# terms

id: GO:0019746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hopanoids, pentacyclic sterol-like compounds based on the hopane nucleus.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"},{"relation_name":"is_a","term_name":"hopanoid metabolic process","termid":"GO:0019744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"hopanoid biosynthetic process","synonyms":[{"name":"hopanoid anabolism","type":"exact"},{"name":"hopanoid biosynthesis","type":"exact"},{"name":"hopanoid formation","type":"exact"},{"name":"hopanoid synthesis","type":"exact"}],"termid":"GO:0019746"}


id: GO:0099146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic density membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic density membrane (obsolete GO:0099146)","synonyms":[{"name":"intrinsic to postsynaptic specialization membrane","type":"narrow"}],"termid":"GO:0099146"}


id: PBO:0074258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 3A1","termid":"PBO:0074258"}


id: MONDO:0018491
data:
  {"annotated_genes":["SJAG_02791","SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[86406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"},{"annotations":[86448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011152"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurometabolic disorder due to serine deficiency","termid":"MONDO:0018162"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:422519","icd11.foundation:460538363","MEDGEN:663158","SCTID:303098002","UMLS:C0580190","ICD9:270.7"],"termid":"MONDO:0018491","terms_by_termid":{"MONDO:0009736":null,"MONDO:0011152":null,"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0018491"}}}


id: MONDO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transformation of chronic lymphocytic leukemia into aggressive non-Hodgkin's lymphoma, usually diffuse large B-cell lymphoma (immunoblastic or centroblastic variant). Occasional cases of transformation to Hodgkin's lymphoma have also been described, particularly in patients treated with purine nucleotide analogs. Molecular genetic studies suggest that in approximately half of the cases, the lymphoma is clonally related to the underlying chronic lymphocytic leukemia, whereas in the remaining cases the lymphoma probably represents a secondary, unrelated neoplasm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"B-cell chronic lymphocytic leukemia","termid":"MONDO:0004948"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"},{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Richter syndrome","secondary_identifiers":["NCIT:C35424","GARD:7578","SCTID:277550009","UMLS:C0349631","DOID:1703","icd11.foundation:1736108343","MEDGEN:91159"],"synonyms":[{"name":"Richter syndrome","type":"exact"},{"name":"Richter transformation","type":"exact"},{"name":"Richter's syndrome","type":"exact"},{"name":"Richter's transformation","type":"exact"}],"termid":"MONDO:0002083","xrefs":{"Monarch":{"xref_id":"0002083"}}}


id: MOD:01357
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of an L-lysine residue containing common isotopes with two (13)C,3x(2)H labeled methyl groups to form a 2x(13)C,6x(2)H labeled dimethylated L-lysine.","definition_xrefs":["PubMed:16335955","Unimod:510#K","PubMed:12686488"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N6,N6-dimethyl-L-lysine","termid":"MOD:00084"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"2x(13)C,4x(2)H labeled dimethylated residue","termid":"MOD:00927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(13)C,4x(2)H labeled dimethylated L-lysine","synonyms":[{"name":"DiMethyl-C13HD2","type":"related"},{"name":"Dimethyl:2H(4)13C(2)","type":"related"}],"termid":"MOD:01357"}


id: FYPO:0005746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein export from nucleus is decreased when the cell is subject to glucose starvation. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein export from nucleus","termid":"FYPO:0005745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein export from nucleus during glucose starvation","synonyms":[{"name":"decreased protein export from nucleus during cellular response to glucose starvation","type":"exact"},{"name":"decreased protein export from nucleus during glucose depletion","type":"exact"},{"name":"decreased protein export from nucleus during glucose deprivation","type":"exact"},{"name":"decreased protein export from nucleus during glucose limitation","type":"related"},{"name":"reduced protein export from nucleus during glucose starvation","type":"exact"}],"termid":"FYPO:0005746"}


id: PBO:0012569
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae YPT1","termid":"PBO:0012569"}


id: PBO:0036512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb1 (predicted)","termid":"PBO:0036512"}


id: MONDO:0012350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"atypical hemolytic-uremic syndrome","termid":"MONDO:0016244"},{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"},{"relation_name":"is_a","term_name":"non-immunoglobulin-mediated membranoproliferative glomerulonephritis","termid":"MONDO:0018013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"complement factor H deficiency","secondary_identifiers":["GARD:18551","MESH:C562875","SCTID:234622003","UMLS:C0398777","MEDGEN:96024","OMIM:609814","NANDO:2200791","ICD9:279.8"],"synonyms":[{"name":"CFHD","type":"related"},{"name":"Cfh deficiency","type":"related"},{"name":"complement factor H deficiency","type":"exact"},{"name":"factor H deficiency","type":"related"}],"termid":"MONDO:0012350","xrefs":{"Monarch":{"xref_id":"0012350"}}}


id: PBO:0051024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 4","termid":"PBO:0051024"}


id: GO:0030770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + demethylmacrocin = S-adenosyl-L-homocysteine + H+ + macrocin.","definition_xrefs":["EC:2.1.1.102","RHEA:17573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"demethylmacrocin O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02859","MetaCyc:DEMETHYLMACROCIN-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:demethylmacrocin 2'''-O-methyltransferase activity","type":"related"},{"name":"demethylmacrocin methyltransferase activity","type":"related"}],"termid":"GO:0030770"}


id: PBO:0113816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyltransferase activity","termid":"PBO:0113816"}


id: GO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the smaller branches of an axon that emanate from the main axon cylinder.","definition_xrefs":["NIF_Subcellular:sao1470140754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon collateral","termid":"GO:0044303"}


id: PBO:0040003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 14 effector protein","termid":"PBO:0040003"}


id: GO:0035998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 7,8-dihydroneopterin 3'-triphosphate.","definition_xrefs":["UniPathway:UPA00848","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete 7,8-dihydroneopterin 3'-triphosphate biosynthetic process (obsolete GO:0035998)","synonyms":[{"name":"7,8-dihydroneopterin 3'-triphosphate anabolism","type":"exact"},{"name":"7,8-dihydroneopterin 3'-triphosphate biosynthesis","type":"exact"},{"name":"7,8-dihydroneopterin 3'-triphosphate formation","type":"exact"},{"name":"7,8-dihydroneopterin 3'-triphosphate synthesis","type":"exact"}],"termid":"GO:0035998"}


id: GO:1901723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation involved in kidney development.","definition_xrefs":["PMID:18182616","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"negatively_regulates","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in kidney development","synonyms":[{"name":"down regulation of cell proliferation involved in kidney development","type":"exact"},{"name":"down-regulation of cell proliferation involved in kidney development","type":"exact"},{"name":"downregulation of cell proliferation involved in kidney development","type":"exact"},{"name":"inhibition of cell proliferation involved in kidney development","type":"narrow"}],"termid":"GO:1901723"}


id: GO:0008876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + ubiquinone = D-glucono-1,5-lactone + ubiquinol.","definition_xrefs":["RHEA:22152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose dehydrogenase activity","termid":"GO:0004344"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"quinoprotein glucose dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00305","EC:1.1.5.2","MetaCyc:RXN0-6373"],"synonyms":[{"name":"D-glucose:(pyrroloquinoline-quinone) 1-oxidoreductase activity","type":"related"},{"name":"D-glucose:ubiquinone oxidoreductase activity","type":"related"},{"name":"glucose dehydrogenase (PQQ-dependent) activity","type":"related"},{"name":"glucose dehydrogenase (pyrroloquinoline-quinone) activity","type":"exact"},{"name":"quinoprotein D-glucose dehydrogenase activity","type":"related"}],"termid":"GO:0008876"}


id: MONDO:0958278
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86646],"is_not":false,"summary":null,"term":"MONDO:0958278"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and characteristic brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620746","Orphanet:664430"],"termid":"MONDO:0958278","terms_by_termid":{"MONDO:0958278":null},"xrefs":{"Monarch":{"xref_id":"0958278"}}}


id: MONDO:0009884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet prostacyclin receptor defect","secondary_identifiers":["UMLS:C1849774","MESH:C564884","OMIM:262875","MEDGEN:337912"],"synonyms":[{"name":"Vienna-Hietzing defect","type":"related"},{"name":"platelet prostacyclin receptor defect","type":"exact"}],"termid":"MONDO:0009884","xrefs":{"Monarch":{"xref_id":"0009884"}}}


id: MONDO:0008162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otitis media, susceptibility to","secondary_identifiers":["OMIM:166760","UMLS:C1833692","MEDGEN:318936"],"synonyms":[{"name":"OMS","type":"related"},{"name":"come/Rom","type":"related"},{"name":"otitis Media, chronic/recurrent","type":"related"},{"name":"otitis media, susceptibility to","type":"exact"}],"termid":"MONDO:0008162","xrefs":{"Monarch":{"xref_id":"0008162"}}}


id: GO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to osteopontin.","definition_xrefs":["PMID:16005200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-osteopontin complex","synonyms":[{"name":"ITGA9-ITGB1-SPP1 complex","type":"narrow"}],"termid":"GO:0071127"}


id: GO:0040018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organism growth","termid":"GO:0040014"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"multicellular organism growth","termid":"GO:0035264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of multicellular organism growth","synonyms":[{"name":"positive regulation of body growth","type":"exact"},{"name":"positive regulation of body size","type":"exact"}],"termid":"GO:0040018"}


id: GO:0042247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of a follicular epithelium, such that they all orient to similar coordinates.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of follicular epithelium","termid":"GO:0016334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity of follicular epithelium","termid":"GO:0042247"}


id: PBO:0075903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4","termid":"PBO:0075903"}


id: PBO:0065195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 6","termid":"PBO:0065195"}


id: PBO:0055791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LOXL1 antisense RNA 1","termid":"PBO:0055791"}


id: PATO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of female and external sexual characteristics of male.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphrodite","termid":"PATO:0001827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female pseudohermaphrodite","termid":"PATO:0001829"}


id: PBO:0050521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D9","termid":"PBO:0050521"}


id: PBO:0087231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seipin involved in lipid droplet (LD) assembly; controls lipid particle morphology, number, and size; promotes initiation of LD formation on the ER; ensures that LDs bud from the ER towards the cytosolic side of the membrane; forms a complex with Ldb16p at ER-LD contact sites, stabilizing these sites; null mutants have localized accumulation of phosphatidic acid (PA) marker proteins; BSCL2, human homolog implicated in congenital lipodystrophy, complements yeast null mutant","termid":"PBO:0087231"}


id: GO:0039573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of complement activation. The activation of complement involves the sequential proteolysis of proteins to generate enzymes with catalytic activities. The biological functions of the complement include opsonization, inflammation, lysis of immune complexes, or enhancement of the humoral immune response. For example, the virus complement control protein (VCP) of vaccinia virus, and the complement control protein of herpesvirus inhibit C3 convertase.","definition_xrefs":["PMID:21191012","PMID:7745740"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host complement activation (obsolete GO:0039573)","synonyms":[{"name":"inhibition of host complement activation by virus","type":"exact"},{"name":"inhibition of host complement cascade by virus","type":"exact"}],"termid":"GO:0039573"}


id: MONDO:0014164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the TMEM231 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 11","secondary_identifiers":["OMIM:615397","MEDGEN:815682","GARD:15957","UMLS:C3809352"],"synonyms":[{"name":"MKS11","type":"related"},{"name":"Meckel syndrome caused by mutation in TMEM231","type":"exact"},{"name":"Meckel syndrome, type 11","type":"exact"},{"name":"TMEM231 Meckel syndrome","type":"exact"},{"name":"meckel syndrome 11","type":"exact"}],"termid":"MONDO:0014164","xrefs":{"Monarch":{"xref_id":"0014164"}}}


id: PBO:0076241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 2 pseudogene 2","termid":"PBO:0076241"}


id: MONDO:0001407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the trachea","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"trachea neoplasm","termid":"MONDO:0021210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"tracheal cancer","secondary_identifiers":["ICD9:162.0","SCTID:363432004","DOID:11920","MEDGEN:102274","ICD10CM:C33","NCIT:C9346","UMLS:C0153489"],"synonyms":[{"name":"Ca trachea","type":"exact"},{"name":"cancer of trachea","type":"exact"},{"name":"malignant neoplasm of the trachea","type":"exact"},{"name":"malignant neoplasm of trachea","type":"exact"},{"name":"malignant trachea neoplasm","type":"exact"},{"name":"malignant trachea tumor","type":"exact"},{"name":"malignant trachea tumour","type":"exact"},{"name":"malignant tracheal neoplasm","type":"exact"},{"name":"malignant tracheal tumor","type":"exact"},{"name":"malignant tracheal tumour","type":"exact"},{"name":"malignant tumor of the trachea","type":"exact"},{"name":"malignant tumor of trachea","type":"exact"},{"name":"malignant tumour of the trachea","type":"exact"},{"name":"malignant tumour of trachea","type":"exact"},{"name":"trachea cancer","type":"exact"},{"name":"tracheal neoplasm","type":"broad"}],"termid":"MONDO:0001407","xrefs":{"Monarch":{"xref_id":"0001407"}}}


id: PBO:0053072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipopolysaccharide binding protein","termid":"PBO:0053072"}


id: PBO:0030883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_organization_during_vegetative_growth","termid":"PBO:0030883"}


id: PBO:0060104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 5","termid":"PBO:0060104"}


id: PBO:0003119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 variant, CENP-T ortholog (predicted)","termid":"PBO:0003119"}


id: PBO:0091240
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncation LoF variant reverts to normal in strain CBS5557","termid":"PBO:0091240"}


id: MONDO:0021191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant ependymoma (obsolete MONDO:0021191)","termid":"MONDO:0021191","xrefs":{"Monarch":{"xref_id":"0021191"}}}


id: SO:0001531
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to he cytoplasm.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"nuclear_export_signal","secondary_identifiers":["http://en.wikipedia.org/wiki/Nuclear_export_signal"],"synonyms":[{"name":"NES","type":"exact"},{"name":"nuclear export signal","type":"exact"}],"termid":"SO:0001531"}


id: FYPO:0001856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent when the cell is subject to iron ion starvation. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal transcription during iron starvation","synonyms":[{"name":"normal transcription during iron depletion","type":"exact"},{"name":"normal transcription during iron deprivation","type":"exact"},{"name":"normal transcription during iron ion starvation","type":"exact"},{"name":"normal transcription during iron starvation during mitotic cell cycle","type":"related"},{"name":"normal transcription during iron starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0001856"}


id: GO:0061642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuron growth cone is directed to a specific target site in response to an attractive chemical signal.","definition_xrefs":["GOC:krc","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of axon","termid":"GO:0061642"}


id: PBO:0043361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLSTN2 antisense RNA 1","termid":"PBO:0043361"}


id: PBO:0079965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 3","termid":"PBO:0079965"}


id: FYPO:0003448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, is shaped in the form of a spheroid, has a larger volume than normal, and in which vacuoles are more visible (usually by microscopy) than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"viable swollen spheroid vegetative cell","termid":"FYPO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"viable swollen vacuolated spheroid vegetative cell","synonyms":[{"name":"viable enlarged vacuolated spheroid vegetative cell","type":"related"},{"name":"viable enlarged volume vacuolated spheroid vegetative cell","type":"exact"},{"name":"viable large vacuolated spheroid vegetative cell","type":"related"},{"name":"viable swollen rounded vacuolated vegetative cell","type":"exact"},{"name":"viable swollen vacuolated spheroid cell during vegetative growth","type":"exact"},{"name":"viable swollen vacuolated spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003448"}


id: PR:Q9UTL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klp8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTL2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.14","synonyms":[{"name":"Spom972h-klp8","type":"exact"}],"termid":"PR:Q9UTL2"}


id: PBO:0086488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative oxidoreductase; required for cell viability","termid":"PBO:0086488"}


id: MONDO:0020159
data:
  {"annotated_genes":["SJAG_00516","SJAG_03457","SJAG_00212","SJAG_02399","SJAG_01471","SJAG_00120","SJAG_00660"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86759,86760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[86607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[84693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[86342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[86341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[85527,85526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[86620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[86155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013755"},{"annotations":[85133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00660":null,"SJAG_01471":null,"SJAG_02399":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital entropion","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:20392000","UMLS:C0266579","MedDRA:10014923","MEDGEN:540011","Orphanet:98568"],"termid":"MONDO:0020159","terms_by_termid":{"MONDO:0009053":null,"MONDO:0010208":null,"MONDO:0010572":null,"MONDO:0013051":null,"MONDO:0013755":null,"MONDO:0014706":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0020159"}}}


id: PBO:0079601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 E4 pseudogene","termid":"PBO:0079601"}


id: PBO:0031591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_process","termid":"PBO:0031591"}


id: PBO:0080973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8 opposite strand pseudogene 2","termid":"PBO:0080973"}


id: GO:0061380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior colliculus over time, from its formation to the mature structure. The superior colliculus is also known as the optic tectum or simply tectum and is a paired structure that forms a major component of the vertebrate midbrain.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"corpora quadrigemina development","termid":"GO:0061378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior colliculus development","termid":"GO:0061380"}


id: PR:Q09708
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12G12.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.16c","synonyms":[{"name":"Spom972h-SPAC12G12.16c","type":"exact"}],"termid":"PR:Q09708"}


id: GO:1990062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex first characterized in human and comprised of a R2TP module (R2TP complex), a prefoldin-like module (containing both prefoldin-like proteins and canonical prefoldins), WD40 repeat protein Monad/WDR92 and DNA-dependent RNA polymerase subunit RPB5. This complex might have chaperone activity.","definition_xrefs":["PMID:21925213","PMID:20453924","PMID:22418846","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RPAP3/R2TP/prefoldin-like complex","synonyms":[{"name":"R2TP/prefoldin-like complex","type":"related"}],"termid":"GO:1990062"}


id: MONDO:0006053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A leiomyoma that involves the kidney.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal leiomyoma","secondary_identifiers":["EFO:1000050","MEDGEN:1691847","NCIT:C159209","UMLS:C5204259"],"synonyms":[{"name":"kidney leiomyoma","type":"exact"},{"name":"leiomyoma of kidney","type":"exact"}],"termid":"MONDO:0006053","xrefs":{"Monarch":{"xref_id":"0006053"}}}


id: GO:0140449
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90858],"is_not":false,"summary":null,"term":"GO:0140449"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together the centromeric region of a chromosome and the inner nuclear membrane by interacting with both the centromere/kinetochore complex and the nuclear membrane, in order to establish and maintain the centromere/kinetochore location.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"centromere-nuclear envelope anchor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere nuclear envelope anchor activity","type":"exact"},{"name":"centromere nuclear envelope tether activity","type":"exact"},{"name":"centromere-inner nuclear envelope anchor activity","type":"exact"},{"name":"centromere-inner nuclear envelope tether activity","type":"exact"},{"name":"chromosome, centromeric region-nuclear envelope anchor activity","type":"exact"},{"name":"nuclear envelope-centromere anchor activity","type":"exact"},{"name":"nuclear envelope-centromere tether activity","type":"exact"}],"termid":"GO:0140449","terms_by_termid":{"GO:0140449":null}}


id: PBO:0026837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G1_phase","termid":"PBO:0026837"}


id: PBO:0050154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 10","termid":"PBO:0050154"}


id: PBO:0048587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 1","termid":"PBO:0048587"}


id: PBO:0046553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 7","termid":"PBO:0046553"}


id: FYPO:0002527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the cell division site for longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of protein localization to cell division site","synonyms":[{"name":"increased duration of protein localisation to cell division site","type":"exact"},{"name":"increased duration of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"increased duration of protein recruitment to cell division site","type":"related"},{"name":"prolonged protein localization to cell division site","type":"exact"}],"termid":"FYPO:0002527"}


id: PBO:0048722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminase 2","termid":"PBO:0048722"}


id: PBO:0042022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 80","termid":"PBO:0042022"}


id: FYPO:0000769
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118814,118809,118743,118816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003779"},{"annotations":[118653,118652,118665,118656,118660,118668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001556"},{"annotations":[118950],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"abnormal endomembrane system morphology","termid":"FYPO:0000353"},{"relation_name":"output_of","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03940":null,"SJAG_04464":null},"genotype_count":11,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002403"],"is_obsolete":false,"name":"abnormal nuclear envelope morphology during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_03449","SJAG_02763","SJAG_01745","SJAG_03940","SJAG_04464","SJAG_01906"],"single_locus_genotype_uniquenames":["nem1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","lem2delta","nem2delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta"],"synonyms":[{"name":"abnormal nuclear envelope morphology during mitotic cell cycle","type":"exact"},{"name":"abnormal nuclear membrane morphology","type":"narrow"}],"termid":"FYPO:0000769","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO_EXT:0000001":null}}


id: PBO:0042748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein U pseudogene 1","termid":"PBO:0042748"}


id: FYPO:0006299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere outer repeat regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere outer repeat","termid":"FYPO:0002346"},{"relation_name":"is_a","term_name":"increased chromatin silencing at centromere","termid":"FYPO:0005071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased chromatin silencing at centromere outer repeat","synonyms":[{"name":"increased chromatin silencing at centromere otr","type":"exact"},{"name":"increased chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"increased chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"increased chromatin silencing at pericentric region","type":"related"},{"name":"increased chromatin silencing at pericentromeric region","type":"related"},{"name":"increased heterochromatin silencing at centromere outer repeat region","type":"exact"}],"termid":"FYPO:0006299"}


id: PBO:0046156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 4","termid":"PBO:0046156"}


id: PBO:0072411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 16","termid":"PBO:0072411"}


id: GO:0018499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-2,3-dihydrodiol DDT + NADP+ = NADPH + 2,3-dihydroxy DDT.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-2,3-dihydrodiol DDT dehydrogenase activity (obsolete GO:0018499)","termid":"GO:0018499"}


id: FYPO:0005919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to TOP-53. Cells stop growing (and may die) at a concentration of TOP-53 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to TOP-53","synonyms":[{"name":"hypersensitive to TOP-53","type":"exact"},{"name":"sensitive to TOP-53 during mitotic cell cycle","type":"related"},{"name":"sensitive to TOP-53 during vegetative growth","type":"exact"}],"termid":"FYPO:0005919"}


id: PBO:0028876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_M26_site","termid":"PBO:0028876"}


id: MONDO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A physical or cognitive mental abnormality caused by maternal alcohol consumption and its toxic effect on the developing embryo during pregnancy.","definition_xrefs":["NCIT:C92727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal alcohol spectrum disorder","termid":"MONDO:0000408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol-related birth defect","secondary_identifiers":["DOID:0050668","MEDGEN:459973","UMLS:C3146244"],"synonyms":[{"name":"ARBD","type":"exact"},{"name":"alcohol related birth defect","type":"exact"}],"termid":"MONDO:0000395","xrefs":{"Monarch":{"xref_id":"0000395"}}}


id: GO:0106117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an acidocalcisome. An acidocalcisome is an electron-dense acidic membrane-bounded organelle which contains a matrix of pyrophosphate and polyphosphates with bound calcium and other cations.","definition_xrefs":["GO:0020022","PMID:25964650","PMID:26523947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acidocalcisome organization","synonyms":[{"name":"acidocalcisome biogenesis","type":"exact"},{"name":"acidocalcisome organisation","type":"exact"},{"name":"acidocalcisome organization and biogenesis","type":"exact"},{"name":"metachromatic granule organization","type":"exact"},{"name":"polyphosphate vacuole organization","type":"related"},{"name":"volutin granule organization","type":"exact"}],"termid":"GO:0106117"}


id: PBO:0044306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 1","termid":"PBO:0044306"}


id: PBO:0029016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-centromeric_outer_repeat_transcript-derived_siRNA_absent","termid":"PBO:0029016"}


id: MONDO:0003326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ganglioneuroblastoma characterized by the presence of neuroblastic cells in a Schwannian stroma, without the presence of hemorrhagic neuroblastic nodules.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglioneuroblastoma","termid":"MONDO:0005035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermixed schwannian stroma-rich ganglioneuroblastoma","secondary_identifiers":["MEDGEN:274565","NCIT:C42057","DOID:5194","UMLS:C1517444"],"synonyms":[{"name":"ganglioneuroblastoma, intermixed","type":"exact"},{"name":"ganglioneuroblastoma, intermixed (Schwannian Stroma-rich)","type":"exact"}],"termid":"MONDO:0003326","xrefs":{"Monarch":{"xref_id":"0003326"}}}


id: PBO:0077417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 151B","termid":"PBO:0077417"}


id: MONDO:0015461
data:
  {"annotated_genes":["SJAG_01370"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","definition":"Short rib-polydactyly syndromes are a group of bone malformations characterized by a narrow thorax and polydactyly (usually preaxial).","definition_xrefs":["Orphanet:1505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01370":null},"genotype_count":0,"is_obsolete":false,"name":"short rib-polydactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:205484001","MESH:D012779","icd11.foundation:960900212","GARD:18726","ICD9:756.3","MEDGEN:11412","NCIT:C85065","UMLS:C0036996"],"termid":"MONDO:0015461","terms_by_termid":{"MONDO:0054565":null},"xrefs":{"Monarch":{"xref_id":"0015461"}}}


id: MONDO:0017810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of amyloidosis characterized by accumulation and extensive visceral deposition of anamyloidogenic variant of beta 2 microglobulin leading to progressive gastrointestinal dysfunction, Sjögren syndrome and autonomic neuropathy.","definition_xrefs":["Orphanet:314652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABeta2M amyloidosis","termid":"MONDO:0018590"},{"relation_name":"is_a","term_name":"hereditary amyloidosis","termid":"MONDO:0018634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"variant ABeta2M amyloidosis","secondary_identifiers":["SCTID:722292000","UMLS:C4302669","icd11.foundation:1466418791","DOID:0080929","MEDGEN:928338","GARD:21382"],"synonyms":[{"name":"autosomal dominant beta2-microglobulinic amyloidosis","type":"exact"}],"termid":"MONDO:0017810","xrefs":{"Monarch":{"xref_id":"0017810"}}}


id: MONDO:0005271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immune response that occurs following re-exposure to an innocuous antigen, and that requires the presence of existing antibodies against that antigen. This response involves the binding of IgE to mast cells, and may worsen with repeated exposures.","definition_xrefs":["NCIT:C114476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"allergic disease","secondary_identifiers":["MEDGEN:9370","MESH:D006967","SCTID:609328004","ICD9:V15.09","UMLS:C0020517","DOID:1205","ICD9:995.3"],"synonyms":[{"name":"allergic disease or disorder","type":"exact"},{"name":"allergic form of disease or disorder","type":"exact"},{"name":"allergic form of immune system disease","type":"exact"},{"name":"allergic hypersensitivity disease","type":"related"},{"name":"allergic reaction","type":"exact"},{"name":"allergic response","type":"exact"},{"name":"allergy","type":"exact"},{"name":"disorder of type I hypersensitivity","type":"exact"},{"name":"hypersensitivity","type":"related"},{"name":"hypersensitivity reaction type I disease","type":"exact"},{"name":"type I hypersensitivity disease","type":"exact"}],"termid":"MONDO:0005271","xrefs":{"Monarch":{"xref_id":"0005271"}}}


id: PBO:0055081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2499","termid":"PBO:0055081"}


id: PBO:0085805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; dgr1 null mutant is resistant to 2-deoxy-D-glucose","termid":"PBO:0085805"}


id: PBO:0051523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor accessory protein like 1","termid":"PBO:0051523"}


id: PBO:0087424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit A of the V1 peripheral membrane domain of V-ATPase; protein precursor undergoes self-catalyzed splicing to yield the extein Tfp1p and the intein Vde (PI-SceI), which is a site-specific endonuclease; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits; involved in methionine restriction extension of chronological lifespan in an autophagy-dependent manner","termid":"PBO:0087424"}


id: _global:directly_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulated_by","secondary_identifiers":["RO:0002022"],"termid":"_global:directly_regulated_by"}


id: MONDO:0008193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonian-pyramidal syndrome","termid":"MONDO:0009830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralysis agitans, juvenile, of Hunt","secondary_identifiers":["MEDGEN:66768","SCTID:43647007","UMLS:C0238344","MESH:C562469","OMIM:168100","GARD:10359","ICD9:333.0"],"synonyms":[{"name":"Parkinson disease, juvenile, of Hunt","type":"related"},{"name":"paralysis agitans, juvenile, of Hunt","type":"exact"}],"termid":"MONDO:0008193","xrefs":{"Monarch":{"xref_id":"0008193"}}}


id: PBO:0090246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVE domain (PUA-related) protein, implicated in tRNA metabolism (possible RNA binding domain associated with tRNA methyltransferases)","termid":"PBO:0090246"}


id: PBO:0056157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mono-ADP ribosylhydrolase 2","termid":"PBO:0056157"}


id: MONDO:0008571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Blount disease","termid":"MONDO:0017194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Blount disease, infantile","secondary_identifiers":["UMLS:C0220757","GARD:15120","OMIM:188700","MEDGEN:65091"],"synonyms":[{"name":"Blount disease, infantile","type":"exact"},{"name":"Osteochondrosis deformans tibiae, infantile","type":"related"},{"name":"tibia vara, infantile","type":"related"}],"termid":"MONDO:0008571","xrefs":{"Monarch":{"xref_id":"0008571"}}}


id: PBO:0057606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-3","termid":"PBO:0057606"}


id: GO:0032907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of transforming growth factor-beta3 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta production","termid":"GO:0071604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transforming growth factor beta3 production","synonyms":[{"name":"TGF-B3 production","type":"exact"},{"name":"TGFB3 production","type":"exact"},{"name":"transforming growth factor-beta3 production","type":"exact"}],"termid":"GO:0032907"}


id: PBO:0082468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calmodulin; Ca2+ binding protein that regulates Ca2+ independent processes (mitosis, bud growth, actin organization, endocytosis, etc.) and Ca2+ dependent processes (stress-activated pathways), targets include Nuf1p, Myo2p and calcineurin; binds to the Hog1p MAPK in response to hyperosmotic stress; potentiates membrane tubulation and constriction mediated by the Rvs161p-Rvs167p complex; human CALM1 or CALM2 functionally complement repression induced inviability","termid":"PBO:0082468"}


id: PBO:0067862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 164","termid":"PBO:0067862"}


id: PBO:0086465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative methyltransferase; predicted to be involved in ribosome biogenesis; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; not an essential gene; YMR310C has a paralog, YGR283C, that arose from the whole genome duplication","termid":"PBO:0086465"}


id: GO:0032395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an MHC class II protein complex and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"MHC class II receptor activity","synonyms":[{"name":"T cell receptor activity","type":"related"},{"name":"alpha-beta T cell receptor activity","type":"related"},{"name":"gamma-delta T cell receptor activity","type":"related"}],"termid":"GO:0032395"}


id: GO:1990419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an elemental metal stimulus.","definition_xrefs":["PMID:22688007"],"gene_count":0,"genotype_count":0,"name":"obsolete response to elemental metal (obsolete GO:1990419)","synonyms":[{"name":"response to elemental metal","type":"exact"}],"termid":"GO:1990419"}


id: MONDO:0017112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated unilateral hemispheric cerebellar hypoplasia is a rare, non-syndromic cerebellar malformation characterized by loss of volume in the right or left cerebellar hemisphere, with intact vermis and no other neurological anomalies (i.e. normal cerebral hemispheres, fourth ventricle, pons, medulla and midbrain). Patients may be asymptomatic or may present developmental and speech delay, hypotonia, abnormal ocular movements, persistent headaches and/or peripheral vertigo and ataxia. Neurological examination is otherwise normal.","definition_xrefs":["Orphanet:269218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated unilateral hemispheric cerebellar hypoplasia","secondary_identifiers":["MEDGEN:1638819","SCTID:766934006","UMLS:C4707885","icd11.foundation:1960392411","GARD:20995"],"termid":"MONDO:0017112","xrefs":{"Monarch":{"xref_id":"0017112"}}}


id: PBO:0053873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1149","termid":"PBO:0053873"}


id: PBO:0111870
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin","termid":"PBO:0111870"}


id: FYPO:0003469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which small nuclear RNA (snRNA) splicing is normal (i.e. indistinguishable from wild type). All snRNA splicing may be normal, or one splicing of or more specific snRNA molecules may be specifically assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA splicing","termid":"FYPO:0003468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal snRNA splicing","synonyms":[{"name":"normal snRNA splicing during mitotic cell cycle","type":"related"},{"name":"normal snRNA splicing during vegetative growth","type":"exact"}],"termid":"FYPO:0003469"}


id: PBO:0068638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 18, pseudogene","termid":"PBO:0068638"}


id: GO:0034470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in the conversion of one or more primary non-coding RNA (ncRNA) transcripts into one or more mature ncRNA molecules.","definition_xrefs":["PMID:27573892","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA processing (obsolete GO:0034470)","termid":"GO:0034470"}


id: PBO:0089586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial processing peptidase (MPP) complex beta subunit Mas1","termid":"PBO:0089586"}


id: GO:0140431
data:
  {"annotated_genes":["SJAG_05257"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106537],"is_not":false,"summary":null,"term":"GO:0140431"}]},"cv_name":"molecular_function","definition":"Binding to a DNA site that has neither a purine nor a pyrimidine base. Apurinic sites can form spontaneously or when DNA glycosylase removes a damaged base.","definition_xrefs":["PMID:23245849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damaged DNA binding","termid":"GO:0003684"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DNA-(abasic site) binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA AP site binding","type":"exact"},{"name":"DNA-(apurinic site) binding","type":"narrow"},{"name":"DNA-(apurinic site/apyrimidinic site) binding","type":"exact"},{"name":"DNA-(apyrimidinic site) binding","type":"narrow"}],"termid":"GO:0140431","terms_by_termid":{"GO:0140431":null}}


id: PBO:0057240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 431","termid":"PBO:0057240"}


id: GO:0052822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 3-methylguanine + H2O = DNA with abasic site + 3-methylguanine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methylguanine and the deoxyribose sugar to remove the 3-methylguanine, leaving an abasic site.","definition_xrefs":["PMID:9224623","PMID:10872450","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-3-methylbase glycosylase activity","termid":"GO:0043733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"DNA-3-methylguanine glycosylase activity","termid":"GO:0052822"}


id: GO:0050078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + malonate = acetate + malonyl-CoA.","definition_xrefs":["EC:2.8.3.3","RHEA:18817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"malonate CoA-transferase activity","secondary_identifiers":["KEGG_REACTION:R00743","MetaCyc:MALONATE-COA-TRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:malonate CoA-transferase activity","type":"related"},{"name":"malonate coenzyme A-transferase activity","type":"related"}],"termid":"GO:0050078"}


id: GO:0007428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of primary branches in the open tracheal system. These form from small groups of cells that migrate out at specific positions, organizing into tubes as they migrate. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:29844090","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in open tracheal system development","termid":"GO:0060446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary branching, open tracheal system","synonyms":[{"name":"primary tracheal branching","type":"exact"}],"termid":"GO:0007428"}


id: SO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Archaeosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"archaeosine","secondary_identifiers":["RNAMOD:049"],"synonyms":[{"name":"G+","type":"exact"}],"termid":"SO:0001323"}


id: PBO:0081129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP1 zinc finger protein","termid":"PBO:0081129"}


id: SO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The maximal intersection of exon and UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_region","termid":"SO:0000852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noncoding_region_of_exon","synonyms":[{"name":"noncoding region of exon","type":"exact"}],"termid":"SO:0001214"}


id: PBO:0087139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that binds specific mRNAs and interacts with She3p; part of the mRNA localization machinery that restricts accumulation of certain proteins to the bud; binds to ER-derived membranes and targets mRNAs to cortical ER","termid":"PBO:0087139"}


id: GO:1900297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hexasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"hexasaccharide transport","termid":"GO:2001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of hexasaccharide transport","termid":"GO:1900297"}


id: PBO:0089132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-PM contact site phospholipid-binding protein Hob2","termid":"PBO:0089132"}


id: MONDO:0850349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astroblastoma that is characterized by astroblastoma-like morphology with MN1 rearrangements involving the meningioma 1 (MN1) gene on chromosome 22q.","definition_xrefs":["DOID:0080904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astroblastoma","termid":"MONDO:0016707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astroblastoma, MN1-altered","termid":"MONDO:0850349","xrefs":{"Monarch":{"xref_id":"0850349"}}}


id: MONDO:0018694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired abnormal communication between the trachea and the esophagus.","definition_xrefs":["NCIT:C35080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"isolated tracheo-esophageal fistula","secondary_identifiers":["GARD:21895","Orphanet:454750"],"synonyms":[{"name":"H-type tracheoesophageal fistula","type":"exact"},{"name":"isolated tracheoesophageal fistula","type":"related"},{"name":"tracheo-esophageal fistula","type":"exact"},{"name":"tracheoesophageal fistula","type":"exact"}],"termid":"MONDO:0018694","xrefs":{"Monarch":{"xref_id":"0018694"}}}


id: PATO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer being thin and lacking outgrowths.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pin-like","termid":"PATO:0002458"}


id: MONDO:0044995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the parasympathetic nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasympathetic nervous system disorder","secondary_identifiers":["MEDGEN:148205","UMLS:C0750945","SCTID:46091002"],"synonyms":[{"name":"disease of parasympathetic nervous system","type":"exact"},{"name":"disease or disorder of parasympathetic nervous system","type":"exact"},{"name":"disorder of parasympathetic nervous system","type":"exact"},{"name":"parasympathetic nervous system disease","type":"exact"},{"name":"parasympathetic nervous system disease or disorder","type":"exact"}],"termid":"MONDO:0044995","xrefs":{"Monarch":{"xref_id":"0044995"}}}


id: GO:0033687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of osteoblasts, resulting in the expansion of an osteoblast cell population. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast proliferation","termid":"GO:0033687"}


id: SO:0001098
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with magnesium ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_magnesium_ion_contact_site","secondary_identifiers":["BS:00187"],"synonyms":[{"name":"Mg_contact_site","type":"exact"},{"name":"polypeptide magnesium ion contact site","type":"exact"}],"termid":"SO:0001098"}


id: FYPO:0000542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein transport is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport during vegetative growth","termid":"FYPO:0000540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of protein transport during vegetative growth","synonyms":[{"name":"increased rate of protein transport during mitotic cell cycle","type":"related"},{"name":"protein transport: increased rate","type":"related"}],"termid":"FYPO:0000542"}


id: GO:0072152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesangial cell fate commitment","termid":"GO:0072151"},{"relation_name":"part_of","term_name":"glomerular mesangial cell differentiation","termid":"GO:0072008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular mesangial cell fate commitment","termid":"GO:0072152"}


id: PBO:0003029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase (predicted)","termid":"PBO:0003029"}


id: GO:0043232
data:
  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id: GO:0034988
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id: MONDO:0015009
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id: PBO:0080646
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id: GO:0045939
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id: GO:0018272
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id: GO:0090270
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id: PBO:0073368
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id: MONDO:0016940
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id: PBO:0077131
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id: GO:1901745
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id: MONDO:1012223
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id: PBO:0047739
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id: PBO:0090065
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id: GO:0070456
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id: MONDO:0015653
data:
  {"annotated_genes":["SJAG_02774","SJAG_03081","SJAG_01507"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0034106"},{"annotations":[86236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044319"},{"annotations":[85166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014855"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01507":null,"SJAG_02774":null,"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"monogenic epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680430","MEDGEN:1842675","GARD:20086","Orphanet:166472"],"synonyms":[{"name":"monogenic disease with epilepsy","type":"exact"}],"termid":"MONDO:0015653","terms_by_termid":{"MONDO:0014855":null,"MONDO:0034106":null,"MONDO:0044319":null},"xrefs":{"Monarch":{"xref_id":"0015653"}}}


id: PBO:0049356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 14","termid":"PBO:0049356"}


id: PBO:0086245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may be involved in pH regulation; probable ortholog of A. nidulans PalC, which is involved in pH regulation and binds to the ESCRT-III complex; null mutant does not properly process Rim101p and has decreased resistance to rapamycin; GFP-fusion protein is cytoplasmic; relative distribution to cytoplasm increases upon DNA replication stress","termid":"PBO:0086245"}


id: PBO:0052366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 14","termid":"PBO:0052366"}


id: GO:0042611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of an MHC alpha chain and, in most cases, either an MHC class II beta chain or an invariant beta2-microglobin chain, and with or without a bound peptide, lipid, or polysaccharide antigen.","definition_xrefs":["GOC:jl","PMID:15928678","GOC:add","PMID:16153240","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"MHC protein complex","termid":"GO:0042611"}


id: FYPO:0007334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at centromere outer repeat regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere outer repeat","termid":"FYPO:0002346"},{"relation_name":"is_a","term_name":"abolished chromatin silencing","termid":"FYPO:0007333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished chromatin silencing at centromere outer repeat","synonyms":[{"name":"abolished chromatin silencing at centromere otr","type":"exact"},{"name":"abolished chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"abolished chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"abolished chromatin silencing at pericentric region","type":"related"},{"name":"abolished chromatin silencing at pericentromeric region","type":"related"},{"name":"abolished heterochromatin silencing at centromere outer repeat region","type":"exact"},{"name":"chromatin silencing at centromere outer repeat abolished","type":"exact"}],"termid":"FYPO:0007334"}


id: PBO:0039672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 4 subunit epsilon 1","termid":"PBO:0039672"}


id: GO:0008480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sarcosine + H2O + electron-transfer flavoprotein = glycine + formaldehyde + reduced electron-transfer flavoprotein.","definition_xrefs":["EC:1.5.8.3","RHEA:19793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sarcosine dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-6797913","MetaCyc:SARCOSINE-DEHYDROGENASE-RXN","KEGG_REACTION:R00611"],"synonyms":[{"name":"monomethylglycine dehydrogenase activity","type":"related"},{"name":"sarcosine N-demethylase activity","type":"related"},{"name":"sarcosine:(acceptor) oxidoreductase (demethylating)","type":"related"},{"name":"sarcosine:acceptor oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0008480"}


id: PBO:0082103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA ATPase with protein-unfoldase activity; subunit of polyUb-selective segregase complex involved in ERAD, INM-associated degradation (INMAD), mitotic spindle disassembly, macroautophagy, PMN, ribosome-associated degradation, ribophagy, homotypic ER membrane fusion, SCF complex disassembly, cell wall integrity, and telomerase regulation; mobilizes membrane-anchored transcription factors by regulated Ub/proteasome-dependent processing (RUP); human ortholog VCP complements a cdc48 mutant","termid":"PBO:0082103"}


id: PBO:0029497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_normal_unseptated_germ_tube_morphology_(obsolete_FYPO:0002218)","termid":"PBO:0029497"}


id: PBO:0063241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 6","termid":"PBO:0063241"}


id: GO:0021673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 7. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:curators","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 7 morphogenesis","termid":"GO:0021671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 formation","termid":"GO:0021673"}


id: GO:0043160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the acrosome membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"is_a","term_name":"lysosomal lumen","termid":"GO:0043202"},{"relation_name":"part_of","term_name":"acrosomal vesicle","termid":"GO:0001669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"acrosomal lumen","termid":"GO:0043160"}


id: FYPO:0008044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, elongated, has no septum, and contains more than four nucleus. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PMID:10545452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002051"},{"relation_name":"is_a","term_name":"elongated vegetative cell with more than four nuclei","termid":"FYPO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000032","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"swollen elongated multinucleate aseptate vegetative cell with more than four nuclei","termid":"FYPO:0008044"}


id: MONDO:0015671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diphtheria (obsolete MONDO:0015671)","termid":"MONDO:0015671","xrefs":{"Monarch":{"xref_id":"0015671"}}}


id: MONDO:0013415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 17p deletion","termid":"MONDO:0022754"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17p13.1 deletion syndrome","secondary_identifiers":["OMIM:613776","UMLS:C3151069","DOID:0060402","MEDGEN:462419"],"synonyms":[{"name":"17p13.1 deletion syndrome","type":"related"},{"name":"chromosome 17p13.1 deletion syndrome","type":"exact"}],"termid":"MONDO:0013415","xrefs":{"Monarch":{"xref_id":"0013415"}}}


id: GO:0044298
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane of a cell that bears surface projections such as axons, dendrites, cilia, or flagella, excluding the plasma membrane on cell projections.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"cell body","termid":"GO:0044297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cell body membrane","synonyms":[{"name":"cell soma membrane","type":"exact"}],"termid":"GO:0044298"}


id: PBO:0005427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Rgf3","termid":"PBO:0005427"}


id: PR:O94473
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.04 gene.","definition_xrefs":["UniProtKB:O94473","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C1919.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.04","synonyms":[{"name":"Spom972h-SPCC1919.04","type":"exact"}],"termid":"PR:O94473"}


id: PBO:0067192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 254, pseudogene","termid":"PBO:0067192"}


id: PBO:0044515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CZIB divergent transcript","termid":"PBO:0044515"}


id: GO:0141148
data:
  {"annotated_genes":["SJAG_02007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94513],"is_not":false,"summary":null,"term":"GO:0141148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2,3-saturated acyl-[ACP] + NADP+ = a (2E)-enoyl-[ACP] + H+ + NADPH.","definition_xrefs":["RHEA:22564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enoyl-[acyl-carrier-protein] reductase activity (NAD(P)H)","termid":"GO:0016631"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.3.1.104","MetaCyc:ENOYL-ACP-REDUCT-NADPH-RXN"],"termid":"GO:0141148","terms_by_termid":{"GO:0141148":null}}


id: PBO:0029718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_processing","termid":"PBO:0029718"}


id: MONDO:0014830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited bleeding disorder, platelet-type in which the cause of the disease is a mutation in the SLFN14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 20","secondary_identifiers":["GARD:18491","Orphanet:466806","UMLS:C4310797","DOID:0111055","MEDGEN:934764","OMIM:616913"],"synonyms":[{"name":"BDPLT20","type":"exact"},{"name":"SLFN14 inherited bleeding disorder, platelet-type","type":"exact"},{"name":"autosomal dominant thrombocytopenia with platelet secretion defect","type":"exact"},{"name":"bleeding disorder, platelet-type, 20","type":"exact"},{"name":"inherited bleeding disorder, platelet-type caused by mutation in SLFN14","type":"exact"}],"termid":"MONDO:0014830","xrefs":{"Monarch":{"xref_id":"0014830"}}}


id: PATO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality inhering in a female by virtue of the bearer's disposition to initiate, sustain, or support reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female fertility","termid":"PATO:0000277"}


id: GO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings.","definition_xrefs":["GOC:mtg_cardio","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by chemical signal","termid":"GO:0003099"},{"relation_name":"part_of","term_name":"positive regulation of blood pressure by epinephrine-norepinephrine","termid":"GO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by epinephrine-norepinephrine","synonyms":[{"name":"increased force of heart contraction by adrenaline-noradrenaline","type":"exact"},{"name":"increased force of heart contraction by epinephrine-norepinephrine","type":"exact"},{"name":"increased inotropy by epinephrine-norepinephrine","type":"related"},{"name":"increased strength of cardiac contraction by epinephrine-norepinephrine","type":"exact"},{"name":"positive regulation of heart contraction by adrenaline-noradrenaline","type":"related"},{"name":"positive regulation of heart contraction by epinephrine-norepinephrine","type":"related"}],"termid":"GO:0001997"}


id: GO:0045312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"nor-spermidine metabolic process","termid":"GO:0046204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nor-spermidine biosynthetic process","synonyms":[{"name":"nor-spermidine anabolism","type":"exact"},{"name":"nor-spermidine biosynthesis","type":"exact"},{"name":"nor-spermidine formation","type":"exact"},{"name":"nor-spermidine synthesis","type":"exact"}],"termid":"GO:0045312"}


id: PBO:0083674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endo-polygalacturonase; pectolytic enzyme that hydrolyzes the alpha-1,4-glycosidic bonds in the rhamnogalacturonan chains in pectins","termid":"PBO:0083674"}


id: PR:000045541
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 1 (Schizosaccharomyces pombe) that has been phosphorylated on a Thr residue (Thr-167) within the T-Loop, and Tyr-15 within the ATP binding region. UniProtKB:P04551, Tyr-15, MOD:00048|Thr-167, MOD:00047.","definition_xrefs":["PMID:26131711","PomBase:MAH","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc2/Phos(Y15,T167)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"Cdc2 phosphorylated 2","type":"related"},{"name":"Cdc2-He","type":"exact"},{"name":"PomBase_original_PRO_term_name: cyclin-dependent kinase 1 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc2/Phos:2","type":"exact"},{"name":"UniProtKB:P04551, Thr-167, MOD:00047|Tyr-15, MOD:00048","type":"exact"},{"name":"cdc2/Phos(Y15,T167)","type":"exact"}],"termid":"PR:000045541"}


id: GO:0010841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, or extent of the wakeful phase of the circadian sleep/wake cycle. The wakeful phase is the part of the circadian sleep/wake cycle where the organism is not asleep.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, wakefulness","termid":"GO:0010840"},{"relation_name":"is_a","term_name":"positive regulation of circadian rhythm","termid":"GO:0042753"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"positively_regulates","term_name":"circadian sleep/wake cycle, wakefulness","termid":"GO:0042746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circadian sleep/wake cycle, wakefulness","termid":"GO:0010841"}


id: GO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows zygotene during prophase I of meiosis, and during which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007128"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007128"],"is_obsolete":false,"name":"pachytene","secondary_identifiers":["Wikipedia:Meiosis#Pachytene","Wikipedia:Pachytene"],"termid":"GO:0000239"}


id: PBO:0078616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 65","termid":"PBO:0078616"}


id: GO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:mgi_curators","PMID:10626665","PMID:10695728","PMID:12580336","PMID:9893949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in inflammatory response","termid":"GO:0002269"},{"relation_name":"is_a","term_name":"macrophage activation","termid":"GO:0042116"},{"relation_name":"is_a","term_name":"glial cell activation","termid":"GO:0061900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell activation","termid":"GO:0001774"}


id: GO:0018664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + H+ + NADPH + O2 = 4-hydroxybenzoate + H2O + NADP+.","definition_xrefs":["RHEA:18033","EC:1.14.14.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"benzoate 4-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R01295","MetaCyc:BENZOATE-4-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0623"],"synonyms":[{"name":"4-hydroxybenzoic hydroxylase activity","type":"exact"},{"name":"benzoate 4-hydroxylase activity","type":"related"},{"name":"benzoate,NADPH:oxygen oxidoreductase (4-hydroxylating)","type":"related"},{"name":"benzoate-p-hydroxylase activity","type":"related"},{"name":"benzoate-para-hydroxylase activity","type":"related"},{"name":"benzoic 4-hydroxylase activity","type":"related"},{"name":"benzoic acid 4-hydroxylase activity","type":"related"},{"name":"p-hydroxybenzoate hydroxylase activity","type":"related"}],"termid":"GO:0018664"}


id: PBO:0017732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC family iron transmembrane transporter Atm1","termid":"PBO:0017732"}


id: PBO:0031664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_modification_during_vegetative_growth","termid":"PBO:0031664"}


id: GO:1900741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"}


id: PBO:0070559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 25","termid":"PBO:0070559"}


id: PR:O13690
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syt22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH and SEC7 domain-containing protein C11E3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.11c","synonyms":[{"name":"Spom972h-syt22","type":"exact"}],"termid":"PR:O13690"}


id: GO:1990589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex consisting of ATF4 and CREB1 subunits that is capable of binding to cAMP response element (CRE) (consensus: 5'-GTGACGT[AC][AG]-3') as part of the positive regulation of transcription. Regulatory targets include the GRP78 (HSPA5) promoter in humans, whose activation by this complex is part of the ER stress response pathway.","definition_xrefs":["GOC:bhm","PMID:12871976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"ATF4-CREB1 transcription factor complex","termid":"GO:1990589"}


id: FYPO:0006268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in regions containing protein-coding genes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at protein coding gene during vegetative growth","termid":"FYPO:0003102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at protein coding gene during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 dimethylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at protein coding gene during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0006268"}


id: PBO:0039091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine--glyoxylate aminotransferase 2","termid":"PBO:0039091"}


id: GO:0046948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"hydroxylysine metabolic process","termid":"GO:0046946"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"hydroxylysine catabolic process","synonyms":[{"name":"hydroxylysine breakdown","type":"exact"},{"name":"hydroxylysine catabolism","type":"exact"},{"name":"hydroxylysine degradation","type":"exact"}],"termid":"GO:0046948"}


id: MONDO:0011403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any left ventricular noncompaction in which the cause of the disease is a mutation in the DTNA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 1","secondary_identifiers":["OMIM:604169","UMLS:C1858725","MEDGEN:349005"],"synonyms":[{"name":"DTNA left ventricular noncompaction","type":"exact"},{"name":"LVNC1","type":"related"},{"name":"left ventricular noncompaction 1","type":"exact"},{"name":"left ventricular noncompaction 1 with or without congenital heart defects","type":"related"},{"name":"left ventricular noncompaction 1, with or without congenital heart defects","type":"exact"},{"name":"left ventricular noncompaction caused by mutation in DTNA","type":"exact"},{"name":"left ventricular noncompaction type 1","type":"exact"}],"termid":"MONDO:0011403","xrefs":{"Monarch":{"xref_id":"0011403"}}}


id: GO:0033794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl phosphate + methylamine + thioredoxin disulfide = N-methylglycine + phosphate + thioredoxin.","definition_xrefs":["EC:1.21.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor","termid":"GO:0050485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sarcosine reductase activity","secondary_identifiers":["RHEA:12825"],"synonyms":[{"name":"acetyl-phosphate methylamine:thioredoxin disulfide oxidoreductase (N-methylglycine-forming) activity","type":"related"}],"termid":"GO:0033794"}


id: PBO:0034789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase Msp1","termid":"PBO:0034789"}


id: GO:0090172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins that contributes to chromosomal pairing and precedes synapsis.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule cytoskeleton organization involved in homologous chromosome segregation (obsolete GO:0090172)","synonyms":[{"name":"microtubule cytoskeleton organisation involved in homologous chromosome segregation","type":"exact"},{"name":"microtubule organization involved in chromosome pairing","type":"exact"}],"termid":"GO:0090172"}


id: GO:0032714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-5 production","termid":"GO:0032674"},{"relation_name":"negatively_regulates","term_name":"interleukin-5 production","termid":"GO:0032634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-5 production","secondary_identifiers":["GO:2000663","GO:0045406"],"synonyms":[{"name":"down regulation of interleukin-5 production","type":"exact"},{"name":"down-regulation of interleukin-5 production","type":"exact"},{"name":"downregulation of interleukin-5 production","type":"exact"},{"name":"inhibition of interleukin-5 production","type":"narrow"},{"name":"negative regulation of IL-5 production","type":"exact"},{"name":"negative regulation of interleukin-5 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-5 secretion","type":"narrow"}],"termid":"GO:0032714"}


id: GO:2001223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuron migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of neuron migration","termid":"GO:2001222"},{"relation_name":"negatively_regulates","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron migration","synonyms":[{"name":"negative regulation of neuron chemotaxis","type":"exact"},{"name":"negative regulation of neuron guidance","type":"related"},{"name":"negative regulation of neuronal migration","type":"exact"}],"termid":"GO:2001223"}


id: GO:0140512
data:
  {"annotated_genes":["SJAG_04148","SJAG_03200","SJAG_01584","SJAG_03729","SJAG_04578","SJAG_01374","SJAG_04284","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89635,115857],"is_not":false,"summary":null,"term":"GO:0140512"},{"annotations":[109909,115858,95623,115481,89636,90454,90841,109875],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140599"}]},"cv_name":"cellular_component","definition":"The central region of a mitotic nuclear bridge, distal to the main portions of the daughter nuclei.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic nuclear bridge","termid":"GO:0140510"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01374":null,"SJAG_01584":null,"SJAG_01745":null,"SJAG_03200":null,"SJAG_03729":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mitotic nuclear bridge midzone","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140512","terms_by_termid":{"GO:0140512":null,"GO:0140599":null}}


id: PBO:0036521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein L-glutamate O-methyltransferase, implicated in DNA damage response","termid":"PBO:0036521"}


id: MONDO:0019293
data:
  {"annotated_genes":["SJAG_00364"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013806"}]},"cv_name":"mondo","definition":"A disease that involves the superficial vasculature.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic dermis disorder (obsolete MONDO:0019291)","termid":"MONDO:0019291"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00364":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin vascular disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C35254","Orphanet:79379","SCTID:11263005","MEDGEN:102473","UMLS:C0162819","DOID:9540","MedDRA:10062171","MESH:D017445","ICD9:709.1"],"synonyms":[{"name":"disorder of blood vessels affecting skin","type":"related"},{"name":"skin vascular disorder","type":"exact"},{"name":"superficial vasculature disease","type":"exact"},{"name":"vascular disease of the skin","type":"exact"},{"name":"vascular disorder of skin","type":"related"},{"name":"vascular disorders of skin","type":"related"},{"name":"vascular skin disease","type":"exact"},{"name":"vasculature skin disease","type":"exact"}],"termid":"MONDO:0019293","terms_by_termid":{"MONDO:0013806":null},"xrefs":{"Monarch":{"xref_id":"0019293"}}}


id: GO:0003923
data:
  {"annotated_genes":["SJAG_03292","SJAG_03672"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86957,113383],"is_not":false,"summary":null,"term":"GO:0003923"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor.","definition_xrefs":["ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"},{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03292":null,"SJAG_03672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0016740","GO:0016769","GO:0016787","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"GPI-anchor transamidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162836"],"termid":"GO:0003923","terms_by_termid":{"GO:0003923":null}}


id: PBO:0003361
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.1","termid":"PBO:0003361"}


id: MONDO:0013134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any open-angle glaucoma in which the cause of the disease is a mutation in the NTF4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"open-angle glaucoma","termid":"MONDO:0005338"},{"relation_name":"is_a","term_name":"hereditary glaucoma","termid":"MONDO:0018174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 1, open angle, O","secondary_identifiers":["UMLS:C2751294","MEDGEN:416515","MESH:C567753","OMIM:613100"],"synonyms":[{"name":"GLC1O","type":"related"},{"name":"NTF4 open-angle glaucoma","type":"exact"},{"name":"glaucoma 1, open angle, 1O","type":"exact"},{"name":"glaucoma 1, open angle, O","type":"exact"},{"name":"glaucoma 1, open angle, type O","type":"exact"},{"name":"open-angle glaucoma caused by mutation in NTF4","type":"exact"}],"termid":"MONDO:0013134","xrefs":{"Monarch":{"xref_id":"0013134"}}}


id: GO:0009143
data:
  {"annotated_genes":["SJAG_03797","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009204"},{"annotations":[98490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[98492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03797":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside triphosphate breakdown","type":"exact"},{"name":"nucleoside triphosphate catabolism","type":"exact"},{"name":"nucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009143","terms_by_termid":{"GO:0009204":null,"GO:0035863":null,"GO:0046081":null}}


id: MONDO:0016026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infantile epilepsy syndrome characterized by early-onset progressive encephalopathy with migrant, continuous myoclonus. Three cases have been reported. The focal continuous myoclonus appeared during the first months of life. Prolonged bilateral myoclonic seizures and generalized tonic-clonic seizures occurred later. Subsequently, a progressive encephalopathy with hypotonia and ataxia appeared. Cortical atrophy was revealed by computed tomography (CT) scan and magnetic resonance imaging (MRI). The etiology is unknown.","definition_xrefs":["Orphanet:1943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"infant epilepsy with migrant focal crisis","secondary_identifiers":["MEDGEN:1390817","GARD:2995","UMLS:C4510564","SCTID:724274009"],"termid":"MONDO:0016026","xrefs":{"Monarch":{"xref_id":"0016026"}}}


id: MONDO:0013552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the AP4S1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 52","secondary_identifiers":["OMIM:614067","UMLS:C3279743","NORD:1991","GARD:15750","DOID:0110804","MEDGEN:481373"],"synonyms":[{"name":"AP4S1 hereditary spastic paraplegia","type":"exact"},{"name":"CPSQ6","type":"exact"},{"name":"SPG52","type":"exact"},{"name":"Spastic Paraplegia 52","type":"exact"},{"name":"autosomal recessive spastic paraplegia 52","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, 6","type":"related"},{"name":"cerebral palsy, spastic quadriplegic, 6, formerly","type":"related"},{"name":"hereditary spastic paraplegia 52","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in AP4S1","type":"exact"},{"name":"hereditary spastic paraplegia type 52","type":"exact"},{"name":"spastic paraplegia 52, autosomal recessive","type":"related"},{"name":"spastic quadriplegic cerebral palsy 6","type":"exact"}],"termid":"MONDO:0013552","xrefs":{"Monarch":{"xref_id":"0013552"}}}


id: GO:0097422
data:
  {"annotated_genes":["SJAG_01309"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74250],"is_not":false,"summary":null,"term":"GO:0097422"}]},"cv_name":"cellular_component","definition":"A network of fine tubules in the vicinity of the Golgi complex and around the centriole.","definition_xrefs":["NIF_Subcellular:sao1570660411","NIF_Subcellular:sao694815499","PMID:11896161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"tubular endosome","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"coated tip","type":"related"}],"termid":"GO:0097422","terms_by_termid":{"GO:0097422":null}}


id: GO:0046712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"GDP metabolic process","termid":"GO:0046710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GDP catabolic process","synonyms":[{"name":"GDP breakdown","type":"exact"},{"name":"GDP catabolism","type":"exact"},{"name":"GDP degradation","type":"exact"}],"termid":"GO:0046712"}


id: GO:0090386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell and contributes to apoptotic cell clearance. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagosome maturation","termid":"GO:0090382"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"phagosome maturation involved in apoptotic cell clearance","termid":"GO:0090386"}


id: GO:0110100
data:
  {"annotated_genes":["SJAG_00773","SJAG_00794","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140456"},{"annotations":[75224,94274,94811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000073"}]},"cv_name":"biological_process","definition":"The release of duplicated spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane. Duplicated SPBs are connected by a bridge structure that is severed in order to release the SPBs from one another. Following liberation, SPBs diffuse through the nuclear membrane until they are across from each other. SPB separation must take place in order for a bipolar spindle to assemble.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"spindle pole body organization","termid":"GO:0051300"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"spindle pole body separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0110100","terms_by_termid":{"GO:0000073":null,"GO:0140456":null}}


id: PBO:0030071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_valine_import","termid":"PBO:0030071"}


id: GO:0008361
data:
  {"annotated_genes":["SJAG_02532","SJAG_03401","SJAG_04332","SJAG_02019","SJAG_03602","SJAG_04668","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94050,97937],"is_not":false,"summary":null,"term":"GO:0008361"},{"annotations":[113364,95185,105166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006884"},{"annotations":[91912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"},{"annotations":[93302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045793"},{"annotations":[97938],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"Any process that modulates the size of a cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01805":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_03401":null,"SJAG_03602":null,"SJAG_04332":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell size","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell size control","type":"exact"}],"termid":"GO:0008361","terms_by_termid":{"GO:0006884":null,"GO:0008361":null,"GO:0009992":null,"GO:0045793":null,"GO:0061387":null}}


id: PBO:0040088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase family member H","termid":"PBO:0040088"}


id: GO:0045726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin biosynthetic process","synonyms":[{"name":"activation of integrin biosynthetic process","type":"narrow"},{"name":"positive regulation of integrin anabolism","type":"exact"},{"name":"positive regulation of integrin biosynthesis","type":"exact"},{"name":"positive regulation of integrin formation","type":"exact"},{"name":"positive regulation of integrin synthesis","type":"exact"},{"name":"stimulation of integrin biosynthetic process","type":"narrow"},{"name":"up regulation of integrin biosynthetic process","type":"exact"},{"name":"up-regulation of integrin biosynthetic process","type":"exact"},{"name":"upregulation of integrin biosynthetic process","type":"exact"}],"termid":"GO:0045726"}


id: GO:0018237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of urease by promoting the incorporation of nickel into the active site.","definition_xrefs":["PMID:16244137","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"urease activator activity","synonyms":[{"name":"urease activase activity","type":"exact"}],"termid":"GO:0018237"}


id: MONDO:0021661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atherosclerosis of the coronary vasculature.","definition_xrefs":["NCIT:C35505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"atherosclerosis","termid":"MONDO:0005311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary atherosclerosis","secondary_identifiers":["UMLS:C0010054","SCTID:443502000","MEDGEN:3623","icd11.foundation:1280712786","ICD9:414.00"],"synonyms":[{"name":"arteriosclerosis disorder of coronary artery","type":"exact"},{"name":"atherosclerosis of coronary artery","type":"broad"},{"name":"coronary artery arteriosclerosis (disease)","type":"exact"},{"name":"coronary artery arteriosclerosis disorder","type":"exact"},{"name":"coronary atherosclerosis","type":"exact"}],"termid":"MONDO:0021661","xrefs":{"Monarch":{"xref_id":"0021661"}}}


id: SO:0001007
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A remnant of an integrated prophage in the host genome or an \\\"island\\\" in the host genome that includes phage like-genes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_prophage","secondary_identifiers":["http://ecoliwiki.net/colipedia/index.php/Category\\:Cryptic_Prophage.w"],"synonyms":[{"name":"cryptic prophage","type":"exact"}],"termid":"SO:0001007"}


id: MONDO:0006677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retrograde bile flow. Reflux of bile can be from the duodenum to the stomach (duodenogastric reflux); to the esophagus (gastroesophageal reflux); or to the pancreas.","definition_xrefs":["MESH:D001655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"bile reflux","secondary_identifiers":["UMLS:C0005403","EFO:1000838","DOID:12237","MEDGEN:2243"],"termid":"MONDO:0006677","xrefs":{"Monarch":{"xref_id":"0006677"}}}


id: PBO:0064431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 8","termid":"PBO:0064431"}


id: MONDO:0800310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"infertility disorder","termid":"MONDO:0005047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"pregnancy loss, recurrent, 4","secondary_identifiers":["MEDGEN:481067","UMLS:C3279437"],"synonyms":[{"name":"RPRGL4","type":"exact"}],"termid":"MONDO:0800310","xrefs":{"Monarch":{"xref_id":"0800310"}}}


id: PBO:0078090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 7","termid":"PBO:0078090"}


id: PR:O13650
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfc9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.07c","synonyms":[{"name":"Spom972h-sfc9","type":"exact"},{"name":"TFIIIC subunit sfc9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13650"}


id: GO:0034698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gonadotropin stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gonadotropin","synonyms":[{"name":"response to gonadotropin stimulus","type":"exact"}],"termid":"GO:0034698"}


id: GO:0048248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR3 chemokine receptor.","definition_xrefs":["PMID:10556837","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CXCR chemokine receptor binding","termid":"GO:0045236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CXCR3 chemokine receptor binding","termid":"GO:0048248"}


id: PBO:0034197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sends_output_to","termid":"PBO:0034197"}


id: PBO:0055401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2831","termid":"PBO:0055401"}


id: MONDO:0023022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism thin bones multiple fractures","termid":"MONDO:0023022","xrefs":{"Monarch":{"xref_id":"0023022"}}}


id: PBO:0040763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain enriched guanylate kinase associated","termid":"PBO:0040763"}


id: GO:0106125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A matrix composed of planar membranes, vesicles and lipid inclusions within the reservosome.","definition_xrefs":["PMID:15521631","PMID:21818313","PMID:12204365","PMID:19288526","GOC:ach","PMID:18452191","PMID:22425988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"reservosome","termid":"GO:0106123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"reservosome matrix","termid":"GO:0106125"}


id: PBO:0089244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm1","termid":"PBO:0089244"}


id: FYPO:0002150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which none of the cells in a population of spores are viable. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell population","termid":"FYPO:0002059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002059"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002059","FYPO:0000003"],"is_obsolete":false,"name":"inviable spore population","synonyms":[{"name":"essential in spore population","type":"related"},{"name":"inviable population of spores","type":"exact"},{"name":"lethal in spore population","type":"exact"}],"termid":"FYPO:0002150"}


id: GO:0019400
data:
  {"annotated_genes":["SJAG_04048","SJAG_04320","SJAG_00409","SJAG_03609","SJAG_04192","SJAG_01012","SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[105968,93481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[115798,92568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[92569,65318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006071"},{"annotations":[88123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[104518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00409":null,"SJAG_01012":null,"SJAG_03609":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"alditol metabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"alditol metabolism","type":"exact"}],"termid":"GO:0019400","terms_by_termid":{"GO:0006062":null,"GO:0006071":null,"GO:0006114":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null}}


id: GO:0010685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracyclic triterpenoid compounds, terpenoids with six isoprene units and 4 carbon rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tetracyclic triterpenoid metabolic process","synonyms":[{"name":"tetracyclic triterpenoid metabolism","type":"exact"}],"termid":"GO:0010685"}


id: PBO:0068331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 38","termid":"PBO:0068331"}


id: FYPO:0005612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nuclear envelope is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nuclear envelope","synonyms":[{"name":"normal protein localisation to nuclear envelope","type":"exact"}],"termid":"FYPO:0005612"}


id: PBO:0076980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T helper type 2 locus control region associated RNA","termid":"PBO:0076980"}


id: FYPO:0000623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which any process of positive regulation of transcription is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abnormal positive regulation of transcription","synonyms":[{"name":"abnormal activation of gene-specific transcription","type":"related"},{"name":"abnormal activation of transcription, DNA-dependent","type":"narrow"},{"name":"abnormal positive regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"abnormal positive regulation of gene-specific transcription","type":"related"},{"name":"abnormal positive regulation of transcription, DNA-dependent","type":"exact"},{"name":"abnormal stimulation of gene-specific transcription","type":"narrow"},{"name":"abnormal stimulation of transcription, DNA-dependent","type":"narrow"},{"name":"abnormal up regulation of gene-specific transcription","type":"related"},{"name":"abnormal up regulation of transcription, DNA-dependent","type":"exact"},{"name":"abnormal up-regulation of gene-specific transcription","type":"related"},{"name":"abnormal up-regulation of transcription, DNA-dependent","type":"exact"},{"name":"abnormal upregulation of gene-specific transcription","type":"related"},{"name":"abnormal upregulation of transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0000623"}


id: PBO:0063752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 17","termid":"PBO:0063752"}


id: FYPO:0004354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during mitotic G1 phase","synonyms":[{"name":"increased protein phosphorylation during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during mitotic G1-phase","type":"exact"},{"name":"increased protein/peptide phosphorylation during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004354"}


id: PBO:0087571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH and nucleotide excision repair factor 3 complexes; required for nucleotide excision repair, target for transcriptional activators; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087571"}


id: MONDO:0024416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Neorickettsia.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease","termid":"MONDO:0006922"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Neorickettsia infectious disease","secondary_identifiers":["UMLS:C0276121","MEDGEN:547099","SCTID:78355003"],"synonyms":[{"name":"Neorickettsia caused disease or disorder","type":"exact"},{"name":"Neorickettsia disease or disorder","type":"exact"},{"name":"neorickettsiosis","type":"exact"}],"termid":"MONDO:0024416","xrefs":{"Monarch":{"xref_id":"0024416"}}}


id: GO:0018914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chlorobenzene, a derivative of benzene with a chlorine atoms attached to the ring. It is a colorless liquid that is manufactured for use as a solvent. It quickly evaporates in the air and is degraded by hydroxyl radicals that are produced photochemically. The gas acts as a source of ClOx, which helps in the breakdown of stratospheric ozone.","definition_xrefs":["PMID:10808489","PMID:8626733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chlorobenzene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:cb"],"synonyms":[{"name":"chlorobenzene metabolic process","type":"broad"},{"name":"chlorobenzene metabolism","type":"broad"}],"termid":"GO:0018914"}


id: PBO:0028644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028644"}


id: PBO:0086519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; overlaps ORF YLR235C","termid":"PBO:0086519"}


id: MOD:01694
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between an L-cysteine residue and the bioluminescent compound didehydrocoelenterazine to form S-(coelenterazin-3a-yl)-L-cysteine.","definition_xrefs":["RESID:AA0526","PubMed:18997450","ChEBI:2311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(coelenterazin-3a-yl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(4-hydroxyphenyl)(8-benzyl-3-oxo-6-[4-hydroxyphenyl]-3,7-dihydroimidazo[1,2-a]pyrazin-2-yl)methyl]sulfanyl)propanoic acid","type":"exact"},{"name":"MOD_RES S-(coelenterazin-3a-yl)cysteine","type":"exact"},{"name":"S-(coelenterazin-3a-yl)-L-cysteine","type":"exact"},{"name":"dehydrocoelenterazine cysteine adduct","type":"exact"},{"name":"symplectin chromophore","type":"exact"}],"termid":"MOD:01694"}


id: PBO:0069548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 819, pseudogene","termid":"PBO:0069548"}


id: MONDO:0008510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Symphalangism with multiple anomalies of hands and feet is an exceedingly rare syndrome described in one family and characterized by proximal symphalangism and multiple hand and feet disorders (syndactyly, clinodactyly, hypoplasia of the thenar and hypothenar eminences, and a distinctive dermatoglyphic pattern). There have been no further descriptions in the literature since 1981.","definition_xrefs":["Orphanet:3246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symphalangism","termid":"MONDO:0000151"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symphalangism with multiple anomalies of hands and feet","secondary_identifiers":["GARD:5077","MEDGEN:348859","MESH:C566098","SCTID:732955001","OMIM:185750","UMLS:C1861391"],"synonyms":[{"name":"Learman syndrome","type":"exact"},{"name":"symphalangism with multiple anomalies of hands and feet","type":"exact"}],"termid":"MONDO:0008510","xrefs":{"Monarch":{"xref_id":"0008510"}}}


id: MONDO:0002647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic, bacterial or viral inflammatory process affecting the larynx. Signs and symptoms include sore throat, cough, swallowing difficulties, and hoarseness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngitis","secondary_identifiers":["NCIT:C26811","DOID:3437","UMLS:C0023067","SCTID:45913009","MEDGEN:7273","ICD9:464.00","MESH:D007827"],"synonyms":[{"name":"inflammation of larynx","type":"exact"},{"name":"laryngeal Inflammation","type":"exact"},{"name":"laryngeal inflammation","type":"exact"},{"name":"larynx inflammation","type":"exact"}],"termid":"MONDO:0002647","xrefs":{"Monarch":{"xref_id":"0002647"}}}


id: PBO:0042792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 170B","termid":"PBO:0042792"}


id: PBO:0040278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antioxidant 1 copper chaperone","termid":"PBO:0040278"}


id: PBO:0048861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 6","termid":"PBO:0048861"}


id: GO:0043215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of daunorubicin, an anthracycline antibiotic produced by Streptomyces coeruleorubidus or S. peucetius and used as an antineoplastic into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"daunorubicin transport","termid":"GO:0043215"}


id: PBO:0000564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"krr family protein (predicted)","termid":"PBO:0000564"}


id: PBO:0075921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 13","termid":"PBO:0075921"}


id: SO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleic acid from which replication initiates; includes sequences that are recognized by replication proteins, the site from which the first separation of complementary strands occurs, and specific replication start sites.","definition_xrefs":["NCBI:cf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin_of_replication","secondary_identifiers":["http://en.wikipedia.org/wiki/Origin_of_replication"],"synonyms":[{"name":"INSDC_feature:rep_origin","type":"exact"},{"name":"ori","type":"exact"},{"name":"origin of replication","type":"exact"}],"termid":"SO:0000296"}


id: GO:0043491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with phosphatidylinositol 3-kinase (PI3K) activation, production of phosphatidylinositol 3-phosphate (PI3P), activation of PDK1, which recruits and ending with the activation of protein kinase B (PKB, also known as Akt). PI3K is activated by cell surface receptors. Note that PTEN is an inhibitor of the pathway.","definition_xrefs":["PMID:22952397","PMID:20517722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase/protein kinase B signal transduction","secondary_identifiers":["Reactome:R-HSA-198203","Reactome:R-HSA-198323","Reactome:R-HSA-198693"],"synonyms":[{"name":"AKT signal transduction","type":"related"},{"name":"AKT signaling","type":"related"},{"name":"AKT signaling cascade","type":"related"},{"name":"AKT signalling cascade","type":"related"},{"name":"PI3K-PKB/Akt pathway","type":"exact"},{"name":"PI3K/Akt signal transduction","type":"exact"},{"name":"PI3K/PKB signal transduction","type":"exact"},{"name":"PKB signal transduction","type":"related"},{"name":"PKB signaling","type":"related"},{"name":"PKB signaling cascade","type":"related"},{"name":"PKB signalling cascade","type":"related"},{"name":"phosphatidylinositol 3-kinase signaling/protein kinase B signal transduction","type":"exact"},{"name":"protein kinase B signal transduction","type":"related"},{"name":"protein kinase B signaling","type":"related"},{"name":"protein kinase B signaling cascade","type":"related"},{"name":"protein kinase B signalling cascade","type":"related"}],"termid":"GO:0043491"}


id: GO:0062157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that is capable of the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.","definition_xrefs":["PMID:31435016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel complex","termid":"GO:0034705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial ATP-gated potassium channel complex","termid":"GO:0062157"}


id: PBO:0087611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex; required for Set1C stability and optimal activity; COMPASS methylates histone H3 on lys 4 and is involved in telomeric silencing; subunit of CPF (cleavage and polyadenylation factor), a complex involved in RNAP II transcription termination","termid":"PBO:0087611"}


id: GO:0051028
data:
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id: PATO:0001093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001093 relative flux value (obsolete PATO:0001093)","termid":"PATO:0001093"}


id: MONDO:0024458
data:
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id: GO:0006808
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  {"annotated_genes":["SJAG_03319","SJAG_04268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88359,113273],"is_not":false,"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nitrogen utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03319":null,"SJAG_04268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitrogen utilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006808","terms_by_termid":{"GO:0006808":null}}


id: MONDO:0024304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common form of ichthyosis. It is an autosomal dominant inherited or acquired disorder characterized by scaling and desquamation of the skin.","definition_xrefs":["NCIT:C84778"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ichthyosis","termid":"MONDO:0019269"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis vulgaris","secondary_identifiers":["icd11.foundation:841161884","MESH:D016112","MEDGEN:38217","UMLS:C0079584","GARD:6752"],"synonyms":[{"name":"common ichthyosis","type":"related"},{"name":"fish scale disease","type":"related"},{"name":"ichthyosis vulgaris","type":"exact"}],"termid":"MONDO:0024304","xrefs":{"Monarch":{"xref_id":"0024304"}}}


id: PBO:0109838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase core complex-Piccolo HAT module linker protein Epl1","termid":"PBO:0109838"}


id: PBO:0064907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 catalytic subunit","termid":"PBO:0064907"}


id: PR:P87120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease P protein subunit p30 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00574","PANTHER:PTHR13031:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P protein subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.04c","secondary_identifiers":["UniProtKB:P87120"],"synonyms":[{"name":"Spom972h-RPP30","type":"exact"}],"termid":"PR:P87120"}


id: PBO:0110978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD36 molecule (CD36 blood group)","termid":"PBO:0110978"}


id: GO:0047366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin 3-sulfate = adenosine 3',5'-diphosphate + H+ + quercetin 3,4'-disulfate.","definition_xrefs":["RHEA:17205","EC:2.8.2.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"quercetin-3-sulfate 4'-sulfotransferase activity","secondary_identifiers":["MetaCyc:2.8.2.27-RXN","KEGG_REACTION:R02633"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3-sulfate 4'-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3-sulfate 4'-sulfotransferase activity","type":"related"},{"name":"flavonol 4'-sulfotransferase activity","type":"related"},{"name":"quercetin-3-sulphate 4'-sulphotransferase activity","type":"exact"}],"termid":"GO:0047366"}


id: MONDO:0008557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paris-Trousseau thrombocytopenia (TCPT) is a contiguous gene syndrome characterized by mild bleeding tendency, variable thrombocytopenia (THC), dysmorphic facies, abnormal giant alpha-granules in platelets and dysmegakaryopoiesis.","definition_xrefs":["Orphanet:851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 11","termid":"MONDO:0016910"},{"relation_name":"is_a","term_name":"alpha granule disease","termid":"MONDO:0020117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Paris-Trousseau thrombocytopenia","secondary_identifiers":["GARD:4224","MEDGEN:365037","UMLS:C1956093","icd11.foundation:1441183910","OMIM:188025"],"synonyms":[{"name":"Paris-Trousseau syndrome","type":"related"},{"name":"TCPT","type":"related"},{"name":"chromosome 11q23 deletion syndrome","type":"related"},{"name":"thrombocytopenia Paris-Trousseau type","type":"related"},{"name":"thrombocytopenia, Paris-TROUSSEAU type","type":"related"},{"name":"thrombocytopenia, Paris-Trousseau type, Isolated cases","type":"exact"}],"termid":"MONDO:0008557","xrefs":{"Monarch":{"xref_id":"0008557"}}}


id: MONDO:0003316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumor of the kidney characterized by the absence of nuclear anaplasia.","definition_xrefs":["NCIT:C6951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney Wilms tumor","termid":"MONDO:0019004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"nonanaplastic kidney Wilms tumor","secondary_identifiers":["MEDGEN:277434","UMLS:C1335062"],"synonyms":[{"name":"nonanaplastic kidney Wilms tumor","type":"exact"},{"name":"nonanaplastic renal Wilm's tumor","type":"exact"},{"name":"nonanaplastic renal Wilm's tumour","type":"exact"},{"name":"nonanaplastic renal Wilms tumor","type":"exact"},{"name":"nonanaplastic renal Wilms tumour","type":"exact"},{"name":"nonanaplastic renal Wilms' tumor","type":"exact"},{"name":"nonanaplastic renal Wilms' tumour","type":"exact"}],"termid":"MONDO:0003316","xrefs":{"Monarch":{"xref_id":"0003316"}}}


id: MONDO:1010916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myopathy that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"myopathy, non-human animal","termid":"MONDO:1010195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy, chicken","secondary_identifiers":["OMIA:000693-9031"],"termid":"MONDO:1010916","xrefs":{"Monarch":{"xref_id":"1010916"}}}


id: MONDO:0018679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"primary cutaneous plasmacytosis","secondary_identifiers":["UMLS:C4736227","Orphanet:451602","GARD:21888","icd11.foundation:1669369613","MEDGEN:1672491"],"termid":"MONDO:0018679","xrefs":{"Monarch":{"xref_id":"0018679"}}}


id: GO:0008930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methylthioadenosine + H2O = adenine + 5-methylthio-D-ribose.","definition_xrefs":["EC:3.2.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleosidase activity","termid":"GO:0008477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"methylthioadenosine nucleosidase activity","secondary_identifiers":["MetaCyc:METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN","RHEA:13617"],"synonyms":[{"name":"5'-methylthioadenosine nucleosidase activity","type":"related"},{"name":"MTA nucleosidase activity","type":"related"},{"name":"MeSAdo nucleosidase activity","type":"related"},{"name":"S-methyl-5'-thioadenosine adeninehyrolase activity","type":"related"},{"name":"methylthioadenosine methylthioribohydrolase activity","type":"related"}],"termid":"GO:0008930"}


id: RO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite-of relationship in which the host is a plant and the parasite that attaches to the host root (PO:0009005)","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"root_parasite_of","termid":"RO:0002236"}


id: PBO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.29","termid":"PBO:0000752"}


id: PBO:0058142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4438","termid":"PBO:0058142"}


id: PBO:0056639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 14 pseudogene 1","termid":"PBO:0056639"}


id: MONDO:0700228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any exudative vitreoretinopathy with or without osteoporosis caused by variants in the LRP5 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"exudative vitreoretinopathy","termid":"MONDO:0019516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"LRP5-related exudative vitreoretinopathy","synonyms":[{"name":"LRP5-related exudative vitreoretinopathy with or without osteoporosis","type":"exact"}],"termid":"MONDO:0700228","xrefs":{"Monarch":{"xref_id":"0700228"}}}


id: GO:0050102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-beta-D-glucosyl(n) + phosphate = 1,4-beta-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate.","definition_xrefs":["MetaCyc:CELLODEXTRIN-PHOSPHORYLASE-RXN","EC:2.4.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cellodextrin phosphorylase activity","secondary_identifiers":["RHEA:23024"],"synonyms":[{"name":"1,4-beta-D-oligo-D-glucan:phosphate alpha-D-glucosyltransferase activity","type":"related"},{"name":"beta-1,4-oligoglucan:orthophosphate glucosyltransferase activity","type":"related"}],"termid":"GO:0050102"}


id: PBO:0069420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 682, pseudogene","termid":"PBO:0069420"}


id: FYPO:0005731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arginase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal arginase activity","termid":"FYPO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased arginase activity","synonyms":[{"name":"reduced arginase activity","type":"exact"}],"termid":"FYPO:0005731"}


id: GO:1990357
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An actin-rich cytoskeletal network located beneath the microvilli of the apical plasma membrane of polarized epithelial cells. In addition to actin filaments, the terminal web may contain actin-binding proteins, myosin motor proteins, and intermediate filaments. The terminal web can function as a contractile structure that influences the spatial distribution of microvilli as well as the development and morphogenesis of tissues containing polarized epithelial cells.","definition_xrefs":["Wikipedia:Terminal_web","GOC:kmv","PMID:19437512","PMID:24677443","PMID:7511618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0015629","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"terminal web","termid":"GO:1990357"}


id: GO:1900945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of isoprene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of isoprene metabolic process","termid":"GO:1900944"},{"relation_name":"negatively_regulates","term_name":"isoprene metabolic process","termid":"GO:0043611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isoprene metabolic process","synonyms":[{"name":"down regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"down regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"down regulation of hemiterpene metabolic process","type":"exact"},{"name":"down regulation of hemiterpene metabolism","type":"exact"},{"name":"down regulation of isoprene metabolic process","type":"exact"},{"name":"down regulation of isoprene metabolism","type":"exact"},{"name":"down-regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"down-regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"down-regulation of hemiterpene metabolic process","type":"exact"},{"name":"down-regulation of hemiterpene metabolism","type":"exact"},{"name":"down-regulation of isoprene metabolic process","type":"exact"},{"name":"down-regulation of isoprene metabolism","type":"exact"},{"name":"downregulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"downregulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"downregulation of hemiterpene metabolic process","type":"exact"},{"name":"downregulation of hemiterpene metabolism","type":"exact"},{"name":"downregulation of isoprene metabolic process","type":"exact"},{"name":"downregulation of isoprene metabolism","type":"exact"},{"name":"inhibition of 2-methyl-1,3-butadiene metabolic process","type":"narrow"},{"name":"inhibition of 2-methyl-1,3-butadiene metabolism","type":"narrow"},{"name":"inhibition of hemiterpene metabolic process","type":"narrow"},{"name":"inhibition of hemiterpene metabolism","type":"narrow"},{"name":"inhibition of isoprene metabolic process","type":"narrow"},{"name":"inhibition of isoprene metabolism","type":"narrow"},{"name":"negative regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"negative regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"negative regulation of hemiterpene metabolic process","type":"exact"},{"name":"negative regulation of hemiterpene metabolism","type":"exact"},{"name":"negative regulation of isoprene metabolism","type":"exact"}],"termid":"GO:1900945"}


id: GO:0006491
data:
  {"annotated_genes":["SJAG_03280","SJAG_03535","SJAG_04571"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86896,113203,117952],"is_not":false,"summary":null,"term":"GO:0006491"}]},"cv_name":"biological_process","definition":"The conversion of N-linked glycan (N = nitrogen) structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking.","definition_xrefs":["PMID:12736198","ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03280":null,"SJAG_03535":null,"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-glycan processing","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006492"],"synonyms":[{"name":"N-linked glycoprotein maturation","type":"exact"},{"name":"glycoprotein trimming involved in glycoprotein maturation","type":"narrow"}],"termid":"GO:0006491","terms_by_termid":{"GO:0006491":null}}


id: PBO:0079718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 5","termid":"PBO:0079718"}


id: PBO:0067613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 785, pseudogene","termid":"PBO:0067613"}


id: MONDO:0011090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated hereditary congenital facial paralysis (IHCFP) is an extremely rare neurological disorder presumed to result from maldevelopment of the facial nucleus and/or cranial nerve and has been reported in fewer than 10 families to date. It manifests as non-progressive, isolated, unilateral or bilateral, symmetrical or asymmetrical facial palsy. Involvement of the branches of the facial nerve can be unequal.","definition_xrefs":["Orphanet:306527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated hereditary congenital facial paralysis","secondary_identifiers":["MEDGEN:1381843","MESH:C563309","UMLS:C4518577","GARD:8583","OMIMPS:601471","SCTID:733091002"],"synonyms":[{"name":"HCFP","type":"broad"},{"name":"MBS2 (formerly)","type":"related"},{"name":"Mobius syndrome 2 (formerly)","type":"related"},{"name":"Moebius syndrome 2 (formerly)","type":"related"},{"name":"facial palsy, congenital, unilateral or bilateral","type":"related"},{"name":"facial paresis hereditary congenital","type":"related"},{"name":"facial paresis, hereditary congenital","type":"related"},{"name":"hereditary congenital facial paresis","type":"related"}],"termid":"MONDO:0011090","xrefs":{"Monarch":{"xref_id":"0011090"}}}


id: PBO:0087991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase; deaminates adenosine-37 to inosine in tRNA-Ala","termid":"PBO:0087991"}


id: MONDO:0008312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malocclusion in which the mandible is anterior to the maxilla as reflected by the first relationship of the first permanent molar (mesioclusion).","definition_xrefs":["MESH:D008313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant prognathism","secondary_identifiers":["GARD:10319","MEDGEN:98316","UMLS:C0399526","Orphanet:2964","OMIM:176700"],"synonyms":[{"name":"'Habsburg jaw'","type":"related"},{"name":"'Hapsburg jaw'","type":"related"},{"name":"Habsburg jaw","type":"related"},{"name":"Hapsburg jaw","type":"related"},{"name":"prognathism mandibular","type":"related"},{"name":"prognathism, mandibular","type":"related"}],"termid":"MONDO:0008312","xrefs":{"Monarch":{"xref_id":"0008312"}}}


id: MONDO:0003511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular germ cell cancer (obsolete MONDO:0003511)","termid":"MONDO:0003511","xrefs":{"Monarch":{"xref_id":"0003511"}}}


id: GO:1902032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in response to osmotic stress.","definition_xrefs":["PMID:18636113","GOC:kmv","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in response to osmotic stress (obsolete GO:1902032)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in osmotic response","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in osmotic stress response","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in response to osmotic stress","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in osmotic response","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in osmotic stress response","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in response to osmotic stress","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in osmotic response","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in osmotic stress response","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in response to osmotic stress","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in osmotic response","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in osmotic stress response","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in response to osmotic stress","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in osmotic response","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in osmotic stress response","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in response to osmotic stress","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in osmotic response","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in osmotic stress response","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in response to osmotic stress","type":"related"}],"termid":"GO:1902032"}


id: SO:0001484
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An X element combinatorial repeat is a repeat region located between the X element and the telomere or adjacent Y' element.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"telomere","termid":"SO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X_element_combinatorial_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:x_element_combinatorial_repeat","type":"exact"},{"name":"X element combinatorial repeat","type":"exact"}],"termid":"SO:0001484"}


id: GO:0014726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of extraocular skeletal muscle development. Extraocular skeletal muscle development is the process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extraocular skeletal muscle development","termid":"GO:0014725"},{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle tissue development","termid":"GO:0048642"},{"relation_name":"negatively_regulates","term_name":"extraocular skeletal muscle development","termid":"GO:0002074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extraocular skeletal muscle development","termid":"GO:0014726"}


id: PBO:0026684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_density_in_stationary_phase","termid":"PBO:0026684"}


id: GO:0018297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via 1'-(8-alpha-FAD)-L-histidine.","definition_xrefs":["RESID:AA0221"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via 1'-(8alpha-FAD)-L-histidine (obsolete GO:0018297)","termid":"GO:0018297"}


id: PBO:0075320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 2","termid":"PBO:0075320"}


id: GO:0038031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, where the signal is passed on via the JNK cascade.","definition_xrefs":["PMID:19137009","PMID:20032469","GOC:BHF","GPC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:0038031)","synonyms":[{"name":"non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway via JNK cascade","type":"exact"}],"termid":"GO:0038031"}


id: MONDO:0850812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary immunodeficiency disease characterized by impaired function or reduced numbers of dendritic cells.","definition_xrefs":["DOID:0111963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"dendritic cell deficiency","secondary_identifiers":["UMLS:C4746814","MEDGEN:1656300"],"termid":"MONDO:0850812","xrefs":{"Monarch":{"xref_id":"0850812"}}}


id: PBO:0055462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2895","termid":"PBO:0055462"}


id: PBO:0053310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-52 DREAM MuvB core complex component","termid":"PBO:0053310"}


id: MONDO:0030270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 9","secondary_identifiers":["UMLS:C5543365","MEDGEN:1779656","OMIM:619319"],"synonyms":[{"name":"LMPHM9","type":"exact"},{"name":"lymphatic malformation 9","type":"exact"}],"termid":"MONDO:0030270","xrefs":{"Monarch":{"xref_id":"0030270"}}}


id: GO:1903245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of adrenergic receptor signaling pathway involved in positive regulation of heart rate.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","GOC:rl","PMID:17242280","GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:1903245)","synonyms":[{"name":"regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:1903245"}


id: PBO:0089224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, Atf-CREB family Atf21","termid":"PBO:0089224"}


id: GO:1900789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pseurotin A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam catabolic process","termid":"GO:0072340"},{"relation_name":"is_a","term_name":"pseurotin A metabolic process","termid":"GO:1900788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pseurotin A catabolic process","synonyms":[{"name":"Pseurotin breakdown","type":"related"},{"name":"Pseurotin catabolic process","type":"related"},{"name":"Pseurotin catabolism","type":"related"},{"name":"Pseurotin degradation","type":"related"},{"name":"pseurotin A breakdown","type":"exact"},{"name":"pseurotin A catabolism","type":"exact"},{"name":"pseurotin A degradation","type":"exact"}],"termid":"GO:1900789"}


id: GO:1905138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral DNA genome packaging via site-specific sequence recognition.","definition_xrefs":["GOC:TermGenie","PMID:24711378","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"is_a","term_name":"regulation of viral DNA genome packaging via site-specific sequence recognition","termid":"GO:1905137"},{"relation_name":"positively_regulates","term_name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral DNA genome packaging via site-specific sequence recognition","synonyms":[{"name":"activation of viral DNA genome packaging via site-specific sequence recognition","type":"narrow"},{"name":"up regulation of viral DNA genome packaging via site-specific sequence recognition","type":"exact"},{"name":"up-regulation of viral DNA genome packaging via site-specific sequence recognition","type":"exact"},{"name":"upregulation of viral DNA genome packaging via site-specific sequence recognition","type":"exact"}],"termid":"GO:1905138"}


id: MONDO:0004772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iridocyclitis","termid":"MONDO:0004773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucomatocyclitic crisis","secondary_identifiers":["MEDGEN:508902","ICD9:364.22","SCTID:29538005","UMLS:C0152138","Orphanet:636950","DOID:9378"],"synonyms":[{"name":"Posner-Schlossman syndrome","type":"exact"},{"name":"Terrien-Viel syndrome","type":"exact"},{"name":"glaucomatocyclitic crisis disease","type":"exact"}],"termid":"MONDO:0004772","xrefs":{"Monarch":{"xref_id":"0004772"}}}


id: GO:0005525
data:
  {"annotated_genes":["SJAG_00801","SJAG_01456","SJAG_01534","SJAG_01391","SJAG_01769","SJAG_04375","SJAG_00983","SJAG_03732","SJAG_00031","SJAG_01774","SJAG_00457","SJAG_01929","SJAG_00226","SJAG_02509","SJAG_04470","SJAG_04509","SJAG_02684","SJAG_01438","SJAG_02656","SJAG_02180","SJAG_04003","SJAG_04366","SJAG_03188","SJAG_03374","SJAG_03688","SJAG_00414","SJAG_05030","SJAG_03684","SJAG_01277","SJAG_02384","SJAG_01449","SJAG_00424","SJAG_04157","SJAG_00968","SJAG_03453","SJAG_01339","SJAG_03846","SJAG_04004","SJAG_03137","SJAG_02604","SJAG_02171","SJAG_02661","SJAG_04233","SJAG_00840","SJAG_02353","SJAG_04874","SJAG_01379","SJAG_01695","SJAG_02520","SJAG_04351","SJAG_01789","SJAG_03371","SJAG_02824","SJAG_00659","SJAG_01358","SJAG_03342","SJAG_04940","SJAG_02444","SJAG_00663","SJAG_00906","SJAG_03461","SJAG_04343","SJAG_01696","SJAG_03072","SJAG_02856","SJAG_02302","SJAG_04387","SJAG_00466","SJAG_02640","SJAG_02233","SJAG_00118","SJAG_03915","SJAG_01851","SJAG_02848","SJAG_01909","SJAG_02366","SJAG_03959","SJAG_02331","SJAG_00344","SJAG_00231","SJAG_04666","SJAG_02601","SJAG_00360","SJAG_03275","SJAG_02595","SJAG_01558","SJAG_02605","SJAG_01215","SJAG_02292","SJAG_04862","SJAG_00430","SJAG_05332","SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60872,87420,88402,88755,88953,89248,89816,90368,90595,90808,91435,91494,91529,91938,92217,92305,92376,92766,92903,92956,93104,93105,93106,93351,93738,93788,93835,94011,94731,95265,95779,96010,96570,97248,97398,97804,97805,97887,99139,99215,99457,99611,100153,100343,100456,100732,100781,100943,101259,102118,102142,102256,102371,102980,103154,103406,103498,104084,104134,104377,104531,104888,105480,106019,106606,106645,106667,106896,106904,107932,108166,108194,108315,108727,108788,109216,109726,109987,109994,109995,110293,110895,110976,111581,111847,111848,111849,112314,112975,115379,115416,115529,116060,116770,116933,116938,116939,117803,117913,117914,117915,118391,118392],"is_not":false,"summary":null,"term":"GO:0005525"}]},"cv_name":"molecular_function","definition":"Binding to GTP, guanosine triphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate binding","termid":"GO:0035639"}],"gene_count":93,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00044":null,"SJAG_00118":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00360":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00801":null,"SJAG_00840":null,"SJAG_00906":null,"SJAG_00968":null,"SJAG_00983":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01534":null,"SJAG_01558":null,"SJAG_01695":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01789":null,"SJAG_01851":null,"SJAG_01909":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02509":null,"SJAG_02520":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02604":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02661":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03188":null,"SJAG_03275":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_03959":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04233":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04366":null,"SJAG_04375":null,"SJAG_04387":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04862":null,"SJAG_04874":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GTP binding","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-167429"],"termid":"GO:0005525","terms_by_termid":{"GO:0005525":null}}


id: MONDO:0018119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of phospholipids, sphingolipids and fatty acids biosynthesis with peripheral nerves predominant involvement (obsolete MONDO:0018119)","secondary_identifiers":["Orphanet:352309"],"termid":"MONDO:0018119","xrefs":{"Monarch":{"xref_id":"0018119"}}}


id: PBO:0003807
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.4.2","termid":"PBO:0003807"}


id: PATO:0000042
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000042 relative distance (obsolete PATO:0000042)","termid":"PATO:0000042"}


id: SO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a small nucleolar RNA of the box H/ACA family.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_snoRNA_primary_transcript","synonyms":[{"name":"H ACA box snoRNA primary transcript","type":"exact"}],"termid":"SO:0000596"}


id: GO:0090042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acetyl group from tubulin. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacetylation","termid":"GO:0006476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tubulin deacetylation","termid":"GO:0090042"}


id: GO:1904100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein O-linked glycosylation.","definition_xrefs":["GOC:TermGenie","PMID:24509081","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein glycosylation","termid":"GO:0060050"},{"relation_name":"is_a","term_name":"regulation of protein O-linked glycosylation","termid":"GO:1904098"},{"relation_name":"positively_regulates","term_name":"protein O-linked glycosylation","termid":"GO:0006493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006486"},{"rel_name":"positively_regulates","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"positive regulation of protein O-linked glycosylation","synonyms":[{"name":"activation of protein O-linked glycosylation","type":"narrow"},{"name":"activation of protein amino acid O-linked glycosylation","type":"narrow"},{"name":"positive regulation of protein amino acid O-linked glycosylation","type":"exact"},{"name":"up regulation of protein O-linked glycosylation","type":"exact"},{"name":"up regulation of protein amino acid O-linked glycosylation","type":"exact"},{"name":"up-regulation of protein O-linked glycosylation","type":"exact"},{"name":"up-regulation of protein amino acid O-linked glycosylation","type":"exact"},{"name":"upregulation of protein O-linked glycosylation","type":"exact"},{"name":"upregulation of protein amino acid O-linked glycosylation","type":"exact"}],"termid":"GO:1904100"}


id: GO:1990221
data:
  {"annotated_genes":["SJAG_00186","SJAG_03862","SJAG_00532","SJAG_01238","SJAG_04397","SJAG_01063","SJAG_00894"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106343,92690,102589,92462,109140,113313,97764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099128"}]},"cv_name":"cellular_component","definition":"A protein complex capable of cysteine desulfurase activity decomposing L-cysteine to L-alanine and sulfur. It belongs to a ubiquitous family of pyridoxal 5-phosphate (PLP)-dependent enzymes.","definition_xrefs":["PMID:11827487","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase complex","termid":"GO:1990228"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_03862":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"L-cysteine desulfurase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IscS","type":"narrow"},{"name":"NifS","type":"narrow"},{"name":"SufS complex","type":"narrow"}],"termid":"GO:1990221","terms_by_termid":{"GO:0099128":null}}


id: PBO:0030792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore_with_normal_morphology","termid":"PBO:0030792"}


id: PBO:0075498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 45","termid":"PBO:0075498"}


id: MONDO:0007869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kyrle disease is rare condition that affects the skin. People with this condition generally develop large papules with central keratin (a protein found in the skin, hair and nails) plugs throughout their body. These lesions are typically not painful but may cause severe itching. Although it can affect both men and women throughout life, the average age of onset is 30 years. The cause of the disease is currently unknown; however, it is often associated with certain conditions such as diabetes mellitus, kidney disease, liver abnormalities, and congestive heart failure. In some families, the condition appears to be inherited but an underlying genetic cause has not been identified. Treatment aims to address the associated signs and symptoms and any additional disease that may be present. Lesions often heal spontaneously but new ones continue to develop.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kyrle disease","secondary_identifiers":["MEDGEN:75516","OMIM:149500","SCTID:34042008","UMLS:C0263382","MESH:C538130"],"synonyms":[{"name":"Kyrle disease","type":"exact"},{"name":"Kyrle's disease","type":"related"},{"name":"hyperkeratosis follicularis et parafollicularis in cutem penetrans","type":"related"}],"termid":"MONDO:0007869","xrefs":{"Monarch":{"xref_id":"0007869"}}}


id: PBO:0053851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1120","termid":"PBO:0053851"}


id: PBO:0042890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP418 antisense RNA 1","termid":"PBO:0042890"}


id: PBO:0035962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_astral_microtubule_nucleation_during_mitosis","termid":"PBO:0035962"}


id: MONDO:0005500
data:
  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I","type":"exact"}],"termid":"MONDO:0005500","terms_by_termid":{"MONDO:0008907":null,"MONDO:0009890":null,"MONDO:0010472":null,"MONDO:0010998":null,"MONDO:0011257":null,"MONDO:0011291":null,"MONDO:0011783":null,"MONDO:0011933":null,"MONDO:0011964":null,"MONDO:0011969":null,"MONDO:0012052":null,"MONDO:0012117":null,"MONDO:0012123":null,"MONDO:0012556":null,"MONDO:0012783":null,"MONDO:0012885":null,"MONDO:0013049":null,"MONDO:0013349":null,"MONDO:0013789":null,"MONDO:0013968":null,"MONDO:0014023":null,"MONDO:0014270":null,"MONDO:0014271":null,"MONDO:0014543":null,"MONDO:0014647":null,"MONDO:0014904":null,"MONDO:0026729":null,"MONDO:0033556":null},"xrefs":{"Monarch":{"xref_id":"0005500"}}}


id: PBO:0084269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0084269"}


id: GO:0032792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor CREB.","definition_xrefs":["GOC:ecd","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-binding transcription factor activity","termid":"GO:0043433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of CREB transcription factor activity","synonyms":[{"name":"CREB inhibitor","type":"related"},{"name":"inhibition of CREB transcription factor","type":"exact"}],"termid":"GO:0032792"}


id: FYPO:0001059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutamate into the cell is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"},{"relation_name":"is_a","term_name":"abnormal glutamate import","termid":"FYPO:0001646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal glutamate import during vegetative growth","synonyms":[{"name":"abnormal L-glutamate import across plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal L-glutamate import during vegetative growth","type":"exact"},{"name":"abnormal glutamate import during mitotic cell cycle","type":"related"},{"name":"abnormal glutamate import into cell during vegetative growth","type":"exact"},{"name":"abnormal glutamate uptake during vegetative growth","type":"exact"}],"termid":"FYPO:0001059"}


id: PBO:0024804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables_activity_in","termid":"PBO:0024804"}


id: PBO:0038591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACAD9 divergent transcript","termid":"PBO:0038591"}


id: GO:1904242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic trypsinogen secretion.","definition_xrefs":["GOC:TermGenie","PMID:12771515","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"pancreatic trypsinogen secretion","termid":"GO:1990747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of pancreatic trypsinogen secretion","synonyms":[{"name":"regulation of pancreatic trypsinogen release","type":"exact"}],"termid":"GO:1904242"}


id: PBO:0077901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase delta 1","termid":"PBO:0077901"}


id: PBO:0043652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8 pseudogene 2","termid":"PBO:0043652"}


id: PBO:0055945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 53","termid":"PBO:0055945"}


id: MONDO:0003466
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synovial sarcoma characterized by the presence of a spindle cell component only.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell sarcoma","termid":"MONDO:0002927"},{"relation_name":"is_a","term_name":"monophasic synovial sarcoma","termid":"MONDO:0005067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spindle cell synovial sarcoma","secondary_identifiers":["MEDGEN:90795","ICDO:9041/3","DOID:5487","NCIT:C4277","UMLS:C0334505"],"synonyms":[{"name":"synovial sarcoma with spindle cell components","type":"exact"},{"name":"synovial sarcoma, monophasic fibrous","type":"exact"}],"termid":"MONDO:0003466","xrefs":{"Monarch":{"xref_id":"0003466"}}}


id: MONDO:0020297
data:
  {"annotated_genes":["SJAG_02536","SJAG_03126","SJAG_00993","SJAG_02342","SJAG_03453","SJAG_01181","SJAG_02923"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[84555,84557,84556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[84560,84562,84561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[84718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[86786,86787,86788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[85305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[86176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[85973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[85042,85043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"RASopathy","termid":"MONDO:0021060"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_02536":null,"SJAG_02923":null,"SJAG_03126":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome and Noonan-related syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:98733","MESH:C537846","GARD:19561","MEDGEN:1826127","UMLS:C5681679"],"termid":"MONDO:0020297","terms_by_termid":{"MONDO:0008104":null,"MONDO:0009026":null,"MONDO:0012371":null,"MONDO:0013186":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0033669":null,"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0020297"}}}


id: FYECO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which egtazic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ egtazic acid","synonyms":[{"name":"+ EGTA","type":"exact"},{"name":"EGTA added","type":"exact"},{"name":"egtazic acid added","type":"exact"}],"termid":"FYECO:0000411"}


id: PATO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in which the bearer is shaped like a narrow band; ligulate.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strap-shaped","termid":"PATO:0002430"}


id: GO:0046937
data:
  {"annotated_genes":["SJAG_02599","SJAG_01351","SJAG_00988","SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96873,107895,96518,92813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046938"},{"annotations":[96519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090423"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytochelatins, any of a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes. The structure is of the type (gamma-glutamyl-cysteinyl)n-glycine, where n is 2 to 11.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"phytochelatin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin metabolic process","type":"related"},{"name":"cadystin metabolism","type":"related"},{"name":"phytochelatin metabolism","type":"exact"}],"termid":"GO:0046937","terms_by_termid":{"GO:0046938":null,"GO:0090423":null}}


id: GO:0150166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K4 acetylation.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K4 acetylation (obsolete GO:0150166)","termid":"GO:0150166"}


id: PBO:0059045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMS22 like, DNA repair protein","termid":"PBO:0059045"}


id: GO:0010559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of glycoprotein metabolic process","termid":"GO:1903018"},{"relation_name":"regulates","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"}


id: GO:0070745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-12 alpha subunit (p35, product of the IL12A gene) and an EBI3 subunit and is secreted into the extracellular space.","definition_xrefs":["PMID:19161429","GOC:add","PMID:19161428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"interleukin-35 complex","synonyms":[{"name":"EBI3","type":"narrow"},{"name":"IL-35 complex","type":"exact"},{"name":"IL12A","type":"narrow"},{"name":"p35","type":"narrow"}],"termid":"GO:0070745"}


id: PBO:0068963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 207, pseudogene","termid":"PBO:0068963"}


id: GO:0005943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A class I phosphatidylinositol 3-kinase complex that possesses 1-phosphatidylinositol-4-phosphate 3-kinase activity; comprises a catalytic class IA phosphoinositide 3-kinase (PI3K) subunit and an associated SH2 domain-containing regulatory subunit that is a member of a family of related proteins often called p85 proteins. Through the interaction with the SH2-containing adaptor subunits, Class IA PI3K catalytic subunits are linked to tyrosine kinase signaling pathways.","definition_xrefs":["PMID:9255069","PMID:9759495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex, class I","termid":"GO:0097651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class IA","secondary_identifiers":["GO:0035030"],"synonyms":[{"name":"1-phosphatidylinositol-4-phosphate 3-kinase, class IA complex","type":"exact"},{"name":"1-phosphatidylinositol-4-phosphate kinase, class IA complex","type":"exact"},{"name":"class IA PI3K complex","type":"exact"},{"name":"phosphoinositide 3-kinase complex, class IA","type":"exact"}],"termid":"GO:0005943"}


id: PBO:0057261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 487a","termid":"PBO:0057261"}


id: GO:0061213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mesonephros development. Mesonephros development is the process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesonephros development","termid":"GO:0061217"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"positively_regulates","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesonephros development","termid":"GO:0061213"}


id: PBO:0040902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1P4-AGAP5 readthrough","termid":"PBO:0040902"}


id: PBO:0083467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NOP4/YPL043W","termid":"PBO:0083467"}


id: GO:0042965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a small disulfide-containing redox protein that serves as a glutathione-disulfide oxidoreductase.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutaredoxin biosynthetic process (obsolete GO:0042965)","synonyms":[{"name":"glutaredoxin anabolism","type":"exact"},{"name":"glutaredoxin biosynthesis","type":"exact"},{"name":"glutaredoxin formation","type":"exact"},{"name":"glutaredoxin synthesis","type":"exact"}],"termid":"GO:0042965"}


id: MONDO:0022757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 20 trisomy, (also called trisomy 20) is a condition in which a fetus or individual has an extra full or partial copy of chromosome 20 in some or allof of his/her cells. An extra full copy of chromosome 20 in all of a person's cells is rare, and almost all fetuses with this do not survive past the first trimester ofpregnancy. The presence of an extra copyof only part of chromosome 20 is called partial trisomy 20; and an extra copy of chromosome 20 in only some of a person's cells is called mosaic trisomy 20. Mosaic trisomy 20 is the most common type of chromosome 20 trisomy and is one of the more common chromosomal abnormalities found during prenatal diagnostic testing. Studies have shown that the child is normal in the vast majority of prenatally diagnosed individuals. However, features that have been reported include spinal abnormalities (including spinal stenosis, vertebral fusion, and kyphosis), hypotonia (decreased muscle tone), life long constipation, sloped shoulders, and significant learning disabilities despite normal intelligence. Trisomy 20 usually results from an error that occurs when an egg or sperm cell develops (before fertilization); mosaic trisomy 20 usually results from errors in cell division soon after fertilization.","definition_xrefs":["GARD:0005332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 trisomy","secondary_identifiers":["NCIT:C36397","GARD:5332","UMLS:C0265479","MEDGEN:120542","MESH:C535372"],"synonyms":[{"name":"mosaic trisomy 20","type":"related"},{"name":"trisomy 20","type":"related"},{"name":"trisomy 20 mosaicism","type":"related"},{"name":"trisomy chromosome 20","type":"related"}],"termid":"MONDO:0022757","xrefs":{"Monarch":{"xref_id":"0022757"}}}


id: PBO:0067688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 5","termid":"PBO:0067688"}


id: PBO:0070285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 26","termid":"PBO:0070285"}


id: PBO:0079825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like kinase 4","termid":"PBO:0079825"}


id: PBO:0075261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 14","termid":"PBO:0075261"}


id: PBO:0076561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3B","termid":"PBO:0076561"}


id: GO:0019001
data:
  {"annotated_genes":["SJAG_02292","SJAG_05332","SJAG_01929","SJAG_04509","SJAG_00968","SJAG_03461","SJAG_03453","SJAG_02605","SJAG_03137","SJAG_02856","SJAG_02656","SJAG_02180","SJAG_00231","SJAG_00360","SJAG_04470","SJAG_02595","SJAG_02601","SJAG_03371","SJAG_02640","SJAG_00663","SJAG_01339","SJAG_02331","SJAG_01358","SJAG_02302","SJAG_01769","SJAG_00457","SJAG_02444","SJAG_01379","SJAG_03846","SJAG_00659","SJAG_04003","SJAG_04343","SJAG_00906","SJAG_03342","SJAG_00983","SJAG_01534","SJAG_04004","SJAG_03072","SJAG_00424","SJAG_02520","SJAG_01851","SJAG_01438","SJAG_01695","SJAG_03275","SJAG_02353","SJAG_03188","SJAG_04410","SJAG_02509","SJAG_04375","SJAG_02684","SJAG_00414","SJAG_01789","SJAG_01558","SJAG_04940","SJAG_04874","SJAG_04366","SJAG_04666","SJAG_03688","SJAG_04157","SJAG_00044","SJAG_03684","SJAG_00226","SJAG_01215","SJAG_02374","SJAG_02848","SJAG_04351","SJAG_00466","SJAG_04387","SJAG_00118","SJAG_01696","SJAG_02366","SJAG_02171","SJAG_02233","SJAG_02661","SJAG_03732","SJAG_05030","SJAG_01456","SJAG_03959","SJAG_00801","SJAG_02824","SJAG_01909","SJAG_03915","SJAG_00840","SJAG_02604","SJAG_01774","SJAG_04233","SJAG_01391","SJAG_00031","SJAG_01277","SJAG_04862","SJAG_01449","SJAG_03374","SJAG_02384","SJAG_00344","SJAG_00430"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90367,109993,91208,91937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019003"},{"annotations":[115132,88401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019002"},{"annotations":[106019,100343,106904,104377,116770,101259,99457,112314,117803,97804,102980,109726,102256,90595,102142,93105,110976,87420,94731,95779,96570,88953,99215,100456,104888,116939,109994,110895,111847,116933,92376,91938,93351,96010,108788,117914,60872,89816,97398,111581,111848,102118,90808,97805,90368,93835,103498,106896,94011,100153,108166,109995,115416,92766,100781,93788,106645,93738,104084,106606,103154,93106,110293,100732,103406,105480,92217,118392,100943,99139,91529,92305,106667,92956,107932,89248,95265,108194,112975,116060,118391,99611,115379,91494,104134,102371,88755,104531,108727,91435,111849,117915,93104,88402,97248,108315,116938,97887,92903,109987,115529,109216,117913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005525"}]},"cv_name":"molecular_function","definition":"Binding to a guanyl nucleotide, consisting of guanosine esterified with (ortho)phosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide binding","termid":"GO:0017076"}],"gene_count":95,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00044":null,"SJAG_00118":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00360":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00801":null,"SJAG_00840":null,"SJAG_00906":null,"SJAG_00968":null,"SJAG_00983":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01534":null,"SJAG_01558":null,"SJAG_01695":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01789":null,"SJAG_01851":null,"SJAG_01909":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02374":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02509":null,"SJAG_02520":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02604":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02661":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03188":null,"SJAG_03275":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_03959":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04233":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04366":null,"SJAG_04375":null,"SJAG_04387":null,"SJAG_04410":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04862":null,"SJAG_04874":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"guanyl nucleotide binding","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-156909"],"termid":"GO:0019001","terms_by_termid":{"GO:0005525":null,"GO:0019002":null,"GO:0019003":null}}


id: MOD:02026
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteinyl-L-glycine dipeptide and an L-cysteine residue by a disulfide bond to form S-(cysteinyl-glycyl)-L-cysteine.","definition_xrefs":["PubMed:20594348","PubMed:27936627","PubMed:29627744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"},{"relation_name":"part_of","term_name":"L-cysteine glutathione disulfide","termid":"MOD:00234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(cysteinyl-glycyl)-L-cysteine","termid":"MOD:02026"}


id: PBO:0090167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor Eaf1","termid":"PBO:0090167"}


id: MONDO:0015597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis","termid":"MONDO:0005083"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"pustulosis palmaris et plantaris","secondary_identifiers":["MedDRA:10050185","SCTID:27520001","UMLS:C0030246","SCTID:81271001","NCIT:C34888","NORD:2008","GARD:12820","icd11.foundation:877172115","MEDGEN:45290","Orphanet:163927","ICD9:696.1","DOID:4398","ICD10CM:L40.3","MESH:D011565"],"synonyms":[{"name":"LPP","type":"exact"},{"name":"PPP","type":"exact"},{"name":"Palmoplantar Pustulosis","type":"exact"},{"name":"acropustulosis","type":"exact"},{"name":"localised pustular psoriasis","type":"exact"},{"name":"localized pustular psoriasis","type":"exact"},{"name":"palmoplantar pustulosis","type":"exact"},{"name":"pustular psoriasis of the palms and/or soles","type":"exact"},{"name":"pustulosis of palm and sole","type":"exact"}],"termid":"MONDO:0015597","xrefs":{"Monarch":{"xref_id":"0015597"}}}


id: PR:O13983
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrq1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase hrq1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.19c","synonyms":[{"name":"Spom972h-hrq1","type":"exact"},{"name":"homologous to recQ protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13983"}


id: MONDO:0850471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that is categorized as N1 with high probability by the LymphGen algorithm. This is based on a combination of genetic features. Although N1 DLBCLs always have an activating mutation affecting NOTCH1, LymphGen can assign cases with this mutation to other classes, depending on the presence of other genetic features.","definition_xrefs":["DOID:0081067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"N1 diffuse large B-cell lymphoma","secondary_identifiers":["UMLS:C4725004","MEDGEN:1650336"],"termid":"MONDO:0850471","xrefs":{"Monarch":{"xref_id":"0850471"}}}


id: PBO:0072008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 10","termid":"PBO:0072008"}


id: PBO:0061145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 family member 8","termid":"PBO:0061145"}


id: GO:1902556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of phosphatidylinositol transporter activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:9890948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphatidylinositol transporter complex","termid":"GO:1902556"}


id: PBO:0005189
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds 5'-TA[AG]GCAGNTN[CT]AACG[AC]G-3'","termid":"PBO:0005189"}


id: GO:0046726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process where the infecting virus increases the levels of viral proteins in a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation by virus of viral protein levels in host cell","termid":"GO:0046719"},{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by virus of viral protein levels in host cell","synonyms":[{"name":"activation of viral protein levels in host cell","type":"narrow"},{"name":"positive regulation of viral protein levels","type":"exact"},{"name":"stimulation of viral protein levels in host cell","type":"narrow"},{"name":"up regulation of viral protein levels in host cell","type":"exact"},{"name":"up-regulation of viral protein levels in host cell","type":"exact"},{"name":"upregulation of viral protein levels in host cell","type":"exact"}],"termid":"GO:0046726"}


id: PBO:0043941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod homeobox","termid":"PBO:0043941"}


id: FYPO:0007610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total volume of all mitochondria in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitochondrial volume","synonyms":[{"name":"decreased mitochondrial volume during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial volume during vegetative growth","type":"exact"},{"name":"decreased total mitochondrial volume","type":"exact"}],"termid":"FYPO:0007610"}


id: PBO:0065573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin-endoperoxide synthase 1","termid":"PBO:0065573"}


id: RO:0002427
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of causally upstream of or within","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"RO:0002501"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_downstream_of_or_within","termid":"RO:0002427"}


id: PBO:0004538
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Phx1","termid":"PBO:0004538"}


id: MONDO:0019200
data:
  {"annotated_genes":["SJAG_02712","SJAG_02295","SJAG_03557","SJAG_04529","SJAG_03827","SJAG_03592","SJAG_01526","SJAG_04497","SJAG_01998","SJAG_04495","SJAG_02163","SJAG_00531","SJAG_02955","SJAG_04637","SJAG_01634","SJAG_04334","SJAG_03795","SJAG_01422","SJAG_02150","SJAG_00643","SJAG_01152","SJAG_02946","SJAG_02947","SJAG_04296","SJAG_01298","SJAG_05342"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008379"},{"annotations":[85603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010828"},{"annotations":[85743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010806"},{"annotations":[85659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011075"},{"annotations":[86707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010723"},{"annotations":[86202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012363"},{"annotations":[84597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012477"},{"annotations":[86285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013468"},{"annotations":[84996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013516"},{"annotations":[85375,85376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013611"},{"annotations":[85360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014256"},{"annotations":[86125,86119,86121,86120,86123,86124,86122,86126,86127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014323"},{"annotations":[85807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014400"},{"annotations":[86361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015013"},{"annotations":[86241,86240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044320"},{"annotations":[85769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032604"}]},"cv_name":"mondo","definition":"Retinitis pigmentosa (RP) is an inherited retinal dystrophy leading to progressive loss of the photoreceptors and retinal pigment epithelium and resulting in blindness usually after several decades.","definition_xrefs":["Orphanet:791"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disorder of glycolysis","termid":"MONDO:0017688"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00531":null,"SJAG_00643":null,"SJAG_01152":null,"SJAG_01298":null,"SJAG_01422":null,"SJAG_01526":null,"SJAG_01634":null,"SJAG_01998":null,"SJAG_02150":null,"SJAG_02163":null,"SJAG_02295":null,"SJAG_02712":null,"SJAG_02946":null,"SJAG_02947":null,"SJAG_02955":null,"SJAG_03557":null,"SJAG_03592":null,"SJAG_03795":null,"SJAG_03827":null,"SJAG_04296":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04637":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10038914","NCIT:C85045","OMIMPS:268000","NORD:1661","NANDO:1200431","UMLS:C0035334","MESH:D012174","SCTID:28835009","ICD10CM:H35.5","GARD:5694","OMIM:268000","MEDGEN:20551","DOID:10584"],"synonyms":[{"name":"Rod-cone dystrophy","type":"related"},{"name":"pericentral pigmentary retinopathy","type":"narrow"},{"name":"retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0019200","terms_by_termid":{"MONDO:0008379":null,"MONDO:0010723":null,"MONDO:0010806":null,"MONDO:0010828":null,"MONDO:0011075":null,"MONDO:0012363":null,"MONDO:0012477":null,"MONDO:0013468":null,"MONDO:0013516":null,"MONDO:0013611":null,"MONDO:0014256":null,"MONDO:0014323":null,"MONDO:0014400":null,"MONDO:0015013":null,"MONDO:0032604":null,"MONDO:0044320":null},"xrefs":{"Monarch":{"xref_id":"0019200"}}}


id: PBO:0053947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1250","termid":"PBO:0053947"}


id: PBO:0087372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Squalene epoxidase; catalyzes the epoxidation of squalene to 2,3-oxidosqualene; plays an essential role in the ergosterol-biosynthesis pathway and is the specific target of the antifungal drug terbinafine; human SQLE functionally complements the lethality of the erg1 null mutation","termid":"PBO:0087372"}


id: FYPO:0006468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mature ribosomal RNA (rRNA) measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total rRNA or a specific rRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered mature rRNA level during vegetative growth","synonyms":[{"name":"abnormal rRNA level during vegetative growth","type":"broad"},{"name":"altered cellular mature rRNA level during vegetative growth","type":"exact"},{"name":"altered mature rRNA level during mitotic cell cycle","type":"related"},{"name":"altered mature rRNA transcript level during vegetative growth","type":"exact"},{"name":"altered mature ribosomal RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006468"}


id: MOD:01379
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 2'-methylsulfonyl-L-tryptophan.","definition_xrefs":["RESID:AA0450","PubMed:6893271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-methylsulfonyl-L-tryptophan","synonyms":[{"name":"2'-methylsulfonyl-L-tryptophan","type":"exact"},{"name":"2-methylsulfonyl-3-((2S)-2-amino-2-carboxyethyl)-1H-indole","type":"exact"},{"name":"MOD_RES 2'-methylsulfonyltryptophan","type":"exact"}],"termid":"MOD:01379"}


id: GO:0004609
data:
  {"annotated_genes":["SJAG_02980","SJAG_02902","SJAG_03524"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94158,95919,103822],"is_not":false,"summary":null,"term":"GO:0004609"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + phosphatidyl-L-serine = CO2 + phosphatidylethanolamine.","definition_xrefs":["EC:4.1.1.65","RHEA:20828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phosphatidylserine decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483212","KEGG_REACTION:R02055","MetaCyc:PHOSPHASERDECARB-RXN"],"synonyms":[{"name":"PS decarboxylase activity","type":"related"},{"name":"phosphatidyl-L-serine carboxy-lyase (phosphatidylethanolamine-forming)","type":"related"},{"name":"phosphatidyl-L-serine carboxy-lyase activity","type":"related"}],"termid":"GO:0004609","terms_by_termid":{"GO:0004609":null}}


id: GO:1901918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of exoribonuclease activity.","definition_xrefs":["PMID:22570495","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of exoribonuclease activity (obsolete GO:1901918)","synonyms":[{"name":"down regulation of exoribonuclease activity","type":"exact"},{"name":"down-regulation of exoribonuclease activity","type":"exact"},{"name":"downregulation of exoribonuclease activity","type":"exact"},{"name":"inhibition of exoribonuclease activity","type":"narrow"}],"termid":"GO:1901918"}


id: MONDO:1011083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, llama","secondary_identifiers":["OMIA:001033-9844"],"termid":"MONDO:1011083","xrefs":{"Monarch":{"xref_id":"1011083"}}}


id: GO:1990530
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions as a phospholipid-translocating P-Type ATPase. In budding yeast, this complex consists of Cdc50p and Drs2p proteins, and is involved in the trafficking of transport vesicles between the late Golgi and the early endosome.","definition_xrefs":["PMID:15090616","PMID:22234261","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid-translocating ATPase complex","termid":"GO:1990531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cdc50p-Drs2p complex","termid":"GO:1990530"}


id: PBO:0002983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine acetyltransferase (predicted)","termid":"PBO:0002983"}


id: PBO:0080692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 4","termid":"PBO:0080692"}


id: PBO:0083218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene COQ2","termid":"PBO:0083218"}


id: PBO:0060836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-MDP1 readthrough","termid":"PBO:0060836"}


id: PR:Q9UTD3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein YIPF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00197","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein YIP5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.06","secondary_identifiers":["UniProtKB:Q9UTD3"],"synonyms":[{"name":"Spom972h-YIPF1","type":"exact"},{"name":"YPT-interacting protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTD3"}


id: GO:0021961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the midbrain towards target cells in the diencephalon.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior commissure morphogenesis","termid":"GO:0021961"}


id: MONDO:0012215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, late adult-onset myofibrillar myopathy characterized by progressive distal muscle weakness associated with peripheral neuropathy and hyporeflexia. Ambulation may be lost within a few years.","definition_xrefs":["Orphanet:98911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"muscular dystrophy, limb-girdle, autosomal dominant","termid":"MONDO:0015151"},{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"},{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"myofibrillar myopathy 3","secondary_identifiers":["UMLS:C3714934","OMIM:159000","OMIM:609200","MESH:C000598645","DOID:0110300","OMIM:182920","SCTID:765092004","MESH:C563775","Orphanet:266","DOID:0080094","MESH:C535906","SCTID:719985001","SCTID:765196004","MEDGEN:811509","GARD:16871","Orphanet:268129"],"synonyms":[{"name":"LGMD1","type":"related"},{"name":"LGMD1A","type":"exact"},{"name":"MFM3","type":"related"},{"name":"MYOT autosomal dominant distal myopathy","type":"exact"},{"name":"MYOT autosomal dominant limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal dominant distal myopathy caused by mutation in MYOT","type":"exact"},{"name":"autosomal dominant limb-girdle muscular dystrophy caused by mutation in MYOT","type":"exact"},{"name":"autosomal dominant limb-girdle muscular dystrophy type 1A","type":"exact"},{"name":"autosomal dominant spheroid body myopathy","type":"related"},{"name":"distal myotilinopathy","type":"exact"},{"name":"limb-girdle muscular dystrophy due to myotilin deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 1A","type":"related"},{"name":"muscular dystrophy limb-girdle type 1A","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 1A","type":"related"},{"name":"muscular dystrophy, proximal, type 1A","type":"related"},{"name":"myofibrillar myopathy type 3","type":"exact"},{"name":"myopathy, myofibrillar, 3","type":"related"},{"name":"myopathy, myofibrillar, myotilin-related","type":"related"},{"name":"myopathy, myofibrillar, type 3","type":"exact"},{"name":"myopathy, spheroid body","type":"related"},{"name":"myotilinopathy","type":"exact"},{"name":"proximal muscular dystrophy type 1A","type":"exact"},{"name":"spheroid body myopathy","type":"exact"}],"termid":"MONDO:0012215","xrefs":{"Monarch":{"xref_id":"0012215"}}}


id: GO:0070848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to growth factor","synonyms":[{"name":"response to growth factor stimulus","type":"exact"}],"termid":"GO:0070848"}


