
data:
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id: MONDO:0013045
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mycobacterium tuberculosis, susceptibility","termid":"MONDO:0000070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycobacterium tuberculosis, susceptibility to, 3","secondary_identifiers":["UMLS:C2752035","MEDGEN:416690","OMIM:612929"],"synonyms":[{"name":"MTBS3","type":"related"},{"name":"Mycobacterium tuberculosis, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0013045","xrefs":{"Monarch":{"xref_id":"0013045"}}}


id: GO:0046465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dolichyl diphosphate, a diphosphorylated dolichol derivative. In eukaryotes, these function as carriers of mono- and oligosaccharide residues in the glycosylation of lipids and proteins within intracellular membranes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"dolichyl diphosphate metabolic process","synonyms":[{"name":"dolichyl diphosphate metabolism","type":"exact"}],"termid":"GO:0046465"}


id: GO:0007437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the adult salivary gland are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult salivary gland morphogenesis","termid":"GO:0007437"}


id: PR:Q9UTM3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02037","PANTHER:PTHR10855:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn5 (Schizosaccharomyces pombe 972h-)","secondary_identifiers":["UniProtKB:Q9UTM3"],"synonyms":[{"name":"Spom972h-PSMD12","type":"exact"}],"termid":"PR:Q9UTM3"}


id: MONDO:0018154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Madelung disease, or deformity (MD) is a predominantly bilateral wrist anomaly characterized by shortened and bowed radii and long ulnae leading to dorsal dislocation of the distal ulna and limited mobility of the wrist and elbow.","definition_xrefs":["Orphanet:35688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leri-Weill dyschondrosteosis","termid":"MONDO:0007481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Madelung deformity","secondary_identifiers":["ICD9:755.54","MEDGEN:57537","GARD:12973","icd11.foundation:1398663515","MedDRA:10007700","MESH:C562398","SCTID:4530000","UMLS:C0152441"],"termid":"MONDO:0018154","xrefs":{"Monarch":{"xref_id":"0018154"}}}


id: MONDO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An occlusion of the retinal vasculature.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peripheral vascular disease","termid":"MONDO:0005294"},{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"vascular occlusion disorder","termid":"MONDO:0020672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal vascular occlusion","secondary_identifiers":["NCIT:C34980","SCTID:73757007","ICD10CM:H34","DOID:1729","UMLS:C0035326","ICD9:362.30","MEDGEN:19762","ICD9:362.3"],"synonyms":[{"name":"retinal vascular occlusion","type":"exact"},{"name":"retinal vascular occlusion, unspecified","type":"exact"}],"termid":"MONDO:0002089","xrefs":{"Monarch":{"xref_id":"0002089"}}}


id: PBO:0055154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2573","termid":"PBO:0055154"}


id: GO:0097085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An interferon regulatory factor complex that consists of a heterodimer of interferon regulatory factor 3 and interferon regulatory factor 5.","definition_xrefs":["PMID:12138184","GOC:cna"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon regulatory factor complex","termid":"GO:0097071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interferon regulatory factor 3-interferon regulatory factor 5 complex","synonyms":[{"name":"IRF3:IRF5 complex","type":"exact"}],"termid":"GO:0097085"}


id: PBO:0082389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-adaptin subunit of the clathrin-associated protein (AP-1) complex; binds clathrin; involved in clathrin-dependent Golgi protein sorting; protein abundance increases in response to DNA replication stress","termid":"PBO:0082389"}


id: MOD:01559
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01559"}


id: FYPO:0002317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of squalene measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular squalene level","synonyms":[{"name":"increased cellular squalene level during mitotic cell cycle","type":"related"},{"name":"increased cellular squalene level during vegetative growth","type":"exact"},{"name":"increased squalene accumulation","type":"related"}],"termid":"FYPO:0002317"}


id: PBO:0050308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 10","termid":"PBO:0050308"}


id: PBO:0045191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 4","termid":"PBO:0045191"}


id: PBO:0051941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2B pseudogene 1","termid":"PBO:0051941"}


id: PBO:0089115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type zinc finger protein, unknown biological role Cps3, potential makorin ortholog","termid":"PBO:0089115"}


id: PBO:0084625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionyl-tRNA synthetase; forms a complex with Gus1p, a glutamyl-tRNA synthetase, and Arc1p, which increases the catalytic efficiency of both synthetases; involved in the nuclear export of tRNAs; mutations in human ortholog MARS is associated with pediatric pulmonary alveolar proteinosis, interstitial lung and liver disease, and Charcot-Marie-Tooth disease; human MARS gene can complement the yeast null mutant","termid":"PBO:0084625"}


id: PBO:0061754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nyctalopin","termid":"PBO:0061754"}


id: PBO:0071511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 14","termid":"PBO:0071511"}


id: _global:decreased_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is present to a lower extent than in a preceding phase or process, where the experiment does not distinguish between decreased addition and increased removal of the modification (if this is known use the added_during or removed_during relation).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_during","termid":"_global:decreased_during"}


id: MONDO:1040043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the BBS1 gene.","definition_xrefs":["PMID:23847139","PMID:24026985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS1-related ciliopathy","synonyms":[{"name":"BBS1-related ciliopathy","type":"exact"}],"termid":"MONDO:1040043","xrefs":{"Monarch":{"xref_id":"1040043"}}}


id: MONDO:0009873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pilodental dysplasia-refractive errors syndrome is a rare ectodermal dysplasia syndrome characterized by dysplastic abnormalities of the hair and teeth (including hypodontia, abnormally shaped teeth, scalp hypotrichosis and pili annulati), follicular hyperkeratosis on the trunk and limbs, and hyperopia. Intensified delineation, reticular hyperpigmentation of the nape and astigmatism have also been reported. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:2892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pilodental dysplasia-refractive errors syndrome","secondary_identifiers":["OMIM:262020","UMLS:C1849805","GARD:277","MEDGEN:376661","MESH:C535763"],"synonyms":[{"name":"Euhidrotic ectodermal dysplasia","type":"exact"},{"name":"Kopysc-Barczyk-Krol syndrome","type":"exact"},{"name":"PILODENTAL dysplasia with refractive errors","type":"related"},{"name":"Trichodental dysplasia with hyperopia","type":"related"}],"termid":"MONDO:0009873","xrefs":{"Monarch":{"xref_id":"0009873"}}}


id: PBO:0017680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-xylose 1-dehydrogenase (NADP+) (predicted)","termid":"PBO:0017680"}


id: GO:1900361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pentasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of pentasaccharide transport","termid":"GO:1900360"},{"relation_name":"negatively_regulates","term_name":"pentasaccharide transport","termid":"GO:2001100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of pentasaccharide transport","synonyms":[{"name":"down regulation of pentasaccharide transport","type":"exact"},{"name":"down-regulation of pentasaccharide transport","type":"exact"},{"name":"downregulation of pentasaccharide transport","type":"exact"},{"name":"inhibition of pentasaccharide transport","type":"narrow"}],"termid":"GO:1900361"}


id: MONDO:0017533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly type B","termid":"MONDO:0019674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postaxial polydactyly type B, unilateral","secondary_identifiers":["Orphanet:295167","icd11.foundation:154207037"],"termid":"MONDO:0017533","xrefs":{"Monarch":{"xref_id":"0017533"}}}


id: GO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class I PI3K activated via heterotrimeric G-proteins.","definition_xrefs":["PMID:11050418"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-4-phosphate kinase, class IB (obsolete GO:0004433)","synonyms":[{"name":"1-phosphatidylinositol-4-phosphate kinase, class IB","type":"exact"}],"termid":"GO:0004433"}


id: MONDO:0003744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma arising from the choroid, ciliary body, or the iris. It is characterized by the presence of spindle-shaped melanocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell melanoma","termid":"MONDO:0006427"},{"relation_name":"is_a","term_name":"uveal melanoma","termid":"MONDO:0006486"},{"relation_name":"is_a","term_name":"malignant spindle cell neoplasm","termid":"MONDO:0020663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"spindle cell intraocular melanoma","secondary_identifiers":["UMLS:C0279687","MEDGEN:76015","DOID:6037","NCIT:C7986"],"synonyms":[{"name":"spindle cell melanoma of the uvea","type":"exact"},{"name":"spindle cell melanoma of uvea","type":"exact"},{"name":"spindle cell uveal melanoma","type":"exact"},{"name":"uveal spindle cell melanoma","type":"exact"}],"termid":"MONDO:0003744","xrefs":{"Monarch":{"xref_id":"0003744"}}}


id: PBO:0063775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 2","termid":"PBO:0063775"}


id: PBO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ace2 Dependent Gene","termid":"PBO:0002356"}


id: MONDO:0004736
data:
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id: PBO:0043486
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id: MONDO:0800437
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id: PBO:0110425
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id: PBO:0053060
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id: FYPO:0006426
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id: FYECO:0000370
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id: GO:0021516
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id: MONDO:0018943
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id: PBO:0070466
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id: GO:0019727
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id: PBO:0084097
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id: PBO:0067682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 869, pseudogene","termid":"PBO:0067682"}


id: GO:0043031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of macrophage activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of macrophage activation","termid":"GO:0043030"},{"relation_name":"negatively_regulates","term_name":"macrophage activation","termid":"GO:0042116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage activation","synonyms":[{"name":"down regulation of macrophage activation","type":"exact"},{"name":"down-regulation of macrophage activation","type":"exact"},{"name":"downregulation of macrophage activation","type":"exact"},{"name":"inhibition of macrophage activation","type":"narrow"},{"name":"negative regulation of macrophage polarization","type":"exact"}],"termid":"GO:0043031"}


id: GO:1990893
data:
  {"annotated_genes":["SJAG_00207","SJAG_00646"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87520,111136],"is_not":false,"summary":null,"term":"GO:1990893"}]},"cv_name":"biological_process","definition":"The cell cycle process in which centromere chromatin structure is compacted prior to and during mitosis.","definition_xrefs":["PMID:21633354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"mitotic chromosome centromere condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic chromosome condensation at kinetochore","type":"exact"}],"termid":"GO:1990893","terms_by_termid":{"GO:1990893":null}}


id: GO:0061630
data:
  {"annotated_genes":["SJAG_04151","SJAG_00819","SJAG_02347","SJAG_04990","SJAG_02371","SJAG_04783","SJAG_05236","SJAG_01772","SJAG_02521","SJAG_04429","SJAG_03968","SJAG_03613","SJAG_03006","SJAG_01593","SJAG_02668","SJAG_02299","SJAG_02685","SJAG_05323","SJAG_01533","SJAG_01535","SJAG_01212","SJAG_01507","SJAG_02319","SJAG_03191","SJAG_02308","SJAG_03112","SJAG_01992","SJAG_00475","SJAG_00509","SJAG_04600","SJAG_04915","SJAG_03175","SJAG_01637","SJAG_00500","SJAG_00188","SJAG_00561","SJAG_03657","SJAG_00173","SJAG_03860","SJAG_02169","SJAG_03618","SJAG_01900","SJAG_01165","SJAG_01253","SJAG_00208","SJAG_00341","SJAG_04309","SJAG_05274","SJAG_00435","SJAG_03005","SJAG_03970","SJAG_04619","SJAG_02575","SJAG_01854","SJAG_01360","SJAG_04966","SJAG_00552","SJAG_05264","SJAG_02746","SJAG_00111","SJAG_03883","SJAG_03324","SJAG_02851","SJAG_00209","SJAG_03615","SJAG_03831"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79420,87530,87540,87609,87744,87828,88153,88415,88853,89060,89235,89303,89406,89718,90244,90581,91191,92272,93073,93859,94896,95316,96019,96104,96204,96286,98043,98895,99749,100679,100799,101361,102511,102895,102910,103773,103844,104431,104459,104712,104769,105369,106338,106420,107334,107470,108338,109104,109427,109428,109690,111537,112263,112838,113015,113106,113445,113767,114858,116146,116147,116645,116685,117873],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[115657,118280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[93858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[92207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S = X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb","PMID:22863777","GOC:BioGRID"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-protein transferase activity","termid":"GO:0004842"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase 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protein ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9009403","Reactome:R-HSA-6804942","Reactome:R-HSA-9755505","Reactome:R-HSA-5689111","Reactome:R-HSA-6804879","Reactome:R-HSA-8952382","Reactome:R-HSA-6790487","Reactome:R-HSA-1504190","Reactome:R-HSA-5246693","Reactome:R-HSA-5654672","Reactome:R-HSA-5632648","Reactome:R-HSA-1225956","Reactome:R-HSA-69015","Reactome:R-HSA-6798373","Reactome:R-HSA-8877003","Reactome:R-HSA-6807134","Reactome:R-HSA-9604629","GO:1904822","Reactome:R-HSA-9706354","Reactome:R-HSA-934604","Reactome:R-HSA-9755304","Reactome:R-HSA-8953946","Reactome:R-HSA-9009308","Reactome:R-HSA-9021523","Reactome:R-HSA-990526","Reactome:R-HSA-9759154","Reactome:R-HSA-4608852","Reactome:R-HSA-6804724","Reactome:R-HSA-9685195","Reactome:R-HSA-9686920","GO:1904264","Reactome:R-HSA-8956684","Reactome:R-HSA-9033485","Reactome:R-HSA-9762091","GO:0090302","Reactome:R-HSA-4641253","Reactome:R-HSA-8939706","Reactome:R-HSA-5658424","Reactome:R-HSA-5690827","Reactome:R-HSA-8854628","Reactome:R-HSA-8875431","Reactome:R-HSA-9011300","Reactome:R-HSA-5610737","Reactome:R-HSA-68946","Reactome:R-HSA-5682858","Reactome:R-HSA-8938773","Reactome:R-HSA-9705738","Reactome:R-HSA-8875183","Reactome:R-HSA-6782943","Reactome:R-HSA-6781867","Reactome:R-HSA-4641246","Reactome:R-HSA-8866546","Reactome:R-HSA-8866856","Reactome:R-HSA-8942101","Reactome:R-HSA-5635864","Reactome:R-HSA-3640861","Reactome:R-HSA-9733316","Reactome:R-HSA-4641129","Reactome:R-HSA-5654677","Reactome:R-HSA-8848829","Reactome:R-HSA-6807106","Reactome:R-HSA-5684071","Reactome:R-HSA-8854041","Reactome:R-HSA-936462","Reactome:R-HSA-9766645","Reactome:R-HSA-5635856","Reactome:R-HSA-8876258","Reactome:R-HSA-8948775","Reactome:R-HSA-4641159","Reactome:R-HSA-183036","Reactome:R-HSA-5654684","Reactome:R-HSA-6804441","Reactome:R-HSA-8952419","Reactome:R-HSA-5687081","Reactome:R-HSA-9759172","Reactome:R-HSA-5654679","Reactome:R-HSA-5674022","Reactome:R-HSA-201445","GO:0090622","Reactome:R-HSA-8939335","Reactome:R-HSA-8943003","Reactome:R-HSA-9686969","Reactome:R-HSA-6785361","Reactome:R-HSA-8854051","Reactome:R-HSA-9706356","Reactome:R-HSA-936475","Reactome:R-HSA-8867288","Reactome:R-HSA-6804253","Reactome:R-HSA-8938815","Reactome:R-HSA-9008076","Reactome:R-HSA-8943080","Reactome:R-HSA-8948832","Reactome:R-HSA-9708517","Reactome:R-HSA-3322429","Reactome:R-HSA-8943040","Reactome:R-HSA-8851011","Reactome:R-HSA-8956026"],"synonyms":[{"name":"E3","type":"broad"},{"name":"ER-associated E3 ligase","type":"related"},{"name":"protein ubiquitination activity","type":"exact"},{"name":"ubiquitin ligase activity","type":"exact"}],"termid":"GO:0061630","terms_by_termid":{"GO:0034450":null,"GO:0061630":null,"GO:0140850":null,"GO:0140851":null}}


id: MONDO:0011521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 1p36.","definition_xrefs":["DOID:0110882","PMID:19122664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 7","secondary_identifiers":["MEDGEN:381452","MESH:C565353","OMIM:605225","UMLS:C1854573"],"synonyms":[{"name":"IBD7","type":"exact"},{"name":"inflammatory bowel disease 7","type":"exact"},{"name":"inflammatory bowel disease type 7","type":"exact"}],"termid":"MONDO:0011521","xrefs":{"Monarch":{"xref_id":"0011521"}}}


id: GO:1902213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of prolactin signaling pathway.","definition_xrefs":["PMID:11773439","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of prolactin signaling pathway","termid":"GO:1902211"},{"relation_name":"positively_regulates","term_name":"prolactin signaling pathway","termid":"GO:0038161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of prolactin signaling pathway","synonyms":[{"name":"activation of PRL signaling pathway","type":"narrow"},{"name":"activation of prolactin signaling pathway","type":"narrow"},{"name":"activation of prolactin-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of PRL signaling pathway","type":"exact"},{"name":"positive regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"up regulation of PRL signaling pathway","type":"exact"},{"name":"up regulation of prolactin signaling pathway","type":"exact"},{"name":"up regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"up-regulation of PRL signaling pathway","type":"exact"},{"name":"up-regulation of prolactin signaling pathway","type":"exact"},{"name":"up-regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"upregulation of PRL signaling pathway","type":"exact"},{"name":"upregulation of prolactin signaling pathway","type":"exact"},{"name":"upregulation of prolactin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902213"}


id: GO:1902807
data:
  {"annotated_genes":["SJAG_01210","SJAG_02026","SJAG_00996","SJAG_03048","SJAG_00169","SJAG_03681","SJAG_05346","SJAG_01401","SJAG_00991","SJAG_00071","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88458,115346,108346,101111,101848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[109132,90817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[91668,108347,92831,98377,88459,91248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle phase transition","termid":"GO:1901988"},{"relation_name":"is_a","term_name":"regulation of cell cycle G1/S phase transition","termid":"GO:1902806"},{"relation_name":"negatively_regulates","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02026":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"down-regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"downregulation of cell cycle G1/S phase transition","type":"exact"},{"name":"inhibition of cell cycle G1/S phase transition","type":"narrow"}],"termid":"GO:1902807","terms_by_termid":{"GO:0031568":null,"GO:0031571":null,"GO:2000134":null}}


id: PBO:0047756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate hydrolase 1","termid":"PBO:0047756"}


id: GO:0008725
data:
  {"annotated_genes":["SJAG_01971","SJAG_05257"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74095,101072],"is_not":false,"summary":null,"term":"GO:0008725"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 3-methyladenine + H2O = DNA with abasic site + 3-methyladenine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methyladenine and the deoxyribose sugar to remove the 3-methyladenine, leaving an abasic site.","definition_xrefs":["PMID:9224623","EC:3.2.2.20","GOC:elh","PMID:10872450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-3-methylbase glycosylase activity","termid":"GO:0043733"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-5189"],"synonyms":[{"name":"3-methyladenine DNA glycosylase I","type":"related"},{"name":"DNA glycosidase I activity","type":"related"},{"name":"DNA-3-methyladenine glycosidase I activity","type":"related"},{"name":"DNA-3-methyladenine glycosylase I activity","type":"exact"},{"name":"deoxyribonucleate 3-methyladenine glycosidase I","type":"related"}],"termid":"GO:0008725","terms_by_termid":{"GO:0008725":null}}


id: PBO:0081371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 209, pseudogene","termid":"PBO:0081371"}


id: FYPO:0006088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is normal (i.e. indistinguishable from wild type) during a cellular response to DNA damage. The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA binding during cellular response to DNA damage","synonyms":[{"name":"normal DNA binding in response to DNA damage","type":"related"}],"termid":"FYPO:0006088"}


id: PBO:0049222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 5","termid":"PBO:0049222"}


id: MONDO:0017407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency, common variable, 10","termid":"MONDO:0014260"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"deficiency in anterior pituitary function - variable immunodeficiency syndrome","secondary_identifiers":["MEDGEN:1666981","Orphanet:293978","UMLS:C4751122","GARD:17353"],"synonyms":[{"name":"David syndrome","type":"exact"}],"termid":"MONDO:0017407","xrefs":{"Monarch":{"xref_id":"0017407"}}}


id: GO:1904969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a slow muscle cell from one site to another.","definition_xrefs":["GOC:TermGenie","GOC:ymb","PMID:14667409","PMID:15572133","GO_REF:0000091","PMID:25534553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell migration","termid":"GO:0110122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"slow muscle cell migration","synonyms":[{"name":"slow-twitch muscle cell migration","type":"exact"}],"termid":"GO:1904969"}


id: PR:P87138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.07c gene.","definition_xrefs":["UniProtKB:P87138","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A7.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.07c","synonyms":[{"name":"Spom972h-SPAC57A7.07c","type":"exact"}],"termid":"PR:P87138"}


id: PBO:0039601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member B pseudogene 2","termid":"PBO:0039601"}


id: MONDO:0019619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete duplication of the esophagus (obsolete MONDO:0019619)","secondary_identifiers":["Orphanet:91357"],"termid":"MONDO:0019619","xrefs":{"Monarch":{"xref_id":"0019619"}}}


id: SO:0000470
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Germline genomic DNA of an immunoglobulin/T-cell receptor gene including J-region with 5' UTR (SO:0000204) and 3' UTR (SO:0000205), also designated as J-segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_segment","termid":"SO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_gene_segment","synonyms":[{"name":"INSDC_feature:J_segment","type":"exact"},{"name":"J gene","type":"exact"},{"name":"J-GENE","type":"exact"}],"termid":"SO:0000470"}


id: PBO:0048742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 4","termid":"PBO:0048742"}


id: PBO:0088140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein sorting (VPS) protein; required for cytoplasm to vacuole targeting of proteins; VPS62 has a paralog, TDA6, that arose from the whole genome duplication","termid":"PBO:0088140"}


id: FYPO:0006713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of malonyl-CoA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular malonyl-CoA level","synonyms":[{"name":"increased cellular malonyl-CoA level during mitotic cell cycle","type":"related"},{"name":"increased cellular malonyl-CoA level during vegetative growth","type":"exact"},{"name":"increased malonyl-CoA accumulation","type":"related"}],"termid":"FYPO:0006713"}


id: PBO:0017562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein, Rad51 mediator Rad52 (previously Rad22)","termid":"PBO:0017562"}


id: MONDO:0018323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"HSD10 disease, neonatal type is the most severe form of HSD10 disease, a rare neurometabolic disorder. It is characterized by onset of severe metabolic/lactic acidosis, neurological and psychomotor delay, seizures and severe progressive hypertrophic cardiomyopathy in the neonatal period. Hepatic involvement and coagulopathy are rare. The disease is fatal within the first months of life.","definition_xrefs":["Orphanet:391457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"HSD10 mitochondrial disease","termid":"MONDO:0010327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"HSD10 disease, neonatal type","secondary_identifiers":["UMLS:C5680026","MEDGEN:1842355","GARD:17623"],"synonyms":[{"name":"2-methyl-3-hydroxybutyric aciduria, neonatal type","type":"exact"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase deficiency, neonatal type","type":"exact"},{"name":"HSD10 deficiency, neonatal type","type":"exact"},{"name":"MHBD deficiency, neonatal type","type":"exact"}],"termid":"MONDO:0018323","xrefs":{"Monarch":{"xref_id":"0018323"}}}


id: PBO:0111950
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DBF type","termid":"PBO:0111950"}


id: PBO:0048886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 5, pseudogene","termid":"PBO:0048886"}


id: GO:0051413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisone stimulus. Cortisone is a natural glucocorticoid steroid hormone that is metabolically convertible to cortisol. Cortisone is synthesized from cholesterol in the cortex of the adrenal gland under the stimulation of adrenocorticotropin hormone (ACTH). The main physiological effect of cortisone is on carbohydrate metabolism; it can stimulate increased glucose release from the liver, increased liver glycogen synthesis, and decreased utilization of glucose by the tissues.","definition_xrefs":["ISBN:0721662544","PMID:11276391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cortisone","synonyms":[{"name":"response to cortisone stimulus","type":"exact"}],"termid":"GO:0051413"}


id: FYPO:0006503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport","termid":"FYPO:0005744"},{"relation_name":"is_a","term_name":"abnormal protein localization during mating","termid":"FYPO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to actin fusion focus","synonyms":[{"name":"abnormal protein localisation to actin fusion focus","type":"exact"}],"termid":"FYPO:0006503"}


id: FYPO:0004355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein phosphorylation during mitosis","synonyms":[{"name":"increased protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during mitotic M phase","type":"related"},{"name":"increased protein phosphorylation during mitotic nuclear division","type":"exact"},{"name":"increased protein/peptide phosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0004355"}


id: PBO:0063751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 16","termid":"PBO:0063751"}


id: MONDO:0008136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"PAX6-related ocular dysgenesis","termid":"MONDO:0800183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"isolated optic nerve hypoplasia","secondary_identifiers":["OMIM:165550","MEDGEN:322281","NORD:1528","SCTID:724999003","UMLS:C1833797","Orphanet:637061","DOID:0111531","GARD:8419","icd11.foundation:609162974","Orphanet:137902"],"synonyms":[{"name":"Optic Nerve Hypoplasia","type":"exact"},{"name":"familial bilateral optic nerve hypoplasia","type":"exact"},{"name":"isolated optic nerve hypoplasia/aplasia","type":"related"},{"name":"optic nerve aplasia, bilateral","type":"related"},{"name":"optic nerve hypoplasia","type":"related"},{"name":"optic nerve hypoplasia, bilateral","type":"exact"},{"name":"optic nerve hypoplasia, familial bilateral","type":"exact"}],"termid":"MONDO:0008136","xrefs":{"Monarch":{"xref_id":"0008136"}}}


id: PBO:0083946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of coatomer; coatomer is a heptameric protein complex that together with Arf1p forms the COPI coat; involved in ER to Golgi transport of selective cargo","termid":"PBO:0083946"}


id: PBO:0072733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 3","termid":"PBO:0072733"}


id: PBO:0046055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F pseudogene 3","termid":"PBO:0046055"}


id: GO:1900782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving fumiquinazoline F.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline F metabolic process (obsolete GO:1900782)","synonyms":[{"name":"fumiquinazoline F metabolism","type":"exact"}],"termid":"GO:1900782"}


id: MONDO:0032787
data:
  {"annotated_genes":["SJAG_03597"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86479],"is_not":false,"summary":null,"term":"MONDO:0032787"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 12 with or without pancreatic agenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5193131","DOID:0081398","OMIM:618500","MEDGEN:1684550"],"synonyms":[{"name":"HOLOPROSENCEPHALY 12 WITH OR WITHOUT PANCREATIC AGENESIS","type":"related"},{"name":"HPE12","type":"related"},{"name":"holoprosencephaly 12, with or without pancreatic agenesis","type":"exact"}],"termid":"MONDO:0032787","terms_by_termid":{"MONDO:0032787":null},"xrefs":{"Monarch":{"xref_id":"0032787"}}}


id: FYPO:0001947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which progression through the mitotic cell cycle is arrested in anaphase under conditions where arrest does not normally occur, and sister chromatids have not separated. The unseparated chromosomes remain condensed.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell cycle arrest in mitotic anaphase, with unseparated sister chromatids (obsolete FYPO:0001947)","synonyms":[{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated sister chromatids, during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated, condensed chromosomes","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated, condensed sister chromatids","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in anaphase, with unseparated sister chromatids","type":"exact"},{"name":"absence of chromosome separation, abnormal mitotic anaphase arrest with condensed chromosomes","type":"exact"}],"termid":"FYPO:0001947"}


id: GO:0009074
data:
  {"annotated_genes":["SJAG_03743","SJAG_02734","SJAG_03312","SJAG_04842","SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97851],"is_not":false,"summary":null,"term":"GO:0009074"},{"annotations":[88020,96764,96763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[106245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006572"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00493":null,"SJAG_02734":null,"SJAG_03312":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aromatic amino acid family breakdown","type":"exact"},{"name":"aromatic amino acid family catabolism","type":"exact"},{"name":"aromatic amino acid family degradation","type":"exact"}],"termid":"GO:0009074","terms_by_termid":{"GO:0000949":null,"GO:0006572":null,"GO:0009074":null}}


id: GO:0004571
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66297,95214],"is_not":false,"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal (1->2)-linked alpha-D-mannose residues in an oligo-mannose oligosaccharide.","definition_xrefs":["GOC:bf","PMID:25092655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyl-oligosaccharide mannosidase activity","termid":"GO:0015924"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,2-alpha-mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9036012","Reactome:R-HSA-901074","Reactome:R-HSA-964737","Reactome:R-HSA-964825","Reactome:R-HSA-9036011","Reactome:R-HSA-901036","Reactome:R-HSA-9696807","KEGG_REACTION:R12479","EC:3.2.1.113","Reactome:R-HSA-964830","Reactome:R-HSA-6782685","Reactome:R-HSA-4793949","Reactome:R-HSA-901024","Reactome:R-HSA-9036008","Reactome:R-HSA-901039"],"synonyms":[{"name":"1,2-alpha-mannosidase","type":"related"},{"name":"1,2-alpha-mannosyl-oligosaccharide alpha-D-mannohydrolase activity","type":"related"},{"name":"Man9-mannosidase activity","type":"narrow"},{"name":"ManI activity","type":"narrow"},{"name":"exo-alpha-1,2-mannanase activity","type":"related"},{"name":"glycoprotein processing mannosidase I","type":"related"},{"name":"mannose-9 processing alpha-mannosidase activity","type":"narrow"},{"name":"mannosidase 1A activity","type":"narrow"},{"name":"mannosidase 1B activity","type":"narrow"},{"name":"mannosidase I","type":"related"}],"termid":"GO:0004571","terms_by_termid":{"GO:0004571":null}}


id: GO:0045678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of R7 cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R7 cell differentiation","termid":"GO:0045676"},{"relation_name":"is_a","term_name":"positive regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110117"},{"relation_name":"positively_regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of R7 cell differentiation","synonyms":[{"name":"activation of R7 differentiation","type":"narrow"},{"name":"positive regulation of R7 differentiation","type":"exact"},{"name":"stimulation of R7 differentiation","type":"narrow"},{"name":"up regulation of R7 differentiation","type":"exact"},{"name":"up-regulation of R7 differentiation","type":"exact"},{"name":"upregulation of R7 differentiation","type":"exact"}],"termid":"GO:0045678"}


id: SO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 57 to 71 nucleotide RNA that is a component of the U7 small nuclear ribonucleoprotein complex (U7 snRNP). The U7 snRNP is required for histone pre-mRNA processing.","definition_xrefs":["PMID:15526162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U7_snRNA","synonyms":[{"name":"U7 small nuclear RNA","type":"exact"},{"name":"U7 snRNA","type":"exact"},{"name":"small nuclear RNA U7","type":"exact"},{"name":"snRNA U7","type":"exact"}],"termid":"SO:0002338"}


id: PBO:0089638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Adg3","termid":"PBO:0089638"}


id: MONDO:0007799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatemic bone disease","secondary_identifiers":["MESH:C564145","MEDGEN:333534","UMLS:C1840321","OMIM:146350"],"synonyms":[{"name":"HBD","type":"related"},{"name":"hypophosphatemic bone disease","type":"exact"}],"termid":"MONDO:0007799","xrefs":{"Monarch":{"xref_id":"0007799"}}}


id: GO:0036502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing, in mammals, Derlin-1 and VCP-interacting membrane protein (VIMP). The complex links the p97/VCP-containing ATPase complex with Derlin-1 during translocation of protein substrates from the endoplasmic reticulum to the cytosol for degradation by the cytosolic proteasome.","definition_xrefs":["PMID:15215856","GOC:PARL","PMID:16186510","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005789","GO:0032991","GO:0005783"],"is_obsolete":false,"name":"Derlin-1-VIMP complex","synonyms":[{"name":"Derlin-1/VIMP complex","type":"exact"}],"termid":"GO:0036502"}


id: PR:P0CT70
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L2-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.13c","secondary_identifiers":["UniProtKB:P0CT70"],"synonyms":[{"name":"K37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"K5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"KD4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RPL8","type":"exact"}],"termid":"PR:P0CT70"}


id: SO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the coding sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_variant","termid":"SO:0001791"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_sequence_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html","SO:0001581","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:coding_sequence_variant","type":"exact"},{"name":"Seattleseq:coding","type":"exact"},{"name":"VAAST:coding_sequence_variant","type":"exact"},{"name":"VEP:coding_sequence_variant","type":"exact"},{"name":"coding sequence variant","type":"exact"},{"name":"coding variant","type":"exact"},{"name":"codon variant","type":"exact"},{"name":"codon_variant","type":"exact"},{"name":"snpEff:CDS","type":"exact"},{"name":"snpEff:CODON_CHANGE","type":"related"}],"termid":"SO:0001580"}


id: PBO:0042705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 4","termid":"PBO:0042705"}


id: PBO:0068934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 177, pseudogene","termid":"PBO:0068934"}


id: GO:1902367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Notch signaling pathway involved in somitogenesis.","definition_xrefs":["PMID:21795391","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Notch signaling pathway","termid":"GO:0045746"},{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway involved in somitogenesis","termid":"GO:1902366"},{"relation_name":"negatively_regulates","term_name":"Notch signaling pathway involved in somitogenesis","termid":"GO:1902359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Notch signaling pathway involved in somitogenesis","synonyms":[{"name":"down regulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch signaling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch signaling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch signaling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"inhibition of N signaling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of N signaling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of N signalling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of N signalling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch receptor signaling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch receptor signalling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch signaling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch signaling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch signalling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch signalling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch-receptor signaling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch-receptor signalling pathway involved in somitogenesis","type":"narrow"},{"name":"negative regulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:1902367"}


id: MONDO:1011075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in Siberian chipmunk.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, Siberian chipmunk","secondary_identifiers":["OMIA:001033-64680"],"termid":"MONDO:1011075","xrefs":{"Monarch":{"xref_id":"1011075"}}}


id: PBO:0042663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 19","termid":"PBO:0042663"}


id: PR:Q9USQ5-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ornithine decarboxylase antizyme (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9USQ5-1.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USQ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine decarboxylase antizyme (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9USQ5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme isoform 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9USQ5-1"],"synonyms":[{"name":"Spom972h-spa1/iso:1","type":"exact"}],"termid":"PR:Q9USQ5-1"}


id: GO:0035159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that a tube in an open tracheal system is of the correct length.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube size, open tracheal system","termid":"GO:0035151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube length, open tracheal system","synonyms":[{"name":"regulation of tracheal tube length","type":"exact"},{"name":"tracheal tube elongation","type":"narrow"}],"termid":"GO:0035159"}


id: PBO:0055886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC8C divergent transcript","termid":"PBO:0055886"}


id: GO:0001616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ghrelin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:17983853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"growth hormone secretagogue receptor activity","synonyms":[{"name":"ghrelin receptor activity","type":"exact"}],"termid":"GO:0001616"}


id: PBO:0025429
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichothiodystrophy","termid":"PBO:0025429"}


id: PBO:0028871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)_tail_length","termid":"PBO:0028871"}


id: PBO:0029249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_filaments_present_in_increased_numbers","termid":"PBO:0029249"}


id: FYPO:0005446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific molecular function is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished molecular function","synonyms":[{"name":"molecular function abolished","type":"exact"}],"termid":"FYPO:0005446"}


id: CHEBI:49703
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latrunculin B","termid":"CHEBI:49703"}


id: MONDO:0043297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Vibrio vulnificus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vibrio infectious disease","termid":"MONDO:0007014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vibrio vulnificus infectious disease","secondary_identifiers":["MEDGEN:220886","SCTID:402965002","UMLS:C1274377","MESH:C536348"],"synonyms":[{"name":"Vibrio vulnificus caused disease or disorder","type":"exact"},{"name":"Vibrio vulnificus disease or disorder","type":"exact"},{"name":"Vibrio vulnificus infectious disease","type":"exact"},{"name":"vibrio vulnificus infection","type":"exact"},{"name":"vibrio vulnificus infectious disease","type":"exact"}],"termid":"MONDO:0043297","xrefs":{"Monarch":{"xref_id":"0043297"}}}


id: PBO:0004547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAVE complex subunit Rav1","termid":"PBO:0004547"}


id: GO:0060614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate or extent of mammary gland development in the male by an androgen binding to its receptor, causing a change in state or activity of a cell.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mammary gland development in males by androgen receptor signaling pathway (obsolete GO:0060614)","synonyms":[{"name":"negative regulation of mammary gland development in males by androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060614"}


id: GO:2000422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"is_a","term_name":"regulation of eosinophil migration","termid":"GO:2000416"},{"relation_name":"regulates","term_name":"eosinophil chemotaxis","termid":"GO:0048245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil chemotaxis","termid":"GO:2000422"}


id: PBO:0054764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2176","termid":"PBO:0054764"}


id: MONDO:0014311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive cerebellar ataxia-epilepsy-intellectual disability syndrome in which the cause of the disease is a mutation in the RUBCN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome","termid":"MONDO:0018446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 15","secondary_identifiers":["Orphanet:404499","UMLS:C3810326","DOID:0080057","GARD:17678","OMIM:615705","MEDGEN:816656"],"synonyms":[{"name":"RUBCN autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome","type":"exact"},{"name":"RUBCN autosomal recessive cerebellar ataxia-epilepsy-intellectual disability syndrome","type":"exact"},{"name":"SCAR15","type":"exact"},{"name":"Salih ataxia","type":"related"},{"name":"autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome caused by mutation in RUBCN","type":"exact"},{"name":"autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome due to KIAA0226 deficiency","type":"related"},{"name":"autosomal recessive cerebellar ataxia-epilepsy-intellectual disability syndrome caused by mutation in RUBCN","type":"exact"},{"name":"autosomal recessive cerebellar ataxia-epilepsy-intellectual disability syndrome due to RUBCN deficiency","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia type 15","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 15","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 15","type":"exact"}],"termid":"MONDO:0014311","xrefs":{"Monarch":{"xref_id":"0014311"}}}


id: MONDO:0030938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 52","secondary_identifiers":["GARD:16436","MEDGEN:1785685","UMLS:C5543094","OMIM:619202","DOID:0112270"],"synonyms":[{"name":"SPGF52","type":"exact"},{"name":"spermatogenic failure 52","type":"exact"}],"termid":"MONDO:0030938","xrefs":{"Monarch":{"xref_id":"0030938"}}}


id: GO:1900659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of emericellamide biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of emericellamide biosynthetic process","termid":"GO:1900658"},{"relation_name":"negatively_regulates","term_name":"emericellamide biosynthetic process","termid":"GO:1900557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of emericellamide biosynthetic process","synonyms":[{"name":"down regulation of emericellamide anabolism","type":"exact"},{"name":"down regulation of emericellamide biosynthesis","type":"exact"},{"name":"down regulation of emericellamide biosynthetic process","type":"exact"},{"name":"down regulation of emericellamide formation","type":"exact"},{"name":"down regulation of emericellamide synthesis","type":"exact"},{"name":"down-regulation of emericellamide anabolism","type":"exact"},{"name":"down-regulation of emericellamide biosynthesis","type":"exact"},{"name":"down-regulation of emericellamide biosynthetic process","type":"exact"},{"name":"down-regulation of emericellamide formation","type":"exact"},{"name":"down-regulation of emericellamide synthesis","type":"exact"},{"name":"downregulation of emericellamide anabolism","type":"exact"},{"name":"downregulation of emericellamide biosynthesis","type":"exact"},{"name":"downregulation of emericellamide biosynthetic process","type":"exact"},{"name":"downregulation of emericellamide formation","type":"exact"},{"name":"downregulation of emericellamide synthesis","type":"exact"},{"name":"inhibition of emericellamide anabolism","type":"exact"},{"name":"inhibition of emericellamide biosynthesis","type":"exact"},{"name":"inhibition of emericellamide biosynthetic process","type":"narrow"},{"name":"inhibition of emericellamide formation","type":"exact"},{"name":"inhibition of emericellamide synthesis","type":"exact"},{"name":"negative regulation of emericellamide anabolism","type":"exact"},{"name":"negative regulation of emericellamide biosynthesis","type":"exact"},{"name":"negative regulation of emericellamide formation","type":"exact"},{"name":"negative regulation of emericellamide synthesis","type":"exact"}],"termid":"GO:1900659"}


id: GO:0042566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, membrane-bounded organelle found in some anaerobic protozoa, which participates in ATP and molecular hydrogen formation.","definition_xrefs":["PMID:11293569","GOC:jl","PMID:11197234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"hydrogenosome","secondary_identifiers":["Wikipedia:Hydrogenosome"],"termid":"GO:0042566"}


id: FYPO:0006238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to centromere","synonyms":[{"name":"decreased protein localisation to centromere","type":"exact"},{"name":"decreased protein localisation to chromosome, centromeric region","type":"exact"},{"name":"decreased protein localization to chromosome, centric region","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric region","type":"exact"},{"name":"reduced protein localization to centromere","type":"exact"}],"termid":"FYPO:0006238"}


id: PBO:0082967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein required for replication of Brome mosaic virus; S. cerevisiae is a model system for studying replication of positive-strand RNA viruses in their natural hosts","termid":"PBO:0082967"}


id: PR:Q10256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mud1 gene.","definition_xrefs":["UniProtKB:Q10256","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein mud1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.08","synonyms":[{"name":"DNA-damage-inducible protein DDI1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mud1","type":"exact"},{"name":"UBA domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10256"}


id: PBO:0081903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 860","termid":"PBO:0081903"}


id: SO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of six or seven consecutive residues that contains two H-bonds.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"schellmann_loop","secondary_identifiers":["BS:00226"],"synonyms":[{"name":"paperclip","type":"related"},{"name":"paperclip loop","type":"related"},{"name":"schellmann loop","type":"exact"}],"termid":"SO:0001123"}


id: FYPO:0000963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on hydroxyurea","synonyms":[{"name":"normal cell population growth in presence of hydroxyurea","type":"exact"},{"name":"normal cell population growth on HU","type":"exact"},{"name":"normal cell population growth on hydroxyurea","type":"exact"},{"name":"normal vegetative cell population growth on hydroxyurea","type":"exact"}],"termid":"FYPO:0000963"}


id: PBO:0041611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary associated calcium binding coiled-coil 1","termid":"PBO:0041611"}


id: MOD:00193
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-oxoalanine.","definition_xrefs":["PubMed:9478923","RESID:AA0185#CYS","Unimod:402#C","PubMed:7628016","DeltaMass:350","PubMed:14563551","PubMed:8681943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-3-oxoalanine","termid":"MOD:01169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-oxoalanine (Cys)","synonyms":[{"name":"(S)-2-amino-3-oxopropanoic acid","type":"exact"},{"name":"2-amino-3-oxopropionic acid","type":"exact"},{"name":"C(alpha)-formylglycine","type":"related"},{"name":"L-3-oxoalanine","type":"exact"},{"name":"L-amino-malonic acid semialdehyde","type":"exact"},{"name":"L-aminomalonaldehydic acid","type":"exact"},{"name":"L-serinesemialdehyde","type":"related"},{"name":"MOD_RES 3-oxoalanine (Cys)","type":"exact"},{"name":"Oxala(Cys)","type":"exact"}],"termid":"MOD:00193"}


id: MONDO:0004967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukemia with an acute onset, characterized by the presence of lymphoblasts in the bone marrow and the peripheral blood. It includes the acute B lymphoblastic leukemia and acute T lymphoblastic leukemia.","definition_xrefs":["NCIT:C3167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"precursor lymphoblastic lymphoma/leukemia","termid":"MONDO:0003538"},{"relation_name":"is_a","term_name":"neoplasm of immature B and T cells","termid":"MONDO:0005168"},{"relation_name":"is_a","term_name":"lymphoid leukemia","termid":"MONDO:0005402"},{"relation_name":"is_a","term_name":"acute leukemia","termid":"MONDO:0010643"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acute lymphoblastic leukemia","secondary_identifiers":["HP:0006721","ICD9:204.9","Orphanet:513","UMLS:C0023449","GARD:522","DOID:9952","ICD9:204","ICDO:9835/3","MEDGEN:7317","EFO:0000220","ICD9:204.0","SCTID:91857003","ICD9:204.00"],"synonyms":[{"name":"ALL","type":"exact"},{"name":"ALL - acute lymphocytic leukaemia","type":"exact"},{"name":"ALL - acute lymphocytic leukemia","type":"exact"},{"name":"acute lymphoblastic leukaemia (ALL)","type":"exact"},{"name":"acute lymphoblastic leukaemia (disease)","type":"exact"},{"name":"acute lymphoblastic leukemia","type":"exact"},{"name":"acute lymphoblastic leukemia (ALL)","type":"exact"},{"name":"acute lymphoblastic leukemia (disease)","type":"exact"},{"name":"acute lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"acute lymphocytic leukaemia","type":"exact"},{"name":"acute lymphocytic leukemia","type":"exact"},{"name":"acute lymphocytic leukemias","type":"exact"},{"name":"acute lymphogenous leukaemia","type":"exact"},{"name":"acute lymphogenous leukemia","type":"exact"},{"name":"acute lymphoid leukaemia","type":"exact"},{"name":"acute lymphoid leukemia","type":"exact"},{"name":"leukemia, lymphoblastic, malignant","type":"exact"},{"name":"lymphoblastic leukaemia","type":"broad"},{"name":"lymphoblastic leukemia","type":"broad"},{"name":"lymphoblastic leukemia, acute","type":"exact"},{"name":"precursor Lymphoblasic leukaemia","type":"exact"},{"name":"precursor Lymphoblasic leukemia","type":"exact"},{"name":"precursor cell lymphoblastic leukaemia","type":"exact"},{"name":"precursor cell lymphoblastic leukemia","type":"exact"},{"name":"precursor lymphoblastic leukaemia","type":"exact"},{"name":"precursor lymphoblastic leukemia","type":"exact"}],"termid":"MONDO:0004967","xrefs":{"Monarch":{"xref_id":"0004967"}}}


id: GO:0102435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myricetin + S-adenosyl-L-methionine = 7-O-methylmyricetin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"myricetin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13910"],"termid":"GO:0102435"}


id: PR:O60098
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC14F5.01 gene.","definition_xrefs":["UniProtKB:O60098","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14F5.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.01","synonyms":[{"name":"Spom972h-SPBC14F5.01","type":"exact"}],"termid":"PR:O60098"}


id: GO:0010913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of sterigmatocystin biosynthesis. Sterigmatocystin biosynthetic processes are the chemical reactions and pathways resulting in the formation of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"sterigmatocystin biosynthetic process","termid":"GO:0045461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of sterigmatocystin biosynthetic process","termid":"GO:0010913"}


id: PBO:0057707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1294","termid":"PBO:0057707"}


id: GO:0070245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thymocyte death by apoptotic process.","definition_xrefs":["GOC:add","ISBN:0781765196","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of thymocyte apoptotic process","termid":"GO:0070243"},{"relation_name":"positively_regulates","term_name":"thymocyte apoptotic process","termid":"GO:0070242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thymocyte apoptotic process","synonyms":[{"name":"activation of thymocyte apoptosis","type":"narrow"},{"name":"positive regulation of immature T cell apoptosis","type":"related"},{"name":"positive regulation of thymocyte apoptosis","type":"narrow"},{"name":"stimulation of thymocyte apoptosis","type":"narrow"},{"name":"up regulation of thymocyte apoptosis","type":"exact"},{"name":"up-regulation of thymocyte apoptosis","type":"exact"},{"name":"upregulation of thymocyte apoptosis","type":"exact"}],"termid":"GO:0070245"}


id: GO:0036420
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of mycolate outer membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:md","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of cell outer membrane","termid":"GO:0031244"},{"relation_name":"part_of","term_name":"mycolate outer membrane","termid":"GO:0036407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of mycolate outer membrane","synonyms":[{"name":"extrinsic to MOM","type":"exact"},{"name":"extrinsic to mycolate outer membrane","type":"narrow"},{"name":"extrinsic to mycomembrane","type":"exact"}],"termid":"GO:0036420"}


id: GO:0047338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-xylose 1-phosphate + UTP = UDP-D-xylose + diphosphate.","definition_xrefs":["EC:2.7.7.11","MetaCyc:2.7.7.11-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","termid":"GO:0051748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"UTP:xylose-1-phosphate uridylyltransferase activity","secondary_identifiers":["RHEA:18389"],"synonyms":[{"name":"UDP-xylose pyrophosphorylase activity","type":"related"},{"name":"UTP-xylose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:alpha-D-xylose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"uridine diphosphoxylose pyrophosphorylase activity","type":"related"},{"name":"uridylyltransferase, xylose 1-phosphate","type":"related"},{"name":"xylose 1-phosphate uridylyltransferase activity","type":"related"},{"name":"xylose-1-phosphate uridylyltransferase activity","type":"related"}],"termid":"GO:0047338"}


id: PBO:0058877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10393","termid":"PBO:0058877"}


id: GO:0050665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"},{"relation_name":"is_a","term_name":"reactive oxygen species biosynthetic process","termid":"GO:1903409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide biosynthetic process","synonyms":[{"name":"H2O2 biosynthetic process","type":"exact"},{"name":"hydrogen peroxide anabolism","type":"exact"},{"name":"hydrogen peroxide biosynthesis","type":"exact"},{"name":"hydrogen peroxide formation","type":"exact"},{"name":"hydrogen peroxide generation","type":"exact"},{"name":"hydrogen peroxide synthesis","type":"exact"}],"termid":"GO:0050665"}


id: GO:0045433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during wing vibration where the male insect produces a species-specific acoustic signal called a love song.","definition_xrefs":["GOC:mtg_sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"},{"relation_name":"part_of","term_name":"male courtship behavior, veined wing vibration","termid":"GO:0016545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, veined wing generated song production","synonyms":[{"name":"male courtship behavior, song production","type":"broad"},{"name":"male courtship behaviour, song production","type":"broad"},{"name":"male courtship behaviour, veined wing generated song production","type":"exact"}],"termid":"GO:0045433"}


id: FYECO:0000170
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which hydroxyurea was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ HU","synonyms":[{"name":"hydroxyurea added","type":"exact"}],"termid":"FYECO:0000170"}


id: PBO:0034757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex alpha subunit Alp3","termid":"PBO:0034757"}


id: PBO:0059721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 29","termid":"PBO:0059721"}


id: PBO:0087958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane protein; subunit of the glycosylphosphatidylinositol transamidase complex that adds GPIs to newly synthesized proteins; human PIG-S homolog","termid":"PBO:0087958"}


id: PBO:0083592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF Q0017","termid":"PBO:0083592"}


id: PBO:0045353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOP1 leucine zipper like protein B","termid":"PBO:0045353"}


id: PATO:0000997
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000997 relative viscosity value (obsolete PATO:0000997)","termid":"PATO:0000997"}


id: MONDO:0005780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any infection caused by a virus of the genus Hantavirus, which is transmitted by aerosolized rodent excreta or rodent bites, that can result in a variety of clinical manifestations from hemorrhagic fever with renal syndrome to a pulmonary syndrome.","definition_xrefs":["NCIT:C3899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bunyaviridae infectious disease","termid":"MONDO:0021641"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hantavirus infectious disease","secondary_identifiers":["SCTID:359761005","EFO:0007295","MESH:D018778","MEDGEN:67028","UMLS:C0242994","MONDO:0042492","ICD9:079.81"],"synonyms":[{"name":"Hantavirus caused disease or disorder","type":"exact"},{"name":"Hantavirus disease or disorder","type":"exact"},{"name":"Hantavirus infection","type":"exact"},{"name":"Hantavirus infectious disease","type":"exact"},{"name":"disease caused by hantavirus","type":"related"},{"name":"disease due to hantavirus","type":"exact"},{"name":"infections, Hantavirus","type":"related"}],"termid":"MONDO:0005780","xrefs":{"Monarch":{"xref_id":"0005780"}}}


id: PBO:0038486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCB10 pseudogene 1","termid":"PBO:0038486"}


id: FYPO:0002440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cable distribution is abnormal. The process normally establishes the spatial arrangement of actin cables within the cell. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0004803"],"is_obsolete":false,"name":"abnormal actin cable distribution","synonyms":[{"name":"abnormal actin cable distribution during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable distribution during vegetative growth","type":"exact"},{"name":"abnormal actin cable localization","type":"related"},{"name":"abnormal formin-nucleated actin cable distribution","type":"exact"}],"termid":"FYPO:0002440"}


id: SO:0000858
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a kind of homology where divergence occurred after a speciation event.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homologous","termid":"SO:0000857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous","termid":"SO:0000858"}


id: GO:0006436
data:
  {"annotated_genes":["SJAG_01522","SJAG_04840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95406],"is_not":false,"summary":null,"term":"GO:0006436"},{"annotations":[96795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070183"}]},"cv_name":"biological_process","definition":"The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. The tryptophanyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a tryptophan-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01522":null,"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tryptophanyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006436","terms_by_termid":{"GO:0006436":null,"GO:0070183":null}}


id: GO:0032448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA region containing a hairpin. A hairpin structure forms when a DNA strand folds back on itself and intrachain base pairing occurs between inverted repeat sequences.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DNA hairpin binding","termid":"GO:0032448"}


id: PBO:0086773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cell periphery","termid":"PBO:0086773"}


id: GO:1903902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral life cycle.","definition_xrefs":["GOC:TermGenie","PMID:18005716","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"positively_regulates","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral life cycle","synonyms":[{"name":"activation of lytic viral life cycle","type":"related"},{"name":"activation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"activation of viral infectious cycle","type":"related"},{"name":"activation of viral life cycle","type":"narrow"},{"name":"activation of viral replication","type":"related"},{"name":"positive regulation of lytic viral life cycle","type":"related"},{"name":"positive regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"positive regulation of viral infectious cycle","type":"related"},{"name":"positive regulation of viral replication","type":"related"},{"name":"up regulation of lytic viral life cycle","type":"related"},{"name":"up regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"up regulation of viral infectious cycle","type":"related"},{"name":"up regulation of viral life cycle","type":"exact"},{"name":"up regulation of viral replication","type":"related"},{"name":"up-regulation of lytic viral life cycle","type":"related"},{"name":"up-regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"up-regulation of viral infectious cycle","type":"related"},{"name":"up-regulation of viral life cycle","type":"exact"},{"name":"up-regulation of viral replication","type":"related"},{"name":"upregulation of lytic viral life cycle","type":"related"},{"name":"upregulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"upregulation of viral infectious cycle","type":"related"},{"name":"upregulation of viral life cycle","type":"exact"},{"name":"upregulation of viral replication","type":"related"}],"termid":"GO:1903902"}


id: PBO:0046034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 2","termid":"PBO:0046034"}


id: PBO:0053165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDOC1 regulator of NFKB signaling","termid":"PBO:0053165"}


id: PBO:0075651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 7 pseudogene 1","termid":"PBO:0075651"}


id: PBO:0076645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 2","termid":"PBO:0076645"}


id: PBO:0084889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial transcription elongation factor; DEAD-box protein; required for efficient splicing of mitochondrial Group I and II introns; non-polar RNA helicase that also facilities strand annealing; promotes RNA folding by stabilizing an early assembly intermediate","termid":"PBO:0084889"}


id: GO:1903360
data:
  {"annotated_genes":["SJAG_04947","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99582,104016],"is_not":false,"summary":null,"term":"GO:1903360"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a lateral cortical node.","definition_xrefs":["GOC:TermGenie","PMID:25009287","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to lateral cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in lateral cortical node","type":"exact"},{"name":"protein localisation to lateral cortical node","type":"exact"},{"name":"protein localization in lateral cortical node","type":"exact"}],"termid":"GO:1903360","terms_by_termid":{"GO:1903360":null}}


id: PBO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.14","termid":"PBO:0001001"}


id: PBO:0091987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive poison Wtf23","termid":"PBO:0091987"}


id: GO:0046915
data:
  {"annotated_genes":["SJAG_03079","SJAG_02968","SJAG_01007","SJAG_04675","SJAG_02399","SJAG_04260","SJAG_04185","SJAG_01990","SJAG_03850","SJAG_01493","SJAG_00328","SJAG_04737","SJAG_01119","SJAG_01803","SJAG_04246","SJAG_04096","SJAG_02473","SJAG_04867","SJAG_03528","SJAG_04830","SJAG_00222","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[94832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015086"},{"annotations":[100975,61699,87457,114035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005375"},{"annotations":[99983,103283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015093"},{"annotations":[91959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061840"},{"annotations":[115443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044750"},{"annotations":[103660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000006"},{"annotations":[97581,112657,113232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005381"},{"annotations":[90219,103284,94833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005384"},{"annotations":[90713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[107322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[107323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[103800,100720,89967,93276,93277,113783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005385"}]},"cv_name":"molecular_function","definition":"Enables the transfer of transition metal ions from one side of a membrane to the other. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_01007":null,"SJAG_01078":null,"SJAG_01119":null,"SJAG_01493":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02399":null,"SJAG_02473":null,"SJAG_02968":null,"SJAG_03079":null,"SJAG_03528":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04185":null,"SJAG_04246":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04737":null,"SJAG_04830":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"transition metal ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0046915","terms_by_termid":{"GO:0000006":null,"GO:0005375":null,"GO:0005381":null,"GO:0005384":null,"GO:0005385":null,"GO:0010486":null,"GO:0015086":null,"GO:0015093":null,"GO:0015410":null,"GO:0043682":null,"GO:0044750":null,"GO:0061840":null,"GO:0140581":null}}


id: GO:0046354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannan, the main hemicellulose of soft (coniferous) wood, made up of D-mannose, D-glucose and D-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"mannan biosynthetic process","synonyms":[{"name":"mannan anabolism","type":"exact"},{"name":"mannan biosynthesis","type":"exact"},{"name":"mannan formation","type":"exact"},{"name":"mannan synthesis","type":"exact"}],"termid":"GO:0046354"}


id: GO:0060372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the polarizing direction towards the resting potential in an atrial cardiomyocyte.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell membrane repolarization","termid":"GO:0099623"},{"relation_name":"regulates","term_name":"atrial cardiac muscle cell membrane repolarization","termid":"GO:0099624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrial cardiac muscle cell membrane repolarization","synonyms":[{"name":"atrial repolarization","type":"related"},{"name":"electrocardiogram QRS complex","type":"related"},{"name":"regulation of atrial cardiac muscle cell repolarization","type":"exact"},{"name":"regulation of atrial cardiomyocyte membrane repolarization","type":"exact"}],"termid":"GO:0060372"}


id: PBO:0074322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCA4 interacting SWI/SNF chromatin remodeling complex scaffold lncRNA","termid":"PBO:0074322"}


id: PBO:0016071
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe mPR1","termid":"PBO:0016071"}


id: GO:0050947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of early stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of melanocyte differentiation","termid":"GO:0045635"},{"relation_name":"is_a","term_name":"regulation of early stripe melanocyte differentiation","termid":"GO:0050939"},{"relation_name":"negatively_regulates","term_name":"early stripe melanocyte differentiation","termid":"GO:0050933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of early stripe melanocyte differentiation","synonyms":[{"name":"down regulation of early stripe melanocyte differentiation","type":"exact"},{"name":"down-regulation of early stripe melanocyte differentiation","type":"exact"},{"name":"downregulation of early stripe melanocyte differentiation","type":"exact"},{"name":"inhibition of early stripe melanocyte differentiation","type":"narrow"},{"name":"negative regulation of early stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050947"}


id: GO:0160226
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligosaccharyltransferase complex that contains STT3A as the catalytic subunit.","definition_xrefs":["PMID:31831667","PMID:39509507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharyltransferase complex","termid":"GO:0008250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005789","GO:0005737","GO:0005783","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"oligosaccharyltransferase complex A","synonyms":[{"name":"OST-A","type":"exact"}],"termid":"GO:0160226"}


id: PBO:0067338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 431, pseudogene","termid":"PBO:0067338"}


id: PBO:0052492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 6","termid":"PBO:0052492"}


id: PBO:0017486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actively_participates_in","termid":"PBO:0017486"}


id: GO:1903108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription occurring in the mitochondrion.","definition_xrefs":["GO_REF:0000058","PMID:21357609","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"regulation of mitochondrial gene expression","termid":"GO:0062125"},{"relation_name":"regulates","term_name":"mitochondrial transcription","termid":"GO:0006390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0010467","GO:0006351","GO:0140053"],"is_obsolete":false,"name":"regulation of mitochondrial transcription","synonyms":[{"name":"regulation of transcription from mitochondrial promoter","type":"exact"}],"termid":"GO:1903108"}


id: MONDO:0006526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A urticaria with a basis in a pathological type I hypersensitivity reaction.","definition_xrefs":["MONDO:patterns/allergic_form_of_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"allergic urticaria","secondary_identifiers":["ICD10CM:L50.0","EFO:1000669","SCTID:40178009","Wikipedia:Urticaria#Allergic_urticaria","UMLS:C0149526","ICD9:708.0","MEDGEN:508394","DOID:10612"],"synonyms":[{"name":"allergic form of urticaria","type":"exact"},{"name":"allergic form of urticaria (disease)","type":"exact"},{"name":"allergic urticaria (disease)","type":"exact"}],"termid":"MONDO:0006526","xrefs":{"Monarch":{"xref_id":"0006526"}}}


id: GO:2001029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellular glucuronidation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular glucuronidation (obsolete GO:2001029)","synonyms":[{"name":"regulation of cellular glucuronide biosynthesis","type":"exact"},{"name":"regulation of cellular glucuronide biosynthetic process","type":"exact"},{"name":"regulation of cellular glucuronoside biosynthesis","type":"exact"},{"name":"regulation of cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:2001029"}


id: PBO:0041262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q B chain","termid":"PBO:0041262"}


id: PBO:0080897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta","termid":"PBO:0080897"}


id: GO:0043914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + sulfur = hydrogen sulfide + NADP+.","definition_xrefs":["GOC:jl","PMID:17449625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"NADPH:sulfur oxidoreductase activity","secondary_identifiers":["EC:1.8.1.18"],"synonyms":[{"name":"CoA-dependent NAD(P)H sulfur oxidoreductase activity","type":"exact"},{"name":"NAD(P)H elemental sulfur oxidoreductase activity","type":"exact"},{"name":"NAD(P)H sulfur oxidoreductase activity","type":"exact"},{"name":"NAD(P)H sulphur oxidoreductase activity","type":"exact"},{"name":"NAD(P)H:sulfur oxidoreductase activity","type":"exact"},{"name":"NADPH:sulphur oxidoreductase activity","type":"exact"},{"name":"NSR","type":"exact"},{"name":"coenzyme A-dependent NAD(P)H sulfur oxidoreductase activity","type":"exact"}],"termid":"GO:0043914"}


id: SO:0001238
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The tanscription start site that is most frequently used for transcription of a gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"TSS","termid":"SO:0000315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major_TSS","synonyms":[{"name":"major TSS","type":"exact"},{"name":"major transcription start site","type":"exact"}],"termid":"SO:0001238"}


id: MONDO:0022839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"HIV infectious disease","termid":"MONDO:0005109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital human immunodeficiency virus","secondary_identifiers":["UMLS:C0520783","MEDGEN:636232"],"synonyms":[{"name":"congenital HIV","type":"related"},{"name":"neonatal HIV","type":"related"},{"name":"neonatal human immunodeficiency virus","type":"related"}],"termid":"MONDO:0022839","xrefs":{"Monarch":{"xref_id":"0022839"}}}


id: PBO:0084026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase; highly conserved enzyme that catalyzes the second step in the biosynthesis of GMP from inosine 5'-phosphate (IMP); transcription is not subject to regulation by guanine but is negatively regulated by nutrient starvation; reduction-of-function mutation gua1-G388D causes changes in cellular guanine nucleotide pools, defects in general protein synthesis, and impaired translation of GCN4 mRNA","termid":"PBO:0084026"}


id: FYPO:0003864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount a specific substance measured in a cell is lower than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of substance in cell during G0","synonyms":[{"name":"decreased accumulation of substance in cell during G0","type":"related"},{"name":"decreased level of substance in cell during cell quiescence","type":"exact"},{"name":"decreased level of substance in cell during quiescence","type":"exact"},{"name":"decreased substance level during G0","type":"exact"},{"name":"reduced level of substance in cell during G0","type":"exact"}],"termid":"FYPO:0003864"}


id: MONDO:0859292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay, behavioral abnormalities, and neuropsychiatric disorders","secondary_identifiers":["OMIM:620065","UMLS:C5774224","MEDGEN:1823997"],"termid":"MONDO:0859292","xrefs":{"Monarch":{"xref_id":"0859292"}}}


id: MONDO:0016164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Herpetiform pemphigus is a rare superficial pemphigus disease characterized by severe intractable pruritus with erythematous or urticarial plaques and vesicles organized in a herpetiform pattern. Mucosae are generally spared. Eosinophilia in peripheral blood and low titers of circulating autoantibodies are observed in many cases. Histologically, minimal or no apparent acantholysis is associated.","definition_xrefs":["Orphanet:208524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus","termid":"MONDO:0006594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"herpetiform pemphigus","secondary_identifiers":["UMLS:C4749730","GARD:20406","MEDGEN:1655315"],"termid":"MONDO:0016164","xrefs":{"Monarch":{"xref_id":"0016164"}}}


id: FYECO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The assay, or growth of cells, was conducted under strict anaerobic conditions.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic environment","synonyms":[{"name":"- O","type":"exact"},{"name":"- oxygen","type":"exact"},{"name":"-O","type":"exact"},{"name":"-oxygen","type":"exact"},{"name":"anaerobiosis","type":"exact"},{"name":"minus oxygen","type":"exact"}],"termid":"FYECO:0000134"}


id: MONDO:0008302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any central precocious puberty in which the cause of the disease is a mutation in the KISS1R gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central precocious puberty 1","secondary_identifiers":["DOID:0112310","MEDGEN:812209","UMLS:C3805879","OMIM:176400"],"synonyms":[{"name":"CPPB1","type":"related"},{"name":"KISS1R central precocious puberty","type":"exact"},{"name":"central precocious puberty caused by mutation in KISS1R","type":"exact"},{"name":"precocious puberty, central, 1","type":"exact"},{"name":"precocious puberty, central, type 1","type":"exact"}],"termid":"MONDO:0008302","xrefs":{"Monarch":{"xref_id":"0008302"}}}


id: GO:0003112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine from nerve endings increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by epinephrine","termid":"GO:0003065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by neuronal epinephrine","synonyms":[{"name":"positive regulation of heart rate by neuronal adrenaline","type":"exact"}],"termid":"GO:0003112"}


id: GO:0052352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont resulting in the formation of substances. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete biosynthesis by host of substance in symbiont (obsolete GO:0052352)","termid":"GO:0052352"}


id: GO:0090442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the degradation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose catabolic process","termid":"GO:0005993"},{"relation_name":"is_a","term_name":"trehalose metabolism in response to heat stress","termid":"GO:0070414"},{"relation_name":"part_of","term_name":"response to trehalose","termid":"GO:0010353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"trehalose catabolism in response to heat stress","synonyms":[{"name":"trehalose catabolic process in response to heat stress","type":"exact"}],"termid":"GO:0090442"}


id: MONDO:0009938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital pulmonary valve stenosis","termid":"MONDO:0017865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonic stenosis","secondary_identifiers":["MEDGEN:408291","HP:0001642","UMLS:C1956257","GARD:10071","OMIM:265500"],"synonyms":[{"name":"pulmonary stenosis","type":"exact"},{"name":"pulmonic stenosis","type":"exact"},{"name":"pulmonic stenosis (disease)","type":"exact"},{"name":"valvular pulmonic stenosis","type":"related"}],"termid":"MONDO:0009938","xrefs":{"Monarch":{"xref_id":"0009938"}}}


id: PR:O14145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tps2 gene.","definition_xrefs":["UniProtKB:O14145","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-phosphatase tps2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.09c","synonyms":[{"name":"SPAC3G6.09c","type":"related"},{"name":"Spom972h-tps2","type":"exact"},{"name":"TPP tps2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose synthase complex catalytic subunit tps2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate phosphatase tps2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14145"}


id: FYPO:0006180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers, occurs to a greater extent than normal.","definition_xrefs":["GO:0046785","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased microtubule polymerization","synonyms":[{"name":"increased microtubule growth","type":"exact"},{"name":"increased microtubule polymerisation","type":"exact"},{"name":"increased microtubule polymerization","type":"related"},{"name":"increased microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"increased microtubule polymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0006180"}


id: PBO:0090972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Srp1 family splicing factor","termid":"PBO:0090972"}


id: GO:0047835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tryptophan + acetyl-CoA = N-acetyl-D-tryptophan + CoA + H+.","definition_xrefs":["RHEA:10060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino-acid N-acetyltransferase activity","termid":"GO:0047812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"D-tryptophan N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02481","MetaCyc:D-TRYPTOPHAN-N-ACETYLTRANSFERASE-RXN","EC:2.3.1.34"],"synonyms":[{"name":"D-tryptophan acetyltransferase activity","type":"related"},{"name":"acetyl-CoA-D-tryptophan-alpha-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:D-tryptophan N-acetyltransferase activity","type":"related"}],"termid":"GO:0047835"}


id: PR:O13896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11239:SF2","OMA:SCHPO00468","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit RPC10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.05","secondary_identifiers":["UniProtKB:O13896"],"synonyms":[{"name":"DNA-directed RNA polymerases III 12.5 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3K","type":"exact"}],"termid":"PR:O13896"}


id: PBO:0057228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 383","termid":"PBO:0057228"}


id: PBO:0003902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor (predicted)","termid":"PBO:0003902"}


id: GO:0043515
data:
  {"annotated_genes":["SJAG_00684"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118684],"is_not":false,"summary":null,"term":"GO:0043515"}]},"cv_name":"molecular_function","definition":"Binding to a kinetochore, a proteinaceous structure on a condensed chromosome, beside the centromere, to which the spindle fibers are attached.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"kinetochore binding","references_by_uniquename":{"PMID:32109380":null},"termid":"GO:0043515","terms_by_termid":{"GO:0043515":null}}


id: PBO:0113420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding ribosome assembly factor; constituent of early pre-60S particles; genetically and physically linked to most NOP8 60s ribosome pre-assembly complex members and to ribosomal protein Rpl3p; contains two independent RNA-interacting domains; associates with helix H95 in 3' region of 25S rRNA, in close proximity to binding sites of Npa1p and Rpl3p; interacts with several snoRNAs","termid":"PBO:0113420"}


id: PBO:0080905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 5","termid":"PBO:0080905"}


id: PBO:0071131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 133","termid":"PBO:0071131"}


id: MONDO:0016259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant mixed epithelial and mesenchymal tumor that arises from the uterine corpus. It usually affects elderly postmenopausal women and presents with vaginal bleeding. It is characterized by the presence of a malignant epithelial component that is usually glandular and a sarcomatous component.","definition_xrefs":["NCIT:C9180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine body mixed cancer","termid":"MONDO:0002879"},{"relation_name":"is_a","term_name":"uterine carcinosarcoma","termid":"MONDO:0006485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinosarcoma of the corpus uteri","secondary_identifiers":["MEDGEN:316458","UMLS:C1704376","GARD:12335","Orphanet:213610"],"synonyms":[{"name":"body of uterus carcinosarcoma","type":"exact"},{"name":"carcinosarcoma of corpus uteri","type":"exact"},{"name":"carcinosarcoma of the corpus uteri","type":"exact"},{"name":"carcinosarcoma of the uterine body","type":"exact"},{"name":"carcinosarcoma of the uterine corpus","type":"exact"},{"name":"carcinosarcoma of the uterus","type":"narrow"},{"name":"carcinosarcoma of uterine body","type":"exact"},{"name":"carcinosarcoma of uterine corpus","type":"exact"},{"name":"carcinosarcoma of uterus","type":"exact"},{"name":"corpus uteri malignant mixed mesodermal tumor","type":"exact"},{"name":"corpus uteri malignant mixed mesodermal tumour","type":"exact"},{"name":"malignant mixed Mullerian tumor of the corpus uteri","type":"exact"},{"name":"malignant mixed Mullerian tumour of the corpus uteri","type":"exact"},{"name":"malignant mixed Müllerian tumor of the corpus uteri","type":"exact"},{"name":"malignant mixed Müllerian tumour of the corpus uteri","type":"exact"},{"name":"malignant mixed mesodermal neoplasm of the uterine body","type":"exact"},{"name":"malignant mixed mesodermal neoplasm of the uterine corpus","type":"exact"},{"name":"malignant mixed mesodermal neoplasm of the uterus","type":"exact"},{"name":"malignant mixed mesodermal neoplasm of uterine body","type":"exact"},{"name":"malignant mixed mesodermal neoplasm of uterine corpus","type":"exact"},{"name":"malignant mixed mesodermal neoplasm of uterus","type":"exact"},{"name":"malignant mixed mesodermal tumor of the uterine body","type":"exact"},{"name":"malignant mixed mesodermal tumor of the uterine corpus","type":"exact"},{"name":"malignant mixed mesodermal tumor of the uterus","type":"exact"},{"name":"malignant mixed mesodermal tumor of uterine body","type":"exact"},{"name":"malignant mixed mesodermal tumor of uterine corpus","type":"exact"},{"name":"malignant mixed mesodermal tumor of uterus","type":"exact"},{"name":"malignant mixed mesodermal tumour of the uterine body","type":"exact"},{"name":"malignant mixed mesodermal tumour of the uterine corpus","type":"exact"},{"name":"malignant mixed mesodermal tumour of the uterus","type":"exact"},{"name":"malignant mixed mesodermal tumour of uterine body","type":"exact"},{"name":"malignant mixed mesodermal tumour of uterine corpus","type":"exact"},{"name":"malignant mixed mesodermal tumour of uterus","type":"exact"},{"name":"malignant mixed müllerian tumor of corpus uteri","type":"related"},{"name":"malignant mixed müllerian tumour of corpus uteri","type":"related"},{"name":"mixed Mullerian cancer of corpus uteri","type":"exact"},{"name":"mixed Mullerian sarcoma of the uterus","type":"exact"},{"name":"mixed Mullerian sarcoma of uterus","type":"exact"},{"name":"mixed Müllerian cancer of corpus uteri","type":"exact"},{"name":"mixed Müllerian sarcoma of the uterus","type":"exact"},{"name":"mixed Müllerian sarcoma of uterus","type":"exact"},{"name":"uterine body carcinosarcoma","type":"exact"},{"name":"uterine body malignant mixed mesodermal neoplasm","type":"exact"},{"name":"uterine body malignant mixed mesodermal tumor","type":"exact"},{"name":"uterine body malignant mixed mesodermal tumour","type":"exact"},{"name":"uterine carcinosarcoma","type":"broad"},{"name":"uterine corpus carcinosarcoma","type":"exact"},{"name":"uterine corpus malignant mixed Mullerian neoplasm","type":"exact"},{"name":"uterine corpus malignant mixed Mullerian tumor","type":"exact"},{"name":"uterine corpus malignant mixed Mullerian tumour","type":"exact"},{"name":"uterine corpus malignant mixed Müllerian neoplasm","type":"exact"},{"name":"uterine corpus malignant mixed Müllerian tumor","type":"exact"},{"name":"uterine corpus malignant mixed Müllerian tumour","type":"exact"},{"name":"uterine corpus malignant mixed mesodermal (Mullerian) tumor","type":"exact"},{"name":"uterine corpus malignant mixed mesodermal (Mullerian) tumour","type":"exact"},{"name":"uterine corpus malignant mixed mesodermal (Müllerian) tumor","type":"exact"},{"name":"uterine corpus malignant mixed mesodermal (Müllerian) tumour","type":"exact"},{"name":"uterine corpus malignant mixed mesodermal neoplasm","type":"exact"},{"name":"uterine corpus malignant mixed mesodermal tumor","type":"exact"},{"name":"uterine corpus malignant mixed mesodermal tumour","type":"exact"},{"name":"uterine malignant mixed mesodermal neoplasm","type":"exact"},{"name":"uterine malignant mixed mesodermal tumor","type":"exact"},{"name":"uterine malignant mixed mesodermal tumour","type":"exact"},{"name":"uterine mixed Mullerian sarcoma","type":"exact"},{"name":"uterine mixed Müllerian sarcoma","type":"exact"}],"termid":"MONDO:0016259","xrefs":{"Monarch":{"xref_id":"0016259"}}}


id: PBO:0081969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRANB2 antisense RNA 1","termid":"PBO:0081969"}


id: GO:0086024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adrenergic receptor signaling pathway that contributes to an increase in frequency or rate of heart contraction. Binding of adrenalin or noradrenalin to a beta-adrenergic receptor on the surface of the signal-receiving cell results in the activation of an intracellular Gs protein. Gs activates adenylate cyclase to increase intracellular cyclic-AMP (cAMP) levels. cAMP binds directly to F-channels to allow an inward flow of sodium (known as funny current, or If current). The funny current is responsible for membrane depolarization and an increase in heart rate.","definition_xrefs":["PMID:21099118","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate cyclase-activating adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:0086024)","synonyms":[{"name":"Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"broad"},{"name":"adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"broad"},{"name":"beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:0086024"}


id: PBO:0066649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor 3","termid":"PBO:0066649"}


id: PBO:0053221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich glioma inactivated 1","termid":"PBO:0053221"}


id: PBO:0067086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 122, pseudogene","termid":"PBO:0067086"}


id: PBO:0056974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 27b","termid":"PBO:0056974"}


id: PBO:0026822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ubiquitin-specific_protease_activity","termid":"PBO:0026822"}


id: PBO:0004576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Man5GlcNac2-PP-Dol translocation protein Rft1 (predicted)","termid":"PBO:0004576"}


id: GO:0075502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Induction of endosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus through the endosomal pathway, and results in delivery of the virus contents into the host cell cytoplasm.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeabilization of host organelle membrane involved in viral entry into host cell","termid":"GO:0039665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome membrane permeabilization involved in viral entry into host cell","secondary_identifiers":["GO:0075518"],"synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by endosome membrane","type":"related"},{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by endosome membrane permeabilization","type":"related"}],"termid":"GO:0075502"}


id: GO:0016546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male fly licks the genitalia of a stationary female fly with his proboscis. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, proboscis-mediated licking","synonyms":[{"name":"male courtship behavior, licking","type":"related"},{"name":"male courtship behaviour, licking","type":"related"},{"name":"male courtship behaviour, proboscis-mediated licking","type":"exact"}],"termid":"GO:0016546"}


id: PBO:0029005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-telophase_nuclear_clustering","termid":"PBO:0029005"}


id: PBO:0059112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motile sperm domain containing 1","termid":"PBO:0059112"}


id: PR:000027596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PMID:11242054","PomBase:MAH","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3","termid":"PR:000027595"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3","type":"exact"}],"termid":"PR:000027596"}


id: PR:O14177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 2a that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01120","PANTHER:PTHR10476:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-III complex subunit did4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.01","secondary_identifiers":["UniProtKB:O14177"],"synonyms":[{"name":"Spom972h-CHMP2A","type":"exact"},{"name":"vacuolar protein-sorting-associated protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14177"}


id: PBO:0034192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_xenology_relationship_with","termid":"PBO:0034192"}


id: GO:0097648
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"}]},"cv_name":"cellular_component","definition":"A protein complex that contains G protein-coupled receptors.","definition_xrefs":["GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G protein-coupled receptor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-protein coupled receptor complex","type":"exact"}],"termid":"GO:0097648","terms_by_termid":{"GO:0038038":null}}


id: PBO:0059900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 23","termid":"PBO:0059900"}


id: PR:Q9HGL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sum2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGL3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sum2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.09","synonyms":[{"name":"Spom972h-sum2","type":"exact"}],"termid":"PR:Q9HGL3"}


id: MONDO:0010368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency without anhidrotic ectodermal dysplasia (obsolete MONDO:0010368)","termid":"MONDO:0010368","xrefs":{"Monarch":{"xref_id":"0010368"}}}


id: PBO:0112858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombephosphoproteomics_unige_ch_gene","termid":"PBO:0112858"}


id: MONDO:0060765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polypoid lesion composed of fibrous tissue and epithelium. Representative examples include skin tag, anal fibroepithelial polyp, and gingival fibroepithelial polyp.","definition_xrefs":["NCIT:C3337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroepithelial polyp","secondary_identifiers":["UMLS:C5848070","MEDGEN:1849971"],"synonyms":[{"name":"fibroepithelial polyp","type":"exact"},{"name":"fibropapilloma, benign","type":"exact"}],"termid":"MONDO:0060765","xrefs":{"Monarch":{"xref_id":"0060765"}}}


id: PBO:0050766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 28","termid":"PBO:0050766"}


id: PBO:0060703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5","termid":"PBO:0060703"}


id: FYPO:0007018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form 2'-O-methylguanosine is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25404562","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA methylation","termid":"FYPO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal tRNA guanosine 2'-O-methylation","synonyms":[{"name":"normal 2'-O-methylguanosine level in tRNA","type":"related"},{"name":"normal tRNA 2'-O-methylguanosine formation","type":"exact"},{"name":"normal tRNA Gm formation","type":"exact"},{"name":"normal tRNA guanosine 2'-O-methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA guanosine 2'-O-methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007018"}


id: PBO:0077012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS1 intronic transcript 1","termid":"PBO:0077012"}


id: GO:0003222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the trabecular cardiac ventricle muscle are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue morphogenesis","termid":"GO:0055010"},{"relation_name":"is_a","term_name":"heart trabecula morphogenesis","termid":"GO:0061384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular trabecula myocardium morphogenesis","synonyms":[{"name":"trabecula carnea morphogenesis","type":"related"}],"termid":"GO:0003222"}


id: PBO:0081798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 727","termid":"PBO:0081798"}


id: MONDO:0100126
data:
  {"annotated_genes":["SJAG_00660","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86760,86759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[84546,84547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[85527,85526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[86019,86020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"}]},"cv_name":"mondo","definition":"An inborn error of proline/orinthine metabolism that covers a wide spectrum of phenotypes and is caused by pathogenic variants in the aldehyde dehydrogenase 18 family member A1 (ALDH18A1) gene. These variants lead to a variety of neurocutaneous and motor syndromes characterized by cutis laxa, connective tissue weakness, facial dysmorphism, growth restriction, developmental delay, cataracts, hypotonia, hypertonia, and amyotrophy.","definition_xrefs":["PMID:32017139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of proline metabolism","termid":"MONDO:0017355"},{"relation_name":"is_a","term_name":"inborn disorder of ornithine metabolism","termid":"MONDO:0017356"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"P5CS deficiency","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"P5CS deficiency","type":"exact"},{"name":"delta1-pyrroline-5-carboxylate synthetase deficiency","type":"exact"}],"termid":"MONDO:0100126","terms_by_termid":{"MONDO:0009053":null,"MONDO:0011006":null,"MONDO:0014702":null,"MONDO:0014706":null},"xrefs":{"Monarch":{"xref_id":"0100126"}}}


id: PBO:0040818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICRA like chromatin remodeling complex associated protein","termid":"PBO:0040818"}


id: GO:0060472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cortical granule exocytosis by directing movement of calcium ions (Ca2+) into the cytosol.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion-dependent exocytosis","termid":"GO:0045956"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"is_a","term_name":"positive regulation of cytosolic calcium ion concentration involved in egg activation","termid":"GO:0060470"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"cortical granule exocytosis","termid":"GO:0060471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of cortical granule exocytosis by positive regulation of cytosolic calcium ion concentration","synonyms":[{"name":"positive regulation of cortical granule exocytosis by elevation of cytosolic calcium ion concentration","type":"exact"}],"termid":"GO:0060472"}


id: MONDO:0010935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuronopathy, distal hereditary motor, type 5A (obsolete MONDO:0010935)","termid":"MONDO:0010935","xrefs":{"Monarch":{"xref_id":"0010935"}}}


id: PBO:0058932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12 kinetochore complex component","termid":"PBO:0058932"}


id: FYPO:0001852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal when the cell is subject to iron ion starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level during cellular response to iron ion starvation","termid":"FYPO:0002042"},{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription during iron starvation","synonyms":[{"name":"decreased transcription during iron depletion","type":"exact"},{"name":"decreased transcription during iron deprivation","type":"exact"},{"name":"decreased transcription during iron ion starvation","type":"exact"},{"name":"decreased transcription during iron starvation during mitotic cell cycle","type":"related"},{"name":"decreased transcription during iron starvation during vegetative growth","type":"exact"},{"name":"reduced transcription during iron starvation","type":"exact"}],"termid":"FYPO:0001852"}


id: FYPO:0000386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which biofilm formation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biofilm formation","termid":"FYPO:0000630"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished biofilm formation","synonyms":[{"name":"absent biofilm formation","type":"exact"},{"name":"biofilm formation abolished","type":"exact"},{"name":"biofilm formation: absent","type":"related"}],"termid":"FYPO:0000386"}


id: PBO:0088447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Cki1","termid":"PBO:0088447"}


id: PATO:0001929
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits shape variation or change.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of shape","termid":"PATO:0001929"}


id: PBO:0091737
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sre1 and Scp1 form a functional 4:4 oligomer","termid":"PBO:0091737"}


id: PBO:0070255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 200 pseudogene","termid":"PBO:0070255"}


id: MONDO:0015978
data:
  {"annotated_genes":["SJAG_01960","SJAG_00739"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009953"},{"annotations":[86242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00739":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"functional neutrophil defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:808756909","SCTID:105600002","UMLS:C5681846","Orphanet:183681","MEDGEN:1842428","GARD:20321"],"synonyms":[{"name":"neutrophil disease","type":"exact"},{"name":"neutrophilopathy","type":"exact"}],"termid":"MONDO:0015978","terms_by_termid":{"MONDO:0009953":null,"MONDO:0044208":null},"xrefs":{"Monarch":{"xref_id":"0015978"}}}


id: GO:0050513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + UDP-alpha-D-xylose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-[beta-D-xylosyl-(1->2)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + H+ + UDP.","definition_xrefs":["EC:2.4.2.38","RHEA:10612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glycoprotein 2-beta-D-xylosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06016","MetaCyc:2.4.2.38-RXN"],"synonyms":[{"name":"1,2-beta-xylosyltransferase activity","type":"related"},{"name":"beta-1,2-xylosyltransferase activity","type":"related"},{"name":"glycoprotein 2-b-D-xylosyltransferase activity","type":"exact"}],"termid":"GO:0050513"}


id: PBO:0017072
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein","termid":"PBO:0017072"}


id: MONDO:0010491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"partial duplication of the short arm of chromosome X","termid":"MONDO:0017009"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome X","termid":"MONDO:0017010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked acrogigantism due to Xq26 microduplication","secondary_identifiers":["OMIM:300942","UMLS:C3891556","GARD:18433","MEDGEN:856021","Orphanet:448372","SCTID:768472004"],"synonyms":[{"name":"X-LAG (X-linked acrogigantism) due to dup(X)q(26)","type":"exact"},{"name":"X-linked acrogigantism","type":"related"},{"name":"chromosome Xq26 microduplication syndrome","type":"related"},{"name":"chromosome Xq26.3 DUPLICATION syndrome","type":"related"},{"name":"chromosome xq26.3 duplication syndrome, X-linked dominant","type":"exact"},{"name":"familial infantile gigantism due to Xq26 microduplication","type":"exact"},{"name":"familial infantile gigantism due to dup(X)q(26)","type":"exact"}],"termid":"MONDO:0010491","xrefs":{"Monarch":{"xref_id":"0010491"}}}


id: PBO:0088344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor (GTPase) Mtg2","termid":"PBO:0088344"}


id: PBO:0053540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 544","termid":"PBO:0053540"}


id: MONDO:0009864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate carboxykinase deficiency","termid":"MONDO:0017320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase deficiency, mitochondrial","secondary_identifiers":["OMIM:261650","UMLS:C1849821","GARD:4279","MEDGEN:376665","Orphanet:79317","MESH:C564890"],"synonyms":[{"name":"PCK2 deficiency","type":"related"},{"name":"PCKDM","type":"related"},{"name":"PEPCK 2 deficiency","type":"related"},{"name":"PEPCK deficiency, mitochondrial","type":"exact"},{"name":"PEPCK2","type":"related"},{"name":"PEPCK2 deficiency","type":"related"},{"name":"phosphoenolpyruvate carboxykinase 2 deficiency","type":"related"},{"name":"phosphoenolpyruvate carboxykinase deficiency, mitochondrial","type":"exact"}],"termid":"MONDO:0009864","xrefs":{"Monarch":{"xref_id":"0009864"}}}


id: PBO:0068655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 36, pseudogene","termid":"PBO:0068655"}


id: MONDO:0006389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm with skeletal muscle differentiation affecting the prostate.","definition_xrefs":["NCIT:C5522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate sarcoma","termid":"MONDO:0002854"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate rhabdomyosarcoma","secondary_identifiers":["MEDGEN:233356","UMLS:C1335518","DOID:3252","EFO:1000498"],"synonyms":[{"name":"prostate gland rhabdomyosarcoma","type":"exact"},{"name":"prostate gland rhabdomyosarcoma (disease)","type":"exact"},{"name":"prostate rhabdomyosarcoma","type":"exact"},{"name":"rhabdomyosarcoma (disease) of prostate gland","type":"exact"},{"name":"rhabdomyosarcoma of prostate","type":"exact"},{"name":"rhabdomyosarcoma of the prostate","type":"exact"}],"termid":"MONDO:0006389","xrefs":{"Monarch":{"xref_id":"0006389"}}}


id: PBO:0040272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonal bHLH transcription factor 1","termid":"PBO:0040272"}


id: FYPO:0001753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow normally (i.e. indistinguishably from wild type) under anaerobic conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal anaerobic cell population growth","synonyms":[{"name":"normal anaerobic growth","type":"broad"}],"termid":"FYPO:0001753"}


id: MONDO:0017906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis cutis dyschromia is a rare primary cutaneous amyloidosis characterized by macular or reticulate hyperpigmentation with symmetrically distributed guttate hypo- and hyperpigmented lesions which progress gradually over the years to involve almost the entire body (with relative sparing of the face, hands, feet and neck). Patients are usually asymptomatic, however mild pruritus may be associated. Amyloid deposition in the papillary dermis is observed on skin biopsy. Systemic amyloidosis is not present and association with generalized morphea, atypical Parkinsonism, spasticity, motor weakness or colon carcinoma is rare.","definition_xrefs":["Orphanet:319635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous amyloidosis","termid":"MONDO:0015301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179","MONDO:0005093"],"is_obsolete":false,"name":"amyloidosis cutis dyschromia","secondary_identifiers":["DOID:0080932","ICD10EXP:L99.0*","GARD:17466","MEDGEN:1641859","ICD10EXP:E85.4+","UMLS:C4554601"],"synonyms":[{"name":"amyloidosis cutis dyschromica","type":"exact"}],"termid":"MONDO:0017906","xrefs":{"Monarch":{"xref_id":"0017906"}}}


id: PBO:0038380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_chemical_role","termid":"PBO:0038380"}


id: PR:Q8TFH8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisome assembly protein 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12888:SF0","OMA:SCHPO00511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome assembly protein 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.03","secondary_identifiers":["UniProtKB:Q8TFH8"],"synonyms":[{"name":"Spom972h-PEX12","type":"exact"},{"name":"peroxin-12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH8"}


id: GO:0072757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a camptothecin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to camptothecin","termid":"GO:1901563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to camptothecin","synonyms":[{"name":"cellular response to CPT","type":"exact"}],"termid":"GO:0072757"}


id: MOD:00014
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-cysteine.","definition_xrefs":["PubMed:1310545","ChEBI:29950","DeltaMass:0","PubMed:3447159","PubMed:15790858","PubMed:6692818","PubMed:7338899","RESID:AA0005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine residue","synonyms":[{"name":"(2R)-2-amino-3-sulfanylpropanoic acid","type":"exact"},{"name":"(R)-cysteine","type":"exact"},{"name":"2-amino-3-mercaptopropanoic acid","type":"exact"},{"name":"2-amino-3-mercaptopropionic acid","type":"exact"},{"name":"2-azanyl-3-sulfanylpropanoic acid","type":"exact"},{"name":"3-mercapto-L-alanine","type":"exact"},{"name":"Cys","type":"exact"},{"name":"Cysteine (C, Cys)","type":"exact"},{"name":"L-(+)-cysteine","type":"exact"},{"name":"L-cysteine","type":"exact"},{"name":"alpha-amino-beta-mercaptopropanoic acid","type":"exact"},{"name":"alpha-amino-beta-mercaptopropionic acid","type":"exact"},{"name":"alpha-amino-beta-thiolpropionic acid","type":"exact"},{"name":"beta-mercaptoalanine","type":"exact"},{"name":"half-cystine","type":"exact"},{"name":"thioserine","type":"exact"}],"termid":"MOD:00014"}


id: PBO:0005224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separase/separin","termid":"PBO:0005224"}


id: PBO:0044245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut like homeobox 2","termid":"PBO:0044245"}


id: PBO:0080949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBED3 antisense RNA 1","termid":"PBO:0080949"}


id: GO:0033828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + ADP-glucose = 2-O-(beta-D-glucosyl)-sn-glycerol 3-phosphate + ADP + H+.","definition_xrefs":["EC:2.4.1.213","RHEA:12881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"glucosylglycerol-phosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R05328","MetaCyc:2.4.1.213-RXN"],"synonyms":[{"name":"ADP-glucose:sn-glycerol-3-phosphate 2-beta-D-glucosyltransferase activity","type":"related"},{"name":"ADPglucose:sn-glycerol-3-phosphate 2-beta-D-glucosyltransferase activity","type":"related"},{"name":"GG-phosphate synthase activity","type":"related"},{"name":"GGPS","type":"related"},{"name":"glucosyl-glycerol-phosphate synthase activity","type":"related"}],"termid":"GO:0033828"}


id: PBO:0000225
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porphyria","termid":"PBO:0000225"}


id: GO:0009594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a nutrient stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient","termid":"GO:0007584"},{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of nutrient","synonyms":[{"name":"detection of nutrients","type":"exact"},{"name":"nutrient sensing","type":"related"},{"name":"perception of nutrients","type":"related"}],"termid":"GO:0009594"}


id: PR:Q9P6R6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit delta, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03536","PANTHER:PTHR13822:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit delta, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.04","secondary_identifiers":["UniProtKB:Q9P6R6"],"synonyms":[{"name":"F-ATPase delta subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP5D","type":"exact"}],"termid":"PR:Q9P6R6"}


id: GO:0000488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of LSU-rRNA","termid":"GO:0000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0000488"}


id: MONDO:0019795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acalvaria is a rare malformation defined as missing scalp and flat bones over an area of the cranial vault. The size of the affected area is variable. In rare cases, acalvaria involves the whole of the dome-like superior portion of the cranium comprising the frontal, parietal, and occipital bones. Dura mater and associated muscles are absent in the affected area but the central nervous system is usually unaffected, although some neuropathological abnormality is often present (e.g. holoprosencephaly or gyration anomalies). Skull base and facial bones are normal.","definition_xrefs":["Orphanet:945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acalvaria","secondary_identifiers":["GARD:361","MEDGEN:418951","icd11.foundation:1719021696","MESH:C535570","MESH:D009436","SCTID:203923004","UMLS:C2930936"],"synonyms":[{"name":"Acrania","type":"exact"},{"name":"primary acalvaria","type":"related"}],"termid":"MONDO:0019795","xrefs":{"Monarch":{"xref_id":"0019795"}}}


id: FYPO:0002570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dATP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular dNTP level","termid":"FYPO:0005752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular dATP level","synonyms":[{"name":"increased cellular dATP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dATP level during vegetative growth","type":"exact"},{"name":"increased dATP accumulation","type":"related"}],"termid":"FYPO:0002570"}


id: GO:1904221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of serine C-palmitoyltransferase activity.","definition_xrefs":["GOC:rl","GO_REF:0000059","GOC:BHF","GOC:TermGenie","PMID:16120614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of serine C-palmitoyltransferase activity","termid":"GO:1904220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of serine C-palmitoyltransferase activity","synonyms":[{"name":"down regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"down regulation of SPT","type":"related"},{"name":"down regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"down regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"down regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"down-regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"down-regulation of SPT","type":"related"},{"name":"down-regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"down-regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"down-regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"downregulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"downregulation of SPT","type":"related"},{"name":"downregulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"downregulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"downregulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"inhibition of 3-oxosphinganine synthetase activity","type":"narrow"},{"name":"inhibition of SPT","type":"related"},{"name":"inhibition of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"inhibition of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"narrow"},{"name":"inhibition of serine C-palmitoyltransferase activity","type":"narrow"},{"name":"negative regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"negative regulation of SPT","type":"related"},{"name":"negative regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"negative regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"}],"termid":"GO:1904221"}


id: PBO:0091499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor Fub1","termid":"PBO:0091499"}


id: PBO:0066483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 1","termid":"PBO:0066483"}


id: GO:0051032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nucleic acids from one side of a membrane to the other. Nucleic acids are single or double-stranded polynucleotides involved in the storage, transmission and transfer of genetic information.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nucleic acid transmembrane transporter activity","termid":"GO:0051032"}


id: GO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the intramembrane proteolysis of a signal peptide, following its removal from a preprotein.","definition_xrefs":["PMID:12077416"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptide peptidase activity (obsolete GO:0042499)","synonyms":[{"name":"SPP","type":"exact"},{"name":"signal peptide peptidase activity","type":"exact"}],"termid":"GO:0042499"}


id: PBO:0000808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT family","termid":"PBO:0000808"}


id: GO:1901497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diphenyl ether stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diphenyl ether","termid":"GO:1901497"}


id: MONDO:0019377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycoplasma encephalitis is a rare infectious encephalitis characterized by an acute onset of neurological signs and symptoms (e.g. altered consciousness, seizures, headaches, meningeal signs, behavioral changes) due to bacterial infection by Mycoplasma pneumoniae. Patients typically present unspecific signs and symptoms, such as fever, nausea, vomiting, fatigue, prior to onset of neurological manifestations and frequently have a history of a respiratory tract infection (e.g. pneumonia, bronchiolitis, pharyngitis).","definition_xrefs":["Orphanet:83482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"},{"relation_name":"is_a","term_name":"Mycoplasmoides infection","termid":"MONDO:1030003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycoplasma encephalitis","secondary_identifiers":["UMLS:C4707240","GARD:19040","MEDGEN:1636101"],"synonyms":[{"name":"Mycoplasma pneumoniae caused infectious encephalitis","type":"exact"},{"name":"Mycoplasma pneumoniae infectious encephalitis","type":"exact"}],"termid":"MONDO:0019377","xrefs":{"Monarch":{"xref_id":"0019377"}}}


id: PBO:0072808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMD4A antisense RNA 1","termid":"PBO:0072808"}


id: PBO:0061262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 pseudogene 1","termid":"PBO:0061262"}


id: GO:0016878
data:
  {"annotated_genes":["SJAG_03471","SJAG_02741","SJAG_00947","SJAG_01524","SJAG_03813","SJAG_03909"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003987"},{"annotations":[115209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031956"},{"annotations":[105067,112865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[105068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[115210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050203"},{"annotations":[105069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"},{"annotations":[114417,89428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of an acid and a thiol via a carbon-sulfur bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.2.1.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-sulfur bonds","termid":"GO:0016877"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00947":null,"SJAG_01524":null,"SJAG_02741":null,"SJAG_03471":null,"SJAG_03813":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"acid-thiol ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016878","terms_by_termid":{"GO:0003987":null,"GO:0004775":null,"GO:0031956":null,"GO:0050203":null,"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: PBO:0110067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER or Golgi multispanning membrane VanZ-like family protein","termid":"PBO:0110067"}


id: PBO:0027588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-linear_elements_absent_from_cell","termid":"PBO:0027588"}


id: PBO:0077873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase","termid":"PBO:0077873"}


id: GO:0090292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nuclear matrix, the dense fibrillar network lying on the inner side of the nuclear membrane, is directly or indirectly linked to the nuclear membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear matrix organization","termid":"GO:0043578"},{"relation_name":"is_a","term_name":"maintenance of protein location in nucleus","termid":"GO:0051457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear matrix anchoring at nuclear membrane","synonyms":[{"name":"nucleoskeleton anchoring at nuclear membrane","type":"exact"}],"termid":"GO:0090292"}


id: PBO:0064744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 80","termid":"PBO:0064744"}


id: PBO:0000724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Orb6","termid":"PBO:0000724"}


id: GO:0002835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"regulation of response to tumor cell","termid":"GO:0002834"},{"relation_name":"negatively_regulates","term_name":"response to tumor cell","termid":"GO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to tumor cell","synonyms":[{"name":"down regulation of response to tumor cell","type":"exact"},{"name":"down-regulation of response to tumor cell","type":"exact"},{"name":"downregulation of response to tumor cell","type":"exact"},{"name":"inhibition of response to tumor cell","type":"narrow"},{"name":"negative regulation of response to tumour cell","type":"exact"}],"termid":"GO:0002835"}


id: GO:0021713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior olivary nucleus over time, from its formation to the mature structure. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus development","synonyms":[{"name":"inferior olive development","type":"related"}],"termid":"GO:0021713"}


id: PBO:0110476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERRY endosomal RAB5 effector complex subunit 3","termid":"PBO:0110476"}


id: MONDO:0020664
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm characterized by the presence of neoplastic spindle cells.","definition_xrefs":["NCIT:C27263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"is_obsolete":false,"name":"spindle cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:234806","UMLS:C1336052","EFO:0000705"],"synonyms":[{"name":"spindle cell neoplasm","type":"exact"},{"name":"spindle cell tumor","type":"exact"},{"name":"spindle cell tumour","type":"exact"}],"termid":"MONDO:0020664","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0020664"}}}


id: PR:Q9P782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An activator of 90 kDa heat shock protein ATPase homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13009:SF0","OMA:SCHPO03151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1711.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.08","secondary_identifiers":["UniProtKB:Q9P782"],"synonyms":[{"name":"Spom972h-AHSA1","type":"exact"}],"termid":"PR:Q9P782"}


id: GO:0019226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurological system process in which a signal is transmitted through the nervous system by a combination of action potential propagation and synaptic transmission.","definition_xrefs":["ISBN:0815316194","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"part_of","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transmission of nerve impulse","synonyms":[{"name":"conduction of nerve impulse","type":"exact"},{"name":"signal transmission along a neuron","type":"exact"}],"termid":"GO:0019226"}


id: PBO:0003868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex anchor subunit Tim18","termid":"PBO:0003868"}


id: SO:0000471
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_regulated","termid":"SO:0000123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoregulated","termid":"SO:0000471"}


id: PBO:0090604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw1","termid":"PBO:0090604"}


id: PBO:0081677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 598, E3 ubiquitin ligase","termid":"PBO:0081677"}


id: MONDO:0024685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukemia","termid":"MONDO:0004643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"Philadelphia-positive myelogenous leukemia","secondary_identifiers":["NCIT:C3177","UMLS:C0023476","MEDGEN:9731"],"synonyms":[{"name":"Ph1-positive granulocytic leukaemia","type":"exact"},{"name":"Ph1-positive granulocytic leukemia","type":"exact"},{"name":"Ph1-positive myelocytic leukaemia","type":"exact"},{"name":"Ph1-positive myelocytic leukemia","type":"exact"},{"name":"Ph1-positive myelogenous leukaemia","type":"exact"},{"name":"Ph1-positive myelogenous leukemia","type":"exact"},{"name":"Ph1-positive myeloid leukaemia","type":"exact"},{"name":"Ph1-positive myeloid leukemia","type":"exact"},{"name":"Philadelphia-positive granulocytic leukaemia","type":"exact"},{"name":"Philadelphia-positive granulocytic leukemia","type":"exact"},{"name":"Philadelphia-positive myelocytic leukaemia","type":"exact"},{"name":"Philadelphia-positive myelocytic leukemia","type":"exact"},{"name":"Philadelphia-positive myelogenous leukemia","type":"exact"},{"name":"Philadelphia-positive myeloid leukaemia","type":"exact"},{"name":"Philadelphia-positive myeloid leukemia","type":"exact"}],"termid":"MONDO:0024685","xrefs":{"Monarch":{"xref_id":"0024685"}}}


id: GO:0060992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fungicide stimulus. Fungicides are chemicals used to kill fungi.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"},{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fungicide","termid":"GO:0060992"}


id: MONDO:0013949
data:
  {"annotated_genes":["SJAG_02693"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86765],"is_not":false,"summary":null,"term":"MONDO:0013949"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX13 defect","termid":"MONDO:0100267"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066","MONDO:0005244","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 11A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614883","UMLS:C3554000","DOID:0080485","MEDGEN:766914","GARD:15874"],"synonyms":[{"name":"PBD11A","type":"related"},{"name":"peroxisome biogenesis disorder 11A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 13","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group H","type":"related"}],"termid":"MONDO:0013949","terms_by_termid":{"MONDO:0013949":null},"xrefs":{"Monarch":{"xref_id":"0013949"}}}


id: FYPO:0004838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the localization of a protein to the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to plasma membrane","synonyms":[{"name":"abnormal protein localisation to plasma membrane","type":"exact"},{"name":"abnormal protein localization in plasma membrane","type":"exact"},{"name":"abnormal protein localization to cell membrane","type":"exact"}],"termid":"FYPO:0004838"}


id: MONDO:0010153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trichoodontoonychial dysplasia is a rare ectodermal dysplasia syndrome characterized by severe generalized hypotrichosis, parietal alopecia, secondary anodontia resulting from enamel hypoplasia, onychodystrophy, bone deficiency in the frontoparietal region and skin manifestations (incl. nevus pigmentosus, papules, ephelides, palmoplantar keratosis, supernumerary nipples, abnormal dermatoglyphics). There have been no further descriptions in the literature since 1983.","definition_xrefs":["Orphanet:3355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichoodontoonychial dysplasia","secondary_identifiers":["OMIM:275450","UMLS:C3279457","SCTID:766813000","MEDGEN:481087","GARD:5267","MESH:C564760"],"synonyms":[{"name":"trichoodontoonychial dysplasia with bone deficiency","type":"related"},{"name":"trichoodontoonychial dysplasia with bone deficiency in frontoparietal region","type":"exact"}],"termid":"MONDO:0010153","xrefs":{"Monarch":{"xref_id":"0010153"}}}


id: PBO:0090698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3","termid":"PBO:0090698"}


id: PBO:0058273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-2","termid":"PBO:0058273"}


id: PBO:0075761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 1 pseudogene 3","termid":"PBO:0075761"}


id: GO:0045156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of electrons within the cyclic electron transport pathway of photosynthesis.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity","synonyms":[{"name":"cytochrome","type":"related"},{"name":"cytochrome bc1 complex","type":"narrow"}],"termid":"GO:0045156"}


id: PBO:0017874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc1","termid":"PBO:0017874"}


id: FYPO:0001420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow at the same rate as wild type in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"},{"relation_name":"is_a","term_name":"normal cell population growth rate","termid":"FYPO:0001419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal vegetative cell population growth rate","synonyms":[{"name":"normal growth rate","type":"broad"},{"name":"normal vegetative cell population proliferation","type":"related"},{"name":"normal vegetative cell proliferation","type":"related"}],"termid":"FYPO:0001420"}


id: GO:0072524
data:
  {"annotated_genes":["SJAG_00283","SJAG_02785","SJAG_01539","SJAG_00522","SJAG_02618","SJAG_00685","SJAG_00501","SJAG_05314","SJAG_06622","SJAG_04192","SJAG_00957","SJAG_00691","SJAG_00839","SJAG_02009","SJAG_03096","SJAG_04263","SJAG_02796","SJAG_03828","SJAG_04467","SJAG_01500","SJAG_00252","SJAG_02154","SJAG_03852","SJAG_04495","SJAG_02135","SJAG_00633","SJAG_01359","SJAG_06621","SJAG_04048","SJAG_03934","SJAG_02945","SJAG_01383","SJAG_02191","SJAG_02853","SJAG_00070","SJAG_02369","SJAG_01582","SJAG_03946","SJAG_04152","SJAG_01824","SJAG_02297","SJAG_01543","SJAG_01881","SJAG_01310","SJAG_00605","SJAG_02889","SJAG_02462","SJAG_04693","SJAG_02696","SJAG_01566","SJAG_03903","SJAG_00707","SJAG_03298","SJAG_04334","SJAG_00461","SJAG_00409","SJAG_00027","SJAG_05230","SJAG_01425","SJAG_03091","SJAG_03660","SJAG_04362","SJAG_03373","SJAG_02148","SJAG_01012","SJAG_03786","SJAG_03669","SJAG_02107"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[103126,94030,103949,115796,102870,104925,108384,108385,108388,108389,97772,105294,105295,108386,97494,104926,108390,108849,108850,108853,108851,108854,94517,108387,108852,108848,104924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[103951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[88123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[97690,111027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[96062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043490"},{"annotations":[112533,90165,90584,98842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[116742,99557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[104583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[91426,96974,95957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019674"},{"annotations":[88533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[104584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[96220,93483,105970,112301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"},{"annotations":[95958,91427,96975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[104585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[94610,99277,101587,101588,100357,94611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006740"},{"annotations":[72605,75583],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[100106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006769"},{"annotations":[88820,102921,117058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046496"},{"annotations":[107963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[112534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[88534,90166,109078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[107964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[113253,95865,107889,88454],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[94035,111028,97691,114777,96395,117882,96484],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0009051"},{"annotations":[89204],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[99188,115140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[113833,100362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[87239,94997,63777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[111277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[87240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[94998,87241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[92326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[88726],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[75582],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"},{"annotations":[100363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"},{"annotations":[98524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042816"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyridine-containing compound, i.e. any compound that contains pyridine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic 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id: PBO:0074352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 1B","termid":"PBO:0074352"}


id: PBO:0073099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 3","termid":"PBO:0073099"}


id: PBO:0065188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROX1 antisense RNA 1","termid":"PBO:0065188"}


id: GO:0050996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"positively_regulates","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid catabolic process","synonyms":[{"name":"activation of lipid catabolic process","type":"narrow"},{"name":"positive regulation of lipid breakdown","type":"exact"},{"name":"positive regulation of lipid catabolism","type":"exact"},{"name":"positive regulation of lipid degradation","type":"exact"},{"name":"stimulation of lipid catabolic process","type":"narrow"},{"name":"up regulation of lipid catabolic process","type":"exact"},{"name":"up-regulation of lipid catabolic process","type":"exact"},{"name":"upregulation of lipid catabolic process","type":"exact"}],"termid":"GO:0050996"}


id: GO:1901913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of capsule organization","synonyms":[{"name":"regulation of capsule organisation","type":"exact"},{"name":"regulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901913"}


id: GO:0060730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of intestinal epithelial structure maintenance, a tissue homeostatic process required for the maintenance of the structure of the intestinal epithelium.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"intestinal epithelial structure maintenance","termid":"GO:0060729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal epithelial structure maintenance","termid":"GO:0060730"}


id: MONDO:0015637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign partial infantile seizures","termid":"MONDO:0015642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign non-familial infantile seizures","secondary_identifiers":["MEDGEN:1843116","GARD:20071","Orphanet:166295","UMLS:C5680425"],"termid":"MONDO:0015637","xrefs":{"Monarch":{"xref_id":"0015637"}}}


id: PBO:0075144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C","termid":"PBO:0075144"}


id: SO:0001838
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion the sequence of which cannot be mapped to the reference genome.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"novel_sequence_insertion","synonyms":[{"name":"novel sequence insertion","type":"exact"}],"termid":"SO:0001838"}


id: PBO:0084312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Isopentenyl diphosphate:dimethylallyl diphosphate isomerase; catalyzes an essential activation step in the isoprenoid biosynthetic pathway; required for viability; isopentenyl diphosphate:dimethylallyl diphosphate isomerase is also known as IPP isomerase","termid":"PBO:0084312"}


id: PBO:0004504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp105","termid":"PBO:0004504"}


id: SO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified DNA adenine base,at the 8 carbon, often the product of DNA damage.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenine","termid":"SO:0001962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8_oxoadenine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"8-oxoA","type":"exact"},{"name":"8-oxoadenine","type":"exact"}],"termid":"SO:0001967"}


id: MONDO:1012466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"perinatal weak calf syndrome, non-human animal","termid":"MONDO:1011786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perinatal weak calf syndrome, cattle","secondary_identifiers":["OMIA:001817-9913"],"termid":"MONDO:1012466","xrefs":{"Monarch":{"xref_id":"1012466"}}}


id: PBO:0066384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REC8 meiotic recombination protein","termid":"PBO:0066384"}


id: GO:1901551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell development.","definition_xrefs":["PMID:19470579","GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of endothelial cell differentiation","termid":"GO:0045602"},{"relation_name":"is_a","term_name":"regulation of endothelial cell development","termid":"GO:1901550"},{"relation_name":"negatively_regulates","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell development","synonyms":[{"name":"down regulation of endothelial cell development","type":"exact"},{"name":"down-regulation of endothelial cell development","type":"exact"},{"name":"downregulation of endothelial cell development","type":"exact"},{"name":"inhibition of endothelial cell development","type":"narrow"}],"termid":"GO:1901551"}


id: PBO:0067826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 128","termid":"PBO:0067826"}


id: MONDO:0000414
data:
  {"annotated_genes":["SJAG_01653","SJAG_04038","SJAG_02848","SJAG_02384"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85482,85481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014150"},{"annotations":[84796,84795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014598"}]},"cv_name":"mondo","definition":"A electroclinical syndrome that occurs during childhood.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electroclinical syndrome","termid":"MONDO:0000411"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01653":null,"SJAG_02384":null,"SJAG_02848":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"childhood electroclinical syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050704"],"synonyms":[{"name":"electroclinical syndrome of childhood","type":"exact"},{"name":"paediatric electroclinical syndrome","type":"exact"},{"name":"pediatric electroclinical syndrome","type":"exact"}],"termid":"MONDO:0000414","terms_by_termid":{"MONDO:0014150":null,"MONDO:0014598":null},"xrefs":{"Monarch":{"xref_id":"0000414"}}}


id: PR:G2TRN5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRN5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C25B8.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.20","synonyms":[{"name":"Spom972h-SPAC25B8.20","type":"exact"}],"termid":"PR:G2TRN5"}


id: GO:0098538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the transport vesicle membrane that faces the lumen.","definition_xrefs":["GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"transport vesicle membrane","termid":"GO:0030658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"lumenal side of transport vesicle membrane","synonyms":[{"name":"internal side of transport vesicle membrane","type":"exact"}],"termid":"GO:0098538"}


id: GO:0051601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an exocyst is transported to, or maintained in, a specific location. An exocyst is a protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"exocyst localization","synonyms":[{"name":"establishment and maintenance of exocyst localization","type":"exact"},{"name":"exocyst localisation","type":"exact"}],"termid":"GO:0051601"}


id: PBO:0003517
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Missegregation and Lethal when Overexpressed","termid":"PBO:0003517"}


id: PBO:0017793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone Ecm29","termid":"PBO:0017793"}


id: PBO:0045763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA hydratase domain containing 3","termid":"PBO:0045763"}


id: FYPO:0000358
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id: PBO:0054882
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id: PBO:0087810
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id: MONDO:0007759
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id: PBO:0073439
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id: GO:0040029
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id: PR:Q09811
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id: GO:0048481
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id: MONDO:0030473
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id: MONDO:0032858
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id: MONDO:0010790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare mitochondrial oxidative phosphorylation disorder characterized by myoclonic seizures, ataxia, generalized epilepsy, muscle weakness and ragged red fibers in the muscle biopsy.","definition_xrefs":["Orphanet:551"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early myoclonic encephalopathy","termid":"MONDO:0016022"},{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"mitochondrial encephalomyopathy","termid":"MONDO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"MERRF syndrome","secondary_identifiers":["DOID:310","ICD10CM:E88.42","NORD:1441","SCTID:68448003","UMLS:C0162672","NANDO:1200177","OMIM:545000","ICD9:277.87","GARD:7144","MedDRA:10069825","MESH:D017243","NANDO:2200526","NCIT:C84889","MEDGEN:56486"],"synonyms":[{"name":"Fukuhara syndrome","type":"exact"},{"name":"MERRF","type":"exact"},{"name":"MERRF syndrome","type":"exact"},{"name":"myoclonic epilepsy - ragged red fibers","type":"exact"},{"name":"myoclonic epilepsy - ragged red fibres","type":"exact"},{"name":"myoclonic epilepsy associated with ragged red fibers","type":"related"},{"name":"myoclonic epilepsy associated with ragged red fibres","type":"related"},{"name":"myoclonic epilepsy associated with ragged-RED fibers","type":"related"},{"name":"myoclonic epilepsy associated with ragged-RED fibres","type":"related"},{"name":"myoclonic epilepsy with ragged red fibers","type":"related"},{"name":"myoclonic epilepsy with ragged red fibres","type":"related"},{"name":"myoclonus epilepsy and ragged red fibers","type":"exact"},{"name":"myoclonus epilepsy and ragged red fibres","type":"exact"},{"name":"myoclonus epilepsy associated with ragged-red fibers","type":"exact"},{"name":"myoclonus epilepsy associated with ragged-red fibres","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibers","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibers (MERRF syndrome)","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibres","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibres (MERRF syndrome)","type":"exact"},{"name":"myoencephalopathy ragged-red fiber disease","type":"related"},{"name":"myoencephalopathy ragged-red fibre disease","type":"related"}],"termid":"MONDO:0010790","xrefs":{"Monarch":{"xref_id":"0010790"}}}


id: PBO:0017531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tryptophan-tRNA ligase Wrs1 (predicted)","termid":"PBO:0017531"}


id: FYPO:0000432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of fermentation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal fermentation","termid":"FYPO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased fermentation","synonyms":[{"name":"decreased fermentation during mitotic cell cycle","type":"related"},{"name":"decreased fermentation during vegetative growth","type":"exact"},{"name":"decreased fermentative metabolism","type":"exact"},{"name":"fermentative metabolism: decreased","type":"related"},{"name":"reduced fermentation","type":"exact"}],"termid":"FYPO:0000432"}


id: PR:P36618
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc16 gene.","definition_xrefs":["UniProtKB:P36618","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.08c","synonyms":[{"name":"Spom972h-cdc16","type":"exact"}],"termid":"PR:P36618"}


id: PBO:0060510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF attachment protein beta","termid":"PBO:0060510"}


id: PBO:0070334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 6","termid":"PBO:0070334"}


id: PBO:0066486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 3","termid":"PBO:0066486"}


id: MONDO:0005334
data:
  {"annotated_genes":["SJAG_03994"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013898"}]},"cv_name":"mondo","definition":"A group of inherited conditions characterized initially by hematuria and slowly progressing to renal insufficiency. The most common form is the Alport syndrome (hereditary nephritis with hearing loss) which is caused by mutations in genes for type IV collagen and defective glomerular basement membrane.","definition_xrefs":["EFO:0004128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephritis","termid":"MONDO:0001166"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hereditary nephritis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D009394","SCTID:399340005","MEDGEN:10305","UMLS:C0027706"],"synonyms":[{"name":"familial nephritis","type":"related"},{"name":"hereditary nephritis","type":"exact"},{"name":"nephritis, familial","type":"related"}],"termid":"MONDO:0005334","terms_by_termid":{"MONDO:0013898":null},"xrefs":{"Monarch":{"xref_id":"0005334"}}}


id: MONDO:0012033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bradyopsia is characterized by prolonged electroretinal response suppression leading to difficulties adjusting to changes in luminance, normal to subnormal acuity and photophobia.","definition_xrefs":["Orphanet:75374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"bradyopsia","secondary_identifiers":["icd11.foundation:1497247503","UMLS:C1842073","DOID:0050335","ICD9:368.8","OMIMPS:608415","SCTID:711163009","MEDGEN:331206","GARD:12299","MESH:C564243"],"synonyms":[{"name":"PERRS","type":"exact"},{"name":"bradyopsia","type":"exact"},{"name":"prolonged electroretinal response suppression","type":"exact"}],"termid":"MONDO:0012033","xrefs":{"Monarch":{"xref_id":"0012033"}}}


id: PBO:0082972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic RNA-binding protein; contains an RNA recognition motif (RRM); may have a role in mRNA translation, as suggested by genetic interactions with genes encoding proteins involved in translational initiation","termid":"PBO:0082972"}


id: PBO:0055133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2552","termid":"PBO:0055133"}


id: PBO:0045963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"egl-9 family hypoxia inducible factor 2","termid":"PBO:0045963"}


id: GO:0034964
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary box H/ACA type small RNA transcript into a mature box H/ACA RNA.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA sno(s)RNA metabolic process","termid":"GO:0033979"},{"relation_name":"is_a","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016074"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box H/ACA sRNA processing","type":"narrow"},{"name":"box H/ACA snoRNA processing","type":"narrow"}],"termid":"GO:0034964","terms_by_termid":{"GO:0000495":null}}


id: PBO:0056256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MALL pseudogene 1","termid":"PBO:0056256"}


id: GO:0030668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a dense granule of the type found in apicomplexan parasites.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"merozoite dense granule","termid":"GO:0020026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"merozoite dense granule membrane","termid":"GO:0030668"}


id: GO:0060432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the lung, to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung pattern specification process","termid":"GO:0060432"}


id: SO:0000077
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region sequence that is complementary to a sequence of messenger RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense","secondary_identifiers":["http://en.wikipedia.org/wiki/Antisense"],"termid":"SO:0000077"}


id: PBO:0055472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2905","termid":"PBO:0055472"}


id: PBO:0038339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substance_added","termid":"PBO:0038339"}


id: PBO:0056032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene A4 hydrolase","termid":"PBO:0056032"}


id: PBO:0046154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 2","termid":"PBO:0046154"}


id: PBO:0089593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC complex-Argonaute linker protein Stc1","termid":"PBO:0089593"}


id: GO:0018616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3,5-trihydroxytoluene + O2 = 2,4,6-trioxoheptanoate.","definition_xrefs":["PMID:1254564","UM-BBD_reactionID:r0093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"trihydroxytoluene dioxygenase activity","secondary_identifiers":["MetaCyc:R305-RXN"],"termid":"GO:0018616"}


id: PBO:0050215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 32","termid":"PBO:0050215"}


id: GO:0002671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell tolerance induction","termid":"GO:0002662"},{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte anergy","termid":"GO:0002912"},{"relation_name":"negatively_regulates","term_name":"B cell anergy","termid":"GO:0002515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell anergy","synonyms":[{"name":"down regulation of B cell anergy","type":"exact"},{"name":"down-regulation of B cell anergy","type":"exact"},{"name":"downregulation of B cell anergy","type":"exact"},{"name":"inhibition of B cell anergy","type":"narrow"},{"name":"negative regulation of B lymphocyte anergy","type":"exact"},{"name":"negative regulation of B-cell anergy","type":"exact"},{"name":"negative regulation of B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002671"}


id: PBO:0004808
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.86","termid":"PBO:0004808"}


id: PBO:0084122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hEST1A/B (SMG5/6)-like protein; contributes to environment-sensing adaptive gene expression responses; Esl1p and Esl2p contain a 14-3-3-like domain and a putative PilT N-terminus ribonuclease domain; ESL1 has a paralog, ESL2, that arose from the whole genome duplication","termid":"PBO:0084122"}


id: PBO:0059811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 37","termid":"PBO:0059811"}


id: PBO:0003244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tre1 family protein, involved in vacuolar protein degradation (predicted)","termid":"PBO:0003244"}


id: PR:Q09785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine dehydrogenase [decarboxylating], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11773:SF0","PRO:DNx","OMA:SCHPO00067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine dehydrogenase (decarboxylating), mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.06c","secondary_identifiers":["UniProtKB:Q09785"],"synonyms":[{"name":"Spom972h-GLDC","type":"exact"},{"name":"glycine cleavage system P protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycine decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycine dehydrogenase (aminomethyl-transferring) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09785"}


id: PBO:0043927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine O-octanoyltransferase","termid":"PBO:0043927"}


id: GO:0034583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 21U-RNA, a 21-nucleotide RNA characterized by a uridine 5'-monophosphate and a modified 3' end resistant to periodate degradation. 21U-RNAs are derived from distinct, autonomously expressed loci within the genome.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"21U-RNA binding","termid":"GO:0034583"}


id: PBO:0054408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1804","termid":"PBO:0054408"}


id: GO:0072517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded compartment that forms in the cytoplasm of the host cell, in which virus assembly takes place.","definition_xrefs":["GOC:BHF","PMID:20374631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell viral assembly compartment","secondary_identifiers":["GO:0072516"],"synonyms":[{"name":"host cell viral assembly site","type":"related"},{"name":"host cell virion assembly compartment","type":"exact"},{"name":"viral assembly compartment","type":"exact"},{"name":"viral assembly site","type":"related"},{"name":"virion assembly compartment","type":"exact"}],"termid":"GO:0072517"}


id: MONDO:0013275
data:
  {"annotated_genes":["SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85713],"is_not":false,"summary":null,"term":"MONDO:0013275"}]},"cv_name":"mondo","definition":"Glucosephosphate isomerase (GPI) deficiency is an erythroenzymopathy characterized by chronic nonspherocytic hemolytic anemia.","definition_xrefs":["Orphanet:712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00839":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005570","MONDO:0002280","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"hemolytic anemia due to glucophosphate isomerase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613470","MEDGEN:462080","GARD:16541","UMLS:C3150730"],"synonyms":[{"name":"glucosephosphate isomerase deficiency","type":"exact"},{"name":"hemolytic anemia, nonspherocytic, due to glucose phosphate isomerase deficiency","type":"related"}],"termid":"MONDO:0013275","terms_by_termid":{"MONDO:0013275":null},"xrefs":{"Monarch":{"xref_id":"0013275"}}}


id: MONDO:1011749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear IgA disease, non-human animal","secondary_identifiers":["OMIA:001330"],"termid":"MONDO:1011749","xrefs":{"Monarch":{"xref_id":"1011749"}}}


id: GO:0015214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a pyrimidine nucleoside, a pyrimidine base covalently bonded to a ribose or deoxyribose sugar from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"pyrimidine nucleoside transmembrane transporter activity","termid":"GO:0015214"}


id: GO:0022008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of cells within the nervous system.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurogenesis","secondary_identifiers":["Wikipedia:Neurogenesis"],"synonyms":[{"name":"nervous system cell generation","type":"exact"},{"name":"neural cell differentiation","type":"related"}],"termid":"GO:0022008"}


id: PBO:0054040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1376","termid":"PBO:0054040"}


id: FYPO:0007450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to one or both cell tip(s), but remains there for a shorter time than normal.","definition_xrefs":["PomBase:mah","PMID:15809031","PMID:12789340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal maintenance of protein location at cell tip during vegetative growth","termid":"FYPO:0005464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased maintenance of protein location in cell cortex of cell tip","synonyms":[{"name":"decreased maintenance of protein location in cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"decreased maintenance of protein location in cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"reduced maintenance of protein location in cell cortex of cell tip","type":"exact"}],"termid":"FYPO:0007450"}


id: PBO:0048627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIPC PDZ domain containing family member 3","termid":"PBO:0048627"}


id: GO:0150086
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A single axon terminal bouton making contact onto two or more dendritic spines protruding either from a single dendrite or from multiple dendrites.","definition_xrefs":["PMID:11248111","GOC:bc","PMID:11466428","PMID:7482800","GOC:aruk","PMID:10586883","PMID:29774619","PMID:8366344","PMID:18501438","PMID:22028887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"multiple synapse bouton","synonyms":[{"name":"MSB","type":"exact"},{"name":"multi-synapse","type":"related"},{"name":"multi-synapse bouton","type":"exact"},{"name":"multi-synaptic bouton","type":"exact"},{"name":"multiple spine synapse bouton","type":"exact"},{"name":"multiple synapse","type":"related"},{"name":"multiple-synapse bouton","type":"exact"},{"name":"multisynapse","type":"related"},{"name":"multisynapse bouton","type":"exact"},{"name":"multisynaptic bouton","type":"exact"}],"termid":"GO:0150086"}


id: GO:0016612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex containing a molybdenum-iron cluster found in many species. It is composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase, the molybdenum-iron protein, is tetrameric with an alpha2-beta2 structure, and nitrogenase reductase is a homodimer.","definition_xrefs":["PMID:11566366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogenase complex","termid":"GO:0016610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"molybdenum-iron nitrogenase complex","synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"related"}],"termid":"GO:0016612"}


id: PBO:0089097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF13 family homolog, unknown biological role","termid":"PBO:0089097"}


id: PBO:0049143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase pseudogene 1","termid":"PBO:0049143"}


id: GO:1901604
data:
  {"annotated_genes":["SJAG_02779","SJAG_02780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71340,91571],"is_not":false,"summary":null,"term":"GO:1901604"}]},"cv_name":"molecular_function","definition":"Enables the transfer of dethiobiotin from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02779":null,"SJAG_02780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"dethiobiotin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1901604","terms_by_termid":{"GO:1901604":null}}


id: PBO:0073171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase","termid":"PBO:0073171"}


id: PBO:0039246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member L1","termid":"PBO:0039246"}


id: MONDO:0011811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive cerebellar ataxia-saccadic intrusion syndrome is a rare hereditary ataxia characterized by a progressive cerebellar ataxia associated with disruption of visual fixation by saccadic intrusions (overshooting horizontal saccades with macrosaccadic oscillations and increased velocity of larger saccades). It presents with progressive gait, trunk and limb ataxia with pyramidal tract signs (increased tendon reflexes and Babinski sign), myoclonic jerks, fasciculations, cerebellar dysarthria, sensorimotor axonal neuropathy with impaired joint position, vibration, temperature, pain sensations, pes cavus, and saccadic intrusions with characteristic overshooting horizontal saccades, macrosaccadic oscillations, and increased velocity of larger saccades, without other eye movement disturbances.","definition_xrefs":["Orphanet:95434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive syndromic cerebellar ataxia","termid":"MONDO:0020047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive cerebellar ataxia-saccadic intrusion syndrome","secondary_identifiers":["MESH:C537310","GARD:4952","DOID:0111611","MEDGEN:335442","UMLS:C1846492","OMIM:607317"],"synonyms":[{"name":"SCAR4","type":"exact"},{"name":"SCASI","type":"exact"},{"name":"spinocerebellar ataxia 24","type":"related"},{"name":"spinocerebellar ataxia 24 (formerly)","type":"related"},{"name":"spinocerebellar ataxia 24, formerly","type":"related"},{"name":"spinocerebellar ataxia autosomal recessive 4","type":"related"},{"name":"spinocerebellar ataxia with saccadic Intrusions","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive 4","type":"related"}],"termid":"MONDO:0011811","xrefs":{"Monarch":{"xref_id":"0011811"}}}


id: GO:0071731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitric oxide stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitric oxide","termid":"GO:0071731"}


id: MONDO:0006449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular yolk sac tumor (obsolete MONDO:0006449)","termid":"MONDO:0006449","xrefs":{"Monarch":{"xref_id":"0006449"}}}


id: PBO:0086047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in vacuolar protein sorting; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086047"}


id: GO:0038158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the cytokine granulocyte colony-stimulating factor (G-CSF) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. G-CSF binds to the receptor (CSF3R).","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"granulocyte colony-stimulating factor signaling pathway","synonyms":[{"name":"CSF3 signaling pathway","type":"exact"},{"name":"G-CSF receptor signaling pathway","type":"exact"},{"name":"G-CSF signaling pathway","type":"exact"},{"name":"granulocyte colony-stimulating factor receptor signaling pathway","type":"exact"},{"name":"granulocyte colony-stimulating factor signalling pathway","type":"related"}],"termid":"GO:0038158"}


id: PBO:0083777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nucleolar protein; putative DEAD-box RNA helicase required for maintenance of M1 dsRNA virus; involved in biogenesis of large (60S) ribosomal subunits","termid":"PBO:0083777"}


id: PR:Q8TF80
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf5 gene.","definition_xrefs":["UniProtKB:Q8TF80","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.02","synonyms":[{"name":"Spom972h-wtf5","type":"exact"}],"termid":"PR:Q8TF80"}


id: GO:0047155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxymethylceph-3-em-4-carboxylate + carbamoyl-phosphate = phosphate + a 3-carbamoyloxymethylcephem.","definition_xrefs":["EC:2.1.3.7","MetaCyc:2.1.3.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"3-hydroxymethylcephem carbamoyltransferase activity","secondary_identifiers":["GO:0045447"],"synonyms":[{"name":"3'-hydroxymethylcephem-O-carbamoyltransferase activity","type":"exact"},{"name":"carbamoyl-phosphate:3-hydroxymethylceph-3-em-4-carboxylate carbamoyltransferase activity","type":"related"}],"termid":"GO:0047155"}


id: PBO:0079783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A4","termid":"PBO:0079783"}


id: PBO:0043708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 5","termid":"PBO:0043708"}


id: GO:0098704
data:
  {"annotated_genes":["SJAG_00057","SJAG_03608","SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113618,116652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[110098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[95271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[95273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of a carbohydrate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null,"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"carbohydrate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097319"],"synonyms":[{"name":"carbohydrate import into cell","type":"exact"}],"termid":"GO:0098704","terms_by_termid":{"GO:0098708":null,"GO:0106081":null,"GO:0106082":null,"GO:0140425":null}}


id: PBO:0003584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pof6 interacting protein Sip1, predicted AP-1 accessory protein","termid":"PBO:0003584"}


id: PBO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital sideroblastic anemia","termid":"PBO:0036300"}


id: GO:0016625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.2.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016625"}


id: GO:1903872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombinase mediator complex assembly.","definition_xrefs":["PMID:18347097","GOC:rb","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"DNA recombinase mediator complex assembly","termid":"GO:1903871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of DNA recombinase mediator complex assembly","synonyms":[{"name":"regulation of DNA recombinase mediator complex formation","type":"exact"}],"termid":"GO:1903872"}


id: PR:Q10308
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6C3.05 gene.","definition_xrefs":["UniProtKB:Q10308","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 43 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.05","synonyms":[{"name":"Spom972h-SPAC6C3.05","type":"exact"}],"termid":"PR:Q10308"}


id: PBO:0062873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 7B","termid":"PBO:0062873"}


id: MONDO:0011148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylospinal thoracic dysostosis is an extremely rare skeletal disorder characterized bya short, curved spine and fusion of the spinous processes, short thorax with 'crab-like' configuration of the ribs, underdevelopment of the lungs (pulmonary hypoplasia), severe arthrogryposis and multiple pterygia (webbing of the skin across joints), and underdevelopment of the bones of the mouth.This condition is believed to be inherited in an autosomal recessive manner.It does notappear to be compatible with life.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spondylospinal thoracic dysostosis","secondary_identifiers":["MEDGEN:400937","MESH:C566622","OMIM:601809","UMLS:C1866184"],"synonyms":[{"name":"spondylospinal thoracic dysostosis","type":"exact"}],"termid":"MONDO:0011148","xrefs":{"Monarch":{"xref_id":"0011148"}}}


id: PBO:0056465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase 3","termid":"PBO:0056465"}


id: GO:0042933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine) from one side of a membrane to the other.","definition_xrefs":["GOC:jl","PMID:8837459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"dipeptide transmembrane transporter activity","termid":"GO:0071916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"chrysobactin transmembrane transporter activity","synonyms":[{"name":"chrysobactin transporter activity","type":"related"}],"termid":"GO:0042933"}


