# terms

id: PBO:0085554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing a C-terminal SH3 domain; binds Las17p, which is a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization; protein abundance increases in response to DNA replication stress; LSB3 has a paralog, YSC84, that arose from the whole genome duplication","termid":"PBO:0085554"}


id: GO:0015252
data:
  {"annotated_genes":["SJAG_02564","SJAG_03114","SJAG_00438","SJAG_05204","SJAG_MIT15","SJAG_00542","SJAG_MIT37","SJAG_00985","SJAG_02598","SJAG_00915","SJAG_00133","SJAG_MIT09","SJAG_00836","SJAG_03925","SJAG_02105","SJAG_04122","SJAG_07003"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94349,102522,93372,107277,92364,92363,92786,103169,115291,118495,101310,108249,88646,107369,118501,103140,118507,104478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"}]},"cv_name":"molecular_function","definition":"Enables the facilitated diffusion of a hydrogen ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"proton channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9729542"],"synonyms":[{"name":"hydrogen ion channel activity","type":"exact"}],"termid":"GO:0015252","terms_by_termid":{"GO:0046933":null}}


id: MONDO:0018815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A locally aggressive and destructive benign cystic lesion of the bone. It is characterized by the formation of multiloculated hemorrhagic cystic spaces which are separated by fibrous septa. It can arise from any bone, but usually affects the metaphysis of long bones. It manifests with pain and swelling and may recur following curettage.","definition_xrefs":["NCIT:C3516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysmal bone cyst","secondary_identifiers":["Orphanet:480553","HP:0012063","ICD9:733.22","GARD:21982","OMIM:606179","MEDGEN:57758","MESH:D017824","EFO:1001760","UMLS:C0152244","SCTID:203468000","icd11.foundation:1603788294"],"synonyms":[{"name":"ABC","type":"exact"},{"name":"aneurysmal bone cyst","type":"exact"},{"name":"aneurysmal bone cyst (disease)","type":"exact"},{"name":"aneurysmal bone cysts","type":"exact"},{"name":"aneurysmal cyst of bone","type":"exact"},{"name":"aneurysmal cyst of the bone","type":"exact"}],"termid":"MONDO:0018815","xrefs":{"Monarch":{"xref_id":"0018815"}}}


id: GO:0070653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a high-density lipoprotein receptor.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor binding","termid":"GO:0070325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"high-density lipoprotein particle receptor binding","synonyms":[{"name":"HDL receptor binding","type":"exact"},{"name":"high-density lipoprotein receptor binding","type":"exact"}],"termid":"GO:0070653"}


id: PBO:0041504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13 open reading frame 42","termid":"PBO:0041504"}


id: PBO:0089152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim14","termid":"PBO:0089152"}


id: GO:0103016
data:
  {"annotated_genes":["SJAG_00358","SJAG_01302","SJAG_03932"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93776,105332,107877],"is_not":false,"summary":null,"term":"GO:0103016"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + ATP + S-sulfanyl-L-cysteinyl-[protein] + uridine(34) in tRNA = 2-thiouridine(34) in tRNA + A + AMP + diphosphate + H+ + L-cysteinyl-[protein].","definition_xrefs":["RHEA:47032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_01302":null,"SJAG_03932":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0140098","GO:0016740","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"tRNA-uridine 2-sulfurtransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.8.1.13","MetaCyc:RXN0-2023"],"synonyms":[{"name":"tRNA-specific 2-thiouridylase activity","type":"related"},{"name":"tRNA-uracil-34 sulfurtransferase activity","type":"related"}],"termid":"GO:0103016","terms_by_termid":{"GO:0103016":null}}


id: MONDO:0019344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Antisynthetase (AS) syndrome is a clinically heterogeneous form of idiopathic inflammatory myopathy characterized by myositis, arthralgia, Raynaud phenomenon, mechanic hands, interstitial lung disease (ILD), and serum autoantibodies to aminoacyl transfer RNA synthetases (anti-ARS).","definition_xrefs":["Orphanet:81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"antisynthetase syndrome","secondary_identifiers":["DOID:0080744","EFO:1001982","UMLS:C2609059","ICD9:279.49","GARD:735","MedDRA:10068801","MESH:C537778","NORD:1926","SCTID:445187004","icd11.foundation:1572057936","MEDGEN:388567"],"synonyms":[{"name":"AS syndrome","type":"exact"},{"name":"anti-Jo1 syndrome","type":"exact"}],"termid":"MONDO:0019344","xrefs":{"Monarch":{"xref_id":"0019344"}}}


id: PBO:0001183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug99","termid":"PBO:0001183"}


id: MONDO:0009470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Baraitser-Winter cerebrofrontofacial syndrome in which the cause of the disease is a mutation in the ACTB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Baraitser-Winter cerebrofrontofacial syndrome","termid":"MONDO:0017579"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Baraitser-Winter syndrome 1","secondary_identifiers":["OMIM:243310","MEDGEN:340943","DOID:0081112","GARD:15189","UMLS:C1855722"],"synonyms":[{"name":"ACTB Baraitser-Winter cerebrofrontofacial syndrome","type":"exact"},{"name":"ACTB-related BAFopathy","type":"exact"},{"name":"BRWS1","type":"related"},{"name":"Baraitser-WINTER syndrome 1","type":"related"},{"name":"Baraitser-Winter cerebrofrontofacial syndrome caused by mutation in ACTB","type":"exact"},{"name":"Baraitser-Winter syndrome 1","type":"exact"},{"name":"Baraitser-Winter syndrome type 1","type":"exact"},{"name":"Fryns-Aftimos syndrome","type":"exact"},{"name":"cerebrofrontofacial syndrome","type":"exact"},{"name":"cerebrooculofacial lymphatic syndrome","type":"related"},{"name":"chromosome 7P22 deletion syndrome","type":"related"},{"name":"intellectual disability with epilepsy and characteristic facies","type":"related"},{"name":"iris coloboma with ptosis, hypertelorism, and intellectual disability","type":"related"},{"name":"iris coloboma with ptosis, hypertelorism, and mental retardation","type":"related"},{"name":"mental retardation with epilepsy and characteristic facies","type":"related"},{"name":"pachygyria, intellectual disability, epilepsy, and characteristic facies","type":"related"},{"name":"pachygyria, mental retardation, epilepsy, and characteristic facies","type":"related"}],"termid":"MONDO:0009470","xrefs":{"Monarch":{"xref_id":"0009470"}}}


id: PR:O14232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superkiller viralicidic activity 2-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11752:SF2","OMA:SCHPO00545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase mtr4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.16c","secondary_identifiers":["UniProtKB:O14232"],"synonyms":[{"name":"Spom972h-SKIV2L2","type":"exact"}],"termid":"PR:O14232"}


id: PBO:0004517
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.97","termid":"PBO:0004517"}


id: GO:0052581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6R)-isoperitenone + H+ + NADPH = (2R,5R)-isopulegone + NADP+.","definition_xrefs":["EC:1.3.1.82","RHEA:25649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enone reductase activity","termid":"GO:0035671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(-)-isopiperitenone reductase activity","secondary_identifiers":["KEGG_REACTION:R06417","MetaCyc:RXN-5161"],"synonyms":[{"name":"(+)-cis-isopulegone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052581"}


id: GO:0003309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features of a type B pancreatic cell. A type B pancreatic cell is a cell located towards center of the islets of Langerhans that secretes insulin.","definition_xrefs":["CL:0000169","PMID:11076772","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"part_of","term_name":"endocrine pancreas development","termid":"GO:0031018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type B pancreatic cell differentiation","synonyms":[{"name":"pancreatic B cell differentiation","type":"exact"},{"name":"pancreatic beta cell differentiation","type":"exact"}],"termid":"GO:0003309"}


id: FYPO:0001395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal activation of monopolar cell growth","synonyms":[{"name":"normal activation of monopolar vegetative cell growth","type":"exact"},{"name":"normal initiation of growth from old end following cell division","type":"exact"}],"termid":"FYPO:0001395"}


id: GO:0006403
data:
  {"annotated_genes":["SJAG_04645","SJAG_04202","SJAG_01467","SJAG_04115","SJAG_03002","SJAG_03729","SJAG_02425","SJAG_04721","SJAG_01185","SJAG_03696","SJAG_04148","SJAG_03299","SJAG_00178","SJAG_02661","SJAG_04083","SJAG_03693","SJAG_02209","SJAG_01374","SJAG_00641","SJAG_01715","SJAG_00992","SJAG_00093","SJAG_01065","SJAG_03847","SJAG_01534","SJAG_03358","SJAG_03283","SJAG_04589","SJAG_04480","SJAG_02757","SJAG_02534","SJAG_02274","SJAG_00375","SJAG_01449","SJAG_04472","SJAG_01529","SJAG_03156","SJAG_01652","SJAG_03593","SJAG_05328","SJAG_03300","SJAG_00298","SJAG_02704","SJAG_04310","SJAG_03470","SJAG_02520","SJAG_04379","SJAG_03986","SJAG_04622","SJAG_00471","SJAG_01584","SJAG_04347","SJAG_04536","SJAG_00752","SJAG_04656","SJAG_04017","SJAG_05223","SJAG_01083","SJAG_01013"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008298"},{"annotations":[114956,116832,96600,100643,102482,116703,90124,88513,114335,104853,88996,103426],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006406"},{"annotations":[115862],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031990"},{"annotations":[59598,58026,64165],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051028"},{"annotations":[96037,114957,111200,109319,115759,69302,107099,114432,110571,109880,115864,100882,118361,112688,105633,115499,116011,101454,108155,91703,113903,115245,90463,103427,102237,101354,117458,105214,102139,96450],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016973"},{"annotations":[88524,93494,96009,95628,99907,104530,94483],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006405"},{"annotations":[102044],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006404"},{"annotations":[97447,117112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048254"},{"annotations":[111447,88862,112973,105216,104746],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006409"},{"annotations":[99041],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016031"},{"annotations":[112974],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"A process in which RNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule localization","termid":"GO:0033036"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00752":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01534":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03358":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03696":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05223":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"RNA localization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA localisation","type":"exact"},{"name":"establishment and maintenance of RNA localization","type":"exact"}],"termid":"GO:0006403","terms_by_termid":{"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0008298":null,"GO:0016031":null,"GO:0016973":null,"GO:0031990":null,"GO:0048254":null,"GO:0051028":null,"GO:0071528":null}}


id: GO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larva over time, from its formation to the mature structure. This begins with the newly hatched first-instar larva, through its maturation to the end of the last larval stage. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval development","termid":"GO:0002164"},{"relation_name":"is_a","term_name":"instar larval or pupal development","termid":"GO:0002165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"instar larval development","termid":"GO:0002168"}


id: FYPO:0003348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the substrate specificity of a gene product that executes glutathione synthetase activity in wild type is altered such that the gene product executes homoglutathione synthetase activity.","definition_xrefs":["PMID:23091597","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered substrate specificity","termid":"FYPO:0003347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"altered substrate specificity, glutathione synthetase to homoglutathione synthetase activity","synonyms":[{"name":"abnormal catalytic activity, altered substrate specificity, glutathione synthetase to homoglutathione synthetase activity","type":"exact"}],"termid":"FYPO:0003348"}


id: PBO:0034282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_with","termid":"PBO:0034282"}


id: PBO:0047578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGFR1 oncogene partner 2 pseudogene 1","termid":"PBO:0047578"}


id: MONDO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An opportunistic fungal infection caused by any of a variety of normally saprophytic fungi with hyaline hyphal elements. For example, Fusarium spp. infect neutropenic patients to cause pneumonia, fungemia, and disseminated infection with cutaneous lesions.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary systemic mycosis","termid":"MONDO:0000308"},{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"},{"relation_name":"is_a","term_name":"alternariosis","termid":"MONDO:0044083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phaeohyphomycosis","secondary_identifiers":["UMLS:C0276721","ICD9:117.8","SCTID:47158003","MESH:D060446","DOID:14049","icd11.foundation:547567937","MEDGEN:452374"],"synonyms":[{"name":"infection by dematiacious fungi","type":"exact"},{"name":"infection by dematiacious fungi [Phaehyphomycosis]","type":"exact"},{"name":"phaehyphomycosis","type":"exact"}],"termid":"MONDO:0001867","xrefs":{"Monarch":{"xref_id":"0001867"}}}


id: PBO:0002715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lipoate-protein ligase (predicted)","termid":"PBO:0002715"}


id: GO:1904050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spontaneous neurotransmitter secretion.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:pad","PMID:22314364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"regulation of spontaneous neurotransmitter secretion","termid":"GO:1904048"},{"relation_name":"positively_regulates","term_name":"spontaneous neurotransmitter secretion","termid":"GO:0061669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of spontaneous neurotransmitter secretion","synonyms":[{"name":"activation of spontaneous neurotransmitter secretion","type":"narrow"},{"name":"activation of stimulus-independent neurotransmitter secretion","type":"narrow"},{"name":"positive regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"up regulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"up regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"up-regulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"up-regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"upregulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"upregulation of stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:1904050"}


id: GO:0035094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus.","definition_xrefs":["ISBN:0198506732","ISBN:0582227089","GOC:bf","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nicotine","termid":"GO:0035094"}


id: PBO:0059322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 7","termid":"PBO:0059322"}


id: PBO:0038899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor B1","termid":"PBO:0038899"}


id: MONDO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsia conorii infectious disease","termid":"MONDO:0005677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Far eastern spotted fever","secondary_identifiers":["MEDGEN:759467","DOID:0050046","SCTID:472822008","UMLS:C3532354"],"synonyms":[{"name":"Rickettsia heilongjiangensis spotted fever","type":"exact"}],"termid":"MONDO:0000231","xrefs":{"Monarch":{"xref_id":"0000231"}}}


id: GO:0052819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heteroglycan + GDP-mannose = (1->2)-alpha-D-mannosylheteroglycan + GDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete heteroglycan 2-alpha-mannosyltransferase activity (obsolete GO:0052819)","synonyms":[{"name":"heteropolysaccharide 2-alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0052819"}


id: MONDO:0020370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cogan-Reese syndrome is a clinical variant of iridocorneal endothelial (ICE) syndrome characterized by variable iris atrophy, pigmented and pedunculated nodules on the iris and corneal abonormalities. Secondary glaucoma is also a common complication of the disease.","definition_xrefs":["Orphanet:98980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridocorneal endothelial syndrome","termid":"MONDO:0018988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cogan-Reese syndrome","secondary_identifiers":["icd11.foundation:1968906450","MedDRA:10059200","DOID:0060217","GARD:6125","MEDGEN:218910","NCIT:C84644","SCTID:404633004","UMLS:C1168173"],"termid":"MONDO:0020370","xrefs":{"Monarch":{"xref_id":"0020370"}}}


id: FYPO:0000977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to silver ions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular response to silver ion","synonyms":[{"name":"normal cellular response to silver ion during mitotic cell cycle","type":"related"},{"name":"normal cellular response to silver ion during vegetative growth","type":"exact"}],"termid":"FYPO:0000977"}


id: GO:0003250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell proliferation that contributes to the shaping of a heart valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000136"},{"relation_name":"regulates","term_name":"cell proliferation involved in heart valve morphogenesis","termid":"GO:0003249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in heart valve morphogenesis","termid":"GO:0003250"}


id: FYPO:0008030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a blue light photoreceptor activity is abnormal.","definition_xrefs":["PMID:23873862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal blue light photoreceptor activity","references_by_uniquename":{"PMID:23873862":null},"synonyms":[{"name":"defective blue light photoreceptor activity","type":"exact"}],"termid":"FYPO:0008030"}


id: PBO:0082086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase; synthesizes PRPP, which is required for nucleotide, histidine, and tryptophan biosynthesis; one of five related enzymes, which are active as heteromultimeric complexes; PRS2 has a paralog, PRS4, that arose from the whole genome duplication","termid":"PBO:0082086"}


id: PBO:0029379
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV","termid":"PBO:0029379"}


id: MONDO:0023809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Milner-Khallouf-Gibson syndrome","secondary_identifiers":["UMLS:C2931503","MEDGEN:419429","MESH:C537473"],"synonyms":[{"name":"Milner Khallouf Gibson syndrome","type":"related"},{"name":"microcephaly, short stature, slow growth, beak nose, micrognathia, skin dyspigmentation and forearm and thumb dysplasia","type":"related"}],"termid":"MONDO:0023809","xrefs":{"Monarch":{"xref_id":"0023809"}}}


id: PBO:0054420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1816","termid":"PBO:0054420"}


id: GO:0070639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D2, (3S,5Z,7E,22E)-9,10-secoergosta-5,7,10(19),22-tetraen-3-ol.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"vitamin D2 metabolic process","synonyms":[{"name":"calciferol metabolic process","type":"exact"},{"name":"ergocalciferol metabolic process","type":"exact"},{"name":"vitamin D2 metabolism","type":"exact"}],"termid":"GO:0070639"}


id: MONDO:0011140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign familial neonatal-infantile seizures (obsolete MONDO:0011140)","termid":"MONDO:0011140","xrefs":{"Monarch":{"xref_id":"0011140"}}}


id: PBO:0076814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 2","termid":"PBO:0076814"}


id: PBO:0084575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein required for translocation of Man5GlcNac2-PP-Dol; required for translocation of Man5GlcNac2-PP-Dol from the cytoplasmic side to the lumenal side of the ER membrane but is not the flippase; mutation is suppressed by expression of human p53 protein; essential gene","termid":"PBO:0084575"}


id: FYPO:0001418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology during vegetative growth","termid":"FYPO:0000352"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology","termid":"FYPO:0003064"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001418"}


id: GO:0031644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a neurophysiological process, an organ system process carried out by any of the organs or tissues of the nervous system.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nervous system process","synonyms":[{"name":"regulation of neurological process","type":"exact"},{"name":"regulation of neurological system process","type":"exact"},{"name":"regulation of neurophysiological process","type":"exact"}],"termid":"GO:0031644"}


id: PBO:0063782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 7","termid":"PBO:0063782"}


id: MONDO:0700221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease that occurs as a consequence of immunosuppression in a recipient of a solid organ transplant, or as a consequence of the transplantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease related to transplantation","termid":"MONDO:0700220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease related to solid organ transplantation","termid":"MONDO:0700221","xrefs":{"Monarch":{"xref_id":"0700221"}}}


id: MONDO:0020675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease of the large or small intestine that is caused by inadequate blood supply.","definition_xrefs":["NCIT:C35212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"ischemic disease","termid":"MONDO:0005053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"ischemic bowel disorder","secondary_identifiers":["MEDGEN:412148","UMLS:C2004435"],"synonyms":[{"name":"ischaemic bowel disease","type":"exact"},{"name":"ischemic bowel disease","type":"exact"}],"termid":"MONDO:0020675","xrefs":{"Monarch":{"xref_id":"0020675"}}}


id: PBO:0071157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 22","termid":"PBO:0071157"}


id: GO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK activity involved in cell wall organization or biogenesis (obsolete GO:0000200)","synonyms":[{"name":"cell wall biogenesis, inactivation of MAPK activity","type":"exact"},{"name":"cell wall biogenesis, termination of MAPK activity","type":"exact"},{"name":"inactivation of MAPK activity involved in cell wall integrity","type":"exact"},{"name":"inactivation of MAPK activity involved in cell wall organization or biogenesis","type":"related"},{"name":"termination of MAPK activity during cell wall biogenesis","type":"exact"}],"termid":"GO:0000200"}


id: GO:0046939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing one or more phosphate groups into a nucleotide to produce a phosphorylated nucleoside.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide phosphorylation (obsolete GO:0046939)","termid":"GO:0046939"}


id: PBO:0003646
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDG-Ii","termid":"PBO:0003646"}


id: GO:0016808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete proprotein convertase activity (obsolete GO:0016808)","synonyms":[{"name":"proprotein convertase activity","type":"exact"}],"termid":"GO:0016808"}


id: PBO:0031024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_concentration_of_pheromone_in_growth_medium","termid":"PBO:0031024"}


id: PBO:0080058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 28","termid":"PBO:0080058"}


id: GO:0016472
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of sodium ions across a membrane. The complex comprises a membrane sector (F0 or V0) that carries out ion transport and a cytoplasmic compartment sector (F1 or V1) that catalyzes ATP synthesis or hydrolysis.","definition_xrefs":["GOC:mah","PMID:14656431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sodium ion-transporting two-sector ATPase complex","synonyms":[{"name":"sodium-transporting two-sector ATPase complex","type":"exact"}],"termid":"GO:0016472"}


id: MONDO:0016975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thymic epithelial neoplasm characterized by the presence of a lymphocyte-poor component similar to that seen in type A thymoma and a lymphocyte-rich component which contains neoplastic small polygonal epithelial cells. It may be associated with myasthenia gravis and pure red cell aplasia. The majority of cases occur in the anterior mediastinum as Masaoka stage I tumors. A minority of the cases occur as stage II or stage III tumors. The overall survival is reported to be 80-100% at 5 and 10 years.","definition_xrefs":["NCIT:C6885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymoma","termid":"MONDO:0006456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymoma type AB","secondary_identifiers":["GARD:20894","Orphanet:263324","MEDGEN:220414","EFO:1000582","DOID:3280","ICD10CM:D15.0","ICDO:8582/1","UMLS:C1266092"],"synonyms":[{"name":"mixed type thymoma","type":"exact"},{"name":"primary thymic epithelial neoplasm type AB","type":"exact"},{"name":"primary thymic epithelial tumor type AB","type":"exact"},{"name":"primary thymic epithelial tumour type AB","type":"exact"},{"name":"thymoma type AB","type":"exact"},{"name":"thymoma, mixed type","type":"exact"}],"termid":"MONDO:0016975","xrefs":{"Monarch":{"xref_id":"0016975"}}}


id: PBO:0079036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 5-1","termid":"PBO:0079036"}


id: PBO:0054512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1912","termid":"PBO:0054512"}


id: GO:2000328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 17 cell lineage commitment.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell differentiation","termid":"GO:2000319"},{"relation_name":"regulates","term_name":"T-helper 17 cell lineage commitment","termid":"GO:0072540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 17 cell lineage commitment","synonyms":[{"name":"regulation of T-helper 17 cell fate commitment","type":"exact"},{"name":"regulation of Th17 cell lineage commitment","type":"exact"},{"name":"regulation of Th17 fate commitment","type":"exact"}],"termid":"GO:2000328"}


id: MONDO:0021497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the telencephalon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of cerebral hemisphere","termid":"MONDO:0021374"},{"relation_name":"is_a","term_name":"benign neoplasm of brain","termid":"MONDO:0021451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of cerebrum","secondary_identifiers":["UMLS:C0686378","SCTID:275269004","NCIT:C8548","icd11.foundation:1857115524","MEDGEN:195785"],"synonyms":[{"name":"benign cerebral hemispheric neoplasm","type":"exact"},{"name":"benign cerebral hemispheric tumor","type":"exact"},{"name":"benign cerebral hemispheric tumour","type":"exact"},{"name":"benign cerebral neoplasm","type":"exact"},{"name":"benign cerebral tumor","type":"exact"},{"name":"benign cerebral tumour","type":"exact"},{"name":"benign neoplasm of cerebral hemispheres","type":"exact"},{"name":"benign neoplasm of the cerebral hemispheres","type":"exact"},{"name":"benign neoplasm of the cerebrum","type":"exact"},{"name":"benign tumor of cerebral hemispheres","type":"exact"},{"name":"benign tumor of cerebrum","type":"exact"},{"name":"benign tumor of the cerebral hemispheres","type":"exact"},{"name":"benign tumor of the cerebrum","type":"exact"},{"name":"benign tumour of cerebral hemispheres","type":"exact"},{"name":"benign tumour of cerebrum","type":"exact"},{"name":"benign tumour of the cerebral hemispheres","type":"exact"},{"name":"benign tumour of the cerebrum","type":"exact"},{"name":"telencephalon benign neoplasm","type":"exact"}],"termid":"MONDO:0021497","xrefs":{"Monarch":{"xref_id":"0021497"}}}


id: MONDO:0009746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary sensory and autonomic neuropathy, type 4 (HSAN4) is an inherited disorder characterized by anhidrosis, insensitivity to pain, self-mutilating behavior and episodes of fever.","definition_xrefs":["Orphanet:642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy type 4","secondary_identifiers":["PMID:8696348","MEDGEN:6915","NANDO:2200854","SCTID:62985007","icd11.foundation:1831234152","NCIT:C118633","NANDO:1200553","GARD:3006","UMLS:C0020074","DOID:0070146","NORD:1236","OMIM:256800","PMID:14272277"],"synonyms":[{"name":"CIP-anhidrosis syndrome","type":"exact"},{"name":"CIPA","type":"related"},{"name":"HSAN 4","type":"related"},{"name":"HSAN IV","type":"related"},{"name":"HSAN4","type":"exact"},{"name":"HSNAN4","type":"related"},{"name":"Hereditary Sensory and Autonomic Neuropathy Type IV","type":"exact"},{"name":"NTRK1 hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"congenital insensitivity to pain with anhidrosis","type":"exact"},{"name":"congenital insensitivity to pain-anhidrosis syndrome","type":"exact"},{"name":"familial dysautonomia, type 2","type":"related"},{"name":"hereditary sensory and autonomic neuropathy 4","type":"related"},{"name":"hereditary sensory and autonomic neuropathy caused by mutation in NTRK1","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type IV","type":"exact"},{"name":"hereditary sensory neuropathy type 4","type":"related"},{"name":"hereditary sensory neuropathy type IV","type":"exact"},{"name":"insensitivity to pain, congenital, with anhidrosis","type":"exact"},{"name":"neuropathy, congenital sensory, with anhidrosis","type":"related"}],"termid":"MONDO:0009746","xrefs":{"Monarch":{"xref_id":"0009746"}}}


id: PBO:0048446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrulation brain homeobox 2","termid":"PBO:0048446"}


id: PBO:0031123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_ammonia_nitrogen_source","termid":"PBO:0031123"}


id: GO:0030602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the lysis of peptide bonds with broad specificity similar to that of pepsin A. Clots milk by cleavage of a single Ser-Phe-l-Met-Ala bond in kappa-casein.","definition_xrefs":["EC:3.4.23.4"],"gene_count":0,"genotype_count":0,"name":"obsolete chymosin activity (obsolete GO:0030602)","synonyms":[{"name":"chymosin activity","type":"exact"},{"name":"rennin","type":"related"},{"name":"rennin (but this should be avoided since it leads to confusion with renin)","type":"related"}],"termid":"GO:0030602"}


id: PBO:0039627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A9","termid":"PBO:0039627"}


id: GO:0050607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formaldehyde + mycothiol + NAD+ = S-formylmycothiol + NADH + H+.","definition_xrefs":["EC:1.1.1.306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mycothiol-dependent formaldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.1.66-RXN","RHEA:28502"],"synonyms":[{"name":"NAD/factor-dependent formaldehyde dehydrogenase activity","type":"related"},{"name":"formaldehyde:NAD+ oxidoreductase (mycothiol-formylating)","type":"exact"}],"termid":"GO:0050607"}


id: FYPO:0009100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing glycerol and galactose carbon sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0001985","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on glycerol and galactose carbon source","synonyms":[{"name":"decreased vegetative cell growth on glycerol and galactose carbon source","type":"exact"}],"termid":"FYPO:0009100"}


id: PBO:0087637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the eukaryotic translation initiation factor 3 (eIF3); component of unknown function; deletion causes defects in mitochondrial organization but not in growth or translation initiation; can rescue cytokinesis and mitochondrial organization defects of the Dictyostelium cluA- mutant; eIF3 is also involved in programmed stop codon readthrough","termid":"PBO:0087637"}


id: MONDO:0003188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete juvenile myoclonic epilepsy (obsolete MONDO:0003188)","termid":"MONDO:0003188","xrefs":{"Monarch":{"xref_id":"0003188"}}}


id: GO:0010101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the post-embryonic root are generated and organized. The post-embryonic root is the root formed after the embryonic phase has been completed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root morphogenesis","termid":"GO:0010015"},{"relation_name":"is_a","term_name":"post-embryonic plant organ morphogenesis","termid":"GO:0090697"},{"relation_name":"part_of","term_name":"post-embryonic root development","termid":"GO:0048528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic root morphogenesis","termid":"GO:0010101"}


id: MONDO:0008330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudomonilethrix","secondary_identifiers":["MESH:C562988","UMLS:C0432346","SCTID:254229006","OMIM:177750","icd11.foundation:207127044","MEDGEN:96595"],"synonyms":[{"name":"pseudomonilethrix","type":"exact"}],"termid":"MONDO:0008330","xrefs":{"Monarch":{"xref_id":"0008330"}}}


id: PBO:0038775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T3","termid":"PBO:0038775"}


id: PBO:0057371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548am","termid":"PBO:0057371"}


id: PBO:0071639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 3","termid":"PBO:0071639"}


id: MONDO:0035407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"furuncular myiasis","termid":"MONDO:0018941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"furuncular myiasis due to Cordylobia anthropophaga","secondary_identifiers":["MEDGEN:1386398","Orphanet:563687","UMLS:C4511624","GARD:22260","ICD10CM:B87.0"],"synonyms":[{"name":"furunculoid myiasis due to Cordylobia anthropophaga","type":"exact"},{"name":"furunculous myiasis due to Cordylobia anthropophaga","type":"exact"}],"termid":"MONDO:0035407","xrefs":{"Monarch":{"xref_id":"0035407"}}}


id: PBO:0059953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 39","termid":"PBO:0059953"}


id: GO:0072168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules of the anterior mesonephros acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"},{"relation_name":"is_a","term_name":"specification of mesonephric tubule identity","termid":"GO:0072167"},{"relation_name":"part_of","term_name":"anterior mesonephric tubule development","termid":"GO:0072165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of anterior mesonephric tubule identity","termid":"GO:0072168"}


id: GO:0071460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cell-matrix adhesion.","definition_xrefs":["PMID:11425869","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cell-matrix adhesion","termid":"GO:0071460"}


id: PBO:0059522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5","termid":"PBO:0059522"}


id: PBO:0059071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 1 pseudogene 1","termid":"PBO:0059071"}


id: PR:O13921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutS protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.01c","synonyms":[{"name":"Spom972h-msh1","type":"exact"}],"termid":"PR:O13921"}


id: PBO:0050206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 23","termid":"PBO:0050206"}


id: MONDO:1010114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phenylketonuria that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylketonuria, non-human animal","secondary_identifiers":["OMIA:002293"],"termid":"MONDO:1010114","xrefs":{"Monarch":{"xref_id":"1010114"}}}


id: PBO:0111332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L7-like protein involved in ribosome biogenesis","termid":"PBO:0111332"}


id: GO:0034915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-methyl-3-oxooctanoyl-CoA + CoA = acetyl-CoA + 2-methylhexanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0927"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylhexanoyl-CoA C-acetyltransferase activity (obsolete GO:0034915)","termid":"GO:0034915"}


id: GO:0016426
data:
  {"annotated_genes":["SJAG_02386","SJAG_02637"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100463,111598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160107"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing methyladenine.","definition_xrefs":["GOC:go-curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0140101","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"tRNA (adenine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA (adenine-C2-)-methyltransferase activity","type":"broad"}],"termid":"GO:0016426","terms_by_termid":{"GO:0160107":null}}


id: GO:0051831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of a second organism, where the two organisms are in a symbiotic interaction. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down the tissue of the second organism.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development in other organism during symbiotic interaction (obsolete GO:0051831)","synonyms":[{"name":"growth or development in other organism during symbiotic interaction","type":"exact"},{"name":"growth or development within other organism during symbiotic interaction","type":"exact"},{"name":"invasive growth","type":"broad"}],"termid":"GO:0051831"}


id: PBO:0077929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 2","termid":"PBO:0077929"}


id: PBO:0051494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 11","termid":"PBO:0051494"}


id: PBO:0031897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster assembly protein Nfu1 (predicted)","termid":"PBO:0031897"}


id: MONDO:0002691
data:
  {"annotated_genes":["SJAG_02049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"}]},"cv_name":"mondo","definition":"An epithelial or non-epithelial malignant neoplasm that arises from the liver. Representative examples include hepatocellular carcinoma, intrahepatic cholangiocarcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C34803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02049":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0345904","DOID:3571","ICD9:155.0","ICD9:155.2","SCTID:93870000","MEDGEN:87520"],"synonyms":[{"name":"Ca liver - primary","type":"exact"},{"name":"Resectable malignant neoplasm of liver","type":"exact"},{"name":"ca liver - primary","type":"exact"},{"name":"cancer of liver","type":"exact"},{"name":"hepatic cancer","type":"exact"},{"name":"hepatic neoplasm","type":"exact"},{"name":"liver cancer","type":"exact"},{"name":"malignant hepato-biliary neoplasm","type":"exact"},{"name":"malignant liver neoplasm","type":"exact"},{"name":"malignant neoplasm of liver","type":"exact"},{"name":"malignant neoplasm of liver, not specified as primary or secondary","type":"exact"},{"name":"malignant neoplasm of liver, primary","type":"exact"},{"name":"malignant tumor of liver","type":"exact"},{"name":"malignant tumour of liver","type":"exact"},{"name":"non-resectable primary hepatic malignant neoplasm","type":"exact"},{"name":"primary cancer of liver","type":"related"},{"name":"primary liver cancer","type":"exact"},{"name":"primary malignant liver neoplasm","type":"exact"},{"name":"primary malignant neoplasm of liver","type":"exact"},{"name":"primary tumor of the liver","type":"related"},{"name":"primary tumour of the liver","type":"related"},{"name":"resectable malignant neoplasm of the liver","type":"exact"}],"termid":"MONDO:0002691","terms_by_termid":{"MONDO:0007256":null},"xrefs":{"Monarch":{"xref_id":"0002691"}}}


id: FYPO:0001981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of DNA replication is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of DNA replication","synonyms":[{"name":"reduced rate of DNA replication","type":"exact"}],"termid":"FYPO:0001981"}


id: FYPO:0006686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA double-strand break resection is decreased. DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["GO:0000729","PomBase:mah","PMID:21931565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased DNA double-strand break processing","synonyms":[{"name":"decreased DNA double-strand break resection","type":"exact"},{"name":"decreased DNA double-strand break resectioning","type":"exact"},{"name":"decreased DSB processing","type":"exact"},{"name":"reduced DNA double-strand break processing","type":"exact"}],"termid":"FYPO:0006686"}


id: PR:O94515
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit zeta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02648","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit zeta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.11","secondary_identifiers":["UniProtKB:O94515"],"synonyms":[{"name":"CCT-zeta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT6A","type":"exact"},{"name":"TCP-1-zeta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94515"}


id: MONDO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lung parenchyma that is associated with pleurisy, inflammation of the pleura.","definition_xrefs":["MESH:D011001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleurisy","termid":"MONDO:0000986"},{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleuropneumonia","secondary_identifiers":["MEDGEN:18524","SCTID:60485005","icd11.foundation:1272236893","DOID:14319","UMLS:C0032241"],"termid":"MONDO:0001940","xrefs":{"Monarch":{"xref_id":"0001940"}}}


id: PBO:0082368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic helix-loop-helix (bHLH) protein; forms homodimer to bind E-box consensus sequence CACGTG present at MET gene promoters and centromere DNA element I (CDEI); affects nucleosome positioning at this motif; associates with other transcription factors such as Met4p and Isw1p to mediate transcriptional activation or repression; associates with kinetochore proteins, required for chromosome segregation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082368"}


id: PBO:0040686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS3 microtubule associated cell migration factor","termid":"PBO:0040686"}


id: PBO:0057924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3649","termid":"PBO:0057924"}


id: MONDO:0800064
data:
  {"annotated_genes":["SJAG_02349","SJAG_01005","SJAG_00288","SJAG_04934","SJAG_00516","SJAG_02413","SJAG_04956","SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[84693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[86232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007204"},{"annotations":[84972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014573"},{"annotations":[86031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012592"},{"annotations":[85796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009805"},{"annotations":[85666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013889"},{"annotations":[85693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009910"},{"annotations":[85133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","definition":"A skeletal dysplasia characterized by osteogenesis imperfecta and decreased bone density.","definition_xrefs":["HP:0004349","PMID:31633310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta","termid":"MONDO:0019019"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00288":null,"SJAG_00516":null,"SJAG_01005":null,"SJAG_02349":null,"SJAG_02413":null,"SJAG_04934":null,"SJAG_04956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta and a reduction of bone mineral density.","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800064","terms_by_termid":{"MONDO:0007204":null,"MONDO:0009805":null,"MONDO:0009910":null,"MONDO:0010208":null,"MONDO:0012592":null,"MONDO:0013051":null,"MONDO:0013889":null,"MONDO:0014573":null,"MONDO:0018163":null},"xrefs":{"Monarch":{"xref_id":"0800064"}}}


id: PBO:0002427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase (predicted)","termid":"PBO:0002427"}


id: GO:1900039
data:
  {"annotated_genes":["SJAG_03345","SJAG_01585"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88775,115838],"is_not":false,"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to hypoxia.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to hypoxia","termid":"GO:1900037"},{"relation_name":"positively_regulates","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01585":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to hypoxia","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cellular response to hypoxia","type":"related"},{"name":"activation of cellular response to hypoxic stress","type":"exact"},{"name":"activation of cellular response to lowered oxygen tension","type":"exact"},{"name":"positive regulation of cellular response to hypoxic stress","type":"exact"},{"name":"positive regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"up regulation of cellular response to hypoxia","type":"related"},{"name":"up regulation of cellular response to hypoxic stress","type":"exact"},{"name":"up regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"up-regulation of cellular response to hypoxia","type":"related"},{"name":"up-regulation of cellular response to hypoxic stress","type":"exact"},{"name":"up-regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"upregulation of cellular response to hypoxia","type":"related"},{"name":"upregulation of cellular response to hypoxic stress","type":"exact"},{"name":"upregulation of cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:1900039","terms_by_termid":{"GO:1900039":null}}


id: GO:0102669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: daidzein 7-O-beta-D-glucoside + H2O = daidzein + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isoflavone-7-O-glucoside beta-glucosidase activity (obsolete GO:0102669)","termid":"GO:0102669"}


id: PBO:0076170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 2","termid":"PBO:0076170"}


id: GO:1990025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Synaptic bouton found in the ventral horn of the spinal cord. F boutons range in diameter from 0.5 to 7 um and contain flattened or pleomorphic synaptic vesicles.","definition_xrefs":["NIF_Subcellular:nlx_subcell_100206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"F bouton","termid":"GO:1990025"}


id: GO:0015475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of adhesin from the periplasm to the external milieu; the adhesin and the porin are the N- and C-terminal regions of the same protein, respectively.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete adhesin autotransporter activity (obsolete GO:0015475)","termid":"GO:0015475"}


id: PBO:0060038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 26","termid":"PBO:0060038"}


id: PBO:0001883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein involved in autophagy Atg18a","termid":"PBO:0001883"}


id: PBO:0070246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 187 pseudogene","termid":"PBO:0070246"}


id: PBO:0058290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4665","termid":"PBO:0058290"}


id: PBO:0063577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 apoptosis effector related to PMP22","termid":"PBO:0063577"}


id: MONDO:0018599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"nuclear oculomotor paralysis","termid":"MONDO:0015083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital oculomotor nerve palsy","secondary_identifiers":["GARD:21836","Orphanet:440221","UMLS:C5680054","MEDGEN:1804232","icd11.foundation:2135160463"],"synonyms":[{"name":"congenital CNIII lesion","type":"exact"},{"name":"congenital third cranial nerve palsy","type":"exact"}],"termid":"MONDO:0018599","xrefs":{"Monarch":{"xref_id":"0018599"}}}


id: PBO:0046104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 7","termid":"PBO:0046104"}


id: PBO:0038726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 21","termid":"PBO:0038726"}


id: PBO:0005854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are2 (predicted)","termid":"PBO:0005854"}


id: PBO:0060260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin expression factor 2","termid":"PBO:0060260"}


id: PBO:0030054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_rhizoxin","termid":"PBO:0030054"}


id: MOD:01923
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-aspartic acid residue and an L-lysine residue by an isopeptide bond to form N6-(L-aspartyl)-L-lysine and the release of water.","definition_xrefs":["RESID:AA0583","PubMed:15044436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(L-aspartyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(2S)-2-amino-3-carboxypropanoyl]amino)hexanoic acid","type":"exact"},{"name":"N(epsilon)-(alpha-aspartyl)lysine","type":"exact"},{"name":"N6-(L-aspartyl)-L-lysine","type":"exact"},{"name":"XLNK-4Asp-N6Lys(Asp)","type":"exact"},{"name":"alpha-(N6-lysyl)aspartyl acid","type":"exact"},{"name":"aspartyl N6-lysine","type":"exact"}],"termid":"MOD:01923"}


id: PBO:0029371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0029371"}


id: PBO:0002489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor (predicted)","termid":"PBO:0002489"}


id: PBO:0049654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 8","termid":"PBO:0049654"}


id: GO:0015119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of hexose phosphate from one side of a membrane to the other. Hexose phosphates is any of a group of monophosphorylated aldoses with a chain of six carbon atoms in the molecule.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"hexose phosphate transmembrane transporter activity","termid":"GO:0015119"}


id: PBO:0050422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H1 pseudogene 1","termid":"PBO:0050422"}


id: FYPO:0001004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells to resume growth normally upon exiting G0 phase.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000004"],"is_obsolete":false,"name":"viable upon G0 to G1 transition","termid":"FYPO:0001004"}


id: PBO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.87","termid":"PBO:0000989"}


id: GO:0008752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + NAD(P)+ = FMN + NAD(P)H + H+. This reaction can utilize NADH and NADPH with similar reaction rates.","definition_xrefs":["EC:1.5.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"FMN reductase (NAD(P)H) activity","synonyms":[{"name":"FMN reductase activity","type":"broad"},{"name":"NAD(P)H dehydrogenase (FMN) activity","type":"exact"},{"name":"NAD(P)H-dependent FMN reductase activity","type":"related"},{"name":"flavin mononucleotide reductase activity","type":"related"}],"termid":"GO:0008752"}


id: PBO:0056272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1A member 2 pseudogene 1","termid":"PBO:0056272"}


id: MONDO:0006805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angina pectoris (or equivalent type of ischemic discomfort) which has recently changed in frequency, duration, intensity, or occurs at rest.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"intermediate coronary syndrome","secondary_identifiers":["ICD10CM:I20.0","MESH:D000789","DOID:8805","ICD9:411.1","UMLS:C0002965","MedDRA:10022554","MEDGEN:296","EFO:1000985"],"synonyms":[{"name":"Preinfarction angina","type":"exact"},{"name":"angina at rest","type":"exact"},{"name":"anginal chest pain at rest","type":"exact"},{"name":"impending infarction","type":"exact"},{"name":"unstable angina","type":"exact"},{"name":"worsening angina","type":"exact"}],"termid":"MONDO:0006805","xrefs":{"Monarch":{"xref_id":"0006805"}}}


id: _global:integral_part_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X integral_part_of Y if and only if: X part_of Y and Y has_part X.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral_part_of","termid":"_global:integral_part_of"}


id: PBO:0057274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mir-497-195 cluster host gene","termid":"PBO:0057274"}


id: MONDO:0021462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the rectum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal neoplasm","termid":"MONDO:0002165"},{"relation_name":"is_a","term_name":"benign neoplasm of large intestine","termid":"MONDO:0021444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of rectum","secondary_identifiers":["icd11.foundation:1805730142","MEDGEN:99222","UMLS:C0496867","NCIT:C4774","SCTID:92318000","ICD10CM:D12.8"],"synonyms":[{"name":"benign neoplasm of the rectum","type":"exact"},{"name":"benign rectal neoplasm","type":"exact"},{"name":"benign rectal neoplasms","type":"exact"},{"name":"benign rectal tumor","type":"exact"},{"name":"benign rectal tumors","type":"exact"},{"name":"benign rectal tumour","type":"exact"},{"name":"benign rectal tumours","type":"exact"},{"name":"benign tumor of rectum","type":"exact"},{"name":"benign tumor of the rectum","type":"exact"},{"name":"benign tumour of rectum","type":"exact"},{"name":"benign tumour of the rectum","type":"exact"},{"name":"rectal neoplasms, benign","type":"exact"},{"name":"rectal tumors, benign","type":"exact"},{"name":"rectum benign neoplasm","type":"exact"}],"termid":"MONDO:0021462","xrefs":{"Monarch":{"xref_id":"0021462"}}}


id: PBO:0080767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xin actin binding repeat containing 2","termid":"PBO:0080767"}


id: MONDO:0020417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anatomic abnormality that occurs during embryonic development, in which the aortic arch is right-sided.","definition_xrefs":["NCIT:C103917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic arch defects","termid":"MONDO:0015236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right aortic arch","secondary_identifiers":["icd11.foundation:769265824","MedDRA:10067407","GARD:19640","Orphanet:99081","SCTID:111321007","UMLS:C0035615","HP:0012020","MEDGEN:48474"],"synonyms":[{"name":"right aortic arch","type":"exact"},{"name":"right aortic arch (disease)","type":"exact"}],"termid":"MONDO:0020417","xrefs":{"Monarch":{"xref_id":"0020417"}}}


id: MONDO:0010547
data:
  {"annotated_genes":["SJAG_01400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85147],"is_not":false,"summary":null,"term":"MONDO:0010547"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked cerebellar ataxia","termid":"MONDO:0016612"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01400":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked progressive cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:1175","UMLS:C0796205","GARD:16558","DOID:0111829","MESH:C563134","OMIM:302500","MEDGEN:163229"],"synonyms":[{"name":"OPCA, X-linked","type":"related"},{"name":"SCAX1","type":"related"},{"name":"olivopontocerebellar atrophy, X-linked","type":"related"},{"name":"spinocerebellar ataxia, X-linked 1","type":"related"},{"name":"spinocerebellar ataxia, X-linked 1, X-linked recessive","type":"exact"},{"name":"spinocerebellar ataxia, X-linked type 1","type":"exact"}],"termid":"MONDO:0010547","terms_by_termid":{"MONDO:0010547":null},"xrefs":{"Monarch":{"xref_id":"0010547"}}}


id: FYPO:0001589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of glutamate into the cell occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutamate import during nitrogen starvation","termid":"FYPO:0001647"},{"relation_name":"is_a","term_name":"decreased glutamate import","termid":"FYPO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased glutamate import during nitrogen starvation","synonyms":[{"name":"decreased L-glutamate import across plasma membrane during nitrogen starvation","type":"exact"},{"name":"decreased L-glutamate import during nitrogen starvation","type":"exact"},{"name":"decreased glutamate import during nitrogen depletion","type":"exact"},{"name":"decreased glutamate import during nitrogen deprivation","type":"exact"},{"name":"decreased glutamate import into cell during nitrogen starvation","type":"exact"},{"name":"decreased glutamate transport into cell during nitrogen starvation","type":"exact"},{"name":"decreased glutamate uptake during nitrogen starvation","type":"exact"},{"name":"reduced glutamate import during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001589"}


id: MONDO:0008577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toe, misshapen","secondary_identifiers":["UMLS:C1861061","MEDGEN:396052","OMIM:189100"],"synonyms":[{"name":"toe, misshapen","type":"exact"}],"termid":"MONDO:0008577","xrefs":{"Monarch":{"xref_id":"0008577"}}}


id: PBO:0058049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4270","termid":"PBO:0058049"}


id: PBO:0005827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase (predicted)","termid":"PBO:0005827"}


id: PBO:0111687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1L3","termid":"PBO:0111687"}


id: FYPO:0000744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to actin cortical patch","synonyms":[{"name":"normal protein localisation to actin cortical patch","type":"exact"},{"name":"normal protein localization to F-actin patch","type":"exact"},{"name":"normal protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"normal protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"normal protein localization to actin patch","type":"exact"}],"termid":"FYPO:0000744"}


id: PBO:0029161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_resistance_to_chemical","termid":"PBO:0029161"}


id: PBO:0054791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2204","termid":"PBO:0054791"}


id: PR:Q03392
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03781","PANTHER:PTHR11352:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.09","secondary_identifiers":["UniProtKB:Q03392"],"synonyms":[{"name":"PCNA (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCNA","type":"exact"}],"termid":"PR:Q03392"}


id: GO:0098967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The exocytic fusion of neurotransmitter receptor containing vesicles with the postsynaptic membrane resulting in the integration of NT receptors, enabling them to participate in neurotransmitter reception. This process includes tethering and docking steps that prepare vesicles for fusion.","definition_xrefs":["PMID:19503082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytosis","termid":"GO:0006887"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"part_of","term_name":"neurotransmitter receptor transport to postsynaptic membrane","termid":"GO:0098969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"exocytic insertion of neurotransmitter receptor to postsynaptic membrane","termid":"GO:0098967"}


id: PBO:0028057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_linear_element_morphology","termid":"PBO:0028057"}


id: GO:0004743
data:
  {"annotated_genes":["SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97777],"is_not":false,"summary":null,"term":"GO:0004743"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: = ADP + H+ + phosphoenolpyruvate => ATP + pyruvate.","definition_xrefs":["RHEA:18159","EC:2.7.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyruvate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PEPDEPHOS-RXN","Reactome:R-HSA-71670"],"synonyms":[{"name":"ATP:pyruvate 2-O-phosphotransferase activity","type":"related"},{"name":"phosphoenol transphosphorylase activity","type":"related"},{"name":"phosphoenolpyruvate kinase activity","type":"related"}],"termid":"GO:0004743","terms_by_termid":{"GO:0004743":null}}


id: PBO:0078832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon CGG) 1-3","termid":"PBO:0078832"}


id: PBO:0041591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5A","termid":"PBO:0041591"}


id: PBO:0055051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2466","termid":"PBO:0055051"}


id: PBO:0066752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 50","termid":"PBO:0066752"}


id: GO:0090110
data:
  {"annotated_genes":["SJAG_02539","SJAG_05345","SJAG_03153","SJAG_03558","SJAG_05344","SJAG_00072","SJAG_02349"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70954,74689,92864,109665,111428,112159,116037],"is_not":false,"summary":null,"term":"GO:0090110"}]},"cv_name":"biological_process","definition":"The formation of a macromolecular complex between the COPII coat proteins and proteins and/or lipoproteins that are going to be transported by the COPII vesicle to the Golgi.","definition_xrefs":["GOC:dph","GOC:lb","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle cargo loading","termid":"GO:0035459"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"part_of","term_name":"COPII-coated vesicle budding","termid":"GO:0090114"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"COPII-coated vesicle cargo loading","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COPII coat-cargo complex assembly","type":"related"},{"name":"cargo loading into COPII vesicle","type":"exact"},{"name":"cargo loading into COPII-coated vesicle","type":"exact"},{"name":"cargo selection into COPII-coated vesicle","type":"exact"}],"termid":"GO:0090110","terms_by_termid":{"GO:0090110":null}}


id: PBO:0049363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 22","termid":"PBO:0049363"}


id: PBO:0018277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med4","termid":"PBO:0018277"}


id: MOD:00958
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslink between Arg and His sidechains","termid":"MOD:00958"}


id: MONDO:0009410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Addison disease (obsolete MONDO:0009410)","secondary_identifiers":["NANDO:1200412","NANDO:1200411","NANDO:2200359","NANDO:2200360"],"termid":"MONDO:0009410","xrefs":{"Monarch":{"xref_id":"0009410"}}}


id: PBO:0028341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cell_cycle_spindle_assembly_checkpoint","termid":"PBO:0028341"}


id: GO:0106301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-5,6-epoxyeicosatrienoic acid.","definition_xrefs":["RHEA:49936","PMID:10491410","PMID:8631948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate epoxygenase activity","termid":"GO:0008392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"arachidonate 5,6-epoxygenase activity","synonyms":[{"name":"arachidonic acid 5,6-epoxygenase activity","type":"exact"}],"termid":"GO:0106301"}


id: GO:1903377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oxidative stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","PMID:15790595","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902176"},{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903376"},{"relation_name":"negatively_regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0036480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"down regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"down-regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"down-regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"downregulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"downregulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"inhibition of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"inhibition of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"negative regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"negative regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"negative regulation of oxidative stress-induced neuron apoptosis","type":"exact"},{"name":"neuroprotection against oxidative stress-induced apoptosis","type":"related"},{"name":"protection against oxidative stress-induced neuron apoptosis","type":"related"},{"name":"protection against oxidative stress-induced neuronal apoptosis","type":"related"}],"termid":"GO:1903377"}


id: PBO:0084375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Long chain fatty acyl-CoA synthetase; activates fatty acids with a preference for C12:0-C16:0 chain lengths; role in the competitive import of long-chain fatty acids and sphingoid long-chain bases; accounts for most acyl-CoA synthetase activity; localizes to lipid particles and the plasma membrane; role in sphingolipid-to-glycerolipid metabolism; forms ER foci upon replication stress; faa1 faa4 double null complemented by any of human ACSBG1, ACSL1, 3, 4, 5, 6, SLC27A2, or 4","termid":"PBO:0084375"}


id: PBO:0080072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 36","termid":"PBO:0080072"}


id: MONDO:0019211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated congenital anonychia is characterized by nail abnormalities ranging from onychodystrophy (dystrophic nails) to anonychia (absence of nails). Onychodystrophy-anonychia has been described in at least four generations of a family with male-to-male transmission, suggesting autosomal dominant transmission. Anonychia has been described in approximately less than 20 cases; it is likely to be transmitted as an autosomal recessive trait. Total anonychia congenita, in which all the fingernails and toenails are absent, may have an autosomal dominant inheritance pattern.","definition_xrefs":["Orphanet:79143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital anonychia","secondary_identifiers":["GARD:10048"],"synonyms":[{"name":"autosomal recessive nonsyndromic congenital nail disorder-4","type":"related"},{"name":"congenital anonychia","type":"related"},{"name":"isolated anonychia","type":"exact"},{"name":"nonsyndromic congenital nail disorder, 4","type":"related"}],"termid":"MONDO:0019211","xrefs":{"Monarch":{"xref_id":"0019211"}}}


id: MONDO:0002228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant ovarian surface epithelial-stromal neoplasm (obsolete MONDO:0002228)","termid":"MONDO:0002228","xrefs":{"Monarch":{"xref_id":"0002228"}}}


id: GO:1902742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in anatomical structure development.","definition_xrefs":["GOC:mtg_apoptosis","GO_REF:0000060","GOC:pg","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"},{"relation_name":"part_of","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in development","synonyms":[{"name":"activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"apoptosis involved in anatomical structure development","type":"narrow"},{"name":"apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"apoptotic process involved in anatomical structure development","type":"exact"},{"name":"apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"type I programmed cell death involved in development of an anatomical structure","type":"narrow"}],"termid":"GO:1902742"}


id: RO:0002469
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"provides_nutrients_for","termid":"RO:0002469"}


id: GO:0045742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042058"},{"relation_name":"is_a","term_name":"positive regulation of ERBB signaling pathway","termid":"GO:1901186"},{"relation_name":"positively_regulates","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermal growth factor receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-8849469"],"synonyms":[{"name":"activation of epidermal growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of EGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of EGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of EGFR signaling pathway","type":"exact"},{"name":"stimulation of epidermal growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of epidermal growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0045742"}


id: FYPO:0000966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000965"},{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000966"}


id: PBO:0072539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 69","termid":"PBO:0072539"}


id: MOD:01172
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-alanyl-glycosylsphingolipidinositolethanolamine.","definition_xrefs":["PubMed:12626404","RESID:AA0424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylsphingolipidinositolated residue","termid":"MOD:00466"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:00764"],"is_obsolete":false,"name":"N-alanyl-glycosylsphingolipidinositolethanolamine","synonyms":[{"name":"GSIAla","type":"exact"},{"name":"LIPID GPI-like-anchor amidated alanine","type":"exact"},{"name":"N-alanyl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"MOD:01172"}


id: PBO:0091162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ReqQ-type subtelomeric helicase fragment","termid":"PBO:0091162"}


id: GO:0048401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of intermediate mesodermal cell fate specification","termid":"GO:0048399"},{"relation_name":"negatively_regulates","term_name":"intermediate mesodermal cell fate specification","termid":"GO:0048398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intermediate mesodermal cell fate specification","synonyms":[{"name":"down regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"downregulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"inhibition of intermediate mesodermal cell fate specification","type":"narrow"}],"termid":"GO:0048401"}


id: SO:0000565
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VDJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VDJ_gene_segment","termid":"SO:0000574"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VDJ_J_C_cluster","synonyms":[{"name":"V VDJ J C cluster","type":"exact"},{"name":"V-(VDJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000565"}


id: PBO:0089678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex 3'-5'-exoribonuclease subunit 6","termid":"PBO:0089678"}


id: PBO:0071984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 13","termid":"PBO:0071984"}


id: MOD:01353
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:12643539","PubMed:15602776","PubMed:6273432","Unimod:141#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidination of lysines or N-terminal amines with methyl acetimidate","termid":"MOD:00509"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidination of lysines or N-terminal amines with methyl acetimidate - site K","synonyms":[{"name":"Amidine","type":"related"},{"name":"amidination of lysines or N-terminal amines with methyl acetimidate","type":"related"}],"termid":"MOD:01353"}


id: MONDO:1012358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early retinal degeneration, non-human animal","termid":"MONDO:1011985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early retinal degeneration, dog","secondary_identifiers":["OMIA:001297-9615"],"termid":"MONDO:1012358","xrefs":{"Monarch":{"xref_id":"1012358"}}}


id: GO:1990091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sodium-dependent hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.","definition_xrefs":["PMID:20460380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self proteolysis","termid":"GO:0097264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sodium-dependent self proteolysis","termid":"GO:1990091"}


id: GO:1900540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"fumonisin metabolic process","termid":"GO:1900539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"fumonisin catabolic process","synonyms":[{"name":"fumonisin breakdown","type":"exact"},{"name":"fumonisin catabolism","type":"exact"},{"name":"fumonisin degradation","type":"related"}],"termid":"GO:1900540"}


id: PBO:0091131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H Rnh1","termid":"PBO:0091131"}


id: GO:0052614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + NADH + O2 + uracil = (Z)-3-ureidoacrylate + FMN + H+ + H2O + NAD+. Can also use thymine as a substrate.","definition_xrefs":["PMID:20369853","RHEA:31587","PMID:20400551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"uracil oxygenase activity","secondary_identifiers":["EC:1.14.99.46","MetaCyc:RXN0-6444"],"synonyms":[{"name":"pyrimidine oxygenase activity","type":"broad"}],"termid":"GO:0052614"}


id: GO:0031811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G protein-coupled (metabotropic) nucleotide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"G protein-coupled nucleotide receptor binding","synonyms":[{"name":"G-protein coupled nucleotide receptor binding","type":"exact"},{"name":"P2Y receptor binding","type":"exact"},{"name":"metabotropic nucleotide receptor binding","type":"exact"},{"name":"metabotropic nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031811"}


id: PBO:0059964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 9","termid":"PBO:0059964"}


id: PBO:0059148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloperoxidase","termid":"PBO:0059148"}


id: PBO:0063671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3","termid":"PBO:0063671"}


id: PATO:0000615
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally anterior structures.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterioralized","termid":"PATO:0000615"}


id: PBO:0026781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_progression_following_cellular_response_to_hydroxyurea","termid":"PBO:0026781"}


id: PBO:0085685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recovery from arrest in response to pheromone; acts in a cell cycle arrest recovery pathway independent from Far1p; interacts with Far3p, Far7p, Far8p, Far9p, and Far11p; potential Cdc28p substrate; FAR10 has a paralog, VPS64, that arose from the whole genome duplication","termid":"PBO:0085685"}


id: PBO:0065191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 3","termid":"PBO:0065191"}


id: GO:0034255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving urea.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"regulates","term_name":"urea metabolic process","termid":"GO:0019627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0071941"],"is_obsolete":false,"name":"regulation of urea metabolic process","synonyms":[{"name":"regulation of urea metabolism","type":"exact"}],"termid":"GO:0034255"}


id: MONDO:0008766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amaurosis hypertrichosis is characterized by severe retinal dystrophy marked by visual impairment and profound photophobia without night blindness. Eye examination suggested a cone-rod type of congenital amaurosis. Trichomegaly, bushy eyebrows with synophyrys, and excessive facial and body hair were also reported. The syndrome has been described in two female cousins both born to consanguineous parents.","definition_xrefs":["Orphanet:1021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"amaurosis-hypertrichosis syndrome","secondary_identifiers":["SCTID:720983002","MESH:C536604","UMLS:C1857588","MEDGEN:341805","GARD:637","ICD10CM:H35.5","OMIM:204110"],"synonyms":[{"name":"amaurosis congenita cone-rod type with congenital hypertrichosis","type":"related"},{"name":"amaurosis congenita, cone-rod type, with congenital hypertrichosis","type":"related"}],"termid":"MONDO:0008766","xrefs":{"Monarch":{"xref_id":"0008766"}}}


id: MONDO:0007797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The HDR syndrome is an inherited condition consisting of hypoparathyroidism, sensorineural deafness and renal disease.","definition_xrefs":["Orphanet:2237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 10","termid":"MONDO:0016892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoparathyroidism-deafness-renal disease syndrome","secondary_identifiers":["MESH:C537907","GARD:2911","UMLS:C1840333","OMIM:146255","MEDGEN:374443","NORD:837","DOID:0060878","NCIT:C130983","SCTID:724282009"],"synonyms":[{"name":"Barakat Syndrome","type":"exact"},{"name":"Barakat syndrome","type":"exact"},{"name":"HDR","type":"related"},{"name":"HDR syndrome","type":"exact"},{"name":"hypoparathyroidism, deafness, and renal anomalies syndrome","type":"exact"},{"name":"hypoparathyroidism, sensorineural deafness, and renal disease","type":"exact"},{"name":"hypoparathyroidism, sensorineural deafness, and renal dysplasia","type":"related"},{"name":"hypoparathyroidism, sensorineural deafness, and renal dysplasia syndrome","type":"related"},{"name":"hypoparathyroidism-deafness-renal disease syndrome","type":"exact"},{"name":"nephrosis, nerve deafness, and hypoparathyroidism","type":"related"}],"termid":"MONDO:0007797","xrefs":{"Monarch":{"xref_id":"0007797"}}}


id: PR:O74838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf10 gene.","definition_xrefs":["UniProtKB:O74838","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.10","synonyms":[{"name":"Spom972h-wtf10","type":"exact"}],"termid":"PR:O74838"}


id: GO:0010195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of microRNA, a large family of 21-22 nucleotide non-coding RNAs with presumed post-transcriptional regulatory activity.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete microRNA biosynthetic process (obsolete GO:0010195)","synonyms":[{"name":"miRNA biosynthesis","type":"exact"},{"name":"miRNA biosynthetic process","type":"exact"},{"name":"microRNA anabolism","type":"exact"},{"name":"microRNA biosynthesis","type":"exact"},{"name":"microRNA biosynthetic process","type":"exact"},{"name":"microRNA formation","type":"exact"},{"name":"microRNA synthesis","type":"exact"}],"termid":"GO:0010195"}


id: MONDO:0003930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stage 0 includes: 0a (Ta, N0, M0); 0is (Tis, N0, M0). Ta: Noninvasive papillary carcinoma. Tis: Carcinoma in situ: \\\"flat tumor\\\". N0: No regional lymph node metastasis. M0: No distant metastasis. (AJCC 6th and 7th eds.)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-invasive bladder urothelial carcinoma","secondary_identifiers":["UMLS:C1336089","NCIT:C6188","MEDGEN:233466","DOID:6571"],"synonyms":[{"name":"non-invasive bladder urothelial carcinoma","type":"exact"},{"name":"stage 0 bladder urothelial cancer","type":"exact"},{"name":"stage 0 bladder urothelial carcinoma","type":"exact"},{"name":"stage 0 bladder urothelial carcinoma aJCC v6","type":"exact"},{"name":"stage 0 bladder urothelial carcinoma aJCC v6 and v7","type":"exact"},{"name":"stage 0 bladder urothelial carcinoma aJCC v7","type":"exact"},{"name":"stage 0 transitional cell carcinoma of bladder","type":"exact"},{"name":"stage 0 transitional cell carcinoma of the bladder","type":"exact"},{"name":"stage 0 transitional cell carcinoma of the urinary bladder","type":"exact"},{"name":"stage 0 transitional cell carcinoma of urinary bladder","type":"exact"},{"name":"stage 0 urinary bladder transitional cell carcinoma","type":"exact"}],"termid":"MONDO:0003930","xrefs":{"Monarch":{"xref_id":"0003930"}}}


id: PBO:0000942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA ligase Cdc17","termid":"PBO:0000942"}


id: MONDO:0014613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pulmonary fibrosis and/or bone marrow failure, Telomere-related in which the cause of the disease is a mutation in the RTEL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete idiopathic pulmonary fibrosis (obsolete MONDO:0008345)","termid":"MONDO:0008345"},{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"},{"relation_name":"is_a","term_name":"dyskeratosis congenita and related telomere biology disorder","termid":"MONDO:0800467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 3","secondary_identifiers":["UMLS:C4225346","GARD:16098","OMIM:616373","MEDGEN:901644"],"synonyms":[{"name":"PFBMFT3","type":"related"},{"name":"RTEL1 pulmonary fibrosis and/or bone marrow failure, Telomere-related","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 3","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related caused by mutation in RTEL1","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 3","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 3","type":"exact"}],"termid":"MONDO:0014613","xrefs":{"Monarch":{"xref_id":"0014613"}}}


id: MONDO:0003349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the central nervous system. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C6999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"malignant central nervous system mesenchymal, non-meningothelial neoplasm","termid":"MONDO:0037740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system leiomyosarcoma","secondary_identifiers":["UMLS:C1334385","DOID:5254","MEDGEN:235254"],"synonyms":[{"name":"CNS leiomyosarcoma","type":"exact"},{"name":"central nervous system leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of CNS","type":"exact"},{"name":"leiomyosarcoma of central nervous system","type":"exact"},{"name":"leiomyosarcoma of the CNS","type":"exact"},{"name":"leiomyosarcoma of the central nervous system","type":"exact"}],"termid":"MONDO:0003349","xrefs":{"Monarch":{"xref_id":"0003349"}}}


id: PBO:0012558
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens XPO1","termid":"PBO:0012558"}


id: PBO:0053538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 540","termid":"PBO:0053538"}


id: PBO:0072566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRBP1 pseudogene 1","termid":"PBO:0072566"}


id: PBO:0042394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD302 molecule","termid":"PBO:0042394"}


id: FYPO:0007245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the meiotic spindle pole bodies are normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal spindle pole body","termid":"FYPO:0005379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic spindle pole body","synonyms":[{"name":"normal meiotic SPB","type":"exact"},{"name":"normal spindle pole body during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007245"}


id: GO:0052690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3,6-trichlorohydroquinone + 2 glutathione = 2,6-dichlorohydroquinone + glutathione disulfide + HCl.","definition_xrefs":["UM-BBD_reactionID:r0315","PMID:1459949","RHEA:56832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"trichloro-p-hydroquinone reductive dehalogenase activity","synonyms":[{"name":"pentaerythritol tetranitrate reductase activity","type":"related"},{"name":"tetrachlorohydroquinone reductive dehalogenase activity","type":"related"},{"name":"trichlorohydroquinone reductive dehalogenase activity","type":"exact"},{"name":"xenobiotic reductase activity","type":"broad"}],"termid":"GO:0052690"}


id: PBO:0031773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_G0_to_G1_transition","termid":"PBO:0031773"}


id: MONDO:0003602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant adipose tissue neoplasm of the intracranial region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intracranial liposarcoma","secondary_identifiers":["MEDGEN:232663","NCIT:C6973","UMLS:C1334242","DOID:5714"],"termid":"MONDO:0003602","xrefs":{"Monarch":{"xref_id":"0003602"}}}


id: PBO:0057444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 562","termid":"PBO:0057444"}


id: GO:0045540
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109312],"is_not":false,"summary":null,"term":"GO:0045540"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol metabolic process","termid":"GO:0090181"},{"relation_name":"is_a","term_name":"regulation of sterol biosynthetic process","termid":"GO:0106118"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"cholesterol biosynthetic process","termid":"GO:0006695"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of cholesterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1655829"],"synonyms":[{"name":"regulation of cholesterol anabolism","type":"exact"},{"name":"regulation of cholesterol biosynthesis","type":"exact"},{"name":"regulation of cholesterol formation","type":"exact"},{"name":"regulation of cholesterol synthesis","type":"exact"}],"termid":"GO:0045540","terms_by_termid":{"GO:0045540":null}}


id: GO:1904280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["PMID:24726328","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase V","termid":"GO:1904279"},{"relation_name":"negatively_regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription by RNA polymerase V","synonyms":[{"name":"down regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"down regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"down-regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"downregulation of transcription from RNA pol V promoter","type":"exact"},{"name":"downregulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"inhibition of transcription from RNA pol V promoter","type":"narrow"},{"name":"inhibition of transcription from RNA polymerase V promoter","type":"narrow"},{"name":"negative regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904280"}


id: GO:0071753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgM isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and in its circulating form complexed with J chain in polymeric forms. An IgM immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add","PMID:20176268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgM immunoglobulin complex","termid":"GO:0071753"}


id: GO:0060300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the activity of a molecule that controls the survival, growth, differentiation and effector function of tissues and cells.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cytokine activity","termid":"GO:0060300"}


id: PBO:0069517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 786, pseudogene","termid":"PBO:0069517"}


id: PBO:0003557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase Prs5 (predicted)","termid":"PBO:0003557"}


id: MONDO:0030705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the prostate gland caused by Trichomonas vaginalis.","definition_xrefs":["NCIT:C35176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichomoniasis","termid":"MONDO:0002154"},{"relation_name":"is_a","term_name":"prostatitis","termid":"MONDO:0005280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichomonas prostatitis","secondary_identifiers":["MEDGEN:102261","UMLS:C0153315","SCTID:71590000","ICD9:131.03"],"synonyms":[{"name":"Trichomonas prostatitis","type":"exact"},{"name":"Trichomonas vaginalis caused prostatitis (disease)","type":"exact"},{"name":"Trichomonas vaginalis prostatitis (disease)","type":"exact"},{"name":"trichomonal prostatitis","type":"exact"}],"termid":"MONDO:0030705","xrefs":{"Monarch":{"xref_id":"0030705"}}}


id: PBO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.26.5","termid":"PBO:0000968"}


id: PBO:0051136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-9","termid":"PBO:0051136"}


id: PBO:0064895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B'alpha","termid":"PBO:0064895"}


id: MONDO:0005594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of skin disorders including Stevens-Johnson syndrome/toxic epidermal necrolysis (SJS/TEN), drug reaction with eosinophilia and systemic symptoms (DRESS), acute generalized exanthematous pustulosis (AGEP), and generalized bullous fixed drug eruptions (GBFDE).","definition_xrefs":["PMID:29445753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"severe cutaneous adverse reaction","secondary_identifiers":["MedDRA:20000020","EFO:0006346","MEDGEN:1843455","UMLS:C5554042"],"synonyms":[{"name":"SCAR","type":"exact"}],"termid":"MONDO:0005594","xrefs":{"Monarch":{"xref_id":"0005594"}}}


id: PBO:0075156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 12","termid":"PBO:0075156"}


id: PBO:0060426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAB1 pseudogene 1","termid":"PBO:0060426"}


id: GO:1900736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipase C-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"}],"termid":"GO:1900736"}


id: PBO:0089170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin/calnexin homolog","termid":"PBO:0089170"}


id: PBO:0056322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K5 antisense RNA 2","termid":"PBO:0056322"}


id: GO:0033008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mast cell activation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mast cell activation","termid":"GO:0033005"},{"relation_name":"is_a","term_name":"regulation of mast cell activation involved in immune response","termid":"GO:0033006"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell activation involved in immune response","synonyms":[{"name":"positive regulation of mast cell activation during immune response","type":"related"}],"termid":"GO:0033008"}


id: MONDO:0008957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebrae, agenesis of","secondary_identifiers":["OMIM:214290","MESH:C562952","MEDGEN:140922","UMLS:C0432160"],"synonyms":[{"name":"cervical vertebrae, agenesis of","type":"exact"}],"termid":"MONDO:0008957","xrefs":{"Monarch":{"xref_id":"0008957"}}}


id: PBO:0031005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level","termid":"PBO:0031005"}


id: MONDO:0019681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sialidosis type 2","termid":"MONDO:0009738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"juvenile sialidosis type 2","secondary_identifiers":["GARD:19183","Orphanet:93399","MEDGEN:1825999","SCTID:111383007","UMLS:C5681598","icd11.foundation:1730484030"],"synonyms":[{"name":"dysmorphic sialidosis, juvenile form","type":"exact"}],"termid":"MONDO:0019681","xrefs":{"Monarch":{"xref_id":"0019681"}}}


id: GO:0009713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound biosynthetic process","synonyms":[{"name":"catechol anabolism","type":"related"},{"name":"catechol biosynthesis","type":"related"},{"name":"catechol biosynthetic process","type":"related"},{"name":"catechol formation","type":"related"},{"name":"catechol synthesis","type":"related"}],"termid":"GO:0009713"}


id: GO:0052072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of host salicylic acid-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host salicylic acid-mediated signal transduction pathway (obsolete GO:0052072)","synonyms":[{"name":"activation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related host salicylic acid-mediated signal transduction pathway","type":"narrow"},{"name":"activation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related host salicylic acid-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"stimulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"narrow"},{"name":"up regulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"up-regulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related host salicylic acid-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052072"}


id: MONDO:0044638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the hypopharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharyngeal squamous cell carcinoma","termid":"MONDO:0000536"},{"relation_name":"is_a","term_name":"hypopharyngeal carcinoma","termid":"MONDO:0005216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"hypopharynx squamous cell carcinoma","secondary_identifiers":["UMLS:C0280321","MEDGEN:79102","icd11.foundation:680629191","EFO:1001960","NCIT:C4043","Orphanet:494547","ONCOTREE:HPHSC","GARD:17907"],"synonyms":[{"name":"epidermoid carcinoma of hypopharynx","type":"exact"},{"name":"epidermoid carcinoma of the hypopharynx","type":"exact"},{"name":"hypopharyngeal epidermoid carcinoma","type":"exact"},{"name":"hypopharyngeal squamous cell carcinoma","type":"exact"},{"name":"hypopharyngeal throat squamous cell cancer","type":"exact"},{"name":"squamous cell carcinoma of hypopharynx","type":"exact"},{"name":"squamous cell carcinoma of the hypopharynx","type":"related"}],"termid":"MONDO:0044638","xrefs":{"Monarch":{"xref_id":"0044638"}}}


id: PBO:0079833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UMODL1 antisense RNA 1","termid":"PBO:0079833"}


id: PBO:0085039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonessential component of the TIM23 complex; interacts with the Translocase of the Outer Mitochondrial membrane (TOM complex) and with respiratory enzymes; may regulate the Translocase of the Inner Mitochondrial membrane (TIM23 complex) activity","termid":"PBO:0085039"}


id: GO:0110004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA methylation.","definition_xrefs":["GOC:vw","PMID:23074192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA methylation","termid":"GO:0110002"},{"relation_name":"is_a","term_name":"positive regulation of tRNA processing","termid":"GO:2000237"},{"relation_name":"positively_regulates","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"positive regulation of tRNA methylation","termid":"GO:0110004"}


id: PR:O14059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1672.01 gene.","definition_xrefs":["UniProtKB:O14059","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.01","synonyms":[{"name":"HolPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1672.01","type":"exact"}],"termid":"PR:O14059"}


id: GO:0052619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + L-glutamate + factor gamma-F420-1 = GDP + H+ + factor gamma-F420-2 + phosphate.","definition_xrefs":["MetaCyc:RXN-8081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme F420-0 gamma-glutamyl ligase activity","termid":"GO:0043773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"coenzyme F420-1:gamma-L-glutamate ligase activity","secondary_identifiers":["RHEA:30523","EC:6.3.2.34"],"termid":"GO:0052619"}


id: PATO:0002500
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed ventrolaterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventrolaterally orientation","synonyms":[{"name":"ventrolaterally directed","type":"exact"}],"termid":"PATO:0002500"}


id: MOD:01652
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with a sulfonyl halide compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}


id: GO:0030997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the two centrioles within a centrosome remain tightly paired; may be mediated by the assembly and disassembly of a proteinaceous linker.","definition_xrefs":["PMID:11076968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"},{"relation_name":"regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"}


id: MONDO:0005348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An irregularly shaped, elevated mark on the skin caused by deposits of excessive amounts of collagen during wound healing. It extends beyond the original boundaries of the wound and may enlarge progressively.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reactive cutaneous fibrous lesion","termid":"MONDO:0006603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keloid","secondary_identifiers":["MEDGEN:7197","icd11.foundation:2057714006","NCIT:C3145","UMLS:C0022548","EFO:0004212","SCTID:33659008","MESH:D007627","ICD9:701.4"],"termid":"MONDO:0005348","xrefs":{"Monarch":{"xref_id":"0005348"}}}


id: MOD:01706
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an isotope tagged reagent acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}


id: PBO:0067561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 714, pseudogene","termid":"PBO:0067561"}


id: MONDO:0017347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive diffuse large B-cell lymphoma frequently arising in the setting of HIV infection and characterized by the presence of large neoplastic cells resembling B-immunoblasts which have the immunophenotypic profile of plasma cells. Sites of involvement include the oral cavity, sinonasal cavity, skin, soft tissues, gastrointestinal tract, and bone.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"plasmablastic lymphoma","secondary_identifiers":["ICDO:9735/3","MESH:D000069293","icd11.foundation:803046659","Orphanet:289666","MedDRA:10065039","ICDO:9684/3","ONCOTREE:PLBL","DOID:0080779","SCTID:724648008","MEDGEN:483338","UMLS:C3472614","NCIT:C7224","GARD:12125"],"synonyms":[{"name":"PBL","type":"exact"},{"name":"PLBL","type":"related"},{"name":"Plasmablastic lymphoma","type":"exact"}],"termid":"MONDO:0017347","xrefs":{"Monarch":{"xref_id":"0017347"}}}


id: MONDO:0008958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated Klippel-Feil syndrome in which the cause of the disease is a mutation in the MEOX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Klippel-Feil syndrome","termid":"MONDO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Klippel-Feil syndrome 2, autosomal recessive","secondary_identifiers":["OMIM:214300","GARD:15151","UMLS:C1859209","MESH:C536888","DOID:0080590","MEDGEN:395201"],"synonyms":[{"name":"KFS2","type":"related"},{"name":"Kfs, autosomal recessive","type":"related"},{"name":"Klippel-FEIL syndrome 2, autosomal recessive","type":"related"},{"name":"Klippel-Feil syndrome 2, autosomal recessive","type":"exact"},{"name":"MEOX1 isolated Klippel-Feil syndrome","type":"exact"},{"name":"cervical vertebral fusion, autosomal recessive","type":"related"},{"name":"isolated Klippel-Feil syndrome caused by mutation in MEOX1","type":"exact"}],"termid":"MONDO:0008958","xrefs":{"Monarch":{"xref_id":"0008958"}}}


id: GO:1902116
data:
  {"annotated_genes":["SJAG_04638"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of organelle assembly.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"negatively_regulates","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of organelle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of organelle assembly","type":"exact"},{"name":"down-regulation of organelle assembly","type":"exact"},{"name":"downregulation of organelle assembly","type":"exact"},{"name":"inhibition of organelle assembly","type":"narrow"}],"termid":"GO:1902116","terms_by_termid":{"GO:1905560":null}}


id: PBO:0092017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glycine (ucc), mitochondrial","termid":"PBO:0092017"}


id: PBO:0004924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic nuclear protein implicated in meiotic chromosome segregation","termid":"PBO:0004924"}


id: PBO:0063758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB2 pseudogene 1","termid":"PBO:0063758"}


id: PBO:0074815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 15B","termid":"PBO:0074815"}


id: GO:0005897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-9; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-9 receptor, whereas the beta chain is shared with the receptors for several other interleukins.","definition_xrefs":["GOC:mah","PMID:10642536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"interleukin-9 receptor complex","synonyms":[{"name":"IL-9 receptor complex","type":"exact"}],"termid":"GO:0005897"}


id: GO:0019165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thiamine = ADP + 2 H+ + thiamine phosphate.","definition_xrefs":["EC:2.7.1.89","RHEA:12012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thiamine kinase activity","secondary_identifiers":["MetaCyc:THIKIN-RXN","KEGG_REACTION:R02134"],"synonyms":[{"name":"ATP:thiamin phosphotransferase activity","type":"related"},{"name":"ATP:thiamine phosphotransferase activity","type":"related"},{"name":"thiamin kinase (phosphorylating)","type":"related"},{"name":"thiamin kinase activity","type":"related"},{"name":"thiamin phosphokinase activity","type":"related"}],"termid":"GO:0019165"}


id: GO:0071292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silver (Ag+) ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to silver ion","termid":"GO:0010272"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to silver ion","termid":"GO:0071292"}


id: PBO:0056932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mirror-image polydactyly 1","termid":"PBO:0056932"}


id: GO:0000955
data:
  {"annotated_genes":["SJAG_02734","SJAG_04842","SJAG_03743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96764,88020,96763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce alcohols or carboxylic acids containing one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives, sometimes referred to as fusel acids, may be produced instead of alcohols.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02734":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"amino acid catabolic process via Ehrlich pathway","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000955","terms_by_termid":{"GO:0000949":null}}


id: GO:0050011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citramalyl-CoA = itaconyl-CoA + H2O.","definition_xrefs":["MetaCyc:ITACONYL-COA-HYDRATASE-RXN","EC:4.2.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"itaconyl-CoA hydratase activity","secondary_identifiers":["RHEA:13785"],"synonyms":[{"name":"citramalyl-CoA hydro-lyase (itaconyl-CoA-forming)","type":"related"},{"name":"citramalyl-CoA hydro-lyase activity","type":"related"},{"name":"itaconyl coenzyme A hydratase activity","type":"related"}],"termid":"GO:0050011"}


id: PBO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal tubular acidosis","termid":"PBO:0002089"}


id: SO:0000398
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U11 snRNA plays a role in splicing of the minor U12-dependent class of eukaryotic nuclear introns, similar to U1 snRNA in the major class spliceosome it base pairs to the conserved 5' splice site sequence.","definition_xrefs":["PMID:9622129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U11_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U11_snRNA"],"synonyms":[{"name":"U11 small nuclear RNA","type":"exact"},{"name":"U11 snRNA","type":"exact"},{"name":"small nuclear RNA U11","type":"exact"},{"name":"snRNA U11","type":"exact"}],"termid":"SO:0000398"}


id: GO:0000111
data:
  {"annotated_genes":["SJAG_01887","SJAG_01049"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87800,116584],"is_not":false,"summary":null,"term":"GO:0000111"}]},"cv_name":"cellular_component","definition":"One of several protein complexes involved in nucleotide-excision repair; possesses damaged DNA binding activity. In S. cerevisiae, it is composed of Rad4p and Rad23p.","definition_xrefs":["PMID:10915862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nucleotide-excision repair factor 2 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NEF2 complex","type":"exact"}],"termid":"GO:0000111","terms_by_termid":{"GO:0000111":null}}


id: PBO:0091030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp10","termid":"PBO:0091030"}


id: GO:0140644
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extracellular microbicidal structure composed of nuclear chromatin, histones and granular antimicrobial proteins. Histones and several neutrophil granule proteins associated with the DNA framework damage entrapped microorganisms.","definition_xrefs":["PMID:31172493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular membraneless organelle","termid":"GO:0043264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"neutrophil extracellular trap","synonyms":[{"name":"NET","type":"broad"}],"termid":"GO:0140644"}


id: PBO:0011135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER associated protein disulfide isomerase Pdi2","termid":"PBO:0011135"}


id: PBO:0087932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transketolase; catalyzes conversion of xylulose-5-phosphate and ribose-5-phosphate to sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate in the pentose phosphate pathway; needed for synthesis of aromatic amino acids; TKL2 has a paralog, TKL1, that arose from the whole genome duplication","termid":"PBO:0087932"}


id: PBO:0045643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 1","termid":"PBO:0045643"}


id: GO:0007117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bud portion of a cell that reproduces by budding irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"},{"relation_name":"part_of","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell bud growth","synonyms":[{"name":"bud growth","type":"broad"}],"termid":"GO:0007117"}


id: PBO:0081048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 4","termid":"PBO:0081048"}


id: GO:0032025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt ion (Co2+) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cobalt ion","termid":"GO:0032025"}


id: MOD:01551
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01551"}


id: PBO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid permease Per1","termid":"PBO:0002213"}


id: GO:0071296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotin","termid":"GO:0070781"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotin","synonyms":[{"name":"cellular response to Bios IIB","type":"exact"},{"name":"cellular response to coenzyme R","type":"exact"},{"name":"cellular response to vitamin B7","type":"exact"},{"name":"cellular response to vitamin H","type":"exact"}],"termid":"GO:0071296"}


id: PBO:0042948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 2","termid":"PBO:0042948"}


id: PBO:0064723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 59","termid":"PBO:0064723"}


id: PBO:0059312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L52","termid":"PBO:0059312"}


id: MONDO:1010135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Protoporphyria that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"porphyria, non-human animal","termid":"MONDO:1011418"},{"relation_name":"is_a","term_name":"liver disorder, non-human animal","termid":"MONDO:1012967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyria, non-human animal","secondary_identifiers":["OMIA:000836"],"termid":"MONDO:1010135","xrefs":{"Monarch":{"xref_id":"1010135"}}}


id: GO:0045729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phase of elevated metabolic activity, during which oxygen consumption increases, that occurs at fertilization. An enhanced uptake of oxygen leads to the production of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals. Capacitation, a necessary prerequisite event to successful fertilization, can be induced by reactive oxygen species in vitro; hydrogen peroxide is used as an extracellular oxidant to cross-link the protective surface envelopes.","definition_xrefs":["ISBN:0198506732","PMID:2537493","PMID:9013127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory burst","termid":"GO:0045730"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst at fertilization","synonyms":[{"name":"metabolic burst at fertilization","type":"exact"},{"name":"oxidative burst at fertilization","type":"exact"}],"termid":"GO:0045729"}


id: PBO:0080669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 21, pseudogene","termid":"PBO:0080669"}


id: PBO:0086451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane glycoprotein; has strong similarity to Vth1p and Pep1p/Vps10p; may be involved in vacuolar protein sorting","termid":"PBO:0086451"}


id: MONDO:0012966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microvascular complications of diabetes, susceptibility in which the cause of the disease is a mutation in the IL1RN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvascular complications of diabetes, susceptibility","termid":"MONDO:0000065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvascular complications of diabetes, susceptibility to, 4","secondary_identifiers":["OMIM:612628","UMLS:C2675112","MEDGEN:382527"],"synonyms":[{"name":"IL1RN microvascular complications of diabetes, susceptibility","type":"exact"},{"name":"MVCD4","type":"related"},{"name":"microvascular complications of diabetes 4","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility caused by mutation in IL1RN","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to, 4","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to, type 4","type":"exact"},{"name":"nephropathy, diabetic, susceptibility to","type":"related"}],"termid":"MONDO:0012966","xrefs":{"Monarch":{"xref_id":"0012966"}}}


id: GO:0021625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the oculomotor nerve to attain its fully functional state. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:jid","GOC:cls","ISBN:0838580343","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"oculomotor nerve development","termid":"GO:0021557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve maturation","synonyms":[{"name":"CN III maturation","type":"related"}],"termid":"GO:0021625"}


id: PBO:0078249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 25/OR9-2 (pseudogene)","termid":"PBO:0078249"}


id: PBO:0082091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase; catalyzes synthesis of fructose-2,6-bisphosphate; inhibited by phosphoenolpyruvate and sn-glycerol 3-phosphate, expression induced by glucose and sucrose, transcriptional regulation involves protein kinase A","termid":"PBO:0082091"}


id: PBO:0079223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 3","termid":"PBO:0079223"}


id: GO:0048280
data:
  {"annotated_genes":["SJAG_00557","SJAG_01633","SJAG_04023","SJAG_03670"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95057,107493,109271,117065],"is_not":false,"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00557":null,"SJAG_01633":null,"SJAG_03670":null,"SJAG_04023":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"vesicle fusion with Golgi apparatus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048280","terms_by_termid":{"GO:0048280":null}}


id: PBO:0058055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4276","termid":"PBO:0058055"}


id: GO:0036204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abieta-7,13-dien-18-ol + NADPH + H+ + O2 = abieta-7,13-dien-18-al + NADP+ + 2 H2O. This is a two step reaction. The first step is: abieta-7,13-dien-18-ol + NADPH + H+ + O2 = abieta-7,13-dien-18,18-diol + + NADP+ + H2O. The second step is a spontaneous reaction: abieta-7,13-dien-18,18-diol = abieta-7,13-dien-18-al + H2O.","definition_xrefs":["EC:1.14.14.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"abieta-7,13-dien-18-ol hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-12799","KEGG_REACTION:R06354","RHEA:26221"],"termid":"GO:0036204"}


id: PBO:0026918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_rRNA_modification","termid":"PBO:0026918"}


id: PBO:0078996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trRNA-Thr (anticodon AGT) 3-1","termid":"PBO:0078996"}


id: PBO:0062845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclastogenesis associated transmembrane protein 1","termid":"PBO:0062845"}


id: GO:0009063
data:
  {"annotated_genes":["SJAG_04145","SJAG_04842","SJAG_00495","SJAG_03743","SJAG_04827","SJAG_00674","SJAG_03293","SJAG_03290","SJAG_03641","SJAG_02235","SJAG_00493","SJAG_03861","SJAG_00937","SJAG_02734","SJAG_01271","SJAG_02901","SJAG_00714","SJAG_00944","SJAG_01903","SJAG_03434","SJAG_02496","SJAG_02450","SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[112646,96850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[106239,96851,112647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[96764,96763,88020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[111264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[114191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[87118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[87937,86960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"},{"annotations":[79212,91215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[97363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[86946,112472,88187,95907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[110685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[106587,117443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[93711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[106245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006572"},{"annotations":[107548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00493":null,"SJAG_00495":null,"SJAG_00674":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_00944":null,"SJAG_01271":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02450":null,"SJAG_02496":null,"SJAG_02734":null,"SJAG_02901":null,"SJAG_03290":null,"SJAG_03293":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03743":null,"SJAG_03861":null,"SJAG_04145":null,"SJAG_04827":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino acid breakdown","type":"exact"},{"name":"amino acid catabolism","type":"exact"},{"name":"amino acid degradation","type":"exact"},{"name":"cellular amino acid catabolic process","type":"exact"}],"termid":"GO:0009063","terms_by_termid":{"GO:0000949":null,"GO:0006533":null,"GO:0006538":null,"GO:0006546":null,"GO:0006567":null,"GO:0006572":null,"GO:0006574":null,"GO:0009450":null,"GO:0010121":null,"GO:0010133":null,"GO:0019464":null,"GO:0019478":null,"GO:0019544":null,"GO:0019547":null,"GO:0036088":null,"GO:0042853":null}}


id: PBO:0028252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_G1/S_transition_delay_following_nitrogen_starvation-induced_G1_phase_arrest","termid":"PBO:0028252"}


id: GO:1901354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-canavanine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-canavanine","termid":"GO:1901354"}


id: MONDO:0011307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in an autosomal dominant mutation of SCZD2 on chromosome 11q14-q21.","definition_xrefs":["DOID:0070078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 2","secondary_identifiers":["UMLS:C1864010","MEDGEN:350323","OMIM:603342"],"synonyms":[{"name":"SCZD2","type":"exact"},{"name":"schizophrenia 2","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 11Q-related","type":"related"}],"termid":"MONDO:0011307","xrefs":{"Monarch":{"xref_id":"0011307"}}}


id: MONDO:0009969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal-genital-middle ear anomalies","secondary_identifiers":["UMLS:C1849432","OMIM:267400","MEDGEN:341454","MESH:C564849","Orphanet:1092","GARD:4664"],"synonyms":[{"name":"renal genital middle ear anomalies","type":"related"},{"name":"renal, genital, and middle EAR anomalies","type":"related"}],"termid":"MONDO:0009969","xrefs":{"Monarch":{"xref_id":"0009969"}}}


id: GO:0034921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-4,5-dihydroxy-4,5-dihydropyrene = 4,5-dihydroxypyrene + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-4,5-dihydroxy-4,5-dihydropyrene dehydrogenase activity (obsolete GO:0034921)","termid":"GO:0034921"}


id: GO:0036059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nephrocyte diaphragm, a specialized cell-cell junction found between nephrocytes of the insect kidney.","definition_xrefs":["GOC:sart","GOC:mtg_kidney_jan10","PMID:18971929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction assembly","termid":"GO:0034333"},{"relation_name":"is_a","term_name":"filtration diaphragm assembly","termid":"GO:0036058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"nephrocyte diaphragm assembly","termid":"GO:0036059"}


id: GO:1901754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of vitamin D3.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D catabolic process","termid":"GO:0042369"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629","GO:0006766"],"is_obsolete":false,"name":"vitamin D3 catabolic process","synonyms":[{"name":"calciol breakdown","type":"exact"},{"name":"calciol catabolic process","type":"exact"},{"name":"calciol catabolism","type":"exact"},{"name":"calciol degradation","type":"exact"},{"name":"cholecalciferol catabolic process","type":"exact"},{"name":"cholecalciferol catabolism","type":"exact"},{"name":"vitamin D3 breakdown","type":"exact"},{"name":"vitamin D3 catabolism","type":"exact"},{"name":"vitamin D3 degradation","type":"exact"}],"termid":"GO:1901754"}


id: MONDO:0016303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dextro-looped transposition of the great arteries","termid":"MONDO:0019443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenitally uncorrected transposition of the great arteries with cardiac malformation","secondary_identifiers":["Orphanet:216729","GARD:20503","NANDO:1200701","MEDGEN:1843053","UMLS:C5679811"],"synonyms":[{"name":"TGA with cardiac malformation","type":"exact"},{"name":"congenitally uncorrected transposition of the great vessels with cardiac malformation","type":"exact"}],"termid":"MONDO:0016303","xrefs":{"Monarch":{"xref_id":"0016303"}}}


id: FYPO:0004412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase is the stage of mitosis in which chromosomes separate and migrate towards the poles of the spindle.","definition_xrefs":["GO:1902967","GO:1990023","GO:0000090","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle midzone","termid":"FYPO:0003484"},{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle during mitosis","termid":"FYPO:0004754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone during anaphase","synonyms":[{"name":"abolished protein localization to spindle midzone during anaphase during mitotic cell cycle","type":"exact"},{"name":"protein absent from mitotic spindle midzone during anaphase","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished during anaphase","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished during anaphase","type":"exact"},{"name":"protein localization to spindle midzone abolished during anaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0004412"}


id: PBO:0076397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 1","termid":"PBO:0076397"}


id: GO:0033744
data:
  {"annotated_genes":["SJAG_00419"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036456"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin.","definition_xrefs":["EC:1.8.4.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-methionine:thioredoxin-disulfide S-oxidoreductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:19993","GO:0000317","KEGG_REACTION:R07606","MetaCyc:1.8.4.13-RXN"],"synonyms":[{"name":"L-methionine-(S)-S-oxide reductase activity","type":"narrow"},{"name":"L-methionine:oxidized-thioredoxin S-oxidoreductase activity","type":"related"},{"name":"acetylmethionine sulfoxide reductase activity","type":"related"},{"name":"fSMsr","type":"related"},{"name":"free-methionine (S)-S-oxide reductase activity","type":"related"},{"name":"methionine sulfoxide reductase activity","type":"broad"},{"name":"methionine-S-oxide reductase activity","type":"exact"},{"name":"methyl sulfoxide reductase I and II activity","type":"related"}],"termid":"GO:0033744","terms_by_termid":{"GO:0036456":null}}


id: PBO:0073530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 3","termid":"PBO:0073530"}


id: GO:0050600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11,12-saturated fatty acyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (11E)-delta11-fatty acyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acyl-CoA 11-(E)-desaturase activity","secondary_identifiers":["MetaCyc:1.14.99.31-RXN","EC:1.14.19.24"],"synonyms":[{"name":"acyl-CoA delta11-desaturase activity","type":"broad"},{"name":"myristoyl-CoA 11-(E) desaturase activity","type":"narrow"}],"termid":"GO:0050600"}


id: PBO:0081932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1B","termid":"PBO:0081932"}


id: PBO:0085801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains transmembrane domains; involved in secretion of proteins that lack classical secretory signal sequences; component of the detergent-insoluble glycolipid-enriched complexes (DIGs); NCE102 has a paralog, FHN1, that arose from the whole genome duplication","termid":"PBO:0085801"}


id: PBO:0058248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4536-1","termid":"PBO:0058248"}


id: PBO:0013462
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses rad3delta or rad3-36 sensitivity to UV and hydroxyurea","termid":"PBO:0013462"}


id: GO:0043955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypropionate + ATP + CoA = 3-hydroxypropionyl-CoA + AMP + diphosphate.","definition_xrefs":["GOC:jl","PMID:11821399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"3-hydroxypropionyl-CoA synthetase activity","secondary_identifiers":["RHEA:26534","EC:6.2.1.36"],"synonyms":[{"name":"3-hydroxy propionyl-CoA synthetase activity","type":"exact"},{"name":"AMP-dependent synthetase and ligase","type":"broad"},{"name":"AMP-dependent synthetase and ligase:Enoyl-CoA hydratase/isomerase","type":"broad"},{"name":"acetyl-coenzyme A synthetase","type":"broad"},{"name":"acetyl-coenzyme A synthetase/GroES-like domain","type":"narrow"},{"name":"enoyl-CoA hydratase/isomerase","type":"broad"}],"termid":"GO:0043955"}


id: GO:0042117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a monocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:mgi_curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte activation","termid":"GO:0042117"}


id: PBO:0017868
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lissencephaly","termid":"PBO:0017868"}


id: PBO:0089315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex assembly protein Emi5","termid":"PBO:0089315"}


id: PBO:0069401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 661, pseudogene","termid":"PBO:0069401"}


id: GO:0070601
data:
  {"annotated_genes":["SJAG_01805","SJAG_01082","SJAG_00229","SJAG_03926","SJAG_04126","SJAG_03418","SJAG_04699","SJAG_01601","SJAG_00600","SJAG_04259","SJAG_03681","SJAG_03989"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100765,103981,112670,93299,107288,113942,115345,101286,113223,98627],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[90435,69990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051754"},{"annotations":[98629,90437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071962"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the length of the centromeric region of the chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03418":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"centromeric sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sister chromatid cohesion at centromere","type":"exact"}],"termid":"GO:0070601","terms_by_termid":{"GO:0051754":null,"GO:0071962":null,"GO:1990813":null}}


id: GO:0022885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a bacteriocin from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"bacteriocin transmembrane transporter activity","termid":"GO:0022885"}


id: FYPO:0006742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more MluI cell cycle box factor elements (MCBs) is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc.","definition_xrefs":["PMID:30134042","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription from MCB promoter","synonyms":[{"name":"normal expression of MBF target genes","type":"related"},{"name":"normal transcription from MCB promoter during mitotic cell cycle","type":"related"},{"name":"normal transcription from MCB promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0006742"}


id: PBO:0056866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated monooxygenase, calponin and LIM domain containing 2","termid":"PBO:0056866"}


id: PBO:0067237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 308, pseudogene","termid":"PBO:0067237"}


id: MONDO:0019072
data:
  {"annotated_genes":["SJAG_03363","SJAG_05194","SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[86564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[86501,86502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[85406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[86440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"A cholestasis characterized by impairment of the bile flow caused by obstruction located in the liver.","definition_xrefs":["DOID:1852"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic metabolic liver disease (obsolete MONDO:0015115)","termid":"MONDO:0015115"},{"relation_name":"excluded_subClassOf","term_name":"pregnancy disorder","termid":"MONDO:0024575"},{"relation_name":"is_a","term_name":"cholestasis","termid":"MONDO:0001751"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"intrahepatic cholestasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:3042","MESH:D002780","SCTID:235888006","UMLS:C0008372"],"termid":"MONDO:0019072","terms_by_termid":{"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013995":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0019072"}}}


id: GO:1903983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases the length of a microvillus.","definition_xrefs":["PMID:22114352","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"regulation of microvillus length","termid":"GO:0032532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microvillus length","synonyms":[{"name":"activation of regulation of microvillus length","type":"narrow"},{"name":"up regulation of regulation of microvillus length","type":"exact"},{"name":"up-regulation of regulation of microvillus length","type":"exact"},{"name":"upregulation of regulation of microvillus length","type":"exact"}],"termid":"GO:1903983"}


id: GO:0045987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"is_a","term_name":"positive regulation of muscle contraction","termid":"GO:0045933"},{"relation_name":"positively_regulates","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle contraction","synonyms":[{"name":"activation of smooth muscle contraction","type":"narrow"},{"name":"stimulation of smooth muscle contraction","type":"narrow"},{"name":"up regulation of smooth muscle contraction","type":"exact"},{"name":"up-regulation of smooth muscle contraction","type":"exact"},{"name":"upregulation of smooth muscle contraction","type":"exact"}],"termid":"GO:0045987"}


id: PBO:0065065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 3, pro eosinophil major basic protein 2","termid":"PBO:0065065"}


id: MONDO:0021662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the intrahepatic or extrahepatic bile ducts. Representative examples of benign neoplasms include bile duct adenoma and extrahepatic bile duct lipoma. Representative examples of malignant neoplasms include intrahepatic and extrahepatic cholangiocarcinoma.","definition_xrefs":["NCIT:C2898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"},{"relation_name":"is_a","term_name":"biliary tract neoplasm","termid":"MONDO:0005304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile duct neoplasm","secondary_identifiers":["MESH:D001650","MEDGEN:14114","UMLS:C0005396"],"synonyms":[{"name":"bile duct neoplasm","type":"exact"},{"name":"bile duct neoplasm (disease)","type":"exact"},{"name":"bile duct tumor","type":"exact"},{"name":"bile duct tumour","type":"exact"},{"name":"intrahepatic and extrahepatic bile duct neoplasm","type":"exact"},{"name":"intrahepatic and extrahepatic bile duct tumor","type":"exact"},{"name":"intrahepatic and extrahepatic bile duct tumour","type":"exact"},{"name":"neoplasm of bile duct","type":"exact"},{"name":"tumor of bile duct","type":"exact"},{"name":"tumour of bile duct","type":"exact"}],"termid":"MONDO:0021662","xrefs":{"Monarch":{"xref_id":"0021662"}}}


id: PBO:0061912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily B member 1","termid":"PBO:0061912"}


id: PBO:0092018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine (uaa), mitochondrial","termid":"PBO:0092018"}


id: MONDO:0001349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dental caries","termid":"MONDO:0005276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontoclasia","secondary_identifiers":["DOID:11736","ICD9:521.05","MEDGEN:574111","icd11.foundation:43527109","SCTID:196305005","UMLS:C0341004"],"termid":"MONDO:0001349","xrefs":{"Monarch":{"xref_id":"0001349"}}}


id: PBO:0085075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-succinyl-5-aminoimidazole-4-carboxamide ribotide synthetase; required for 'de novo' purine nucleotide biosynthesis; red pigment accumulates in mutant cells deprived of adenine; protein abundance increases in response to DNA replication stress","termid":"PBO:0085075"}


id: PBO:0058453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5092","termid":"PBO:0058453"}


id: PBO:0085021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinic acid mononucleotide adenylyltransferase; catalyzes the transfer of the adenylyl moiety of ATP to nicotinamide mononucleotide to form NAD; involved in de novo and salvage synthesis of NAD(+); homolog of human NMNAT; NMA2 has a paralog, NMA1, that arose from the whole genome duplication","termid":"PBO:0085021"}


id: GO:0048464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the flower calyx over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower calyx development","termid":"GO:0048464"}


id: MONDO:1010270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alkaptonuria that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaptonuria, non-human animal","secondary_identifiers":["OMIA:001243"],"termid":"MONDO:1010270","xrefs":{"Monarch":{"xref_id":"1010270"}}}


id: SO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"9 nucleotide recombination site (e.g. ACAAAAACC), part of V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000562"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_nonamer","synonyms":[{"name":"V nonamer","type":"exact"},{"name":"V-NONAMER","type":"exact"}],"termid":"SO:0000536"}


id: MONDO:0016290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome is characterized by major seizures, dysmorphic features (round face, bulbous nose, wide mouth, prominent philtrum), pes planus, psychomotor retardation and obesity. It has been described in five children (three boys and two girls, one of whom died in infancy) from two unrelated Mexican families. This condition is likely to be transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:2139"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hernández-Aguirre Negrete syndrome","secondary_identifiers":["GARD:3491","MEDGEN:419481","MESH:C538112","UMLS:C2931736","SCTID:721146009"],"synonyms":[{"name":"Ehlers-Danlos syndrome with progeroid facies and mild intellectual disability","type":"related"},{"name":"Ehlers-Danlos syndrome with progeroid facies and mild mental retardation","type":"related"},{"name":"intellectual disability-epilepsy-bulbous nose syndrome","type":"exact"}],"termid":"MONDO:0016290","xrefs":{"Monarch":{"xref_id":"0016290"}}}


id: GO:0032612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-1 production","secondary_identifiers":["GO:0042222","GO:0050701"],"synonyms":[{"name":"IL-1 production","type":"exact"},{"name":"interleukin-1 biosynthetic process","type":"narrow"},{"name":"interleukin-1 secretion","type":"narrow"}],"termid":"GO:0032612"}


id: PBO:0025471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-L ortholog Fta1","termid":"PBO:0025471"}


id: PBO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no detectable long open reading frame","termid":"PBO:0000063"}


id: PBO:0054554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1955","termid":"PBO:0054554"}


id: PBO:0045671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 intermediate chain 2","termid":"PBO:0045671"}


id: FYPO:0005033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein phosphorylation during nitrogen starvation","synonyms":[{"name":"abnormal protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"abnormal protein phosphorylation during nitrogen depletion","type":"exact"},{"name":"abnormal protein phosphorylation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0005033"}


id: PBO:0046385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelium and lymphocyte associated ASCH domain 2","termid":"PBO:0046385"}


id: PBO:0084438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltase (alpha-D-glucosidase); encoded within the complex locus MAL2","termid":"PBO:0084438"}


id: MONDO:0010445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete McLeod syndrome (obsolete MONDO:0010445)","termid":"MONDO:0010445","xrefs":{"Monarch":{"xref_id":"0010445"}}}


id: PBO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 19A","termid":"PBO:0044739"}


id: PBO:0029723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_nocodazole","termid":"PBO:0029723"}


id: GO:0048012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a hepatocyte growth factor receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hepatocyte growth factor receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-8852405"],"synonyms":[{"name":"HGF receptor signaling pathway","type":"exact"},{"name":"HGF receptor signalling pathway","type":"exact"},{"name":"Met signaling pathway","type":"narrow"}],"termid":"GO:0048012"}


id: PATO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition not to invade surrounding tissues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, non-invasive","termid":"PATO:0002132"}


id: MONDO:0014098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"CIDEC-related familial partial lipodystrophy","secondary_identifiers":["Orphanet:435651","MEDGEN:815270","GARD:13125","UMLS:C3808940","DOID:0070203","OMIM:615238"],"synonyms":[{"name":"CIDEC-related FPLD","type":"exact"},{"name":"CIDEC-related familial partial lipodystrophy","type":"exact"},{"name":"FPLD5","type":"exact"},{"name":"lipodystrophy, familial partial, associated with Cidec mutations","type":"related"},{"name":"lipodystrophy, familial partial, type 5","type":"related"}],"termid":"MONDO:0014098","xrefs":{"Monarch":{"xref_id":"0014098"}}}


id: PBO:0087579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the anaphase-promoting complex (APC); APC is an E3 ubiquitin ligase that regulates the metaphase-anaphase transition and exit from mitosis; required for activation of the daughter-specific gene expression and spore wall maturation","termid":"PBO:0087579"}


id: PBO:0081674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 595","termid":"PBO:0081674"}


id: GO:0047686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aryl sulfate + a phenol = a phenol + an aryl sulfate.","definition_xrefs":["MetaCyc:ARYLSULFATE-SULFOTRANSFERASE-RXN","EC:2.8.2.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"arylsulfate sulfotransferase activity","secondary_identifiers":["RHEA:51072"],"synonyms":[{"name":"ASST","type":"related"},{"name":"arylsulfate-phenol sulfotransferase activity","type":"related"},{"name":"arylsulfate:phenol sulfotransferase activity","type":"related"},{"name":"arylsulfotransferase","type":"broad"},{"name":"arylsulphate sulphotransferase activity","type":"exact"}],"termid":"GO:0047686"}


id: PATO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's lacking sharp straight-edged teeth pointing to the apex.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unserrated","termid":"PATO:0001975"}


id: PATO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration of temperature which is greater relative to the normal or average in respect to the quality of temperature of enduring or continuing in time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased duration","termid":"PATO:0000498"},{"relation_name":"is_a","term_name":"duration of temperature","termid":"PATO:0001310"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased duration of temperature","synonyms":[{"name":"high duration of temperature","type":"exact"}],"termid":"PATO:0001312"}


id: MONDO:0016550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital primary megaureter","termid":"MONDO:0018960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital primary megaureter, obstructed form","secondary_identifiers":["Orphanet:238646","UMLS:C5680936","icd11.foundation:342813504","MEDGEN:1842695","GARD:20640"],"termid":"MONDO:0016550","xrefs":{"Monarch":{"xref_id":"0016550"}}}


id: MONDO:0001737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome of generalized rigidity with muscle spasms and seizures in the neonatal period resulting from Clostridium tetani toxin production.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetanus","termid":"MONDO:0005526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetanus neonatorum","secondary_identifiers":["icd11.foundation:2085616610","MEDGEN:575516","DOID:13521","ICD10CM:A33","NCIT:C116814","ICD9:771.3","UMLS:C0343312","SCTID:43424001"],"synonyms":[{"name":"neonatal tetanus","type":"exact"}],"termid":"MONDO:0001737","xrefs":{"Monarch":{"xref_id":"0001737"}}}


id: PBO:0082496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of ADA and SAGA histone acetyltransferase complexes; modifies N-terminal lysines on histones H2B and H3; acetylates Rsc4p, a subunit of the RSC chromatin-remodeling complex, altering replication stress tolerance; relocalizes to the cytosol in response to hypoxia; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; greater involvement in repression of RNAPII-dependent transcription than in activation","termid":"PBO:0082496"}


id: PBO:0028198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_beta-glucanase","termid":"PBO:0028198"}


id: PBO:0031724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiotic_recombination","termid":"PBO:0031724"}


id: MONDO:0030880
data:
  {"annotated_genes":["SJAG_01780"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85230],"is_not":false,"summary":null,"term":"MONDO:0030880"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01780":null},"genotype_count":0,"is_obsolete":false,"name":"mandibuloacral dysplasia progeroid syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1741713","Orphanet:647667","UMLS:C5436867","OMIM:619127"],"synonyms":[{"name":"MDPS","type":"exact"},{"name":"mandibuloacral dysplasia associated to MTX2","type":"exact"}],"termid":"MONDO:0030880","terms_by_termid":{"MONDO:0030880":null},"xrefs":{"Monarch":{"xref_id":"0030880"}}}


id: GO:0044557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of smooth muscle contraction is reduced. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"relaxation of smooth muscle","synonyms":[{"name":"smooth muscle relaxation","type":"exact"}],"termid":"GO:0044557"}


id: PBO:0046426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B1","termid":"PBO:0046426"}


id: MONDO:0004603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagenopathy","termid":"MONDO:0004603","xrefs":{"Monarch":{"xref_id":"0004603"}}}


id: GO:0051212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vanadium ion (V).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"vanadium ion binding","synonyms":[{"name":"V ion binding","type":"exact"}],"termid":"GO:0051212"}


id: GO:0002593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation via MHC class Ib","synonyms":[{"name":"down regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"down-regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"downregulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"inhibition of antigen processing and presentation via MHC class Ib","type":"narrow"}],"termid":"GO:0002593"}


id: MONDO:0007569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythema nodosum, familial","secondary_identifiers":["MEDGEN:377045","OMIM:132990","UMLS:C1851503","MESH:C535510"],"synonyms":[{"name":"erythema nodosum, familial","type":"exact"},{"name":"familial erythema nodosum","type":"related"}],"termid":"MONDO:0007569","xrefs":{"Monarch":{"xref_id":"0007569"}}}


id: GO:0036426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,octacis-undecaprenyl phosphate + GDP-alpha-D-mannose = D-mannosyl undecaprenyl phosphate+ GDP.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undecaprenyl-phosphate mannosyltransferase activity","termid":"GO:0047267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"ditrans, polycis-undecaprenyl-phosphate mannosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.54-RXN","KEGG_REACTION:R07257"],"termid":"GO:0036426"}


id: FYPO:0002067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population grows more slowly than normal when the population has been in stationary phase and is then placed in conditions that allow recovery.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"slow vegetative cell population growth","termid":"FYPO:0001234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"slow cell population growth during recovery from stationary phase","termid":"FYPO:0002067"}


id: MONDO:0016321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary interstitial glycogenosis (PIG) is a rare non-lethal pediatric form of interstitial lung disease (ILD).","definition_xrefs":["Orphanet:217557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to infancy","termid":"MONDO:0017019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary interstitial glycogenosis","secondary_identifiers":["ICD10CM:J84.842","GARD:20516","icd11.foundation:1386580655","MEDGEN:838075","SCTID:707551007","UMLS:C3161106"],"synonyms":[{"name":"PIG","type":"exact"},{"name":"infantile cellular interstitial pneumonitis","type":"exact"},{"name":"pig","type":"exact"}],"termid":"MONDO:0016321","xrefs":{"Monarch":{"xref_id":"0016321"}}}


id: FYPO:0004568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the mitotic or meiotic spindle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spindle","termid":"FYPO:0004568"}


id: PBO:0064702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 38","termid":"PBO:0064702"}


id: SO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence TTTRTTTACA, bound by transcription factors with a forkhead DNA-binding domain.","definition_xrefs":["PMID:15195092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead_motif","synonyms":[{"name":"forkhead motif","type":"exact"}],"termid":"SO:0001847"}


id: PBO:0064714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 50","termid":"PBO:0064714"}


id: PBO:0017927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc15","termid":"PBO:0017927"}


id: SO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A retrotransposon without long terminal repeat sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon","termid":"SO:0000180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_LTR_retrotransposon","synonyms":[{"name":"non LTR retrotransposon","type":"exact"}],"termid":"SO:0000189"}


id: MONDO:0005048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An insulin-producing neuroendocrine tumor arising from the beta cells of the pancreas. It may or may not be associated with inappropriate secretion of insulin and an associated clinical syndrome.","definition_xrefs":["NCIT:C3140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic insulin-producing neuroendocrine tumor","secondary_identifiers":["Orphanet:97279","EFO:0000549","ICDO:8151/0","GARD:3010","ICDO:8151/1","MEDGEN:1844884","UMLS:C5848150"],"synonyms":[{"name":"Beta cell tumor","type":"exact"},{"name":"Beta cell tumor of pancreas","type":"exact"},{"name":"Beta cell tumor of the pancreas","type":"exact"},{"name":"Beta cell tumour","type":"exact"},{"name":"Beta cell tumour of pancreas","type":"exact"},{"name":"Beta cell tumour of the pancreas","type":"exact"},{"name":"beta cell neoplasm","type":"exact"},{"name":"beta cell tumor of the pancreas","type":"exact"},{"name":"beta cell tumour of the pancreas","type":"exact"},{"name":"insulin-producing islet cell tumor","type":"exact"},{"name":"insulin-producing islet cell tumour","type":"exact"},{"name":"insulin-producing tumor of islet cells","type":"exact"},{"name":"insulin-producing tumor of the islet cells","type":"exact"},{"name":"insulin-producing tumour of islet cells","type":"exact"},{"name":"insulin-producing tumour of the islet cells","type":"exact"},{"name":"pancreatic Beta cell tumor","type":"exact"},{"name":"pancreatic Beta cell tumour","type":"exact"},{"name":"pancreatic insulin producing NET","type":"exact"},{"name":"pancreatic insulin producing neoplasm","type":"exact"},{"name":"pancreatic insulin producing tumor","type":"exact"},{"name":"pancreatic insulin producing tumour","type":"exact"},{"name":"pancreatic insulin-producing neuroendocrine tumor","type":"exact"},{"name":"pancreatic insulin-producing tumor","type":"exact"},{"name":"pancreatic insulin-producing tumour","type":"exact"}],"termid":"MONDO:0005048","xrefs":{"Monarch":{"xref_id":"0005048"}}}


id: PATO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000421 nutritional value (obsolete PATO:0000421)","termid":"PATO:0000421"}


id: FYPO:0006306
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[118981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[118780],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[118969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[118784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[118795,118917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[118903],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[119002],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[118540,118970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[118781],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which an actin filament-based process, i.e. any process that depends upon or alters the actin cytoskeleton, is abnormal.","definition_xrefs":["GO:0030029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04280","SJAG_03596","SJAG_02392","SJAG_01143","SJAG_04522"],"name":"abnormal actin filament-based process","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_03596","SJAG_02392","SJAG_04522","SJAG_04280","SJAG_04703","SJAG_02592","SJAG_01143"],"single_locus_genotype_uniquenames":["sty1delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","for3delta","pom1delta","mid1delta","rga4delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal actin filament-based process during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament-based process during vegetative growth","type":"exact"},{"name":"abnormal microfilament-based process","type":"related"}],"termid":"FYPO:0006306","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0028219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell_during_cellular_response_to_salt_stress","termid":"PBO:0028219"}


id: GO:0021971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after exiting the basilar pons through the medullary pyramid in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","PMID:9878731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the medullary pyramid","synonyms":[{"name":"corticospinal neuron axon pathfinding through the medullary pyramid","type":"exact"}],"termid":"GO:0021971"}


id: MONDO:0045046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of thyroid hormone metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inherited thyroid metabolism disease","secondary_identifiers":["ICD9:246.8","UMLS:C0271824","MEDGEN:543589","SCTID:36985004"],"synonyms":[{"name":"inborn error of thyroid hormone metabolic process","type":"exact"},{"name":"inborn thyroid hormone metabolic process disorder","type":"exact"},{"name":"inherited disorder of thyroid metabolism","type":"exact"},{"name":"rare inborn error of thyroid hormone metabolic process","type":"exact"}],"termid":"MONDO:0045046","xrefs":{"Monarch":{"xref_id":"0045046"}}}


id: GO:0071364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epidermal growth factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to epidermal growth factor","termid":"GO:0070849"},{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to epidermal growth factor stimulus","synonyms":[{"name":"cellular response to EGF stimulus","type":"exact"}],"termid":"GO:0071364"}


id: PATO:0002395
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned away from the axis of an organism.","definition_xrefs":["PATOC:EH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalized abaxially","termid":"PATO:0002395"}


id: PBO:0044411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily G member 2, pseudogene","termid":"PBO:0044411"}


id: MONDO:0015646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Orgasm-induced seizures is a rare neurologic disease characterized by complex partial seizures with or without secondary generalization, or idiopathic primarily generalized epilepsy, triggered by sexual orgasm. Seizures usually start immediately, shortly after or a few hours after the achievement of orgasm, last a few seconds or minutes, and are followed, in very rare cases, by intense migraine.","definition_xrefs":["Orphanet:166421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex epilepsy","termid":"MONDO:0017768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"orgasm-induced seizures","secondary_identifiers":["MEDGEN:1633277","GARD:20079","UMLS:C4706598"],"termid":"MONDO:0015646","xrefs":{"Monarch":{"xref_id":"0015646"}}}


id: PR:Q10356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein DJ-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02092","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase DJ-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.03c","secondary_identifiers":["UniProtKB:Q10356"],"synonyms":[{"name":"Spom972h-PARK7","type":"exact"},{"name":"heat shock protein 31 homolog 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein DJ-1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10356"}


id: GO:1905838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telomeric D-loop disassembly.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:nc","GOC:TermGenie","PMID:15200954","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"regulates","term_name":"telomeric D-loop disassembly","termid":"GO:0061820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of telomeric D-loop disassembly","termid":"GO:1905838"}


id: PBO:0057570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 765","termid":"PBO:0057570"}


id: GO:0140581
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107323],"is_not":false,"summary":null,"term":"GO:0140581"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu+(in) = ADP + phosphate + Cu+(out).","definition_xrefs":["RHEA:25792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transporter activity","termid":"GO:0005375"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"P-type monovalent copper transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.2.2.8","MetaCyc:RXN-14455"],"termid":"GO:0140581","terms_by_termid":{"GO:0140581":null}}


id: MONDO:0958000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 11 with multiple congenital anomalies and dysmorphic facies","secondary_identifiers":["UMLS:C5882734","OMIM:620654","MEDGEN:1846947"],"termid":"MONDO:0958000","xrefs":{"Monarch":{"xref_id":"0958000"}}}


id: GO:1903150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any calcium ion transmembrane transporter activity that is involved in calcium ion import into cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000061","ISBN:0-8249-3695-6","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium ion transmembrane transporter activity involved in calcium ion import into cell (obsolete GO:1903150)","synonyms":[{"name":"calcium ion transmembrane transporter activity involved in calcium ion import into cell","type":"exact"},{"name":"calcium ion transmembrane transporter activity involved in calcium ion uptake into cell","type":"exact"}],"termid":"GO:1903150"}


id: GO:0097647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by amylin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:10871296","PMID:18687416","PMID:12037140","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor signaling pathway","termid":"GO:0097646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"amylin receptor signaling pathway","synonyms":[{"name":"amilyn receptor signalling pathway","type":"exact"}],"termid":"GO:0097647"}


id: PBO:0052741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 33","termid":"PBO:0052741"}


id: PBO:0045115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublesex and mab-3 related transcription factor 2","termid":"PBO:0045115"}


id: PBO:0054234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1616","termid":"PBO:0054234"}


id: PBO:0070155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 69 pseudogene","termid":"PBO:0070155"}


id: GO:0098789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The targeted, endonucleolytic cleavage of a pre-mRNA, required for polyadenylation of the 3' end. This cleavage is directed by binding sites near the 3' end of the mRNA and leaves a 3' hydoxyl end which then becomes a target for adenylation.","gene_count":0,"genotype_count":0,"name":"obsolete pre-mRNA cleavage required for polyadenylation (obsolete GO:0098789)","synonyms":[{"name":"cleavage and polyadenylylation specificity factor activity","type":"related"},{"name":"pre-mRNA cleavage factor activity","type":"exact"}],"termid":"GO:0098789"}


id: GO:1905682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of innate immunity memory response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of innate immunity memory response","termid":"GO:1905680"},{"relation_name":"positively_regulates","term_name":"innate immunity memory response","termid":"GO:0090714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of innate immunity memory response","synonyms":[{"name":"activation of innate immunity memory response","type":"narrow"},{"name":"up regulation of innate immunity memory response","type":"exact"},{"name":"up-regulation of innate immunity memory response","type":"exact"},{"name":"upregulation of innate immunity memory response","type":"exact"}],"termid":"GO:1905682"}


id: PBO:0053525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 520","termid":"PBO:0053525"}


id: PBO:0061744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin 3","termid":"PBO:0061744"}


id: PBO:0048152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYN proto-oncogene, Src family tyrosine kinase","termid":"PBO:0048152"}


id: PATO:0002426
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being shaped like a boat.","definition_xrefs":["wordnetweb:wordnetweb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaphoid","termid":"PATO:0002426"}


id: PBO:0074032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 19","termid":"PBO:0074032"}


id: MONDO:0100523
data:
  {"annotated_genes":["SJAG_01530","SJAG_04566"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86029,86028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008438"}]},"cv_name":"mondo","definition":"Heterozygous variants in SPAST have been reported in relation to pure spastic paraplegias (infantile, ascending), complicated or complex spastic paraplegia (with dementia, cerebellar ataxia, epilepsy, and/or peripheral neuropathy) and cerebral palsy. Age of symptom onset ranges from neonatal to advanced age with varying symptom severity,","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01530":null,"SJAG_04566":null},"genotype_count":0,"is_obsolete":false,"name":"SPAST-related motor disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100523","terms_by_termid":{"MONDO:0008438":null},"xrefs":{"Monarch":{"xref_id":"0100523"}}}


id: GO:0003732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with the cap structure at the 5' end of a small nuclear RNA molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNA cap binding (obsolete GO:0003732)","synonyms":[{"name":"snRNA cap binding","type":"exact"}],"termid":"GO:0003732"}


id: PBO:0029197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_serine_phosphorylation_during_mitotic_M_phase","termid":"PBO:0029197"}


id: PBO:0085153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome assembly factor; involved in chromatin assembly, disassembly; required for recovery after DSB repair; role in H3K56 acetylation required for expression homeostasis, buffering mRNA synthesis rate against gene dosage changes in S phase; anti-silencing protein, derepresses silent loci when overexpressed; role in regulating Ty1 transposition; relocalizes to cytosol under hypoxia; growth defect of asf1 null is functionally complemented by either human ASF1A or ASF1B","termid":"PBO:0085153"}


id: PBO:0051503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IK cytokine","termid":"PBO:0051503"}


id: GO:0106294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + O2 = NADP + hydrogen peroxide (H2O2).","definition_xrefs":["RHEA:11260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD(P)H oxidase H2O2-forming activity","termid":"GO:0016174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"NADPH oxidase H202-forming activity","termid":"GO:0106294"}


id: MONDO:0017412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 2q31.1 microduplication syndrome (obsolete MONDO:0017412)","termid":"MONDO:0017412","xrefs":{"Monarch":{"xref_id":"0017412"}}}


id: FYPO:0006872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal during a cellular response to ionizing radiation. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H2A phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"increased histone H2A phosphorylation during cellular response to IR","type":"exact"},{"name":"increased histone H2A phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased histone H2A phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006872"}


id: GO:0072357
data:
  {"annotated_genes":["SJAG_04968","SJAG_02536","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97195,111405,116028],"is_not":false,"summary":null,"term":"GO:0072357"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex that contains a catalytic subunit (PPP1CA, PPP1CB or PPP1CC) and the regulatory subunits PPP1R10 (PNUTS), TOX4 and WDR82, and plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.","definition_xrefs":["GOC:mah","PMID:20516061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase type 1 complex","termid":"GO:0000164"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_03126":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"PTW/PP1 phosphatase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072357","terms_by_termid":{"GO:0072357":null}}


id: PR:000064868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphothreonine at the fourth position of one or more of the C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PomBase:VW","PMID:31276588","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rpb1/Phos(CTD-S2,S5,S7)","termid":"PR:000050494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-T4)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 7 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:7","type":"exact"},{"name":"T4P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"rpb1/Phos(CTD-T4)","type":"exact"}],"termid":"PR:000064868"}


id: PBO:0031039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endoplasmic_reticulum_organization","termid":"PBO:0031039"}


id: GO:0045104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"is_a","term_name":"intermediate filament-based process","termid":"GO:0045103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"intermediate filament cytoskeleton organization","synonyms":[{"name":"intermediate filament cytoskeleton organisation","type":"exact"},{"name":"intermediate filament cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0045104"}


id: GO:0036069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a bacteriochlorophyll, which occur in the presence of light. Bacteriochlorophylls are any of the chlorophylls of photosynthetic bacteria; they differ structurally from the chlorophylls of higher plants.","definition_xrefs":["GOC:yaf","PMID:12242396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteriochlorophyll biosynthetic process","termid":"GO:0030494"},{"relation_name":"is_a","term_name":"light-dependent chlorophyll biosynthetic process","termid":"GO:0036067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"light-dependent bacteriochlorophyll biosynthetic process","synonyms":[{"name":"light dependent bacteriochlorophyll biosynthetic process","type":"exact"},{"name":"light-dependent bacteriochlorophyll anabolism","type":"exact"},{"name":"light-dependent bacteriochlorophyll biosynthesis","type":"exact"},{"name":"light-dependent bacteriochlorophyll formation","type":"exact"},{"name":"light-dependent bacteriochlorophyll synthesis","type":"exact"}],"termid":"GO:0036069"}


id: PBO:0065177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROP paired-like homeobox 1","termid":"PBO:0065177"}


id: GO:0006560
data:
  {"annotated_genes":["SJAG_00660","SJAG_01903","SJAG_02235","SJAG_03457","SJAG_03505","SJAG_03398","SJAG_00120","SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107017],"is_not":false,"summary":null,"term":"GO:0006560"},{"annotations":[112647,96851,106239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[90395,106240,99655,101271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[117443,106587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00495":null,"SJAG_00660":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_03398":null,"SJAG_03457":null,"SJAG_03505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"proline metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"proline metabolism","type":"exact"}],"termid":"GO:0006560","terms_by_termid":{"GO:0006560":null,"GO:0010121":null,"GO:0010133":null,"GO:0055129":null}}


id: GO:0103102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 8-methylthiooctylhydroximate = H+ + 7-methylthioheptyldesulfoglucosinolate + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:8-methylthiooctylhydroximate S-glucosyltransferase activity (obsolete GO:0103102)","termid":"GO:0103102"}


id: FYPO:0005040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:22144909","PomBase:mah","GO:0071620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen starvation","synonyms":[{"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen deprivation","type":"exact"},{"name":"normal phosphorylation of RNA polymerase II CTD serine 2 residues during nitrogen depletion","type":"exact"}],"termid":"FYPO:0005040"}


id: GO:0035600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methylthioether group (-SCH3) to a nucleotide in a tRNA molecule.","definition_xrefs":["PMID:20472640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA methylthiolation","termid":"GO:0035600"}


id: PBO:0053567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 582","termid":"PBO:0053567"}


id: PBO:0029195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitotic_prometaphase","termid":"PBO:0029195"}


id: MONDO:0100227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any motor neuron disease in which the cause of the disease is a mutation in the ALS2 gene.","definition_xrefs":["PMID:35053075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"ALS2-related motor neuron disease","synonyms":[{"name":"Alsin-related motor neuron disease","type":"exact"}],"termid":"MONDO:0100227","xrefs":{"Monarch":{"xref_id":"0100227"}}}


id: PBO:0043940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRTC3 antisense RNA 1","termid":"PBO:0043940"}


id: MONDO:0019047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of hearing loss that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare deafness (obsolete MONDO:0019047)","secondary_identifiers":["NCIT:C36194","Orphanet:68361"],"synonyms":[{"name":"complete deafness","type":"exact"},{"name":"rare hearing loss","type":"exact"},{"name":"total deafness","type":"exact"}],"termid":"MONDO:0019047","xrefs":{"Monarch":{"xref_id":"0019047"}}}


id: PBO:0084297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intraperoxisomal organizer of the peroxisomal import machinery; organizes the formation of the importomer complex, bridging the docking complex with the RING finger complex; tightly associated with the lumenal face of the peroxisomal membrane; essential for peroxisome biogenesis; binds PTS1-signal receptor Pex5p, and PTS2-signal receptor Pex7p","termid":"PBO:0084297"}


id: MONDO:0003670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An electrocardiographic finding of an injury in leads corresponding to the anatomic region of the posteroinferior wall of the heart.","definition_xrefs":["NCIT:C36068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"posteroinferior myocardial infarction","secondary_identifiers":["MEDGEN:216044","DOID:5843","UMLS:C1142433"],"synonyms":[{"name":"posteroinferior myocardial infarction by ECG finding","type":"exact"},{"name":"posteroinferior myocardial infarction by EKG finding","type":"exact"}],"termid":"MONDO:0003670","xrefs":{"Monarch":{"xref_id":"0003670"}}}


id: GO:0030448
data:
  {"annotated_genes":["SJAG_04312","SJAG_00124"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118650,118651],"is_not":false,"summary":null,"term":"GO:0030448"}]},"cv_name":"biological_process","definition":"Growth of fungi as threadlike, tubular structures that may contain multiple nuclei and may or may not be divided internally by septa, or cross-walls.","definition_xrefs":["GOC:mcc","ISBN:0471522295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyphal growth","references_by_uniquename":{"PMID:34427722":null},"secondary_identifiers":["GO:0075061"],"synonyms":[{"name":"formation of symbiont invasive hypha in host","type":"exact"},{"name":"formation of symbiont invasive hypha within host","type":"exact"},{"name":"formation of symbiont invasive hypha within host during symbiotic interaction","type":"exact"},{"name":"invasive hyphal growth","type":"exact"},{"name":"symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0030448","terms_by_termid":{"GO:0030448":null}}


id: PR:O13798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid16 gene.","definition_xrefs":["UniProtKB:O13798","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.01","synonyms":[{"name":"Spom972h-cid16","type":"exact"}],"termid":"PR:O13798"}


id: GO:0052079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of a host MAP kinase-mediated signal transduction pathway during the host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host MAP kinase-mediated signal transduction pathway (obsolete GO:0052079)","synonyms":[{"name":"activation by organism of defense-related host MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"activation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related host MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense-related host MAPK-mediated signal transduction pathway","type":"exact"},{"name":"positive regulation by organism of defense-related host mitogen-activated protein kinase-mediated signal transduction pathway","type":"exact"},{"name":"positive regulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"stimulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"up regulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"up-regulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related host MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052079"}


id: GO:0072084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the kidney nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"distal tubule morphogenesis","termid":"GO:0072156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of distal tubule identity","termid":"GO:0072084"}


id: PBO:0073179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 1","termid":"PBO:0073179"}


id: PBO:0082795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U4/U6.U5 snRNP complex; involved in pre-mRNA splicing via spliceosome; also required for pre-5S rRNA processing and may act in concert with Rnh70p; has homology to human SART-1","termid":"PBO:0082795"}


id: MONDO:0014093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the RBP3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 66","secondary_identifiers":["UMLS:C3715216","MEDGEN:811638","GARD:15923","ICD10CM:H35.5","DOID:0110393","OMIM:615233"],"synonyms":[{"name":"RBP3 retinitis pigmentosa","type":"exact"},{"name":"RP66","type":"exact"},{"name":"retinitis pigmentosa 66","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in RBP3","type":"exact"},{"name":"retinitis pigmentosa type 66","type":"exact"}],"termid":"MONDO:0014093","xrefs":{"Monarch":{"xref_id":"0014093"}}}


id: SO:0000662
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron which is spliced by the spliceosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosomal_intron","synonyms":[{"name":"spliceosomal intron","type":"exact"}],"termid":"SO:0000662"}


id: MONDO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal enlargement of the heart resulting from long-standing hypertension.","definition_xrefs":["NCIT:C4907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertensive heart disease","secondary_identifiers":["SCTID:64715009","ICD9:402.9","icd11.foundation:1210166201","UMLS:C0152105","DOID:11516","ICD9:402","MEDGEN:508889"],"synonyms":[{"name":"hypertensive cardiomegaly","type":"related"},{"name":"hypertensive cardiopathy","type":"related"},{"name":"hypertensive cardiovascular disease","type":"related"},{"name":"hypertensive heart disease","type":"exact"}],"termid":"MONDO:0001302","xrefs":{"Monarch":{"xref_id":"0001302"}}}


id: MONDO:1012059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"delta 9-tetrahydrocannabinol seizure, non-human animal","termid":"MONDO:1011840"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 9-tetrahydrocannabinol seizure, rabbit","secondary_identifiers":["OMIA:000267-9986"],"termid":"MONDO:1012059","xrefs":{"Monarch":{"xref_id":"1012059"}}}


id: PBO:0110337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group)","termid":"PBO:0110337"}


id: PBO:0053338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 205","termid":"PBO:0053338"}


id: GO:0050214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + progesterone = A + H2O + testosterone acetate.","definition_xrefs":["RHEA:11984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"progesterone monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02212","EC:1.14.99.4","MetaCyc:PROGESTERONE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"progesterone hydroxylase activity","type":"related"},{"name":"progesterone,hydrogen-donor:oxygen oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0050214"}


id: PR:O13612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nep2 gene.","definition_xrefs":["UniProtKB:O13612","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-specific protease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.02c","synonyms":[{"name":"Spom972h-nep2","type":"exact"},{"name":"meiotically up-regulated gene 120 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13612"}


id: PBO:0052114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily C member 2","termid":"PBO:0052114"}


id: GO:0071635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of transforming growth factor-beta.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"negatively_regulates","term_name":"transforming growth factor beta production","termid":"GO:0071604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transforming growth factor beta production","secondary_identifiers":["GO:2001202"],"synonyms":[{"name":"negative regulation of TGF-B production","type":"exact"},{"name":"negative regulation of TGF-beta production","type":"exact"},{"name":"negative regulation of TGFB production","type":"exact"},{"name":"negative regulation of TGFbeta production","type":"exact"},{"name":"negative regulation of transforming growth factor-beta production","type":"exact"},{"name":"negative regulation of transforming growth factor-beta secretion","type":"narrow"}],"termid":"GO:0071635"}


id: FYPO:0006952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of N2-acetyl-L-lysine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular N2-acetyl-L-lysine level","synonyms":[{"name":"increased N2-acetyl-L-lysine accumulation","type":"related"},{"name":"increased cellular N2-acetyl-L-lysine level during mitotic cell cycle","type":"related"},{"name":"increased cellular N2-acetyl-L-lysine level during vegetative growth","type":"exact"},{"name":"increased cellular N2-acetyl-lysine level","type":"exact"}],"termid":"FYPO:0006952"}


id: GO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an epithelial sheet are generated and organized. An epithelial sheet is a flat surface consisting of closely packed epithelial cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"}


id: PBO:0072368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 54","termid":"PBO:0072368"}


id: PBO:0084140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity glucose transporter; member of the major facilitator superfamily, expression is induced by low levels of glucose and repressed by high levels of glucose; HXT4 has a paralog, HXT7, that arose from the whole genome duplication","termid":"PBO:0084140"}


id: PBO:0089633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase inhibitor and disassembly protein in response to oxidative stress Oxr1","termid":"PBO:0089633"}


id: PBO:0011095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs/CORVET complex subunit Pep5/Vps11 (predicted)","termid":"PBO:0011095"}


id: GO:0098552
data:
  {"annotated_genes":["SJAG_01134","SJAG_00852","SJAG_04026","SJAG_03081","SJAG_04363","SJAG_00133","SJAG_00542","SJAG_03464","SJAG_03311","SJAG_01806","SJAG_04850","SJAG_03114","SJAG_00368","SJAG_01835","SJAG_05272","SJAG_01029","SJAG_02435","SJAG_00254","SJAG_01774","SJAG_01307","SJAG_04238","SJAG_05204","SJAG_00836","SJAG_00438","SJAG_02587","SJAG_02605","SJAG_04952","SJAG_00747","SJAG_01290","SJAG_04789","SJAG_02102","SJAG_04122","SJAG_01312","SJAG_03656","SJAG_02173","SJAG_00096","SJAG_04875","SJAG_02916","SJAG_00310","SJAG_MIT09","SJAG_03345","SJAG_00334","SJAG_02093","SJAG_02444","SJAG_03764","SJAG_00437","SJAG_00985","SJAG_MIT15","SJAG_04685","SJAG_04821","SJAG_04583","SJAG_04077","SJAG_04209","SJAG_05207","SJAG_00797","SJAG_00218","SJAG_02598","SJAG_00915","SJAG_MIT37","SJAG_02196","SJAG_01249","SJAG_00109","SJAG_02564","SJAG_02989","SJAG_02260","SJAG_01950","SJAG_01242","SJAG_03596","SJAG_01114","SJAG_04509","SJAG_02392","SJAG_00948","SJAG_00415","SJAG_03204","SJAG_00340","SJAG_03925","SJAG_02233","SJAG_00077","SJAG_02105","SJAG_07003","SJAG_03282","SJAG_04666","SJAG_00605","SJAG_00784","SJAG_04018","SJAG_04483","SJAG_03056","SJAG_01738","SJAG_03640","SJAG_05268","SJAG_04851","SJAG_04732","SJAG_01086"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87583,108758],"is_not":false,"summary":null,"term":"GO:0098552"},{"annotations":[94220,94580,109306,97845,101787,93398,105306,116179,98182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[90088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[105269,115212,88765,98756,104289,100014,103947,101994,106051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[92086,98477,87466,87397,91918,101908,103211,106052,89239,106503,110312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[106053,95346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[91090,113177,115044,115716,101730,94355,116781,94353,117218,107240,117771,100302,118205,93554,94341,114199,106022,89630,89433,94778,103483,113919,112476,91386,94354,101738,113814,101737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009897"},{"annotations":[109989],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[103248,99946],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[93731,108469,105961,106600],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"},{"annotations":[104470,89885,108748,94222,90635,99282,97896,99485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098553"},{"annotations":[93367,103164,115287,93315,118502,103135,107272,102517,118497,101306,89466,89003,107364,92781,92355,118491,95752,104473,94345,108244,88640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099617"}]},"cv_name":"cellular_component","definition":"A cellular component consisting of one leaflet of a membrane bilayer and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane","termid":"GO:0016020"}],"gene_count":93,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00096":null,"SJAG_00109":null,"SJAG_00133":null,"SJAG_00218":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00334":null,"SJAG_00340":null,"SJAG_00368":null,"SJAG_00415":null,"SJAG_00437":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00747":null,"SJAG_00784":null,"SJAG_00797":null,"SJAG_00836":null,"SJAG_00852":null,"SJAG_00915":null,"SJAG_00948":null,"SJAG_00985":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01114":null,"SJAG_01134":null,"SJAG_01242":null,"SJAG_01249":null,"SJAG_01290":null,"SJAG_01307":null,"SJAG_01312":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_01806":null,"SJAG_01835":null,"SJAG_01950":null,"SJAG_02093":null,"SJAG_02102":null,"SJAG_02105":null,"SJAG_02173":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02260":null,"SJAG_02392":null,"SJAG_02435":null,"SJAG_02444":null,"SJAG_02564":null,"SJAG_02587":null,"SJAG_02598":null,"SJAG_02605":null,"SJAG_02916":null,"SJAG_02989":null,"SJAG_03056":null,"SJAG_03081":null,"SJAG_03114":null,"SJAG_03204":null,"SJAG_03282":null,"SJAG_03311":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_03640":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03925":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04122":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04363":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04583":null,"SJAG_04666":null,"SJAG_04685":null,"SJAG_04732":null,"SJAG_04789":null,"SJAG_04821":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04875":null,"SJAG_04952":null,"SJAG_05204":null,"SJAG_05207":null,"SJAG_05268":null,"SJAG_05272":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"side of membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098552","terms_by_termid":{"GO:0005834":null,"GO:0009897":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098552":null,"GO:0098553":null,"GO:0098554":null,"GO:0099616":null,"GO:0099617":null,"GO:0106186":null}}


id: PBO:0109386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 17A","termid":"PBO:0109386"}


id: GO:1901431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cycloalkane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to cycloalkane","termid":"GO:0014071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cycloalkane","termid":"GO:1901431"}


id: MONDO:0013746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ventricular septal defect in which the cause of the disease is a mutation in the GATA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect","termid":"MONDO:0002070"},{"relation_name":"is_a","term_name":"structural congenital heart disease, multiple types - GATA4","termid":"MONDO:0100009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"ventricular septal defect 1","secondary_identifiers":["UMLS:C3280777","MEDGEN:482407","OMIM:614429"],"synonyms":[{"name":"GATA4 ventricular septal defect (disease)","type":"exact"},{"name":"VSD1","type":"related"},{"name":"ventricular septal defect (disease) caused by mutation in GATA4","type":"exact"},{"name":"ventricular septal defect 1","type":"exact"},{"name":"ventricular septal defect type 1","type":"exact"}],"termid":"MONDO:0013746","xrefs":{"Monarch":{"xref_id":"0013746"}}}


id: GO:0030891
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses ubiquitin ligase activity; the complex is usually pentameric; for example, in mammals the subunits are pVHL, elongin B, elongin C, cullin-2 (Cul2), and Rbx1.","definition_xrefs":["PMID:11865071","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ubiquitin ligase complex","termid":"GO:0000153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"VCB complex","synonyms":[{"name":"VHL complex","type":"exact"},{"name":"pVHL-elongin C-elongin B complex","type":"exact"},{"name":"von Hippel-Lindau tumor suppressor complex","type":"exact"}],"termid":"GO:0030891"}


id: PR:Q9P7P0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1718.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7P0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized acyltransferase C1718.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.04","synonyms":[{"name":"Spom972h-SPBC1718.04","type":"exact"}],"termid":"PR:Q9P7P0"}


id: PBO:0075147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 3","termid":"PBO:0075147"}


id: GO:0035269
data:
  {"annotated_genes":["SJAG_04053","SJAG_04316","SJAG_01264"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92540,101032,105432],"is_not":false,"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The transfer of mannose from dolichyl activated mannose to the hydroxyl group of a seryl or threonyl residue of a protein acceptor molecule, to form an O-linked protein-sugar linkage.","definition_xrefs":["PMID:9878797","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"protein mannosylation","termid":"GO:0035268"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01264":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked mannosylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein amino acid O-linked mannosylation","type":"exact"}],"termid":"GO:0035269","terms_by_termid":{"GO:0035269":null}}


id: PBO:0076021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 17a","termid":"PBO:0076021"}


id: PBO:0074895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 70","termid":"PBO:0074895"}


id: GO:0071083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to the cell surface protein CD47 and the low-affinity immunoglobulin epsilon Fc receptor (FCER2).","definition_xrefs":["PMID:10037797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphaV-beta3 integrin-CD47-FCER2 complex","synonyms":[{"name":"ITGAV-ITGB3-CD447-FCER2 complex","type":"narrow"}],"termid":"GO:0071083"}


id: RO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derives_into","termid":"RO:0001001"}


id: PBO:0047714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 5","termid":"PBO:0047714"}


id: PBO:0089052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase family V, transmembrane protein dislocase/calcium transporting ATPase Cta4","termid":"PBO:0089052"}


id: PBO:0067209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 274, pseudogene","termid":"PBO:0067209"}


id: GO:2000910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sterol import.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sterol transport","termid":"GO:0032372"},{"relation_name":"is_a","term_name":"regulation of sterol import","termid":"GO:2000909"},{"relation_name":"negatively_regulates","term_name":"sterol import","termid":"GO:0035376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sterol import","synonyms":[{"name":"negative regulation of sterol influx","type":"exact"},{"name":"negative regulation of sterol uptake","type":"exact"}],"termid":"GO:2000910"}


id: FYPO:0009005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitotic interphase in which microtubule-based movement oscillations occur at a faster speed than normal in a daughter cell that inherits no mitochondria.","definition_xrefs":["PMID:36633091","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased interphase nuclear movement velocity in daughter cell without mitochondria","synonyms":[{"name":"increased interphase nuclear oscillation velocity in daughter cell without mitochondria","type":"exact"}],"termid":"FYPO:0009005"}


id: GO:0030116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A growth factor that binds selectively and non-covalently to glial cell-derived neurotrophic factor receptors.","definition_xrefs":["PMID:11476867","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor binding","synonyms":[{"name":"glial cell line-derived neurotrophic factor receptor binding","type":"related"},{"name":"glial cell line-derived neurotrophic factor receptor ligand","type":"narrow"}],"termid":"GO:0030116"}


id: PR:O94729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tti2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.17c","synonyms":[{"name":"Spom972h-tti2","type":"exact"}],"termid":"PR:O94729"}


id: PBO:0045999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1A X-linked","termid":"PBO:0045999"}


id: FYPO:0004931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during sporulation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during sporulation","synonyms":[{"name":"normal RNA accumulation during sporulation","type":"related"},{"name":"normal cellular RNA level during sporulation","type":"exact"},{"name":"normal mRNA level during sporulation","type":"narrow"},{"name":"normal transcript level during sporulation","type":"exact"}],"termid":"FYPO:0004931"}


id: PBO:0049705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0049705"}


id: GO:0038156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-3 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-3-mediated signaling pathway","synonyms":[{"name":"IL-3-mediated signaling pathway","type":"exact"},{"name":"interleukin-3-mediated signalling pathway","type":"exact"}],"termid":"GO:0038156"}


id: PR:P87130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim17-A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.16c","secondary_identifiers":["UniProtKB:P87130"],"synonyms":[{"name":"SPAC3A12.16c","type":"related"},{"name":"Spom972h-TIMM17A","type":"exact"},{"name":"mitochondrial protein import protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87130"}


id: GO:0010819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of T cell chemotaxis. T cell chemotaxis is the directed movement of a T cell in response to an external stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell chemotaxis","termid":"GO:0010819"}


id: PBO:0026951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_centromeric_transcript_level","termid":"PBO:0026951"}


id: PBO:0089349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Slc1","termid":"PBO:0089349"}


id: GO:0044399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms of different species grow at a liquid-air interface or on a solid substrate under the flow of a liquid and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:tb","GOC:cc","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"},{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-species biofilm formation","secondary_identifiers":["GO:0044401","GO:0090607","GO:0044400","GO:0090608"],"synonyms":[{"name":"multi-species biofilm formation in or on host organism","type":"narrow"},{"name":"multi-species biofilm formation on inanimate substrate","type":"narrow"},{"name":"multi-species submerged biofilm formation","type":"narrow"},{"name":"multi-species surface biofilm formation","type":"related"}],"termid":"GO:0044399"}


id: PBO:0081580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 507","termid":"PBO:0081580"}


id: MONDO:0017379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyneuropathy-intellectual disability-acromicria-premature menopause syndrome is a rare genetic syndromic intellectual disability characterized by intellectual disability, polyneuropathy, short stature and short limbs, brachydactyly, and premature ovarian insufficiency. Only one familial case with three affected females was described and there have been no further descriptions in the literature since 1971.","definition_xrefs":["Orphanet:2928"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy-intellectual disability-acromicria-premature menopause syndrome","secondary_identifiers":["UMLS:C4749397","GARD:4424","MEDGEN:1665486"],"synonyms":[{"name":"Lundberg syndrome","type":"exact"},{"name":"polyneuropathy - intellectual deficit - acromicria - premature menopause","type":"related"},{"name":"polyneuropathy intellectual disability acromicria premature menopause","type":"related"},{"name":"polyneuropathy mental retardation acromicria premature menopause","type":"related"}],"termid":"MONDO:0017379","xrefs":{"Monarch":{"xref_id":"0017379"}}}


id: GO:0062229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of larval somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somatic muscle development","termid":"GO:0062223"},{"relation_name":"regulates","term_name":"larval somatic muscle development","termid":"GO:0007526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of larval somatic muscle development","termid":"GO:0062229"}


id: PBO:0044483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 26 subfamily C member 1","termid":"PBO:0044483"}


id: PBO:0065299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 3","termid":"PBO:0065299"}


id: PBO:0087858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator involved in adaptation to weak acid stress; activates transcription of TPO2, YRO2, and other genes encoding membrane stress proteins; HAA1 has a paralog, CUP2, that arose from the whole genome duplication; relocalizes from cytoplasm to nucleus upon DNA replication stress","termid":"PBO:0087858"}


id: PBO:0073372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTA domain containing 4","termid":"PBO:0073372"}


id: GO:0071056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM15.","definition_xrefs":["PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM15 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM15 complex","type":"narrow"}],"termid":"GO:0071056"}


id: FYPO:0001345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA recombination is abnormal in the vegetative growth phase of the life cycle. DNA recombination is a process that results in reassortment of genes, producing gene combinations different from those that were present in the parents.","definition_xrefs":["GO:0006310","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal DNA recombination during vegetative growth","synonyms":[{"name":"abnormal DNA recombination during mitotic cell cycle","type":"related"},{"name":"abnormal recombination during vegetative growth","type":"exact"},{"name":"recombination defects during vegetative growth","type":"exact"}],"termid":"FYPO:0001345"}


id: PBO:0078685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 1-1","termid":"PBO:0078685"}


id: PBO:0064873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 27","termid":"PBO:0064873"}


id: MOD:00472
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:11746907","URL:http://dx.doi.org/10.1002/rcm.517","Unimod:94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMID d0","synonyms":[{"name":"IMID","type":"related"},{"name":"IMID d0","type":"related"}],"termid":"MOD:00472"}


id: GO:1902615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any immune response that is involved in response to exogenous dsRNA.","definition_xrefs":["PMID:21266579","GOC:TermGenie","GO_REF:0000060","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"},{"relation_name":"part_of","term_name":"response to exogenous dsRNA","termid":"GO:0043330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response involved in response to exogenous dsRNA","synonyms":[{"name":"immune response involved in response to exogenous double-stranded RNA","type":"exact"},{"name":"immune response involved in response to viral dsRNA","type":"narrow"}],"termid":"GO:1902615"}


id: MONDO:0800371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial restrictive, 5","secondary_identifiers":["UMLS:C4310748","MEDGEN:934715"],"synonyms":[{"name":"RCM5","type":"exact"}],"termid":"MONDO:0800371","xrefs":{"Monarch":{"xref_id":"0800371"}}}


id: PBO:0089011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear export signal receptor Crm1","termid":"PBO:0089011"}


id: MONDO:0006070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute leukemia (obsolete MONDO:0006070)","termid":"MONDO:0006070","xrefs":{"Monarch":{"xref_id":"0006070"}}}


id: PBO:0110164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA wybutosine biosynthesis protein Tyw1","termid":"PBO:0110164"}


id: PR:000027580
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:20929775","PomBase:MAH","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2 (Schizosaccharomyces pombe)","termid":"PR:000027572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-","type":"exact"}],"termid":"PR:000027580"}


id: PBO:0034352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-evolutionary_variant_of","termid":"PBO:0034352"}


id: MONDO:0003155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma characterized by the presence of cavernous vascular spaces.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"},{"relation_name":"is_a","term_name":"vascular hemostatic disease","termid":"MONDO:0003159"},{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"cavernous hemangioma","secondary_identifiers":["UMLS:C0018920","MONDO:0006124","DOID:483","MESH:D006392","EFO:1000151","ICDO:9121/0","HP:0001048","MEDGEN:9184","NCIT:C3086","SCTID:416824008","SCTID:56975005"],"synonyms":[{"name":"cavernoma","type":"exact"},{"name":"cavernous angioma","type":"exact"},{"name":"cavernous haemangioma","type":"exact"},{"name":"cavernous hemangioma","type":"exact"},{"name":"cavernous hemangioma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003155","xrefs":{"Monarch":{"xref_id":"0003155"}}}


id: FYPO:0005953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by the mitotic G2 DNA damage checkpoint is greater than in wild type during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint during cellular response to ionizing radiation","termid":"FYPO:0003490"},{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"delayed mitotic G2 DNA damage checkpoint deactivation during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of mitotic G2 DNA damage checkpoint during cellular response to IR","type":"exact"},{"name":"prolonged mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005953"}


id: POMBASE_GENE_EX_REL:not_happens_during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not_happens_during","termid":"POMBASE_GENE_EX_REL:not_happens_during"}


id: GO:0120150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring disassembly.","definition_xrefs":["PMID:19109423"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring disassembly (obsolete GO:0120150)","termid":"GO:0120150"}


id: PBO:0089609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc1","termid":"PBO:0089609"}


id: PBO:0045148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 6","termid":"PBO:0045148"}


id: PBO:0046529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 29","termid":"PBO:0046529"}


id: FYPO:0003038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which RNA stability is abnormal. RNA molecules may be more or less likely to degrade over a given time period than in wild type. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal RNA stability","synonyms":[{"name":"altered RNA stability","type":"exact"}],"termid":"FYPO:0003038"}


id: PBO:0070618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 2","termid":"PBO:0070618"}


id: PBO:0005296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein, DNAJC11 family","termid":"PBO:0005296"}


id: PBO:0048450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gall bladder cancer associated suppressor of pyruvate carboxylase lncRNA","termid":"PBO:0048450"}


id: PBO:0053857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1127","termid":"PBO:0053857"}


id: PATO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pink color having high brightness and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pink","termid":"PATO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pale pink","termid":"PATO:0002020"}


id: PBO:0036401
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ6 with an S. pombe MTS","termid":"PBO:0036401"}


id: PBO:0090642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp15","termid":"PBO:0090642"}


id: GO:0048039
data:
  {"annotated_genes":["SJAG_02398","SJAG_04223"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112643,114661],"is_not":false,"summary":null,"term":"GO:0048039"}]},"cv_name":"molecular_function","definition":"Binding to ubiquinone, a quinone derivative with a tail of isoprene units.","definition_xrefs":["ISBN:0582227089","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinone binding","termid":"GO:0048038"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_04223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ubiquinone binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"coenzyme Q binding","type":"exact"},{"name":"coenzyme Q6 binding","type":"narrow"}],"termid":"GO:0048039","terms_by_termid":{"GO:0048039":null}}


id: MONDO:0007368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial benign copper deficiency is a rare disorder of mineral absorption and transport characterized by hypocupremia that manifests as failure to thrive, mild anemia, repeated seizures, hypotonia, and seborrheic skin. Spurring of the femur and tibia are also noted on radiographic imaging. Symptoms are reversible or improve with supplements of oral copper. There have been no further descriptions in the literature since 1982.","definition_xrefs":["Orphanet:1551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of copper metabolism","termid":"MONDO:0017762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial benign copper deficiency","secondary_identifiers":["OMIM:121270","UMLS:C1852576","GARD:1522","MEDGEN:338958","SCTID:763531001","MESH:C535468"],"synonyms":[{"name":"copper deficiency, familial benign","type":"related"},{"name":"familial benign hypocupremia","type":"related"}],"termid":"MONDO:0007368","xrefs":{"Monarch":{"xref_id":"0007368"}}}


id: GO:0032547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a purine deoxyribonucleoside, a compound consisting of a purine base linked to deoxyribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside binding","termid":"GO:0001883"},{"relation_name":"is_a","term_name":"deoxyribonucleoside binding","termid":"GO:0032546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"purine deoxyribonucleoside binding","termid":"GO:0032547"}


id: GO:0061163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The endoplasmic reticulum organization process that results in the structure of the endoplasmic reticulum being oriented in the cell. Endoplasmic reticulum polarization serves as a mechanism to compartmentalize cellular activities and to establish cell polarity.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum polarization","secondary_identifiers":["GO:0061167","GO:0061164","GO:0061165","GO:0061166"],"synonyms":[{"name":"ER localization involved in ER polarization at cell division site","type":"narrow"},{"name":"ER polarization","type":"exact"},{"name":"endoplasmic reticulum localisation involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"endoplasmic reticulum localization involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"establishment of endoplasmic reticulum localisation involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"establishment of endoplasmic reticulum localization involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"maintenance of endoplasmic reticulum location involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"transitional endoplasmic reticulum polarization at cell division site","type":"narrow"}],"termid":"GO:0061163"}


id: PBO:0043343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clock circadian regulator","termid":"PBO:0043343"}


id: MONDO:0015220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with a central nervous system malformation as major feature (obsolete MONDO:0015220)","secondary_identifiers":["Orphanet:108991"],"termid":"MONDO:0015220","xrefs":{"Monarch":{"xref_id":"0015220"}}}


id: MONDO:0009041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A recessive syndrome characterized by craniosynostosis, intellectual disability, seizures, choroidal coloboma, dysplastic kidneys, bat ears, cleft lip and palate, and beaked nose.","definition_xrefs":["PMID:7172471"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"excluded_subClassOf","term_name":"coloboma","termid":"MONDO:0001476"},{"relation_name":"excluded_subClassOf","term_name":"cystic kidney disease","termid":"MONDO:0002473"},{"relation_name":"excluded_subClassOf","term_name":"cleft lip","termid":"MONDO:0004747"},{"relation_name":"excluded_subClassOf","term_name":"cleft palate","termid":"MONDO:0016064"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniosynostosis-intellectual disability-clefting syndrome","secondary_identifiers":["MEDGEN:387829","OMIM:218650","MESH:C537906","UMLS:C1857472","MESH:C565663"],"synonyms":[{"name":"Baraitser Rodeck garner syndrome","type":"exact"},{"name":"craniosynostosis intellectual disability clefting syndrome","type":"related"},{"name":"craniosynostosis mental retardation clefting syndrome","type":"related"},{"name":"craniosynostosis, intellectual disability, seizures, choroidal coloboma, dysplastic kidneys, bat ears, cleft lip and palate, and beaked nose","type":"related"},{"name":"craniosynostosis, mental retardation, seizures, choroidal coloboma, dysplastic kidneys, bat ears, cleft lip and palate, and beaked nose","type":"related"},{"name":"craniosynostosis-intellectual disability-clefting syndrome","type":"exact"},{"name":"craniosynostosis-mental retardation-clefting syndrome","type":"exact"}],"termid":"MONDO:0009041","xrefs":{"Monarch":{"xref_id":"0009041"}}}


id: PR:O74796
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- orc6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.12","synonyms":[{"name":"Spom972h-orc6","type":"exact"}],"termid":"PR:O74796"}


id: GO:0051148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of muscle cell differentiation.","definition_xrefs":["CL:0000187","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"negatively_regulates","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle cell differentiation","synonyms":[{"name":"down regulation of muscle cell differentiation","type":"exact"},{"name":"down-regulation of muscle cell differentiation","type":"exact"},{"name":"downregulation of muscle cell differentiation","type":"exact"},{"name":"inhibition of muscle cell differentiation","type":"narrow"}],"termid":"GO:0051148"}


id: GO:1900306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltoheptaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptasaccharide transport","termid":"GO:1900294"},{"relation_name":"regulates","term_name":"maltoheptaose transport","termid":"GO:2001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of maltoheptaose transport","termid":"GO:1900306"}


id: MONDO:0017426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic polydactyly","termid":"MONDO:0011348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postaxial polydactyly of fingers","secondary_identifiers":["GARD:12460","SCTID:205131007","icd11.foundation:1146378807","UMLS:C0431904","MEDGEN:609221","Orphanet:294942"],"synonyms":[{"name":"postaxial polydactyly of hand","type":"exact"}],"termid":"MONDO:0017426","xrefs":{"Monarch":{"xref_id":"0017426"}}}


id: PBO:0070035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1332, pseudogene","termid":"PBO:0070035"}


id: GO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"positively_regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-1 production","secondary_identifiers":["GO:0045362","GO:0050716"],"synonyms":[{"name":"activation of interleukin-1 production","type":"narrow"},{"name":"positive regulation of IL-1 production","type":"exact"},{"name":"positive regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 secretion","type":"narrow"},{"name":"stimulation of interleukin-1 production","type":"narrow"},{"name":"up regulation of interleukin-1 production","type":"exact"},{"name":"up-regulation of interleukin-1 production","type":"exact"},{"name":"upregulation of interleukin-1 production","type":"exact"}],"termid":"GO:0032732"}


id: PomGeneEx:0000020
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present at the same level under one set of conditions or at one indicated time as otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unchanged","termid":"PomGeneEx:0000004"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level unchanged","synonyms":[{"name":"protein expression unchanged","type":"exact"},{"name":"unchanged protein level","type":"exact"}],"termid":"PomGeneEx:0000020"}


id: PBO:0044034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 3 Y-linked","termid":"PBO:0044034"}


id: PBO:0040959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 30","termid":"PBO:0040959"}


id: GO:2000727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"is_a","term_name":"positive regulation of cardiocyte differentiation","termid":"GO:1905209"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell differentiation","termid":"GO:2000725"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell differentiation","synonyms":[{"name":"positive regulation of cardiomyocyte differentiation","type":"exact"},{"name":"positive regulation of heart muscle cell differentiation","type":"related"}],"termid":"GO:2000727"}


id: MONDO:0005596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant cystic epithelial neoplasm arising from the glandular epithelium. The malignant epithelial cells invade the stroma. The cystic spaces contain serous or mucinous fluid. Representative examples include ovarian and pancreatic cystadenocarcinomas.","definition_xrefs":["NCIT:C2971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"cystic neoplasm","termid":"MONDO:0021077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cystadenocarcinoma","secondary_identifiers":["ICDO:8440/3","EFO:0006387","DOID:3111","UMLS:C0010631","MEDGEN:41385","MESH:D003536"],"synonyms":[{"name":"cystadenocarcinoma","type":"exact"},{"name":"cystadenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"cystadenocarcinoma NOS (morphologic abnormality)","type":"exact"},{"name":"cystadenocarcinoma, malignant","type":"exact"}],"termid":"MONDO:0005596","xrefs":{"Monarch":{"xref_id":"0005596"}}}


id: MONDO:1012026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"black hair follicular dysplasia, non-human animal","termid":"MONDO:1011734"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"black hair follicular dysplasia, cattle","secondary_identifiers":["OMIA:000110-9913"],"termid":"MONDO:1012026","xrefs":{"Monarch":{"xref_id":"1012026"}}}


id: GO:1902509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of methionine-importing activity.","definition_xrefs":["GOC:TermGenie","PMID:23748165","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methionine-importing complex","synonyms":[{"name":"methionine importer complex","type":"exact"},{"name":"methionine importing complex","type":"exact"}],"termid":"GO:1902509"}


id: MOD:01422
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a threonine hydroxyl with the carbonyl of the preceding residue to form a 5-methyloxazole or 5-methyloxazoline ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues","termid":"MOD:01419"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxazole/oxazoline ring crosslinked residues (Thr)","termid":"MOD:01422"}


id: PBO:0062429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 90 pseudogene","termid":"PBO:0062429"}


id: PBO:0076477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter 2, ATP binding cassette subfamily B member","termid":"PBO:0076477"}


id: FYPO:0001825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sodium export","termid":"FYPO:0001721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased sodium export","synonyms":[{"name":"increased cellular sodium export","type":"exact"},{"name":"increased sodium export during mitotic cell cycle","type":"related"},{"name":"increased sodium export during vegetative growth","type":"exact"},{"name":"increased sodium export from cell","type":"exact"},{"name":"increased sodium ion export","type":"exact"}],"termid":"FYPO:0001825"}


id: GO:0030011
data:
  {"annotated_genes":["SJAG_01722","SJAG_03718","SJAG_00355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93753,107665,115666],"is_not":false,"summary":null,"term":"GO:0030011"}]},"cv_name":"biological_process","definition":"The maintenance of established anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_01722":null,"SJAG_03718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030469","GO:0030013"],"termid":"GO:0030011","terms_by_termid":{"GO:0030011":null}}


id: PR:O74808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr1 gene.","definition_xrefs":["UniProtKB:O74808","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic loci regulator protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.17","synonyms":[{"name":"Spom972h-clr1","type":"exact"}],"termid":"PR:O74808"}


id: PBO:0064572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome p450 oxidoreductase","termid":"PBO:0064572"}


id: PR:O94455
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.14c gene.","definition_xrefs":["UniProtKB:O94455","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized calcium-binding protein C1687.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.14c","synonyms":[{"name":"Spom972h-SPAC1687.14c","type":"exact"}],"termid":"PR:O94455"}


id: GO:0140245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates translation occurring at the postsynapse.","definition_xrefs":["PMID:20427644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation at synapse","termid":"GO:0140243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation at postsynapse","termid":"GO:0140245"}


id: PBO:0049929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hedgehog acyltransferase","termid":"PBO:0049929"}


id: GO:0043870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-acetyl-L-aminoadipate-semialdehyde + NADP+ + phosphate = N(2)-acetyl-L-gamma-aminoadipyl phosphate + NADPH.","definition_xrefs":["RHEA:41948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acetyl-gamma-aminoadipyl-phosphate reductase activity","secondary_identifiers":["MetaCyc:RXN-5183"],"synonyms":[{"name":"AGPR","type":"related"},{"name":"ArgC","type":"related"},{"name":"LysY","type":"related"},{"name":"N-acetyl-alpha-glutamyl-phosphate reductase activity","type":"exact"},{"name":"N-acetyl-aminoadipate semialdehyde dehydrogenase activity","type":"exact"},{"name":"NAGSA dehydrogenase activity","type":"broad"}],"termid":"GO:0043870"}


id: MOD:01673
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminohexose group through a glycosidic bond.","definition_xrefs":["Unimod:43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylhexosaminylated residue","termid":"MOD:00436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylaminohexosylated residue","synonyms":[{"name":"HexNAc","type":"related"},{"name":"HexNAcRes","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"}],"termid":"MOD:01673"}


id: PBO:0047480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 7","termid":"PBO:0047480"}


id: GO:0015020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucuronate acceptor + UDP-alpha-D-glucuronate = acceptor beta-D-glucuronoside + H+ + UDP.","definition_xrefs":["RHEA:21032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucuronosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5617143","Reactome:R-HSA-9756183","EC:2.4.1.17","Reactome:R-HSA-174916","Reactome:R-HSA-5604975","Reactome:R-HSA-8941701","Reactome:R-HSA-9632038","Reactome:R-HSA-9756134","Reactome:R-HSA-9756156","Reactome:R-HSA-9638097","Reactome:R-HSA-9632039","Reactome:R-HSA-159194","Reactome:R-HSA-9758661","Reactome:R-HSA-159179","Reactome:R-HSA-9749977","MetaCyc:UDP-GLUCURONOSYLTRANSFERASE-RXN","Reactome:R-HSA-9036102","GO:0003981","Reactome:R-HSA-2162099","Reactome:R-HSA-5604954","Reactome:R-HSA-9036104","Reactome:R-HSA-174931","Reactome:R-HSA-158546"],"synonyms":[{"name":"1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"17-OH steroid UDPGT activity","type":"narrow"},{"name":"17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"3-OH androgenic UDPGT activity","type":"narrow"},{"name":"3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"4-nitrophenol UDPGT activity","type":"narrow"},{"name":"GT activity","type":"related"},{"name":"PNP-UDPGT","type":"related"},{"name":"UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"UDP glucuronic acid transferase activity","type":"related"},{"name":"UDP glucuronosyltransferase activity","type":"related"},{"name":"UDP glucuronyltransferase activity","type":"related"},{"name":"UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"related"},{"name":"UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"UDP-glucuronosyltransferase activity","type":"related"},{"name":"UDP-glucuronyltransferase activity","type":"related"},{"name":"UDPGA transferase activity","type":"related"},{"name":"UDPGA-glucuronyltransferase activity","type":"related"},{"name":"UDPGT activity","type":"related"},{"name":"UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"bilirubin UDPGT activity","type":"narrow"},{"name":"bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"morphine glucuronyltransferase activity","type":"narrow"},{"name":"p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"pnp-UDPGT activity","type":"narrow"},{"name":"uridine 5'-diphosphoglucuronyltransferase activity","type":"related"},{"name":"uridine diphosphate glucuronyltransferase activity","type":"related"},{"name":"uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucuronyltransferase activity","type":"related"}],"termid":"GO:0015020"}


id: FYPO:0002125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to plasma membrane during vegetative growth","synonyms":[{"name":"abnormal protein localisation to plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization in plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization to plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002125"}


id: PBO:0072769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100P binding protein","termid":"PBO:0072769"}


id: MOD:01754
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01754"}


id: MONDO:0008393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Rubinstein-Taybi syndrome in which the cause of the disease is a mutation in the CREBBP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rubinstein-Taybi syndrome","termid":"MONDO:0019188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320","MONDO:0005497"],"is_obsolete":false,"name":"Rubinstein-Taybi syndrome due to CREBBP mutations","secondary_identifiers":["GARD:17534","MEDGEN:1639327","NCIT:C153290","Orphanet:353277","UMLS:C4551859","OMIM:180849"],"synonyms":[{"name":"CREBBP Rubinstein-Taybi syndrome","type":"exact"},{"name":"RSTS","type":"related"},{"name":"RSTS1","type":"exact"},{"name":"Rubinstein syndrome","type":"related"},{"name":"Rubinstein-Taybi syndrome 1","type":"exact"},{"name":"Rubinstein-Taybi syndrome caused by mutation in CREBBP","type":"exact"},{"name":"Rubinstein-Taybi syndrome due to CREBBP mutations","type":"exact"},{"name":"Rubinstein-Taybi syndrome type 1","type":"exact"},{"name":"broad thumb-hallux syndrome","type":"related"},{"name":"broad thumbs and great toes, characteristic facies, and intellectual disability","type":"related"},{"name":"broad thumbs and great toes, characteristic facies, and mental retardation","type":"related"}],"termid":"MONDO:0008393","xrefs":{"Monarch":{"xref_id":"0008393"}}}


id: MONDO:0017034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease in childhood and adulthood (obsolete MONDO:0017034)","secondary_identifiers":["Orphanet:264944"],"synonyms":[{"name":"secondary ILD in childhood and adulthood","type":"exact"}],"termid":"MONDO:0017034","xrefs":{"Monarch":{"xref_id":"0017034"}}}


id: PBO:0059524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded heavy strand origin of replication","termid":"PBO:0059524"}


id: PBO:0068725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 14, pseudogene","termid":"PBO:0068725"}


id: PATO:0000163
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000163 relative rate (obsolete PATO:0000163)","termid":"PATO:0000163"}


id: PBO:0064712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 48","termid":"PBO:0064712"}


id: GO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to negative selection in B cells. Mechanisms of negative selection include anergy and deletion.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell selection","termid":"GO:0002339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell negative selection","synonyms":[{"name":"B lymphocyte negative selection","type":"exact"},{"name":"B-cell negative selection","type":"exact"},{"name":"B-lymphocyte negative selection","type":"exact"}],"termid":"GO:0002352"}


id: PBO:0030841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_adenine_import","termid":"PBO:0030841"}


id: PBO:0027518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_horsetail_movement","termid":"PBO:0027518"}


id: PBO:0049777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9 pseudogene 5","termid":"PBO:0049777"}


id: MONDO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A capillary hemangioma of the skin, presenting as a red papular lesion.","definition_xrefs":["NCIT:C4390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary hemangioma","termid":"MONDO:0002407"},{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cherry hemangioma","secondary_identifiers":["UMLS:C0343082","MEDGEN:87470","SCTID:5050001","DOID:2495"],"synonyms":[{"name":"Senile angioma","type":"exact"},{"name":"Senile hemangioma","type":"exact"},{"name":"Senile naevus of skin","type":"exact"},{"name":"cherry angioma","type":"exact"},{"name":"cherry hemangioma","type":"exact"}],"termid":"MONDO:0002323","xrefs":{"Monarch":{"xref_id":"0002323"}}}


id: GO:0009186
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665","SJAG_04657","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106727,91946,94990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[117461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[117463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009186","terms_by_termid":{"GO:0006227":null,"GO:0006233":null,"GO:0006240":null}}


id: PBO:0062481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily M member 1 pseudogene","termid":"PBO:0062481"}


id: MONDO:0016056
data:
  {"annotated_genes":["SJAG_00768","SJAG_00773","SJAG_04070","SJAG_03161","SJAG_01293","SJAG_01082","SJAG_05245","SJAG_04259","SJAG_02737","SJAG_03891","SJAG_03617","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054593"},{"annotations":[84608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054716"},{"annotations":[85521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054761"},{"annotations":[85545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054804"},{"annotations":[85546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054806"},{"annotations":[85915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032583"},{"annotations":[85883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030339"},{"annotations":[85274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031060"},{"annotations":[85233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011488"},{"annotations":[85136,85137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859342"},{"annotations":[84787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011437"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00768":null,"SJAG_00773":null,"SJAG_01082":null,"SJAG_01293":null,"SJAG_02737":null,"SJAG_03161":null,"SJAG_03617":null,"SJAG_03891":null,"SJAG_04070":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_05245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"isolated congenital microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:199642","UMLS:C0025958","GARD:3603","DOID:0070297","MEDGEN:44422","MedDRA:10027534"],"synonyms":[{"name":"microcephaly, primary","type":"exact"},{"name":"primary microcephaly","type":"exact"},{"name":"true microcephaly","type":"exact"}],"termid":"MONDO:0016056","terms_by_termid":{"MONDO:0011437":null,"MONDO:0011488":null,"MONDO:0030339":null,"MONDO:0031060":null,"MONDO:0032583":null,"MONDO:0054593":null,"MONDO:0054716":null,"MONDO:0054761":null,"MONDO:0054804":null,"MONDO:0054806":null,"MONDO:0859342":null},"xrefs":{"Monarch":{"xref_id":"0016056"}}}


id: PBO:0034454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomerase_holoenzyme_complex_assembly","termid":"PBO:0034454"}


id: FYPO:0001751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of homocitrate synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"increased homocitrate synthase activity","termid":"FYPO:0001751"}


id: MONDO:0007724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hirsutism-skeletal dysplasia-intellectual disability syndrome","secondary_identifiers":["MESH:C536705","OMIM:142625","Orphanet:2156","UMLS:C0795976","MEDGEN:163202"],"synonyms":[{"name":"Wiedemann Oldigs Oppermann syndrome","type":"related"},{"name":"Wiedemann-Oldigs-Oppermann syndrome","type":"exact"},{"name":"hirsutism skeletal dysplasia intellectual disability syndrome","type":"related"},{"name":"hirsutism skeletal dysplasia mental retardation syndrome","type":"related"},{"name":"hirsutism, skeletal dysplasia, and intellectual disability","type":"related"},{"name":"hirsutism, skeletal dysplasia, and mental retardation","type":"related"}],"termid":"MONDO:0007724","xrefs":{"Monarch":{"xref_id":"0007724"}}}


id: GO:0003258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the differentiation of an endocardial precursor cell.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation (obsolete GO:0003258)","termid":"GO:0003258"}


id: MONDO:0032874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 43","secondary_identifiers":["DOID:0111856","OMIM:618699","MEDGEN:1684675","UMLS:C5231466"],"synonyms":[{"name":"CILD43","type":"related"},{"name":"CILIARY DYSKINESIA, PRIMARY, 43","type":"related"},{"name":"Ciliary Dyskinesia, Primary, 43, With or Without Situs Inversus","type":"related"}],"termid":"MONDO:0032874","xrefs":{"Monarch":{"xref_id":"0032874"}}}


id: GO:0019080
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65265],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0075523"}]},"cv_name":"biological_process","definition":"A process by which a viral gene is converted into a mature gene product or products (proteins or RNA). This includes viral transcription, processing to produce a mature RNA product, and viral translation.","definition_xrefs":["GOC:jl","GOC:bf","ISBN:0121585336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral gene expression","references_by_uniquename":{"GO_REF:0000043":null},"synonyms":[{"name":"viral genome expression","type":"exact"}],"termid":"GO:0019080","terms_by_termid":{"GO:0075523":null}}


id: PBO:0056153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage immunometabolism regulator","termid":"PBO:0056153"}


id: GO:0071241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inorganic substance stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to inorganic substance (obsolete GO:0071241)","termid":"GO:0071241"}


id: MONDO:0010815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia tarda","termid":"MONDO:0019667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia tarda with characteristic facies","secondary_identifiers":["OMIM:600093","DOID:0112289","MESH:C564003","UMLS:C1838653","MEDGEN:325071"],"synonyms":[{"name":"spondyloepiphyseal dysplasia tarda with characteristic facies","type":"exact"}],"termid":"MONDO:0010815","xrefs":{"Monarch":{"xref_id":"0010815"}}}


id: PBO:0077776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM40 pseudogene 3","termid":"PBO:0077776"}


id: PBO:0077691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNIP2 pseudogene 1","termid":"PBO:0077691"}


id: GO:0042755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue.","definition_xrefs":["PMID:19361967","GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eating behavior","synonyms":[{"name":"eating behaviour","type":"exact"}],"termid":"GO:0042755"}


id: MONDO:0007802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias","termid":"MONDO:0005345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias 3, autosomal","secondary_identifiers":["MESH:C567191","GARD:18184","MEDGEN:382538","OMIM:146450","UMLS:C2675154"],"synonyms":[{"name":"HYSP3","type":"related"},{"name":"hypospadias 3, autosomal","type":"exact"},{"name":"hypospadias 3, autosomal, multifactorial","type":"exact"}],"termid":"MONDO:0007802","xrefs":{"Monarch":{"xref_id":"0007802"}}}


