# terms

id: PATO:0001207
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001207 absolute compatability (obsolete PATO:0001207)","termid":"PATO:0001207"}


id: MONDO:0018525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the exocrine pancreas. It occurs predominantly in young women. It is characterized by the presence of extensive necrosis and hemorrhage and is composed of polyhedral cells forming solid and pseudopapillary patterns. There is morphologic evidence of perineural invasion, vascular invasion, or extensive invasion into the surrounding tissues.","definition_xrefs":["NCIT:C5728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"solid pseudopapillary carcinoma of pancreas","secondary_identifiers":["DOID:6827","ICDO:8452/3","MEDGEN:236832","Orphanet:424065","UMLS:C1336029","GARD:21780"],"synonyms":[{"name":"pancreatic solid pseudopapillary carcinoma","type":"exact"},{"name":"solid pseudopapillary carcinoma of pancreas","type":"exact"},{"name":"solid pseudopapillary carcinoma of the pancreas","type":"exact"},{"name":"solid pseudopapillary neoplasm of the pancreas","type":"broad"}],"termid":"MONDO:0018525","xrefs":{"Monarch":{"xref_id":"0018525"}}}


id: PBO:0113023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional DNA-directed DNA polymerase/deoxycytidyl transferase; involved in repair of abasic sites and adducted guanines in damaged DNA by translesion synthesis (TLS); forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p; relocalizes from nucleus to cytoplasm upon DNA replication stress; may be involved in meiosis","termid":"PBO:0113023"}


id: MOD:01648
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-tryptophan.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tryptophan removal","termid":"MOD:01648"}


id: PBO:0114082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, predicted GPI anchor, possible peptidase","termid":"PBO:0114082"}


id: PBO:0108927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCSER2 pseudogene 1","termid":"PBO:0108927"}


id: GO:0051990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxyglutarate + acceptor = 2-oxoglutarate + reduced acceptor.","definition_xrefs":["RHEA:38295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(R)-2-hydroxyglutarate dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-880007","MetaCyc:RXN-14932","EC:1.1.99.39","Reactome:R-HSA-880053"],"synonyms":[{"name":"D-2-hydroxyglutarate dehydrogenase activity","type":"exact"}],"termid":"GO:0051990"}


id: PBO:0027180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere_outer_repeat","termid":"PBO:0027180"}


id: PBO:0061692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210 like","termid":"PBO:0061692"}


id: PBO:0054137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1503","termid":"PBO:0054137"}


id: PBO:0048869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA4 antisense RNA 1","termid":"PBO:0048869"}


id: PBO:0039313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 7","termid":"PBO:0039313"}


id: GO:0180047
data:
  {"annotated_genes":["SJAG_02903","SJAG_04231","SJAG_05219","SJAG_00831"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95925,103258,106187,117262],"is_not":false,"summary":null,"term":"GO:0180047"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichol phosphate mannose.","definition_xrefs":["PMID:18387370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00831":null,"SJAG_02903":null,"SJAG_04231":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dolichol phosphate mannose biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dol-P-Man biosynthesis","type":"exact"},{"name":"dolichol phosphate mannose biosynthesis","type":"exact"},{"name":"dolichol-P-mannose biosynthesis","type":"exact"}],"termid":"GO:0180047","terms_by_termid":{"GO:0180047":null}}


id: PBO:0029477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cerulenin","termid":"PBO:0029477"}


id: GO:0060915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell of the lung. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in lung development","termid":"GO:0060915"}


id: FYPO:0003646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of pyrithiamine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to pyrithiamine","synonyms":[{"name":"resistance to pyrithiamine during mitotic cell cycle","type":"related"},{"name":"resistance to pyrithiamine during vegetative growth","type":"exact"},{"name":"resistant to pyrithiamine","type":"exact"}],"termid":"FYPO:0003646"}


id: PBO:0086971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of Cdc7p-Dbf4p kinase complex; required for Cdc7p kinase activity and initiation of DNA replication; phosphorylates the Mcm2-7 family of proteins; cell cycle regulated; relative distribution to the nucleus increases upon DNA replication stress; co-expression of human CDC7 and DBF4 complements single cdc7 or dbf4 null mutations or the cdc7 dbf4 double null mutation","termid":"PBO:0086971"}


id: MONDO:0011787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of autosomal recessive limb-girdle muscular dystrophy that presents a highly variable age of onset and phenotypic spectrum typically characterized by slowly progressive proximal weakness of the pelvic and shoulder girdle musculature (predominantly affecting the lower limbs), frequently associated with waddling gait, scapular winging, calf and tongue hypertrophy, exercise-induced myalgia, and myoglobinuria and/or elevated creatine kinase serum levels. Abdominal muscle weakness, cardiomyopathy, respiratory muscle involvement and various brain abnormalities have also been reported.","definition_xrefs":["Orphanet:34515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of FKRP","termid":"MONDO:0016156"},{"relation_name":"is_a","term_name":"myopathy caused by variation in FKRP","termid":"MONDO:0700066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0002320","MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2I","secondary_identifiers":["DOID:0110299","NCIT:C126739","MEDGEN:339580","SCTID:718180000","GARD:12533","UMLS:C1846672","MESH:C564612","OMIM:607155"],"synonyms":[{"name":"FKRP autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD-FKRP related","type":"exact"},{"name":"LGMD2I","type":"exact"},{"name":"MDDGC5","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in FKRP","type":"exact"},{"name":"limb-girdle muscular dystrophy due to FKRP deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2I","type":"related"},{"name":"muscular dystrophy limb-girdle type 2I","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2I","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (Limb-girdle) type C, 5","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle) type C 5","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 5","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), type C5","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy limb-girdle FRKP-related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy, limb-girdle, Frkp-related","type":"related"}],"termid":"MONDO:0011787","xrefs":{"Monarch":{"xref_id":"0011787"}}}


id: PBO:0067463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 589, pseudogene","termid":"PBO:0067463"}


id: GO:1902638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural crest cell differentiation that is involved in parathyroid gland development.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:15741317","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell differentiation","termid":"GO:0014033"},{"relation_name":"part_of","term_name":"parathyroid gland development","termid":"GO:0060017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell differentiation involved in parathyroid gland development","termid":"GO:1902638"}


id: GO:0010648
data:
  {"annotated_genes":["SJAG_02765","SJAG_00875","SJAG_01114","SJAG_02426","SJAG_00229","SJAG_02169","SJAG_04825","SJAG_01253","SJAG_02858","SJAG_03678","SJAG_03486","SJAG_06270","SJAG_02231","SJAG_04206","SJAG_04910","SJAG_03355","SJAG_02451","SJAG_03185","SJAG_04462","SJAG_01297","SJAG_03508","SJAG_01245","SJAG_00457","SJAG_00824","SJAG_04249","SJAG_00883","SJAG_02013","SJAG_00289","SJAG_04259","SJAG_01679","SJAG_01983","SJAG_03072","SJAG_05346","SJAG_00990","SJAG_00293","SJAG_01184","SJAG_03501","SJAG_00169","SJAG_02233","SJAG_02000","SJAG_03353","SJAG_00610","SJAG_01386","SJAG_03681","SJAG_02379","SJAG_00526","SJAG_04455","SJAG_03799","SJAG_05000","SJAG_02514","SJAG_02481","SJAG_02311","SJAG_00642","SJAG_00266","SJAG_04551","SJAG_04943","SJAG_02336","SJAG_02392","SJAG_00975","SJAG_01142","SJAG_03089","SJAG_03263","SJAG_03893","SJAG_00209","SJAG_04522","SJAG_03126","SJAG_01790","SJAG_00991","SJAG_00424","SJAG_03592","SJAG_01464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107713,113221,106701,115344,90237,103377,113711,99088,111409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[115825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106072"},{"annotations":[107434,99932,92254,91596,115826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[100487,115573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[98939,117751,103288,95355,107076,106512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[88949,102330,101632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[87721,106603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[93706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[116522,95475,117752,94537,91171,98941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[106604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[92826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[110816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[104813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[92961,90241,106703,99090,100766,104507,92348,99168,106564,107006,92432,91240,95143,109627,115347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[105365,90748,111163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[90771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[108725,95602,110408,93679,99072,87537,109135,106617,113418,114022,92832,106864,116486,100941,102496,98378,104601,117665,115574,115929,112601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[115720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":71,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00229":null,"SJAG_00266":null,"SJAG_00289":null,"SJAG_00293":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00526":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00883":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01114":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01253":null,"SJAG_01297":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01679":null,"SJAG_01790":null,"SJAG_01983":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02169":null,"SJAG_02231":null,"SJAG_02233":null,"SJAG_02311":null,"SJAG_02336":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02426":null,"SJAG_02451":null,"SJAG_02481":null,"SJAG_02514":null,"SJAG_02765":null,"SJAG_02858":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03353":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03678":null,"SJAG_03681":null,"SJAG_03799":null,"SJAG_03893":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04259":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04825":null,"SJAG_04910":null,"SJAG_04943":null,"SJAG_05000":null,"SJAG_05346":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell communication","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010648","terms_by_termid":{"GO:0031030":null,"GO:0032007":null,"GO:0035024":null,"GO:0043409":null,"GO:0046580":null,"GO:0090029":null,"GO:0106057":null,"GO:0106072":null,"GO:0110034":null,"GO:0140499":null,"GO:0180040":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:2000639":null}}


id: MONDO:0004310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal tumor with multilayered rosettes, C19MC-altered, occurring in adults.","definition_xrefs":["NCIT:C8290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0002795"},{"relation_name":"is_a","term_name":"ependymoblastoma","termid":"MONDO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult embryonal tumor with multilayered rosettes, c19mc-altered","secondary_identifiers":["DOID:7631","MEDGEN:83792","UMLS:C0281330"],"synonyms":[{"name":"adult embryonal tumor with multilayered rosettes, C19MC-altered","type":"exact"},{"name":"adult embryonal tumour with multilayered rosettes, C19MC-altered","type":"exact"},{"name":"adult ependymoblastoma","type":"exact"},{"name":"embryonal tumor with multilayered rosettes, C19MC-altered","type":"broad"},{"name":"embryonal tumour with multilayered rosettes, C19MC-altered","type":"broad"},{"name":"ependymoblastoma of adults","type":"exact"}],"termid":"MONDO:0004310","xrefs":{"Monarch":{"xref_id":"0004310"}}}


id: PBO:0071210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 51","termid":"PBO:0071210"}


id: FYPO:0000678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes are not segregated equally to the two spindle poles in the first meiotic nuclear division. For example, both homologs of one or more chromosomes may be segregated to the same spindle pole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal meiotic chromosome segregation","termid":"FYPO:0000925"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"unequal homologous chromosome segregation","synonyms":[{"name":"aneuploidy","type":"related"},{"name":"chromosome non-disjunction at meiosis I","type":"related"},{"name":"chromosome nondisjunction at meiosis I","type":"related"},{"name":"chromosome nondisjunction during meiosis I","type":"related"},{"name":"impaired disjunction of homologous chromosomes","type":"exact"},{"name":"impaired homologous chromosome disjunction","type":"exact"},{"name":"meiosis I nondisjunction","type":"related"},{"name":"unequal chromosome disjunction during meiosis I","type":"exact"},{"name":"unequal homologous chromosome disjunction","type":"exact"}],"termid":"FYPO:0000678"}


id: PBO:0071081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 83","termid":"PBO:0071081"}


id: MONDO:0007531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electroencephalographic peculiarity: fronto-precentral beta wave groups","secondary_identifiers":["OMIM:130300","UMLS:C1851756","MEDGEN:343646"],"synonyms":[{"name":"electroencephalographic peculiarity: fronto-precentral beta wave groups","type":"exact"}],"termid":"MONDO:0007531","xrefs":{"Monarch":{"xref_id":"0007531"}}}


id: GO:0031269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a pseudopodium by rearrangement of the actin cytoskeleton and overlying membrane.","definition_xrefs":["GOC:pg","GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudopodium organization","termid":"GO:0031268"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"pseudopodium assembly","synonyms":[{"name":"pseudopodium extension","type":"exact"},{"name":"pseudopodium formation","type":"related"}],"termid":"GO:0031269"}


id: MONDO:0006305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mixed cell uveal melanoma (obsolete MONDO:0006305)","termid":"MONDO:0006305","xrefs":{"Monarch":{"xref_id":"0006305"}}}


id: PBO:0084965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosaminyltransferase; capable of modification of N-linked glycans in the Golgi apparatus","termid":"PBO:0084965"}


id: MONDO:0850283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asthma that is characterized by severe and sudden onset of increasing wheezing, airways closing, smooth muscle contraction, mucus plugging and lower airway edema that may be reversible upon treatment.","definition_xrefs":["DOID:0080810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute asthma","secondary_identifiers":["UMLS:C0349790","MEDGEN:578946"],"termid":"MONDO:0850283","xrefs":{"Monarch":{"xref_id":"0850283"}}}


id: SO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001432 sequence_variant_affecting_polyadenylation (obsolete SO:0001432)","synonyms":[{"name":"mutation affecting polyadenylation","type":"related"},{"name":"sequence variant affecting polyadenylation","type":"exact"}],"termid":"SO:0001432"}


id: PBO:0088894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RINT1 family protein","termid":"PBO:0088894"}


id: PBO:0000627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S8 (predicted)","termid":"PBO:0000627"}


id: PBO:0044861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAP3 binding cell death enhancer 1","termid":"PBO:0044861"}


id: PBO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6 (predicted)","termid":"PBO:0000484"}


id: PBO:0078847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 3","termid":"PBO:0078847"}


id: PBO:0050809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUNK antisense RNA 1","termid":"PBO:0050809"}


id: PBO:0086603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is regulated by Msn2p/Msn4p, indicating a possible role in stress response","termid":"PBO:0086603"}


id: PBO:0048575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin binding protein 2","termid":"PBO:0048575"}


id: MONDO:0013657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the CACNG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 10","secondary_identifiers":["UMLS:C3280284","GARD:16460","DOID:0070040","MEDGEN:481914","OMIM:614256"],"synonyms":[{"name":"CACNG2 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD10","type":"exact"},{"name":"autosomal dominant intellectual disability 10","type":"exact"},{"name":"autosomal dominant mental retardation 10","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 10","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in CACNG2","type":"exact"},{"name":"intellectual disability, autosomal dominant 10","type":"exact"},{"name":"intellectual disability, autosomal dominant type 10","type":"exact"},{"name":"mental retardation, autosomal dominant 10","type":"related"},{"name":"mental retardation, autosomal dominant type 10","type":"exact"}],"termid":"MONDO:0013657","xrefs":{"Monarch":{"xref_id":"0013657"}}}


id: PBO:0011449
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe is missing the conserved C-terminal region found in other species","termid":"PBO:0011449"}


id: GO:1902353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter by pheromones that results in positive regulation of induction of conjugation with cellular fusion.","definition_xrefs":["GOC:TermGenie","PMID:23872066","GOC:rn"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones (obsolete GO:1902353)","synonyms":[{"name":"up regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"up-regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"upregulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"GO:1902353"}


id: PBO:0080745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X antigen family member 1A","termid":"PBO:0080745"}


id: PBO:0001045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent protein Srb mediator subunit kinase Srb10","termid":"PBO:0001045"}


id: MONDO:0005397
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007681"}]},"cv_name":"mondo","definition":"Enlargement of the thyroid gland usually caused by lack of iodine in the diet, hyperthyroidism, or thyroid nodules. Symptoms include difficulty in breathing and swallowing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"is_obsolete":false,"name":"goiter","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0000853","MESH:D006042","ICD9:240.9","EFO:0004283","DOID:12176","NCIT:C26785","MEDGEN:42270","UMLS:C0018021","SCTID:3716002"],"synonyms":[{"name":"Thyromegaly","type":"exact"},{"name":"goiter","type":"exact"},{"name":"goiter (disease)","type":"exact"},{"name":"goitre (disease)","type":"exact"}],"termid":"MONDO:0005397","terms_by_termid":{"MONDO:0007681":null},"xrefs":{"Monarch":{"xref_id":"0005397"}}}


id: PBO:0047960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fraser extracellular matrix complex subunit 1","termid":"PBO:0047960"}


id: PBO:0067664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 842, pseudogene","termid":"PBO:0067664"}


id: MONDO:0024542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dysequilibrium syndrome in which the cause of the disease is a mutation in the VLDLR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, intellectual disability, and dysequilibrium","termid":"MONDO:0009133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 1","secondary_identifiers":["DOID:0070556","MEDGEN:1639436","OMIM:224050","UMLS:C4551552"],"synonyms":[{"name":"CAMRQ1","type":"related"},{"name":"VLDLR dysequilibrium syndrome","type":"exact"},{"name":"cerebellar ataxia and intellectual disability with or without quadrupedal locomotion 1","type":"related"},{"name":"cerebellar ataxia and mental retardation with or without quadrupedal locomotion 1","type":"related"},{"name":"cerebellar ataxia, congenital, and intellectual disability, autosomal recessive","type":"related"},{"name":"cerebellar ataxia, congenital, and mental retardation, autosomal recessive","type":"related"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 1","type":"exact"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome type 1","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome 1","type":"related"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome type 1","type":"exact"},{"name":"cerebellar hypoplasia and mental retardation with or without quadrupedal locomotion 1","type":"exact"},{"name":"cerebellar hypoplasia, VLDLR-associated","type":"related"},{"name":"dysequilibrium syndrome","type":"related"},{"name":"dysequilibrium syndrome caused by mutation in VLDLR","type":"exact"}],"termid":"MONDO:0024542","xrefs":{"Monarch":{"xref_id":"0024542"}}}


id: MONDO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic intellectual disability syndrome characterized by macrocephaly, hypotonia, dysmorphic facial features (wide forehead, ptosis, downslanting palpebral fissures, enlarged and calcified external ears, large jaw), sparse body hair, tall stature, and intellectual disability. Hearing loss, insulin-resistant diabetes, and progressive distal muscle wasting (leading to joint contractures) have also been reported in adulthood. Rare manifestations include behavioral abnormalities (aggression and restlessness), hypothyroidism, cerebral calcification, ataxia, and peripheral neuropathy.","definition_xrefs":["Orphanet:3042"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Primrose syndrome","secondary_identifiers":["GARD:4488","MESH:C536420","MEDGEN:162911","SCTID:726709001","OMIM:259050","UMLS:C0796121"],"synonyms":[{"name":"PRIMS","type":"related"},{"name":"Primrose syndrome","type":"exact"},{"name":"intellectual disability-cataracts-calcified pinnae-myopathy syndrome","type":"exact"},{"name":"ossified EAR cartilages with mental deficiency, muscle wasting, and BONY changes","type":"related"}],"termid":"MONDO:0009798","xrefs":{"Monarch":{"xref_id":"0009798"}}}


id: GO:0047343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + CTP = CDP-D-glucose + diphosphate.","definition_xrefs":["RHEA:18213","EC:2.7.7.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"glucose-1-phosphate cytidylyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.33-RXN","KEGG_REACTION:R00956"],"synonyms":[{"name":"CDP glucose pyrophosphorylase activity","type":"related"},{"name":"CDP-glucose diphosphorylase activity","type":"related"},{"name":"CDP-glucose pyrophosphorylase activity","type":"related"},{"name":"CTP:D-glucose-1-phosphate cytidylyltransferase activity","type":"related"},{"name":"CTP:alpha-D-glucose-1-phosphate cytidylyltransferase activity","type":"related"},{"name":"CTP:glucose-1-phosphate cytidylyltransferase activity","type":"exact"},{"name":"cytidine diphosphate glucose pyrophosphorylase activity","type":"related"},{"name":"cytidine diphosphate-D-glucose pyrophosphorylase activity","type":"related"},{"name":"cytidine diphosphoglucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0047343"}


id: GO:0090614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'methyl thioadenosine + H2O = 5'methyl thioinosine + NH3.","definition_xrefs":["RHEA:25025","PMID:23968233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"5'-methylthioadenosine deaminase activity","secondary_identifiers":["EC:3.5.4.31"],"termid":"GO:0090614"}


id: PBO:0031225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_cadmium_ion","termid":"PBO:0031225"}


id: GO:1905383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a presynapse.","definition_xrefs":["PMID:24449494","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to presynapse","synonyms":[{"name":"protein localisation in presynapse","type":"exact"},{"name":"protein localisation to presynapse","type":"exact"},{"name":"protein localization in presynapse","type":"exact"},{"name":"recruitment of presynaptic proteins","type":"exact"}],"termid":"GO:1905383"}


id: PBO:0040549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GNT2 pseudogene 1","termid":"PBO:0040549"}


id: PBO:0088824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lem2-Nur1 complex subunit Nur1","termid":"PBO:0088824"}


id: PBO:0051105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-18","termid":"PBO:0051105"}


id: PBO:0075898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 overlapping transcript 4","termid":"PBO:0075898"}


id: GO:0045949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphorus utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorus utilization","termid":"GO:0006795"},{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"positively_regulates","term_name":"phosphorus utilization","termid":"GO:0006794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphorus utilization","synonyms":[{"name":"activation of phosphorus utilization","type":"narrow"},{"name":"stimulation of phosphorus utilization","type":"narrow"},{"name":"up regulation of phosphorus utilization","type":"exact"},{"name":"up-regulation of phosphorus utilization","type":"exact"},{"name":"upregulation of phosphorus utilization","type":"exact"}],"termid":"GO:0045949"}


id: GO:0010145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructan, a polysaccharide consisting of fructose residues.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"fructan metabolic process","synonyms":[{"name":"fructan metabolism","type":"exact"},{"name":"levan metabolic process","type":"exact"}],"termid":"GO:0010145"}


id: PR:O13966
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aconitate hydratase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.06c","secondary_identifiers":["UniProtKB:O13966"],"synonyms":[{"name":"Aconitase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ACO2","type":"exact"},{"name":"citrate hydro-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13966"}


id: MONDO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 19 disorder","termid":"MONDO:0700024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 19","secondary_identifiers":["Orphanet:262687","UMLS:C4518507","GARD:20857","MEDGEN:1379548","SCTID:726358004"],"synonyms":[{"name":"partial duplication of chromosome type 19","type":"exact"},{"name":"partial trisomy of chromosome 19","type":"exact"}],"termid":"MONDO:0016937","xrefs":{"Monarch":{"xref_id":"0016937"}}}


id: PBO:0053025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine aminopeptidase 3 pseudogene 1","termid":"PBO:0053025"}


id: _global:input_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of has input","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"participates_in","termid":"_global:participates_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"input_of","secondary_identifiers":["RO:0002352"],"termid":"_global:input_of"}


id: PBO:0074966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-8","termid":"PBO:0074966"}


id: PBO:0070840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 19","termid":"PBO:0070840"}


id: GO:0033258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving plastid DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"plastid DNA metabolic process","synonyms":[{"name":"plastid DNA metabolism","type":"exact"}],"termid":"GO:0033258"}


id: PBO:0005071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ria1 (predicted)","termid":"PBO:0005071"}


id: FYPO:0005175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of catalase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal catalase activity","termid":"FYPO:0001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000002","FYPO:0005447","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased catalase activity","termid":"FYPO:0005175"}


id: GO:1900392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in regulation of transport.","definition_xrefs":["PMID:17446861","GOC:TermGenie","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900392)","termid":"GO:1900392"}


id: PBO:0040192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 5","termid":"PBO:0040192"}


id: FYPO:0005604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Rad52 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of Rad52 focus presence during vegetative growth","termid":"FYPO:0007191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Rad52 foci during cellular response to ionizing radiation","type":"related"},{"name":"increased duration of Rad22 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Rad52 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Rad52 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005604"}


id: GO:0070877
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds to heme and to pri-miRNAs, and is required for the formation of a pre-microRNA (pre-miRNA), the initial step of microRNA (miRNA) biogenesis. The complex is composed of the double-stranded-RNA-specific RNase Drosha (also called RNASEN) and the RNA-binding protein DGCR8 (heme-free or heme-bound forms). Within the complex, DGCR8 function as a molecular anchor necessary for the recognition of pri-miRNA at dsRNA-ssRNA junction and directs RNASEN/Drosha to cleave the 3' and 5' strands of a stem-loop to release hairpin-shaped pre-miRNAs.","definition_xrefs":["PMID:16963499","PMID:17159994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonuclease III complex","termid":"GO:1903095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"microprocessor complex","termid":"GO:0070877"}


id: PBO:0017987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Haemolysin-III family plasma membrane receptor implicated in zinc ion homeostasis Izh2 (predicted)","termid":"PBO:0017987"}


id: GO:0085029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of the extracellular matrix.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"extracellular matrix assembly","termid":"GO:0085029"}


id: GO:0038123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding of a heterodimeric TLR1:TLR2 complex, followed by transmission of the signal by the activated receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn","PMID:17318230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor TLR1:TLR2 signaling pathway","secondary_identifiers":["Reactome:R-HSA-168179"],"synonyms":[{"name":"TLR2:TLR1 signaling pathway","type":"exact"},{"name":"toll-like receptor TLR1:TLR2 signalling pathway","type":"exact"}],"termid":"GO:0038123"}


id: PBO:0090659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent amino acid oxidase involved in late endosome to Golgi transport Tda3","termid":"PBO:0090659"}


id: PBO:0083655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceII; encoded by a mobile group I intron within the mitochondrial COX1 gene; intron is normally spliced by the BI4p maturase but AI4p can mutate to acquire the same maturase activity","termid":"PBO:0083655"}


id: PBO:0081207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 7 pseudogene 1","termid":"PBO:0081207"}


id: GO:0097197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pre-organized unit composed either of adhesion molecules (mainly integrins and members of the Ig superfamily), signaling receptors and/or enzyme-enriched plasma membrane domains that compartmentalizes cellular processes. Tetraspanin-enriched microdomains might be specially suited for the regulation of avidity of adhesion receptors and the compartmentalization of enzymatic activities.","definition_xrefs":["GOC:ans","PMID:19709882","PMID:21930792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"tetraspanin-enriched microdomain","synonyms":[{"name":"TEM","type":"exact"},{"name":"membrane tetraspanin-enriched microdomain","type":"exact"}],"termid":"GO:0097197"}


id: MONDO:0800341
data:
  {"annotated_genes":["SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84866],"is_not":false,"summary":null,"term":"MONDO:0800341"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cap myopathy","termid":"MONDO:0015753"},{"relation_name":"is_a","term_name":"TPM3-related myopathy","termid":"MONDO:0100108"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital myopathy 4A, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:255310"],"synonyms":[{"name":"CAPM1","type":"exact"},{"name":"CFTD","type":"exact"},{"name":"CFTDM","type":"exact"},{"name":"NEM1","type":"exact"},{"name":"cap myopathy 1","type":"exact"},{"name":"fiber-type disproportion myopathy, congenital","type":"exact"},{"name":"myopathy, congenital, with fiber-type disproportion","type":"exact"},{"name":"nemaline myopathy 1","type":"exact"}],"termid":"MONDO:0800341","terms_by_termid":{"MONDO:0800341":null},"xrefs":{"Monarch":{"xref_id":"0800341"}}}


id: PBO:0061408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroplastin","termid":"PBO:0061408"}


id: SO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid which carries within its sequence a bacteriophage replication origin. When the host bacterium is infected with \\\"helper\\\" phage, a phagemid is replicated along with the phage DNA and packaged into phage capsids.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phagemid","secondary_identifiers":["http://en.wikipedia.org/wiki/Phagemid"],"synonyms":[{"name":"phagemid vector","type":"related"}],"termid":"SO:0000157"}


id: GO:0004656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["EC:1.14.11.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"procollagen-proline dioxygenase activity","termid":"GO:0019798"},{"relation_name":"is_a","term_name":"peptidyl-proline 4-dioxygenase activity","termid":"GO:0031545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"procollagen-proline 4-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03219","Reactome:R-HSA-1650808","RHEA:18945","MetaCyc:1.14.11.2-RXN"],"synonyms":[{"name":"collagen proline hydroxylase activity","type":"related"},{"name":"hydroxylase, collagen proline activity","type":"related"},{"name":"peptidyl proline hydroxylase activity","type":"broad"},{"name":"procollagen-L-proline,2-oxoglutarate:oxygen oxidoreductase (4-hydroxylating) activity","type":"related"},{"name":"procollagen-proline,2-oxoglutarate-4-dioxygenase activity","type":"exact"},{"name":"proline hydroxylase activity","type":"broad"},{"name":"proline protocollagen hydroxylase activity","type":"related"},{"name":"proline, 2-oxoglutarate dioxygenase activity","type":"broad"},{"name":"proline,2-oxoglutarate 4-dioxygenase activity","type":"broad"},{"name":"prolyl 4-hydroxylase activity","type":"broad"},{"name":"prolyl hydroxylase activity","type":"broad"},{"name":"prolyl-glycyl-peptide, 2-oxoglutarate:oxygen oxidoreductase, 4-hydroxylating activity","type":"broad"},{"name":"prolylprotocollagen dioxygenase activity","type":"related"},{"name":"prolylprotocollagen hydroxylase activity","type":"related"},{"name":"protocollagen hydroxylase activity","type":"broad"},{"name":"protocollagen proline 4-hydroxylase activity","type":"related"},{"name":"protocollagen proline dioxygenase activity","type":"related"},{"name":"protocollagen proline hydroxylase activity","type":"related"},{"name":"protocollagen prolyl hydroxylase activity","type":"related"}],"termid":"GO:0004656"}


id: PBO:0086210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds Bud6p and has a role in actin cable assembly; involved in the Bnr1p-dependent pathway of cable assembly; localizes to bud tip and bud neck","termid":"PBO:0086210"}


id: PBO:0087133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein involved in synthesis of 18S and 5.8S rRNAs; component of ribosomal small subunit (SSU) processome and 90S preribosome; required for pre-rRNA packaging and compaction of processome into dense terminal balls; part of Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription with role in biogenesis of large ribosomal subunit; binds single stranded tracts of U's; relocalizes from nucleolus to nucleus upon DNA replication stress","termid":"PBO:0087133"}


id: PBO:0045984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"euchromatic histone lysine methyltransferase 2","termid":"PBO:0045984"}


id: _global:causally_upstream_of_or_within,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"_global:causally_upstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within,_positive_effect","secondary_identifiers":["RO:0004047"],"termid":"_global:causally_upstream_of_or_within,_positive_effect"}


id: MONDO:0017747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of protein O-glycosylation","termid":"MONDO:0017741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"disorder of fucoglycosan synthesis","secondary_identifiers":["GARD:21341","MEDGEN:1843205","Orphanet:309505","UMLS:C5681046"],"termid":"MONDO:0017747","xrefs":{"Monarch":{"xref_id":"0017747"}}}


id: PR:Q9HGP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC29B5.04c gene.","definition_xrefs":["UniProtKB:Q9HGP1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29B5.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29B5.04c","synonyms":[{"name":"Spom972h-SPBC29B5.04c","type":"exact"}],"termid":"PR:Q9HGP1"}


id: PBO:0039420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin 4","termid":"PBO:0039420"}


id: GO:0098995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell wall lipopolysaccharides to allow entry into the host cell. For example a phage entering a Gram-negative bacterium may actively break down outer membrane lipopolysaccharides.","definition_xrefs":["GOC:dos","VZ:3940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell wall","termid":"GO:0052009"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell envelope lipopolysaccharide","secondary_identifiers":["VZ:3939"],"synonyms":[{"name":"degradation of host cell envelope lipopolysaccharide during viral entry","type":"exact"},{"name":"degradation of host lipopolysaccharide during virus entry","type":"exact"},{"name":"disassembly by virus of outer membrane lipopolysaccharide during viral entry","type":"narrow"},{"name":"disruption by virus of host envelope lipopolysaccharide during virus entry","type":"exact"}],"termid":"GO:0098995"}


id: GO:0019255
data:
  {"annotated_genes":["SJAG_01209"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108357],"is_not":false,"summary":null,"term":"GO:0019255"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucose 1-phosphate, a monophosphorylated derivative of glucose with the phosphate group attached to C-1.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucose 1-phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006008","MetaCyc:GLUCOSE1PMETAB-PWY"],"synonyms":[{"name":"glucose 1-phosphate metabolism","type":"exact"},{"name":"glucose 1-phosphate utilization","type":"related"}],"termid":"GO:0019255","terms_by_termid":{"GO:0019255":null}}


id: MONDO:0015846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A uterovaginal malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic uterovaginal malformation (obsolete MONDO:0015846)","secondary_identifiers":["Orphanet:180148"],"synonyms":[{"name":"syndrome associated with uterovaginal malformation","type":"exact"},{"name":"syndromic uterovaginal malformation","type":"exact"}],"termid":"MONDO:0015846","xrefs":{"Monarch":{"xref_id":"0015846"}}}


id: PBO:0065938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac GTPase activating protein 1","termid":"PBO:0065938"}


id: PBO:0082730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RNA polymerase II mediator complex; mediator is required for transcriptional activation and also has a role in basal transcription","termid":"PBO:0082730"}


id: MONDO:0007311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare subtype of CMT1 characterized by a variable clinical presentation. Onset within the first two years of life with a delay in walking is not uncommon; however, onset may occur later. CMT1E is caused by point mutations in the PMP22 (17p12) gene. The disease severity depends on the particular PMP22 mutation, with some cases being very mild and even resembling hereditary neuropathy with liability to pressure palsies, while others having an earlier onset with a more severe phenotype (reminiscent of Dejerine-Sottas syndrome) than that seen in CMT1A, caused by gene duplication. These severe cases may also report deafness and much slower motor nerve conduction velocities compared to CMT1A patients.","definition_xrefs":["Orphanet:90658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1E","secondary_identifiers":["MEDGEN:501212","icd11.foundation:1924906594","UMLS:C3495591","OMIM:118300","DOID:0110153","GARD:9190","MESH:C537986"],"synonyms":[{"name":"CMT 1E","type":"related"},{"name":"CMT1E","type":"exact"},{"name":"Charcot Marie Tooth disease type 1E","type":"related"},{"name":"Charcot-Marie-Tooth disease and deafness","type":"exact"},{"name":"Charcot-Marie-Tooth disease demyelinating type 1E","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1E","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1E","type":"exact"},{"name":"Charcot-Marie-Tooth disease-deafness","type":"exact"},{"name":"Charcot-Marie-Tooth disease-deafness syndrome","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy and deafness, autosomal dominant","type":"related"},{"name":"autosomal dominant Charcot-Marie-Tooth neuropathy and deafness","type":"exact"}],"termid":"MONDO:0007311","xrefs":{"Monarch":{"xref_id":"0007311"}}}


id: GO:1905827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of selenocysteine metabolic process.","definition_xrefs":["PMID:19716792","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of selenocysteine metabolic process","termid":"GO:1905825"},{"relation_name":"positively_regulates","term_name":"selenocysteine metabolic process","termid":"GO:0016259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of selenocysteine metabolic process","synonyms":[{"name":"activation of selenocysteine metabolic process","type":"narrow"},{"name":"activation of selenocysteine metabolism","type":"narrow"},{"name":"positive regulation of selenocysteine metabolism","type":"exact"},{"name":"up regulation of selenocysteine metabolic process","type":"exact"},{"name":"up regulation of selenocysteine metabolism","type":"exact"},{"name":"up-regulation of selenocysteine metabolic process","type":"exact"},{"name":"up-regulation of selenocysteine metabolism","type":"exact"},{"name":"upregulation of selenocysteine metabolic process","type":"exact"},{"name":"upregulation of selenocysteine metabolism","type":"exact"}],"termid":"GO:1905827"}


id: PR:G2TRU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.05c","synonyms":[{"name":"Spom972h-wtf6","type":"exact"}],"termid":"PR:G2TRU9"}


id: MONDO:0009220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fatty liver disease","termid":"MONDO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"visceral steatosis, congenital","secondary_identifiers":["SCTID:270881008","MEDGEN:90962","ICD9:571.8","MESH:C536351","UMLS:C0341447","OMIM:228100"],"synonyms":[{"name":"White liver disease","type":"related"},{"name":"fatal neonatal hepatic steatosis","type":"related"},{"name":"fatty liver disease, congenital","type":"related"},{"name":"fatty metamorphosis of viscera","type":"related"},{"name":"steatosis of liver","type":"related"},{"name":"visceral steatosis","type":"related"},{"name":"visceral steatosis, congenital","type":"exact"}],"termid":"MONDO:0009220","xrefs":{"Monarch":{"xref_id":"0009220"}}}


id: MONDO:0008470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia with punctate corneal dystrophy","secondary_identifiers":["Orphanet:163673","UMLS:C1866727","DOID:0112286","MESH:C566660","MEDGEN:357119","OMIM:183850"],"synonyms":[{"name":"spondyloepiphyseal dysplasia with punctate corneal dystrophy","type":"exact"},{"name":"spondyloepiphyseal dysplasia, Byers type","type":"exact"}],"termid":"MONDO:0008470","xrefs":{"Monarch":{"xref_id":"0008470"}}}


id: GO:1904991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase-inhibiting dopamine receptor signaling pathway.","definition_xrefs":["PMID:26554819","GOC:TermGenie","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dopamine receptor signaling pathway","termid":"GO:0060160"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:1904990"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:0007195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"down regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"down regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"down regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"down regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"down regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"down-regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"down-regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"down-regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"down-regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"down-regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"downregulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"downregulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"downregulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"downregulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"downregulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"narrow"},{"name":"inhibition of dopamine receptor, adenylate cyclase inhibiting pathway","type":"narrow"},{"name":"inhibition of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"narrow"},{"name":"inhibition of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"inhibition of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"narrow"},{"name":"negative regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"negative regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"negative regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"negative regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:1904991"}


id: PBO:0049087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 142","termid":"PBO:0049087"}


id: PBO:0074482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 1","termid":"PBO:0074482"}


id: MONDO:0007004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Group of diseases mediated by the deposition of large soluble complexes of antigen and antibody with resultant damage to tissue. Besides serum sickness and the arthus reaction, evidence supports a pathogenic role for immune complexes in many other immune system diseases including glomerulonephritis, systemic lupus erythematosus (lupus erythematosus, systemic) and polyarteritis nodosa.","definition_xrefs":["MESH:D007105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type III hypersensitivity disease","secondary_identifiers":["EFO:1001222","MEDGEN:7021","UMLS:C0020951","MedDRA:10045265","NCIT:C114346","DOID:1557"],"synonyms":[{"name":"disorder of type III hypersensitivity","type":"exact"},{"name":"hypersensitivity reaction type III disease","type":"related"},{"name":"immune complex disease","type":"exact"},{"name":"type 3 hypersensitivity reaction","type":"exact"},{"name":"type III hypersensitivity","type":"exact"},{"name":"type III hypersensitivity reaction","type":"exact"}],"termid":"MONDO:0007004","xrefs":{"Monarch":{"xref_id":"0007004"}}}


id: MONDO:0022715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Chiari malformation","termid":"MONDO:0000115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chiari malformation type 3","secondary_identifiers":["MEDGEN:148202","SCTID:253186001","UMLS:C0750931"],"synonyms":[{"name":"Arnold Chiari malformation type III","type":"related"},{"name":"Chiari malformation type III","type":"related"},{"name":"Chiari type III malformation","type":"related"}],"termid":"MONDO:0022715","xrefs":{"Monarch":{"xref_id":"0022715"}}}


id: PBO:0036246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy/CVT pathway ENTH/VHS domain protein Irs4 (predicted)","termid":"PBO:0036246"}


id: PBO:0084467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKK involved in the protein kinase C signaling pathway; involved in control of cell integrity; upon activation by Bck1p phosphorylates downstream target, Slt2p; functionally redundant with Mkk1p; MKK2 has a paralog, MKK1, that arose from the whole genome duplication","termid":"PBO:0084467"}


id: PBO:0073140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B3, pseudogene","termid":"PBO:0073140"}


id: GO:0034467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an esterosome.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"esterosome","termid":"GO:0033117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"esterosome lumen","termid":"GO:0034467"}


id: PBO:0069949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1242, pseudogene","termid":"PBO:0069949"}


id: GO:0044472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of a calcium channel in the bitten organism.","definition_xrefs":["GOC:fj","PMID:20920515","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of ion channel activity in another organism","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044472"}


id: GO:0002583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen","synonyms":[{"name":"regulation of peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0002583"}


id: PBO:0030300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_actin_cortical_patch_localization_to_either_end","termid":"PBO:0030300"}


id: PBO:0058643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6772","termid":"PBO:0058643"}


id: PBO:0108922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMX1 pseudogene 2","termid":"PBO:0108922"}


id: PBO:0028799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_arrest","termid":"PBO:0028799"}


id: MONDO:0033569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 49","secondary_identifiers":["OMIM:619024","UMLS:C5436616","DOID:0112110","MEDGEN:1762338"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 49","type":"related"},{"name":"COXPD49","type":"related"}],"termid":"MONDO:0033569","xrefs":{"Monarch":{"xref_id":"0033569"}}}


id: PBO:0052152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 2","termid":"PBO:0052152"}


id: PBO:0038643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 11","termid":"PBO:0038643"}


id: GO:0006798
data:
  {"annotated_genes":["SJAG_03964","SJAG_00132","SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95294,111238,115296],"is_not":false,"summary":null,"term":"GO:0006798"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a polyphosphate, the anion or salt of polyphosphoric acid.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyphosphate metabolic process","termid":"GO:0006797"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00132":null,"SJAG_00570":null,"SJAG_03964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"polyphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyphosphate breakdown","type":"exact"},{"name":"polyphosphate catabolism","type":"exact"},{"name":"polyphosphate degradation","type":"exact"}],"termid":"GO:0006798","terms_by_termid":{"GO:0006798":null}}


id: PBO:0046678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETAA1 activator of ATR kinase","termid":"PBO:0046678"}


id: PBO:0048640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 10","termid":"PBO:0048640"}


id: PBO:0084804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress","termid":"PBO:0084804"}


id: GO:0140012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H4 acetylated at lysine 5.","definition_xrefs":["PMID:20709061","PMID:18406326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 reader activity","termid":"GO:0140008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0030674","GO:0140566","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"histone H4K5ac reader activity","synonyms":[{"name":"H4K5ac modified histone binding","type":"narrow"}],"termid":"GO:0140012"}


id: FYPO:0009094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing lysine and proline as the nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth on lysine and proline nitrogen source","synonyms":[{"name":"increased vegetative cell growth on lysine and proline nitrogen source","type":"exact"}],"termid":"FYPO:0009094"}


id: PR:Q9USP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongator complex protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12896:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.06c","secondary_identifiers":["UniProtKB:Q9USP1"],"synonyms":[{"name":"SPCC11E10.06c","type":"related"},{"name":"Spom972h-ELP4","type":"exact"}],"termid":"PR:Q9USP1"}


id: GO:1900552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving asperfuranone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"asperfuranone metabolic process","synonyms":[{"name":"asperfuranone metabolism","type":"exact"}],"termid":"GO:1900552"}


id: PBO:0060775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B8 pseudogene 1","termid":"PBO:0060775"}


id: PBO:0038342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lays_eggs_on","termid":"PBO:0038342"}


id: GO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of galactose that leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by galactose","termid":"GO:0000409"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription","termid":"GO:0045013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite repression of transcription by galactose","synonyms":[{"name":"down regulation of transcription by galactose","type":"exact"},{"name":"down-regulation of transcription by galactose","type":"exact"},{"name":"downregulation of transcription by galactose","type":"exact"},{"name":"inhibition of transcription by galactose","type":"narrow"}],"termid":"GO:0000410"}


id: GO:1904738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a vascular associated smooth muscle cell from one site to another.","definition_xrefs":["GOC:rph","GO_REF:0000091","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:20693317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell migration","termid":"GO:0014909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell migration","synonyms":[{"name":"vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904738"}


id: PBO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sodium ion/proton antiporter Sod2","termid":"PBO:0000101"}


id: PBO:0082886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; interacts with cyclin-dependent kinase Pho85p; regulates the response to nutrient levels and environmental conditions, including the response to phosphate limitation and stress-dependent calcium signaling","termid":"PBO:0082886"}


id: GO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron that is part of the brainstem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noradrenergic neuron fate commitment","termid":"GO:0003359"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation involved in brainstem development","termid":"GO:0003361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron fate commitment involved in brainstem development","termid":"GO:0003362"}


id: SO:0001254
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is an exact multiple of the haploid number and is greater than the diploid number.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_number_variation","termid":"SO:1000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Polyploid"],"termid":"SO:0001254"}


id: PBO:0064926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 catalytic subunit pseudogene","termid":"PBO:0064926"}


id: MONDO:0001149
data:
  {"annotated_genes":["SJAG_00768","SJAG_04699","SJAG_01082","SJAG_04259","SJAG_01756","SJAG_02737","SJAG_03161","SJAG_03617","SJAG_05245","SJAG_02680","SJAG_04745","SJAG_03891","SJAG_00835","SJAG_04070","SJAG_00773","SJAG_01293","SJAG_00856","SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011790"},{"annotations":[86778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008872"},{"annotations":[85052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054593"},{"annotations":[84608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054716"},{"annotations":[85521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054761"},{"annotations":[85545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054804"},{"annotations":[85546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054806"},{"annotations":[85915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032583"},{"annotations":[85883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030339"},{"annotations":[85274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031060"},{"annotations":[85233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011488"},{"annotations":[85136,85137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859342"},{"annotations":[84787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011437"},{"annotations":[86783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009624"},{"annotations":[84781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014592"},{"annotations":[86005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[85684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013254"}]},"cv_name":"mondo","definition":"A congenital or acquired developmental disorder in which the circumference of the head is smaller than normal for the person's age and sex.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00768":null,"SJAG_00773":null,"SJAG_00835":null,"SJAG_00856":null,"SJAG_01082":null,"SJAG_01293":null,"SJAG_01756":null,"SJAG_02246":null,"SJAG_02680":null,"SJAG_02737":null,"SJAG_03161":null,"SJAG_03617":null,"SJAG_03891":null,"SJAG_04070":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04745":null,"SJAG_05245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:742.1","UMLS:C4551563","HP:0000252","SCTID:1829003","MESH:D008831","icd11.foundation:179350437","NCIT:C85874","MEDGEN:1644158","DOID:10907"],"synonyms":[{"name":"microcephalus","type":"exact"},{"name":"microcephaly","type":"exact"},{"name":"microcephaly (disease)","type":"exact"},{"name":"microencephaly","type":"exact"}],"termid":"MONDO:0001149","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008872":null,"MONDO:0009624":null,"MONDO:0011437":null,"MONDO:0011488":null,"MONDO:0011790":null,"MONDO:0013254":null,"MONDO:0014592":null,"MONDO:0030339":null,"MONDO:0031060":null,"MONDO:0032583":null,"MONDO:0054593":null,"MONDO:0054716":null,"MONDO:0054761":null,"MONDO:0054804":null,"MONDO:0054806":null,"MONDO:0859342":null},"xrefs":{"Monarch":{"xref_id":"0001149"}}}


id: GO:0016476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the surface configuration of an embryonic cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic cell shape","synonyms":[{"name":"shape changes of embryonic cells","type":"related"}],"termid":"GO:0016476"}


id: MONDO:0020257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculomotor palsy that arises from lesions in the supranuclear pathways controlling extraocular movement.","direct_ancestors":[{"relation_name":"is_a","term_name":"oculomotor nerve paralysis","termid":"MONDO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supranuclear oculomotor palsy","secondary_identifiers":["GARD:19546","Orphanet:98687","UMLS:C5681698","MEDGEN:1842980"],"synonyms":[{"name":"conjugate gaze palsy","type":"related"},{"name":"gaze palsy","type":"related"},{"name":"supranuclear disorder of eye movement","type":"related"},{"name":"supranuclear eye movement disorder","type":"exact"},{"name":"supranuclear ocular palsy","type":"related"}],"termid":"MONDO:0020257","xrefs":{"Monarch":{"xref_id":"0020257"}}}


id: PBO:0064876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R35 antisense RNA 1","termid":"PBO:0064876"}


id: PBO:0001405
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"targets correlated with Clr3 and Sir2 targets","termid":"PBO:0001405"}


id: PBO:0056692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic double-stranded break formation protein 4","termid":"PBO:0056692"}


id: GO:0007388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of cell identity in the posterior compartments of the segmented embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compartment pattern specification","termid":"GO:0007386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior compartment specification","termid":"GO:0007388"}


id: GO:1903896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the IRE1-mediated unfolded protein response.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:TermGenie","GOC:bf","PMID:22013210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900103"},{"relation_name":"is_a","term_name":"regulation of IRE1-mediated unfolded protein response","termid":"GO:1903894"},{"relation_name":"positively_regulates","term_name":"IRE1-mediated unfolded protein response","termid":"GO:0036498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of IRE1-mediated unfolded protein response","synonyms":[{"name":"activation of IRE1 branch of UPR","type":"narrow"},{"name":"activation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"activation of IRE1-mediated unfolded protein response","type":"narrow"},{"name":"activation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"activation of IRE1p unfolded protein response","type":"narrow"},{"name":"activation of UPR signaling by IRE1 stress sensor","type":"narrow"},{"name":"activation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"narrow"},{"name":"activation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"positive regulation of ERN1-mediated unfolded protein response","type":"related"},{"name":"positive regulation of IRE1 branch of UPR","type":"exact"},{"name":"positive regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"positive regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"positive regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"positive regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"positive regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"up regulation of IRE1 branch of UPR","type":"exact"},{"name":"up regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"up regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"up regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"up regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"up regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"up regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"up-regulation of IRE1 branch of UPR","type":"exact"},{"name":"up-regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up-regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"up-regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"up-regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"up-regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"up-regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"upregulation of IRE1 branch of UPR","type":"exact"},{"name":"upregulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"upregulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"upregulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"upregulation of IRE1p unfolded protein response","type":"narrow"},{"name":"upregulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"upregulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"upregulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:1903896"}


id: PBO:0080328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 92 pseudogene","termid":"PBO:0080328"}


id: PBO:0004227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease catalytic subunit Sen34 (predicted)","termid":"PBO:0004227"}


id: GO:0004148
data:
  {"annotated_genes":["SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86947],"is_not":false,"summary":null,"term":"GO:0004148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+.","definition_xrefs":["EC:1.8.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydrolipoyl dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9858589","Reactome:R-HSA-1222412","Reactome:R-HSA-9861616","Reactome:R-HSA-9853499","Reactome:R-HSA-9907572","Reactome:R-HSA-5694018","MetaCyc:1.8.1.4-RXN","RHEA:15045","Reactome:R-HSA-9859172"],"synonyms":[{"name":"E3 component of alpha-ketoacid dehydrogenase complexes activity","type":"related"},{"name":"L-protein activity","type":"related"},{"name":"LDP-Glc activity","type":"narrow"},{"name":"LDP-Val activity","type":"narrow"},{"name":"dehydrolipoate dehydrogenase activity","type":"related"},{"name":"diaphorase activity","type":"related"},{"name":"dihydrolipoamide dehydrogenase activity","type":"related"},{"name":"dihydrolipoamide reduction","type":"related"},{"name":"dihydrolipoamide:NAD+ oxidoreductase","type":"related"},{"name":"dihydrolipoic dehydrogenase activity","type":"related"},{"name":"dihydrolipoylprotein reduction","type":"related"},{"name":"dihydrothioctic dehydrogenase activity","type":"related"},{"name":"glycine-cleavage system L-protein activity","type":"related"},{"name":"lipoamide dehydrogenase (NADH) activity","type":"related"},{"name":"lipoamide oxidoreductase (NADH) activity","type":"related"},{"name":"lipoamide reductase (NADH) activity","type":"related"},{"name":"lipoamide reductase activity","type":"related"},{"name":"lipoate dehydrogenase activity","type":"related"},{"name":"lipoic acid dehydrogenase activity","type":"related"},{"name":"lipoyl dehydrogenase activity","type":"related"},{"name":"protein-6-N-(dihydrolipoyl)lysine:NAD+ oxidoreductase","type":"related"},{"name":"protein-N6-(dihydrolipoyl)lysine:NAD+ oxidoreductase","type":"related"}],"termid":"GO:0004148","terms_by_termid":{"GO:0004148":null}}


id: GO:0032734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-11 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-11 production","termid":"GO:0032654"},{"relation_name":"positively_regulates","term_name":"interleukin-11 production","termid":"GO:0032614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-11 production","secondary_identifiers":["GO:0045365","GO:0150171"],"synonyms":[{"name":"activation of interleukin-11 production","type":"narrow"},{"name":"positive regulation of IL-11 production","type":"exact"},{"name":"positive regulation of interleukin-11 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-11 secretion","type":"narrow"},{"name":"stimulation of interleukin-11 production","type":"narrow"},{"name":"up regulation of interleukin-11 production","type":"exact"},{"name":"up-regulation of interleukin-11 production","type":"exact"},{"name":"upregulation of interleukin-11 production","type":"exact"}],"termid":"GO:0032734"}


id: PBO:0059281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L39","termid":"PBO:0059281"}


id: PBO:0028074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_cut","termid":"PBO:0028074"}


id: GO:0052237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis in other organism involved in symbiotic interaction (obsolete GO:0052237)","synonyms":[{"name":"aerotaxis in other organism during symbiotic interaction","type":"related"},{"name":"aerotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052237"}


id: PATO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000227 motor performance (obsolete PATO:0000227)","termid":"PATO:0000227"}


id: PBO:0090136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein disulfide isomerase Pdi2","termid":"PBO:0090136"}


id: MONDO:0021580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the jaw skeleton.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"},{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of jaw","secondary_identifiers":["SCTID:126634001","ICD9:239.89","MEDGEN:43991","UMLS:C0022364"],"synonyms":[{"name":"jaw skeleton neoplasm","type":"exact"},{"name":"jaw skeleton neoplasm (disease)","type":"exact"},{"name":"jaw skeleton tumor","type":"exact"},{"name":"jaw skeleton tumour","type":"exact"},{"name":"neoplasm of jaw skeleton","type":"exact"},{"name":"tumor of jaw skeleton","type":"exact"},{"name":"tumour of jaw skeleton","type":"exact"}],"termid":"MONDO:0021580","xrefs":{"Monarch":{"xref_id":"0021580"}}}


id: GO:0099156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling in which the ligand is carried between cells by an exosome.","definition_xrefs":["GOC:dos","PMID:19837038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling via exosome","synonyms":[{"name":"exosome mediated","type":"exact"}],"termid":"GO:0099156"}


id: PBO:0081972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2","termid":"PBO:0081972"}


id: GO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, core RNA polymerase II binding (obsolete GO:0000991)","synonyms":[{"name":"core RNA polymerase II binding transcription factor activity","type":"exact"}],"termid":"GO:0000991"}


id: GO:1903280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of calcium:sodium antiporter activity.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","PMID:19683723","GO_REF:0000059","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium:sodium antiporter activity (obsolete GO:1903280)","synonyms":[{"name":"down regulation of calcium:sodium antiporter activity","type":"exact"},{"name":"down regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"down regulation of sodium/calcium exchanger","type":"exact"},{"name":"down regulation of sodium:calcium exchange","type":"related"},{"name":"down-regulation of calcium:sodium antiporter activity","type":"exact"},{"name":"down-regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"down-regulation of sodium/calcium exchanger","type":"exact"},{"name":"down-regulation of sodium:calcium exchange","type":"related"},{"name":"downregulation of calcium:sodium antiporter activity","type":"exact"},{"name":"downregulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"downregulation of sodium/calcium exchanger","type":"exact"},{"name":"downregulation of sodium:calcium exchange","type":"related"},{"name":"inhibition of calcium:sodium antiporter activity","type":"narrow"},{"name":"inhibition of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"inhibition of sodium/calcium exchanger","type":"narrow"},{"name":"inhibition of sodium:calcium exchange","type":"related"},{"name":"negative regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"negative regulation of sodium/calcium exchanger","type":"exact"},{"name":"negative regulation of sodium:calcium exchange","type":"related"}],"termid":"GO:1903280"}


id: PBO:0085899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in chitin biosynthesis by regulation of Chs3p export from the ER; relocalizes from bud neck to ER upon DNA replication stress","termid":"PBO:0085899"}


id: PBO:0083779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nucleolar protein required for 40S ribosome biogenesis; associate with snR30; physically and functionally interacts with Krr1p","termid":"PBO:0083779"}


id: GO:1904205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle hypertrophy.","definition_xrefs":["GOC:TermGenie","PMID:23470307","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle hypertrophy","termid":"GO:0014741"},{"relation_name":"is_a","term_name":"negative regulation of muscle adaptation","termid":"GO:0014745"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle hypertrophy","termid":"GO:1904204"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle hypertrophy","termid":"GO:0014734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle hypertrophy","synonyms":[{"name":"down regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"down-regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"downregulation of skeletal muscle hypertrophy","type":"exact"},{"name":"inhibition of skeletal muscle hypertrophy","type":"narrow"}],"termid":"GO:1904205"}


id: GO:0000192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of a MAP kinase kinase in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK (pseudohyphal growth) (obsolete GO:0000192)","synonyms":[{"name":"activation of MAPKK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000192"}


id: PBO:0059363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18A","termid":"PBO:0059363"}


id: GO:0097212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lysosomal membrane. A lysosomal membrane is the lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.","definition_xrefs":["PMID:20544854","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"lysosome organization","termid":"GO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"lysosomal membrane organization","synonyms":[{"name":"lysosomal membrane organisation","type":"exact"},{"name":"lysosome membrane organization","type":"exact"}],"termid":"GO:0097212"}


id: MONDO:0001982
data:
  {"annotated_genes":["SJAG_01407","SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[85731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[85724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"}]},"cv_name":"mondo","definition":"A group of inherited, severe metabolic disorders in which sphingomyelin accumulates in lysosomes in cells. The lysosomes normally transport material through and out of the cell.","definition_xrefs":["Wikipedia:Niemann%E2%80%93Pick_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"},{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_01407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0002561","MONDO:0005046"],"is_obsolete":false,"name":"Niemann-Pick disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C61269","MEDGEN:10348","UMLS:C0028064","SCTID:58459009","NANDO:2200561","icd11.foundation:398872780","DOID:14504","GARD:13334","MESH:D009542","EFO:1001380"],"synonyms":[{"name":"Niemann-Pick disease with cholesterol esterification block","type":"exact"},{"name":"Niemann-Pick disease, subacute juvenile form","type":"exact"},{"name":"lipoid histiocytosis","type":"exact"},{"name":"lipoid histiocytosis (classical phosphatide)","type":"exact"},{"name":"sphingomyelin lipidosis","type":"exact"},{"name":"sphingomyelin/cholesterol lipidosis","type":"exact"},{"name":"sphingomyelinase deficiency disease","type":"exact"},{"name":"type A Niemann-Pick disease","type":"narrow"}],"termid":"MONDO:0001982","terms_by_termid":{"MONDO:0009756":null,"MONDO:0011871":null,"MONDO:0011873":null},"xrefs":{"Monarch":{"xref_id":"0001982"}}}


id: PBO:0082652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Shu complex (aka PCSS complex); Shu complex also includes Shu1, Csm2, Shu2, and promotes error-free DNA repair; promotes Rad51p filament assembly; Shu complex mediates inhibition of Srs2p function; Psy3p and Csm2p contain similar DNA-binding regions which work together to form a single DNA binding site; deletion of PSY3 results in a mutator phenotype; deletion increases sensitivity to anticancer drugs oxaliplatin and cisplatin but not mitomycin C","termid":"PBO:0082652"}


id: PBO:0048698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomulin, FKBP associated protein","termid":"PBO:0048698"}


id: GO:0010768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a UV damage stimulus.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage (obsolete GO:0010768)","termid":"GO:0010768"}


id: GO:0005988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactose, the disaccharide galactopyranosyl-glucose.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"lactose metabolic process","synonyms":[{"name":"lactose metabolism","type":"exact"}],"termid":"GO:0005988"}


id: MONDO:0021481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the submandibular gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"submandibular gland neoplasm","termid":"MONDO:0021244"},{"relation_name":"is_a","term_name":"benign neoplasm of major salivary gland","termid":"MONDO:0021492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of submandibular gland","secondary_identifiers":["icd11.foundation:564841249","NCIT:C4891","MEDGEN:151936","SCTID:92415001","UMLS:C0685988"],"synonyms":[{"name":"benign neoplasm of the submandibular gland","type":"exact"},{"name":"benign submandibular gland neoplasm","type":"exact"},{"name":"benign submandibular gland tumor","type":"exact"},{"name":"benign submandibular gland tumour","type":"exact"},{"name":"benign tumor of submandibular gland","type":"exact"},{"name":"benign tumor of the submandibular gland","type":"exact"},{"name":"benign tumour of submandibular gland","type":"exact"},{"name":"benign tumour of the submandibular gland","type":"exact"},{"name":"submandibular gland benign neoplasm","type":"exact"}],"termid":"MONDO:0021481","xrefs":{"Monarch":{"xref_id":"0021481"}}}


id: PBO:0080017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 3","termid":"PBO:0080017"}


id: MOD:00518
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:150","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc2dHex2 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(2)dHex(2)","type":"related"},{"name":"HexNAc2dHex2","type":"related"}],"termid":"MOD:00518"}


id: PBO:0026847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_tRNA_gene","termid":"PBO:0026847"}


id: GO:1903020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycoprotein metabolic process.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:rl","PMID:23544079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"is_a","term_name":"regulation of glycoprotein metabolic process","termid":"GO:1903018"},{"relation_name":"positively_regulates","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycoprotein metabolic process","synonyms":[{"name":"activation of glycoprotein metabolic process","type":"narrow"},{"name":"activation of glycoprotein metabolism","type":"narrow"},{"name":"positive regulation of glycoprotein metabolism","type":"exact"},{"name":"up regulation of glycoprotein metabolic process","type":"exact"},{"name":"up regulation of glycoprotein metabolism","type":"exact"},{"name":"up-regulation of glycoprotein metabolic process","type":"exact"},{"name":"up-regulation of glycoprotein metabolism","type":"exact"},{"name":"upregulation of glycoprotein metabolic process","type":"exact"},{"name":"upregulation of glycoprotein metabolism","type":"exact"}],"termid":"GO:1903020"}


id: GO:0018493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formylmethanofuran + A + H2O + H+ = AH(2) + CO2 + methanofuran.","definition_xrefs":["RHEA:19841","EC:1.2.7.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"formylmethanofuran dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0345","KEGG_REACTION:R03015","MetaCyc:FORMYLMETHANOFURAN-DEHYDROGENASE-RXN"],"synonyms":[{"name":"formylmethanofuran:(acceptor) oxidoreductase activity","type":"related"},{"name":"formylmethanofuran:acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0018493"}


id: MONDO:0002892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow-growing malignant bone tumor arising from the remnants of the notochord and occurring in the base of the skull. It is characterized by a lobulated growth pattern, myxoid stroma formation, and the presence of physaliphorous cells..","definition_xrefs":["NCIT:C5453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull cancer","termid":"MONDO:0002132"},{"relation_name":"is_a","term_name":"skull base neoplasm","termid":"MONDO:0002785"},{"relation_name":"is_a","term_name":"chordoma","termid":"MONDO:0008978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"skull base chordoma","secondary_identifiers":["MEDGEN:233448","UMLS:C1335975","DOID:4151"],"synonyms":[{"name":"chordoma of skull base","type":"exact"},{"name":"chordoma of the skull base","type":"exact"},{"name":"skull base chordoma","type":"exact"}],"termid":"MONDO:0002892","xrefs":{"Monarch":{"xref_id":"0002892"}}}


id: FYPO:0002020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation","type":"related"},{"name":"increased RNA level during nitrogen depletion","type":"exact"},{"name":"increased RNA level during nitrogen deprivation","type":"exact"},{"name":"increased transcript level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0002020"}


id: GO:0048730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the epidermis are generated and organized. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species.","definition_xrefs":["GOC:jid","UBERON:0001003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermis morphogenesis","synonyms":[{"name":"hypodermis morphogenesis","type":"related"}],"termid":"GO:0048730"}


id: MONDO:0008669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"},{"relation_name":"is_a","term_name":"vulvovaginitis","termid":"MONDO:0007019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"vulvovaginitis, allergic seminal","secondary_identifiers":["UMLS:C1860357","MEDGEN:348089","MESH:C565993","OMIM:193450"],"synonyms":[{"name":"vulvovaginitis, allergic seminal","type":"exact"}],"termid":"MONDO:0008669","xrefs":{"Monarch":{"xref_id":"0008669"}}}


id: MONDO:0016949
data:
  {"annotated_genes":["SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"}]},"cv_name":"mondo","definition":"Chromosome 16p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 16. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 16p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 16","termid":"MONDO:0016934"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01286":null},"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:325064766","MEDGEN:208643","Orphanet:262794","UMLS:C0795861","GARD:5315"],"synonyms":[{"name":"16p duplication","type":"related"},{"name":"16p trisomy","type":"related"},{"name":"Duplication 16p","type":"related"},{"name":"chromosome 16p duplication","type":"related"},{"name":"partial duplication of chromosome 16p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 16","type":"exact"},{"name":"partial trisomy 16p","type":"related"},{"name":"partial trisomy of chromosome 16p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 16","type":"exact"},{"name":"trisomy 16p","type":"related"}],"termid":"MONDO:0016949","terms_by_termid":{"MONDO:0011402":null},"xrefs":{"Monarch":{"xref_id":"0016949"}}}


id: MONDO:0009823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder of glyoxylate metabolism characterized by the accumulation of oxalate due to a deficiency of the peroxisomal hepatic enzyme L-alanine: glyoxylate aminotransferase (AGT). Clinical presentation is variable, ranging from occasional symptomatic nephrolithiasis to nephrocalcinosis and end-stage renal disease with systemic involvement.","definition_xrefs":["Orphanet:93598"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of peroxisomal alpha-, beta- and omega-oxidation (obsolete MONDO:0017753)","termid":"MONDO:0017753"},{"relation_name":"is_a","term_name":"primary hyperoxaluria","termid":"MONDO:0002474"},{"relation_name":"is_a","term_name":"alanine glyoxylate aminotransferase deficiency","termid":"MONDO:0100278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"primary hyperoxaluria type 1","secondary_identifiers":["SCTID:65520001","UMLS:C0268164","GARD:2835","icd11.foundation:692812009","NANDO:1200773","DOID:0111670","MESH:C536414","OMIM:259900","ICD9:271.8","MEDGEN:75658","NCIT:C123212"],"synonyms":[{"name":"AGXT primary hyperoxaluria","type":"exact"},{"name":"HP1","type":"related"},{"name":"Oxalosis 1","type":"related"},{"name":"PH1","type":"exact"},{"name":"alanine-glyoxylate aminotransferase deficiency","type":"related"},{"name":"glycolic aciduria","type":"exact"},{"name":"hepatic AGT deficiency","type":"related"},{"name":"hyperoxaluria, primary, type 1","type":"related"},{"name":"hyperoxaluria, primary, type I","type":"related"},{"name":"peroxisomal alanine glyoxylate aminotransferase deficiency","type":"related"},{"name":"peroxisomal alanine-glyoxylate aminotransferase deficiency","type":"exact"},{"name":"peroxisomal alanine:glyoxylate aminotransferase deficiency","type":"related"},{"name":"primary hyperoxaluria caused by mutation in AGXT","type":"exact"},{"name":"primary hyperoxaluria type 1","type":"exact"},{"name":"primary hyperoxaluria type I","type":"exact"},{"name":"serine pyruvate aminotransferase deficiency","type":"related"},{"name":"serine:pyruvate aminotransferase deficiency","type":"related"}],"termid":"MONDO:0009823","xrefs":{"Monarch":{"xref_id":"0009823"}}}


id: PBO:0030462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_isochromosome_formation_with_preferential_breakage_in_the_imr_region","termid":"PBO:0030462"}


id: PBO:0080460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 4","termid":"PBO:0080460"}


id: PBO:0056203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A11","termid":"PBO:0056203"}


id: PR:P87294
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sub1 gene.","definition_xrefs":["UniProtKB:P87294","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcriptional coactivator (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.02","synonyms":[{"name":"Spom972h-sub1","type":"exact"}],"termid":"PR:P87294"}


id: MONDO:0971062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intellectual developmental disorder with language impairment and early-onset DOPA-responsive dystonia-parkinsonism in which the cause of the disease is a point mutation in the gene NR4A2.","definition_xrefs":["Orphanet:660012","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual developmental disorder with language impairment and early-onset DOPA-responsive dystonia-parkinsonism","termid":"MONDO:0859257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0003441","MONDO:0005066"],"is_obsolete":false,"name":"developmental delay-language impairment-dopa responsive dystonia-parkinsonism syndrome due to a NR4A2 point mutation","termid":"MONDO:0971062","xrefs":{"Monarch":{"xref_id":"0971062"}}}


id: SO:0100006
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of 3 consecutive residues with dihedral angles as follows: res i: phi -90 bounds -120 to -60, res i: psi -10 bounds -50 to 30, res i+1: phi -75 bounds -100 to -50, res i+1: psi 140 bounds 110 to 170. An extra restriction of the length of the O to O distance would be useful, that it be less than 5 Angstrom. More precisely these two oxygens are the main chain carbonyl oxygen atoms of residues i-1 and i+1.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"catmat_right_handed_three","synonyms":[{"name":"catmat-3r","type":"exact"}],"termid":"SO:0100006"}


id: GO:0034741
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the tumor suppressor protein adenomatous polyposis coli (APC), alpha-tubulin, gamma-tubulin, and the Rac1 and Cdc42 effector IQGAP1; may play a role in cytoskeleton organization.","definition_xrefs":["PMID:17126424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"APC-tubulin-IQGAP1 complex","synonyms":[{"name":"60S APC complex","type":"narrow"}],"termid":"GO:0034741"}


id: MONDO:0019039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hemorrhagic disorder due to a constitutional coagulation factors defect (obsolete MONDO:0019039)","secondary_identifiers":["Orphanet:68334"],"synonyms":[{"name":"rare bleeding disorder due to a constitutional coagulation factors defect","type":"exact"},{"name":"rare coagulopathy due to a constitutional coagulation factors defect","type":"exact"}],"termid":"MONDO:0019039","xrefs":{"Monarch":{"xref_id":"0019039"}}}


id: PBO:0057894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3198-1","termid":"PBO:0057894"}


id: GO:0099137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a chimeric, non-reproductive fruiting body in which cells of all genotypes have an equal chance of becoming a spore cell.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric non-reproductive fruiting body development","termid":"GO:0099136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"altruistic, chimeric, non-reproductive fruiting body development","synonyms":[{"name":"fully co-operative, chimeric, non-reproductive fruiting body development","type":"exact"}],"termid":"GO:0099137"}


id: PBO:0043231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 3","termid":"PBO:0043231"}


id: PBO:0040175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNS pseudogene 6","termid":"PBO:0040175"}


id: GO:0070408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbamoyl phosphate, an intermediate in the urea cycle and other nitrogen compound metabolic pathways.","definition_xrefs":["GOC:rph","CHEBI:17672","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbamoyl phosphate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:bzn"],"synonyms":[{"name":"carbamoyl phosphate metabolism","type":"exact"}],"termid":"GO:0070408"}


id: PBO:0046340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase family member 5","termid":"PBO:0046340"}


id: PBO:0046742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 1 like","termid":"PBO:0046742"}


id: GO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Increase in abundance of circular DNA molecules in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete extrachromosomal circular DNA accumulation involved in replicative cell aging (obsolete GO:0001307)","synonyms":[{"name":"extrachromosomal circular DNA accumulation during replicative cell ageing","type":"related"},{"name":"extrachromosomal circular DNA accumulation during replicative cell aging","type":"related"}],"termid":"GO:0001307"}


id: GO:0060779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secondary leaflet attains its shape. A secondary leaflet develops by branching or division of a primary leaflet.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary leaflet morphogenesis","termid":"GO:0060779"}


id: PBO:0052926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-9, pseudogene","termid":"PBO:0052926"}


id: GO:2000971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of detection of glucose.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of detection of glucose","termid":"GO:2000970"},{"relation_name":"negatively_regulates","term_name":"detection of glucose","termid":"GO:0051594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of detection of glucose","synonyms":[{"name":"negative regulation of glucose detection","type":"exact"},{"name":"negative regulation of glucose perception","type":"related"},{"name":"negative regulation of glucose sensing","type":"related"}],"termid":"GO:2000971"}


id: GO:1901412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole biosynthetic process from glutamate.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glutamate","termid":"GO:1901410"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"is_a","term_name":"positive regulation of glutamate metabolic process","termid":"GO:2000213"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole biosynthetic process from glutamate","termid":"GO:0033526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0033013","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"activation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"activation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"activation of tetrapyrrole biosynthetic process from glutamate","type":"narrow"},{"name":"activation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"activation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:1901412"}


id: FYPO:0007543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which double-stranded DNA binding by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished DNA binding","termid":"FYPO:0000659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000653","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished double-stranded DNA binding","synonyms":[{"name":"abolished dsDNA binding","type":"exact"},{"name":"double-stranded DNA binding abolished","type":"exact"}],"termid":"FYPO:0007543"}


id: PBO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (predicted)","termid":"PBO:0003175"}


id: PBO:0088568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp7","termid":"PBO:0088568"}


id: MONDO:0060554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital vertebral-cardiac-renal anomalies syndrome","termid":"MONDO:0020831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0006025"],"is_obsolete":false,"name":"vertebral, cardiac, renal, and limb defects syndrome 1","secondary_identifiers":["GARD:18508","UMLS:C4540004","OMIM:617660","MEDGEN:1621146"],"synonyms":[{"name":"3-hydroxyanthranilic acidemia","type":"related"},{"name":"VCRL1","type":"related"},{"name":"congenital NAD deficiency Disorder 1","type":"related"},{"name":"vertebral, cardiac, renal, and limb defects syndrome 1","type":"exact"}],"termid":"MONDO:0060554","xrefs":{"Monarch":{"xref_id":"0060554"}}}


id: PBO:0062743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 2 pseudogene","termid":"PBO:0062743"}


id: GO:0008846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of large proteins such as globin, casein and denatured serum albumin, in presence of ATP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endopeptidase La activity (obsolete GO:0008846)","synonyms":[{"name":"ATP-dependent lon proteinase","type":"narrow"},{"name":"ATP-dependent protease La activity","type":"related"},{"name":"ATP-dependent serine proteinase activity","type":"related"},{"name":"Escherichia coli proteinase La","type":"related"},{"name":"Escherichia coli serine proteinase La","type":"related"},{"name":"PIM1 protease activity","type":"related"},{"name":"PIM1 proteinase activity","type":"related"},{"name":"endopeptidase La activity","type":"exact"},{"name":"gene lon protease activity","type":"related"},{"name":"gene lon proteins","type":"related"},{"name":"lon proteinase","type":"narrow"},{"name":"protease La","type":"related"},{"name":"proteinase La","type":"related"},{"name":"serine protease La","type":"related"}],"termid":"GO:0008846"}


id: PBO:0111443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid family peptidase Rbd3","termid":"PBO:0111443"}


id: PBO:0047027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 91 member A2, pseudogene","termid":"PBO:0047027"}


id: PBO:0001107
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by temperature","termid":"PBO:0001107"}


id: MONDO:0015120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare acquired eye disease (obsolete MONDO:0015120)","secondary_identifiers":["Orphanet:101949"],"termid":"MONDO:0015120","xrefs":{"Monarch":{"xref_id":"0015120"}}}


id: GO:0071761
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgZ isotype and two identical immunoglobulin light chains, held together by disulfide bonds. The IgZ isotype is also known as the IgT isotype in certain species of fish.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgZ immunoglobulin complex","synonyms":[{"name":"IgT antibody","type":"narrow"},{"name":"IgT immunoglobulin complex","type":"exact"},{"name":"IgZ antibody","type":"narrow"}],"termid":"GO:0071761"}


id: GO:0005147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oncostatin-M receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"oncostatin-M receptor binding","synonyms":[{"name":"oncostatin-M","type":"narrow"},{"name":"oncostatin-M receptor ligand","type":"narrow"}],"termid":"GO:0005147"}


id: FYPO:0008201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell enters the meiotic cell cycle normally: i.e after conjugation with cellular fusion and karyogamy with nuclear fusion.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic cell cycle entry","termid":"FYPO:0008201"}


id: PBO:0039164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 7","termid":"PBO:0039164"}


id: FYPO:0004295
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[118823],"is_not":false,"summary":null,"term":"FYPO:0004295"},{"annotations":[118967,118966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype characterized by the presence of more than one septum in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"is_a","term_name":"septated cell","termid":"FYPO:0004296"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_04551":null},"genotype_count":4,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_00118"],"name":"multiseptate cell","references_by_uniquename":{"PMID:25866389":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00118","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","mid2delta","pmk1delta"],"termid":"FYPO:0004295","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000207":null,"FYPO:0000118":null,"FYPO:0004295":null,"FYPO_EXT:0000002":null}}


id: GO:1901951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterograde dense core granule transport.","definition_xrefs":["PMID:23358451","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"is_a","term_name":"regulation of dense core granule transport","termid":"GO:1904809"},{"relation_name":"regulates","term_name":"anterograde neuronal dense core vesicle transport","termid":"GO:1990048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of anterograde dense core granule transport","termid":"GO:1901951"}


id: PBO:0002645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 h3.1","termid":"PBO:0002645"}


id: GO:2000579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATP-dependent microtubule motor activity, minus-end-directed.","definition_xrefs":["GOC:vw","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of microtubule motor activity, minus-end-directed (obsolete GO:2000579)","synonyms":[{"name":"positive regulation of ATP-dependent microtubule motor activity, minus-end-directed","type":"exact"},{"name":"positive regulation of kinesin ATP phosphohydrolase (minus-end-directed)","type":"exact"},{"name":"positive regulation of minus-end-directed kinesin ATPase activity","type":"exact"},{"name":"positive regulation of minus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000579"}


id: GO:0007284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The mitotic divisions of the primary spermatogonial cell (a primordial male germ cell) to form secondary spermatogonia (primary spermatocytes).","definition_xrefs":["GOC:bf","GOC:pr","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatogonial cell division","synonyms":[{"name":"spermatogonium division","type":"exact"}],"termid":"GO:0007284"}


id: GO:0004608
data:
  {"annotated_genes":["SJAG_00825"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106860],"is_not":false,"summary":null,"term":"GO:0004608"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidylethanolamine = S-adenosyl-L-homocysteine + H+ + phosphatidyl-N-methylethanolamine.","definition_xrefs":["EC:2.1.1.17","RHEA:11164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylethanolamine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483174","KEGG_REACTION:R02056","MetaCyc:2.1.1.17-RXN"],"synonyms":[{"name":"LMTase activity","type":"related"},{"name":"PEMT","type":"related"},{"name":"S-adenosyl-L-methionine:phosphatidylethanolamine N-methyltransferase activity","type":"related"},{"name":"lipid methyl transferase activity","type":"related"},{"name":"phosphatidylethanolamine methyltransferase activity","type":"related"},{"name":"phosphatidylethanolamine-N-methylase activity","type":"related"},{"name":"phosphatidylethanolamine-S-adenosylmethionine methyltransferase activity","type":"related"}],"termid":"GO:0004608","terms_by_termid":{"GO:0004608":null}}


id: PBO:0073702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"src kinase associated phosphoprotein 2","termid":"PBO:0073702"}


id: PBO:0066755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 53","termid":"PBO:0066755"}


id: MONDO:0100445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by biallelic variants in the LCA5 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"LCA5-related retinopathy","synonyms":[{"name":"LCA5","type":"narrow"},{"name":"LCA5 Leber congenital amaurosis","type":"narrow"},{"name":"LCA5 retinopathy","type":"exact"},{"name":"LCA5-related retinopathy","type":"exact"},{"name":"Leber congenital amaurosis 5","type":"narrow"},{"name":"Leber congenital amaurosis caused by mutation in LCA5","type":"narrow"},{"name":"Leber congenital amaurosis type 5","type":"narrow"},{"name":"amaurosis congenita of Leber, type 5","type":"narrow"}],"termid":"MONDO:0100445","xrefs":{"Monarch":{"xref_id":"0100445"}}}


id: PBO:0004593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAseP RNAse MRP subunit Pop7 (predicted)","termid":"PBO:0004593"}


id: MONDO:0007181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial osteosclerosis","termid":"MONDO:0042973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axial osteomalacia","secondary_identifiers":["UMLS:C1862372","DOID:0080039","MEDGEN:354730","MESH:C537791","OMIM:109130"],"synonyms":[{"name":"atypical osteomalacia involving the axial skeleton","type":"related"},{"name":"axial osteomalacia","type":"exact"}],"termid":"MONDO:0007181","xrefs":{"Monarch":{"xref_id":"0007181"}}}


id: GO:0045724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation of a cilium.","definition_xrefs":["GOC:cilia","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of cilium assembly","termid":"GO:1902017"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cilium assembly","synonyms":[{"name":"activation of cilium assembly","type":"narrow"},{"name":"positive regulation of flagellum assembly","type":"broad"},{"name":"positive regulation of flagellum biogenesis","type":"related"},{"name":"stimulation of cilium assembly","type":"narrow"},{"name":"up regulation of cilium assembly","type":"exact"},{"name":"up-regulation of cilium assembly","type":"exact"},{"name":"upregulation of cilium assembly","type":"exact"}],"termid":"GO:0045724"}


id: PBO:0040961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 32","termid":"PBO:0040961"}


id: PBO:0071680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 12","termid":"PBO:0071680"}


id: PBO:0090227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial threonine-tRNA ligase","termid":"PBO:0090227"}


id: PBO:0045517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aminoacyl-tRNA deacylase 2","termid":"PBO:0045517"}


id: GO:0060363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which any suture between cranial bones is generated and organized.","definition_xrefs":["GOC:dph","GOC:pr","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial suture morphogenesis","termid":"GO:0097094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial suture morphogenesis","termid":"GO:0060363"}


id: PBO:0026707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_stalled_replication_fork","termid":"PBO:0026707"}


id: PR:Q9UTH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1786.02 gene.","definition_xrefs":["UniProtKB:Q9UTH5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase C1786.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1786.02","synonyms":[{"name":"Spom972h-SPAC1786.02","type":"exact"},{"name":"phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH5"}


id: PBO:0047399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 38","termid":"PBO:0047399"}


id: PR:Q09851
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinol dehydrogenase 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent 1-acyldihydroxyacetone phosphate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.11","secondary_identifiers":["UniProtKB:Q09851"],"synonyms":[{"name":"1-acyl DHAP reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ADR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC23D3.11","type":"related"},{"name":"Spom972h-RDH8","type":"exact"},{"name":"acyl/alkyl DHAP reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"acylglycerone-phosphate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09851"}


id: GO:1901392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta1 activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta1 activation (obsolete GO:1901392)","synonyms":[{"name":"regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"regulation of TGF-beta 1 activation","type":"exact"},{"name":"regulation of TGFB1 activation","type":"exact"},{"name":"regulation of TGFbeta 1 activation","type":"exact"},{"name":"regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"regulation of transforming growth factor-beta1 activation","type":"exact"}],"termid":"GO:1901392"}


id: GO:0030117
data:
  {"annotated_genes":["SJAG_04002","SJAG_03726","SJAG_02177","SJAG_04565","SJAG_04644","SJAG_02539","SJAG_00104","SJAG_04931","SJAG_00192","SJAG_02282","SJAG_03558","SJAG_01809","SJAG_04070","SJAG_05345","SJAG_05344","SJAG_00800","SJAG_01508","SJAG_02349","SJAG_02805","SJAG_04517","SJAG_03153","SJAG_03907","SJAG_04609","SJAG_00906","SJAG_01167","SJAG_04391","SJAG_00284","SJAG_04569","SJAG_02482","SJAG_00108","SJAG_02234","SJAG_04474","SJAG_00379","SJAG_00072","SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112439,100616,118315,112224],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[111041,95767,107790,111100],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[88417,95631,110943,93690],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030123"},{"annotations":[110946],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030131"},{"annotations":[94394,112348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030130"},{"annotations":[94395],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071439"},{"annotations":[117927,114322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030125"},{"annotations":[103601,98045,97956,106589,113190,102750,92728,115816,116843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030126"},{"annotations":[70953,106031,92860,109662,108185,95013,74688,111424,112155,116035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030127"}]},"cv_name":"cellular_component","definition":"Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"coated membrane","termid":"GO:0048475"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_00906":null,"SJAG_01167":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02805":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03726":null,"SJAG_03907":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_04931":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"membrane coat","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030117","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030123":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030131":null,"GO:0071439":null}}


id: PBO:0064093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pitrilysin metallopeptidase 1","termid":"PBO:0064093"}


id: PBO:0063270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 16","termid":"PBO:0063270"}


id: PBO:0065343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin like 2A","termid":"PBO:0065343"}


id: GO:0080040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to phosphate starvation.","definition_xrefs":["PMID:18315545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cellular response to phosphate starvation","termid":"GO:0140255"},{"relation_name":"positively_regulates","term_name":"cellular response to phosphate starvation","termid":"GO:0016036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to phosphate starvation","termid":"GO:0080040"}


id: PR:P47943
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1006.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P47943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase eIF4A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.07","synonyms":[{"name":"Spom972h-SPAC1006.07","type":"exact"},{"name":"eIF-4A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic initiation factor 4A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P47943"}


id: PBO:0002531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS domain","termid":"PBO:0002531"}


id: PBO:0087173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B12.6; contacts DNA; mutations affect transcription start site selection and fidelity of transcription","termid":"PBO:0087173"}


id: PBO:0082164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenylosuccinate lyase; catalyzes two steps in the 'de novo' purine nucleotide biosynthetic pathway; expression is repressed by adenine and activated by Bas1p and Pho2p; mutations in human ortholog ADSL cause adenylosuccinase deficiency; human ADSL can complement yeast ADE13 null mutant","termid":"PBO:0082164"}


id: FYPO:0003447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glycosylated protein measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of glycosylated protein in cell","synonyms":[{"name":"decreased accumulation of glycosylated protein in cell","type":"related"},{"name":"decreased cellular glycoprotein level","type":"exact"},{"name":"decreased glycosylated protein level during vegetative growth","type":"exact"},{"name":"decreased level of glycosylated protein in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of glycosylated protein in cell during vegetative growth","type":"exact"},{"name":"reduced level of glycosylated protein in cell","type":"exact"}],"termid":"FYPO:0003447"}


id: PR:000027505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase HOG1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitogen-activated protein kinase HOG1","termid":"PR:000027499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sty1/UnMod","pombase_gene_id":"SPAC24B11.06c","synonyms":[{"name":"PomBase_original_PRO_term_name: mitogen-activated protein kinase sty1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-HOG1/UnMod","type":"exact"},{"name":"sty1/UnMod","type":"exact"}],"termid":"PR:000027505"}


id: PBO:0004944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I and III subunit Rpc40","termid":"PBO:0004944"}


id: PBO:0074597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 9B","termid":"PBO:0074597"}


id: GO:1905235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a quercetin stimulus.","definition_xrefs":["PMID:24914722","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to flavonoid","termid":"GO:1905395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to quercetin","termid":"GO:1905235"}


id: PBO:0075266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 19","termid":"PBO:0075266"}


id: PBO:0059478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylsterol monooxygenase 1","termid":"PBO:0059478"}


id: MONDO:0034989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic multiple congenital anomalies/dysmorphic syndrome characterized by intrauterine and postnatal growth restriction, global developmental delay, intellectual disability, and dysmorphic facial features (such as broad nasal root, anteverted nares, long philtrum, low-set and posteriorly rotated ears, and short neck). Additional reported manifestations are microcephaly, short stature, vertebral abnormalities, joint laxity, ocular, cardiac, and renal defects, and minor limb anomalies. Brain imaging may show hypoplastic corpus callosum, delayed myelination, and cerebral atrophy.","definition_xrefs":["Orphanet:508498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-cardiac anomalies-short stature-joint laxity syndrome","secondary_identifiers":["MEDGEN:1799995","GARD:17948","UMLS:C5568572"],"termid":"MONDO:0034989","xrefs":{"Monarch":{"xref_id":"0034989"}}}


id: GO:0032712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-3 production","termid":"GO:0032672"},{"relation_name":"negatively_regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-3 production","secondary_identifiers":["GO:0045400"],"synonyms":[{"name":"down regulation of interleukin-3 production","type":"exact"},{"name":"down-regulation of interleukin-3 production","type":"exact"},{"name":"downregulation of interleukin-3 production","type":"exact"},{"name":"inhibition of interleukin-3 production","type":"narrow"},{"name":"negative regulation of IL-3 production","type":"exact"},{"name":"negative regulation of interleukin-3 biosynthetic process","type":"narrow"}],"termid":"GO:0032712"}


id: MONDO:0036483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 18 with polydactyly","secondary_identifiers":["MEDGEN:1632904","OMIM:617866","DOID:0080293","UMLS:C4693420"],"synonyms":[{"name":"SRTD18","type":"related"},{"name":"short-rib thoracic dysplasia 18 with polydactyly","type":"exact"}],"termid":"MONDO:0036483","xrefs":{"Monarch":{"xref_id":"0036483"}}}


id: PBO:0039214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C5, pseudogene","termid":"PBO:0039214"}


id: PBO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog Aah2 (predicted)","termid":"PBO:0002490"}


id: GO:0048670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of collateral sprouting.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of axonogenesis","termid":"GO:0050770"},{"relation_name":"is_a","term_name":"regulation of extent of cell growth","termid":"GO:0061387"},{"relation_name":"regulates","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collateral sprouting","termid":"GO:0048670"}


id: PBO:0057668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1260a","termid":"PBO:0057668"}


id: MONDO:0017493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fibular hemimelia","termid":"MONDO:0019672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibular hemimelia, bilateral","secondary_identifiers":["Orphanet:295083","icd11.foundation:1479927692"],"synonyms":[{"name":"fibular longitudinal meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017493","xrefs":{"Monarch":{"xref_id":"0017493"}}}


id: PBO:0077384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 125","termid":"PBO:0077384"}


id: GO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a leukocyte.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte mediated immunity","secondary_identifiers":["GO:0019723","GO:0042087"],"synonyms":[{"name":"cell-mediated immune response","type":"related"},{"name":"cellular immune response","type":"related"},{"name":"immune cell effector process","type":"exact"},{"name":"immune cell mediated immunity","type":"exact"},{"name":"leucocyte immune effector process","type":"exact"},{"name":"leucocyte mediated immunity","type":"exact"},{"name":"leukocyte immune effector process","type":"exact"}],"termid":"GO:0002443"}


id: GO:1902869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amacrine cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:16872597","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"amacrine cell differentiation","termid":"GO:0035881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amacrine cell differentiation","synonyms":[{"name":"regulation of amacrine neuron differentiation","type":"exact"}],"termid":"GO:1902869"}


id: PBO:0052739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 31","termid":"PBO:0052739"}


id: GO:0046630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a gamma-delta T cell population by cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"},{"relation_name":"is_a","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell proliferation","synonyms":[{"name":"gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"gamma-delta T-cell proliferation","type":"exact"},{"name":"gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046630"}


id: PBO:0081334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF133 antisense RNA 1","termid":"PBO:0081334"}


id: PBO:0061835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 3","termid":"PBO:0061835"}


id: PBO:0050182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA synthase 2","termid":"PBO:0050182"}


id: PBO:0028854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_glucose_starvation","termid":"PBO:0028854"}


id: PBO:0082581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chorismate mutase; catalyzes the conversion of chorismate to prephenate to initiate the tyrosine/phenylalanine-specific branch of aromatic amino acid biosynthesis","termid":"PBO:0082581"}


id: GO:0006520
data:
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id: GO:1904177
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adipose tissue development.","definition_xrefs":["PMID:23081848","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"adipose tissue development","termid":"GO:0060612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adipose tissue development","secondary_identifiers":["Reactome:R-HSA-9843745"],"synonyms":[{"name":"regulation of adipogenesis","type":"related"}],"termid":"GO:1904177"}


id: GO:0032474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an otolith are generated and organized.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"otolith development","termid":"GO:0048840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otolith morphogenesis","termid":"GO:0032474"}


id: MONDO:0001838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of gonococcal prostatitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"gonococcal prostatitis","termid":"MONDO:0021161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute gonococcal prostatitis","secondary_identifiers":["UMLS:C0153192","ICD9:098.12","icd11.foundation:1552826290","DOID:13943","MEDGEN:509194","SCTID:111806005"],"synonyms":[{"name":"acute gonococcal prostatitis","type":"exact"},{"name":"gonococcal prostatitis","type":"broad"},{"name":"gonococcal prostatitis (acute)","type":"exact"},{"name":"gonococcal prostatitis, acute","type":"exact"}],"termid":"MONDO:0001838","xrefs":{"Monarch":{"xref_id":"0001838"}}}


id: PBO:0085798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains a J-domain, which is a region with homology to the E. coli DnaJ protein","termid":"PBO:0085798"}


id: PBO:0030390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cytoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030390"}


id: PBO:0109229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF4 pseudogene 1","termid":"PBO:0109229"}


id: PBO:0090818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps60","termid":"PBO:0090818"}


id: PBO:0047619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIG4 phosphoinositide 5-phosphatase","termid":"PBO:0047619"}


id: PBO:0085727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the nonsense-mediated mRNA decay (NMD) pathway; interacts with Nam7p and Upf3p; involved in telomere maintenance","termid":"PBO:0085727"}


id: PBO:0012048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific PIL domain protein Meu14","termid":"PBO:0012048"}


id: PBO:0075337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin related VPS10 domain containing receptor 2","termid":"PBO:0075337"}


id: GO:0007392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Events that occur at the start of dorsal closure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"dorsal closure","termid":"GO:0007391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of dorsal closure","termid":"GO:0007392"}


id: PBO:0054075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1425","termid":"PBO:0054075"}


id: PBO:0076664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thromboxane A synthase 1","termid":"PBO:0076664"}


id: MONDO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Involuntary movements of the eye that are divided into two types, jerk and pendular. Jerk nystagmus has a slow phase in one direction followed by a corrective fast phase in the opposite direction, and is usually caused by central or peripheral vestibular dysfunction. Pendular nystagmus features oscillations that are of equal velocity in both directions and this condition is often associated with visual loss early in life. (Adams et al., Principles of Neurology, 6th ed, p272)","definition_xrefs":["MESH:D009759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pathologic nystagmus","termid":"MONDO:0004843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spontaneous ocular nystagmus","secondary_identifiers":["ICD9:379.53","SCTID:45339001","UMLS:C0271384","DOID:11771","ICD10CM:H55.03","MEDGEN:75748"],"synonyms":[{"name":"ocular nystagmus","type":"exact"},{"name":"searching eye movements","type":"exact"},{"name":"visual deprivation nystagmus","type":"exact"}],"termid":"MONDO:0001361","xrefs":{"Monarch":{"xref_id":"0001361"}}}


id: PBO:0039139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apical junction component 1 homolog","termid":"PBO:0039139"}


id: MONDO:1011141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in ass.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, ass","secondary_identifiers":["OMIA:001764-9793"],"termid":"MONDO:1011141","xrefs":{"Monarch":{"xref_id":"1011141"}}}


id: PBO:0058007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3934","termid":"PBO:0058007"}


id: GO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a collectin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"collectin receptor activity","termid":"GO:0001863"}


id: GO:0052660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-propane-1,2-diol + NAD+ = (R)-lactaldehyde + NADH + H+.","definition_xrefs":["RHEA:23872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactaldehyde reductase activity","termid":"GO:0008912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"R-lactaldehyde reductase activity","secondary_identifiers":["KEGG_REACTION:R03080","MetaCyc:RXN-8641"],"synonyms":[{"name":"(R)-propane-1,2-diol:NAD+ oxidoreductase activity","type":"related"},{"name":"D-lactaldehyde:propanediol oxidoreductase activity","type":"related"}],"termid":"GO:0052660"}


id: PBO:0028924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription","termid":"PBO:0028924"}


id: FYPO:0007446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which autophagic degradation of the endoplasmic reticulum occurs to a lower extent than normal during a cellular response to endoplasmic reticulum stress.","definition_xrefs":["PMID:32735772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased reticulophagy during vegetative growth","termid":"FYPO:0008197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased reticulophagy during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"decreased ER autophagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"decreased ER degradation","type":"related"},{"name":"decreased ER-phagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"decreased endoplasmic reticulum autophagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"decreased reticulophagy during cellular response to ER stress","type":"exact"},{"name":"decreased reticulophagy during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"decreased reticulophagy during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"reduced reticulophagy during cellular response to endoplasmic reticulum stress","type":"exact"}],"termid":"FYPO:0007446"}


id: GO:1903112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["PMID:24339919","GOC:bhm","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"},{"relation_name":"is_a","term_name":"positive regulation of single strand break repair","termid":"GO:1903518"},{"relation_name":"positively_regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of single-strand break repair via homologous recombination","synonyms":[{"name":"activation of single-strand break repair via homologous recombination","type":"narrow"},{"name":"up regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"up-regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"upregulation of single-strand break repair via homologous recombination","type":"exact"}],"termid":"GO:1903112"}


id: PBO:0068354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 135","termid":"PBO:0068354"}


id: MONDO:0020581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor with perivascular epithelioid cell differentiation characterized by the absence of pleomorphism and scarcity or absence of mitotic figures.","definition_xrefs":["NCIT:C121791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"},{"relation_name":"is_a","term_name":"benign soft tissue neoplasm","termid":"MONDO:0044335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign PEComa","secondary_identifiers":["MEDGEN:825530","UMLS:C3839685"],"synonyms":[{"name":"benign PEComa","type":"exact"},{"name":"benign PEComa, nos","type":"exact"},{"name":"benign PEComa, not otherwise specified","type":"exact"},{"name":"benign neoplasm with perivascular epithelioid cell differentiation","type":"exact"},{"name":"neoplasm with perivascular epithelioid cell differentiation, benign","type":"exact"},{"name":"typical PEComa","type":"exact"}],"termid":"MONDO:0020581","xrefs":{"Monarch":{"xref_id":"0020581"}}}


id: PBO:0017616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med6","termid":"PBO:0017616"}


id: GO:1905416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GO_REF:0000058","GOC:cilia","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell motility","termid":"GO:2000145"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amoeboid sperm motility","synonyms":[{"name":"regulation of ameboid sperm motility","type":"exact"},{"name":"regulation of ameboid sperm movement","type":"exact"},{"name":"regulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905416"}


id: GO:0140147
data:
  {"annotated_genes":["SJAG_01990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113782],"is_not":false,"summary":null,"term":"GO:0140147"}]},"cv_name":"biological_process","definition":"The directed movement of zinc ions from inside the vacuole across the vacuolar membrane and into the cytosol.","definition_xrefs":["GOC:vw","PMC:PMC203372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"zinc ion export from vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140147","terms_by_termid":{"GO:0140147":null}}


id: GO:0090087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of peptide transport","termid":"GO:0090087"}


id: PBO:0086066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that interacts with Sec72p and Hrr25p","termid":"PBO:0086066"}


id: GO:2000039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trichome morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of leaf development","termid":"GO:2000024"},{"relation_name":"regulates","term_name":"trichome morphogenesis","termid":"GO:0010090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trichome morphogenesis","synonyms":[{"name":"regulation of trichome cell morphogenesis during differentiation","type":"exact"}],"termid":"GO:2000039"}


id: PBO:0089106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tryptophan-tRNA ligase Wrs1","termid":"PBO:0089106"}


id: PBO:0002901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyphosphate synthetase (predicted)","termid":"PBO:0002901"}


id: MONDO:0975759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired elastotic haemangioma","secondary_identifiers":["Orphanet:675597"],"termid":"MONDO:0975759","xrefs":{"Monarch":{"xref_id":"0975759"}}}


id: PBO:0041226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 35","termid":"PBO:0041226"}


id: GO:1902760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of Mo(VI)-molybdopterin cytosine dinucleotide.","definition_xrefs":["GOC:TermGenie","PMID:23201473","GO_REF:0000068","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor biosynthetic process","termid":"GO:0006777"},{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"Mo(VI)-molybdopterin cytosine dinucleotide metabolic process","termid":"GO:1902759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"Mo(VI)-molybdopterin cytosine dinucleotide biosynthetic process","secondary_identifiers":["GO:0061601","MetaCyc:PWY-6476"],"synonyms":[{"name":"Mo(VI)-molybdopterin cytosine dinucleotide anabolism","type":"exact"},{"name":"Mo(VI)-molybdopterin cytosine dinucleotide biosynthesis","type":"exact"},{"name":"Mo(VI)-molybdopterin cytosine dinucleotide formation","type":"exact"},{"name":"Mo(VI)-molybdopterin cytosine dinucleotide synthesis","type":"exact"},{"name":"Mo-molybdopterin-cytosine-dinucleotide cofactor biosynthetic process","type":"exact"}],"termid":"GO:1902760"}


id: PBO:0072231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 6","termid":"PBO:0072231"}


id: GO:0009112
data:
  {"annotated_genes":["SJAG_01814","SJAG_06634","SJAG_03708","SJAG_01070","SJAG_05287","SJAG_00694","SJAG_03140","SJAG_02364","SJAG_03164","SJAG_01661","SJAG_00197","SJAG_00964","SJAG_01859","SJAG_00444","SJAG_04300","SJAG_04709","SJAG_04297","SJAG_05024","SJAG_00779","SJAG_00392","SJAG_04299","SJAG_02593","SJAG_01081","SJAG_04354","SJAG_01997","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92918,87300,110526,111361,115020,116161,98001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[116797,109706,109817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[97305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046083"},{"annotations":[93038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[114473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[93256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046100"},{"annotations":[113950,97306,109707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[113510,91284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006145"},{"annotations":[116284,115814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006144"},{"annotations":[88965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019856"},{"annotations":[86982,88708,93863,114357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006206"},{"annotations":[91478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"},{"annotations":[116801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleobase, a nitrogenous base that is a constituent of a nucleic acid, e.g. the purines: adenine, guanine, hypoxanthine, xanthine and the pyrimidines: cytosine, uracil, thymine.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01661":null,"SJAG_01673":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_01997":null,"SJAG_02364":null,"SJAG_02593":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_04300":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_05024":null,"SJAG_05287":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleobase metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase metabolism","type":"exact"}],"termid":"GO:0009112","terms_by_termid":{"GO:0006144":null,"GO:0006145":null,"GO:0006147":null,"GO:0006168":null,"GO:0006206":null,"GO:0006207":null,"GO:0006223":null,"GO:0009113":null,"GO:0009115":null,"GO:0019856":null,"GO:0046083":null,"GO:0046084":null,"GO:0046100":null}}


id: PBO:0085849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the ER; YBR287W is not an essential gene","termid":"PBO:0085849"}


id: GO:0032825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell activation","termid":"GO:0032816"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte differentiation","termid":"GO:0045621"},{"relation_name":"positively_regulates","term_name":"natural killer cell differentiation","termid":"GO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell differentiation","synonyms":[{"name":"activation of natural killer cell differentiation","type":"narrow"},{"name":"positive regulation of NK cell differentiation","type":"exact"},{"name":"positive regulation of natural killer cell development","type":"related"},{"name":"stimulation of natural killer cell differentiation","type":"narrow"},{"name":"up regulation of natural killer cell differentiation","type":"exact"},{"name":"up-regulation of natural killer cell differentiation","type":"exact"},{"name":"upregulation of natural killer cell differentiation","type":"exact"}],"termid":"GO:0032825"}


id: GO:0102100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arsenate + mycothiol = mycothiol-arsenate conjugate + H2O.","definition_xrefs":["EC:2.8.4.2","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylthioltransferase activity","termid":"GO:0050497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"mycothiol-arsenate ligase activity","secondary_identifiers":["MetaCyc:RXN-11187","RHEA:27349"],"termid":"GO:0102100"}


id: PBO:0040436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A2 pseudogene 1","termid":"PBO:0040436"}


id: PBO:0034576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_transport_during_meiosis","termid":"PBO:0034576"}


id: GO:0106411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'XMP + H20 = phosphate + xanthosine.","definition_xrefs":["RHEA:28530","PMID:34824243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-nucleotidase activity","termid":"GO:0008253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"XMP 5'-nucleosidase activity","secondary_identifiers":["MetaCyc:XMPXAN-RXN"],"termid":"GO:0106411"}


id: PBO:0059951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 37","termid":"PBO:0059951"}


id: PBO:0049919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes related family bHLH transcription factor with YRPW motif like","termid":"PBO:0049919"}


id: PBO:0054202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1582","termid":"PBO:0054202"}


id: PBO:0083209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF RPC19/YNL113W, an RNA polymerase subunit","termid":"PBO:0083209"}


id: FYPO:0006650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an ATP-dependent protein-DNA complex displacement activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal ATP-dependent protein-DNA complex displacement activity","termid":"FYPO:0006650"}


id: MONDO:1011620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumour that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wilms tumor, non-human animal","termid":"MONDO:1011439"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilms tumor, dog","secondary_identifiers":["OMIA:001142-9615"],"termid":"MONDO:1011620","xrefs":{"Monarch":{"xref_id":"1011620"}}}


id: GO:1990653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a monounsaturated fatty acid. A monounsaturated fatty acid has one double bond in the fatty acid chain with all of the remainder carbon atoms being single-bonded, as opposed to polyunsaturated fatty acids.","definition_xrefs":["PMID:16443825","GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete monounsaturated fatty acid biosynthetic process (obsolete GO:1990653)","termid":"GO:1990653"}


id: PBO:0052877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 8-2, pseudogene","termid":"PBO:0052877"}


id: GO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Association of oocytes with supporting epithelial granulosa cells to form primordial follicles.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian follicle endowment","termid":"GO:0001551"}


id: FYPO:0005656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which iron ion binding by a gene product does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished iron ion binding","synonyms":[{"name":"abolished iron binding","type":"exact"},{"name":"iron ion binding abolished","type":"exact"}],"termid":"FYPO:0005656"}


id: PBO:0065359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1","termid":"PBO:0065359"}


id: MONDO:0017524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly of a biphalangeal thumb","termid":"MONDO:0008269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of a biphalangeal thumb, bilateral","secondary_identifiers":["Orphanet:295146"],"synonyms":[{"name":"preaxial polydactyly type 1, bilateral","type":"exact"}],"termid":"MONDO:0017524","xrefs":{"Monarch":{"xref_id":"0017524"}}}


id: PBO:0027319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0027319"}


id: GO:1905378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a D-galactose stimulus.","definition_xrefs":["PMID:26261574","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"},{"relation_name":"is_a","term_name":"response to D-galactose","termid":"GO:1905377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to D-galactose","synonyms":[{"name":"cellular response to D-Gal","type":"exact"},{"name":"cellular response to D-galacto-hexose","type":"exact"}],"termid":"GO:1905378"}


id: PBO:0086054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cell periphery, SWAT-GFP fusion also localizes to the extracellular region, and mCherry fusion also localizes to the vacuole; deletion mutants are viable and have elevated levels of Ty1 retrotransposition and Ty1 cDNA","termid":"PBO:0086054"}


id: PR:G2TRS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1685.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.17","synonyms":[{"name":"Spom972h-SPBC1685.17","type":"exact"}],"termid":"PR:G2TRS0"}


id: PBO:0084356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lectin-like protein involved in flocculation; cell wall protein that binds mannose chains on the surface of other cells, confers floc-forming ability that is chymotrypsin sensitive and heat resistant; important for co-flocculation with other yeasts, mediating interaction with specific species; FLO1 has a paralog, FLO5, that arose from a segmental duplication","termid":"PBO:0084356"}


id: PBO:0040617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 antagonist/killer 1 pseudogene 2","termid":"PBO:0040617"}


id: GO:0097206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which hemolymph is filtered based on size and charge through a nephrocyte filtration barrier formed by the basement membrane and nephrocyte diaphragm.","definition_xrefs":["GOC:sart","PMID:18971929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal filtration","termid":"GO:0097205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrocyte filtration","termid":"GO:0097206"}


id: FYPO:0000707
data:
  {"alleles_by_uniquename":{"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific molecular function is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":1,"genotypes_by_uniquename":{"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal molecular function","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02796"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0000707","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0007363":null,"FYPO_EXT:0000002":null}}


id: PBO:0005909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonate/alpha-ketoglutare dioxygenase (predicted)","termid":"PBO:0005909"}


id: PBO:0066562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 1","termid":"PBO:0066562"}


id: PBO:0048175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase catalytic subunit 2","termid":"PBO:0048175"}


id: MONDO:0007581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exchondrosis of pinna, posterior","secondary_identifiers":["MESH:C565036","OMIM:133500","UMLS:C1851463","MEDGEN:377032"],"synonyms":[{"name":"Ear bump","type":"related"},{"name":"exchondrosis of pinna, posterior","type":"exact"}],"termid":"MONDO:0007581","xrefs":{"Monarch":{"xref_id":"0007581"}}}


id: GO:1904386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-phenylalanine derivative stimulus.","definition_xrefs":["PMID:12112407","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-phenylalanine derivative","termid":"GO:1904386"}


id: FYPO:0003884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NAD(P)H oxidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal NAD(P)H oxidase activity","termid":"FYPO:0003884"}


id: GO:0042021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a granulocyte macrophage colony-stimulating factor complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor complex binding","synonyms":[{"name":"GM-CSF complex binding","type":"exact"},{"name":"GMC-SF complex binding","type":"exact"},{"name":"granulocyte macrophage colony stimulating factor complex binding","type":"exact"}],"termid":"GO:0042021"}


id: PBO:0070930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 38","termid":"PBO:0070930"}


id: MONDO:0005406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carbohydrate intolerance first diagnosed during pregnancy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0005015"],"is_obsolete":false,"name":"gestational diabetes","secondary_identifiers":["MESH:D016640","NCIT:C34942","SCTID:11687002","DOID:11714","UMLS:C0085207","EFO:0004593","MEDGEN:38815"],"synonyms":[{"name":"GDM","type":"exact"},{"name":"diabetes in pregnancy","type":"exact"},{"name":"gestational diabetes mellitus","type":"exact"},{"name":"maternal gestational diabetes mellitus","type":"exact"}],"termid":"MONDO:0005406","xrefs":{"Monarch":{"xref_id":"0005406"}}}


id: FYPO:0007985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which equatorial microtubule organizing center (eMTOC) assembly occurs earlier than normal. eMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an equatorial microtubule organizing center.","definition_xrefs":["PMID:15068790","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eMTOC assembly","termid":"FYPO:0005690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"early eMTOC assembly","termid":"FYPO:0007985"}


id: PBO:0089286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase Hem15","termid":"PBO:0089286"}


id: PBO:0064691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 27","termid":"PBO:0064691"}


id: MONDO:0045036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A characteristic of an infectious disease in which the disease affects an immunologically normal host.","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease characteristic","termid":"MONDO:0045034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary infectious","termid":"MONDO:0045036","xrefs":{"Monarch":{"xref_id":"0045036"}}}


id: GO:0005795
data:
  {"annotated_genes":["SJAG_00567","SJAG_04770","SJAG_04112","SJAG_03347","SJAG_01633","SJAG_04739","SJAG_01276","SJAG_03555","SJAG_03634","SJAG_03278","SJAG_04548","SJAG_01516","SJAG_01025","SJAG_00816","SJAG_00330","SJAG_04095","SJAG_02902"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90675,95053,95915,110297],"is_not":false,"summary":null,"term":"GO:0005795"},{"annotations":[116407,95553],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000137"},{"annotations":[98214],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031985"},{"annotations":[112507,89841,97593,100649],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005797"},{"annotations":[100650,112508,89842,95554,99006],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000138"},{"annotations":[112141],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[104418,87020,117483,97384],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00330":null,"SJAG_00567":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01516":null,"SJAG_01633":null,"SJAG_02902":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04548":null,"SJAG_04739":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"Golgi stack","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016940"],"synonyms":[{"name":"Golgi cisternae","type":"exact"},{"name":"dictyosome","type":"narrow"}],"termid":"GO:0005795","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005795":null,"GO:0005797":null,"GO:0031985":null,"GO:0140497":null}}


id: PBO:0012059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain","termid":"PBO:0012059"}


id: GO:0015520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out).","definition_xrefs":["TC:2.A.1.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetracycline transmembrane transporter activity","termid":"GO:0008493"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"tetracycline:proton antiporter activity","synonyms":[{"name":"tetracyclin:hydrogen antiporter activity","type":"exact"},{"name":"tetracyclin:proton antiporter activity","type":"exact"},{"name":"tetracycline:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015520"}


id: MONDO:1011138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in alpaca.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, alpaca","secondary_identifiers":["OMIA:001764-30538"],"termid":"MONDO:1011138","xrefs":{"Monarch":{"xref_id":"1011138"}}}


id: MONDO:0003015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant biphasic mesothelioma (obsolete MONDO:0003015)","termid":"MONDO:0003015","xrefs":{"Monarch":{"xref_id":"0003015"}}}


id: MONDO:0006556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skin conditions characterized by dense infiltration of inflammatory cells (neutrophils) in the affected tissue. They arise in reaction to some underlying systemic illness. A neutrophilic dermatosis may be seen in isolation or more than one type may occur in the same individual.","definition_xrefs":["EFO:1000706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hand dermatosis","secondary_identifiers":["MESH:D006229","MEDGEN:6718","UMLS:C0018567","DOID:3158"],"termid":"MONDO:0006556","xrefs":{"Monarch":{"xref_id":"0006556"}}}


id: GO:0048601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of an oocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of an oocyte.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte morphogenesis","synonyms":[{"name":"oocyte morphogenesis during differentiation","type":"exact"}],"termid":"GO:0048601"}


id: GO:0046466
data:
  {"annotated_genes":["SJAG_01219","SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108277,89343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of membrane lipids, any lipid found in or associated with a biological membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane lipid metabolic process","termid":"GO:0006643"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"membrane lipid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane lipid breakdown","type":"exact"},{"name":"membrane lipid catabolism","type":"exact"},{"name":"membrane lipid degradation","type":"exact"},{"name":"membrane lipid peroxidation","type":"broad"}],"termid":"GO:0046466","terms_by_termid":{"GO:0046521":null}}


id: PBO:0090919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N7-)-methyltransferase WD repeat subunit Trm82","termid":"PBO:0090919"}


id: PR:Q9P6M7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug99 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6M7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 99 protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.04","synonyms":[{"name":"Spom972h-mug99","type":"exact"}],"termid":"PR:Q9P6M7"}


id: PBO:0063922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 1","termid":"PBO:0063922"}


id: FYECO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Chemical was endogenously produced in the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000060 chemical produced (obsolete FYECO:0000060)","termid":"FYECO:0000060"}


id: GO:0000462
data:
  {"annotated_genes":["SJAG_04033","SJAG_04524","SJAG_02547","SJAG_04174","SJAG_06613","SJAG_01623","SJAG_02702","SJAG_02250","SJAG_04908","SJAG_01604","SJAG_01347","SJAG_00562","SJAG_03341","SJAG_04339","SJAG_03234","SJAG_03846","SJAG_02553","SJAG_04582","SJAG_01551","SJAG_02644","SJAG_00572","SJAG_03569","SJAG_00344","SJAG_02358","SJAG_00945","SJAG_03952","SJAG_02821","SJAG_02499","SJAG_00955","SJAG_00879","SJAG_04916","SJAG_01609","SJAG_03077","SJAG_00897","SJAG_05018","SJAG_05187","SJAG_00294","SJAG_04029","SJAG_01907","SJAG_04224","SJAG_03422","SJAG_00965","SJAG_02020","SJAG_00772","SJAG_03796","SJAG_03425","SJAG_04069","SJAG_04979"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87337,87833,88750,90740,92143,93834,95178,95179,96539,97841,97842,98660,98661,98698,99701,100250,100898,101062,105151,105152,105448,105686,106433,106573,108163,108554,109182,109843,111227,114167,115194,116189],"is_not":false,"summary":null,"term":"GO:0000462"},{"annotations":[114639,99313,107084],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000480"},{"annotations":[95999,104249,114751,98991,94214,105127,114839,96290,105031,92916,102609,99314,107414,107085,112930,108462,118027,104033,105128],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[105032],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000461"},{"annotations":[107086,114640,108463,99315],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00294":null,"SJAG_00344":null,"SJAG_00562":null,"SJAG_00572":null,"SJAG_00772":null,"SJAG_00879":null,"SJAG_00897":null,"SJAG_00945":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01347":null,"SJAG_01551":null,"SJAG_01604":null,"SJAG_01609":null,"SJAG_01623":null,"SJAG_01907":null,"SJAG_02020":null,"SJAG_02250":null,"SJAG_02358":null,"SJAG_02499":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_02702":null,"SJAG_02821":null,"SJAG_03077":null,"SJAG_03234":null,"SJAG_03341":null,"SJAG_03422":null,"SJAG_03425":null,"SJAG_03569":null,"SJAG_03796":null,"SJAG_03846":null,"SJAG_03952":null,"SJAG_04029":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04908":null,"SJAG_04916":null,"SJAG_04979":null,"SJAG_05018":null,"SJAG_05187":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990041"],"synonyms":[{"name":"maturation of 18S rRNA","type":"narrow"}],"termid":"GO:0000462","terms_by_termid":{"GO:0000447":null,"GO:0000461":null,"GO:0000462":null,"GO:0000472":null,"GO:0000480":null}}


id: PBO:0077998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 2","termid":"PBO:0077998"}


id: PBO:0071808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 3","termid":"PBO:0071808"}


id: PBO:0046872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3 metabolism regulating signaling molecule C","termid":"PBO:0046872"}


id: FYPO:0003388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of biotin into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biotin import","termid":"FYPO:0001744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased biotin import","synonyms":[{"name":"decreased biotin import across plasma membrane","type":"exact"},{"name":"decreased biotin import during mitotic cell cycle","type":"related"},{"name":"decreased biotin import during vegetative growth","type":"exact"},{"name":"decreased biotin import into cell","type":"exact"},{"name":"decreased biotin uptake","type":"exact"},{"name":"reduced biotin import","type":"exact"}],"termid":"FYPO:0003388"}


id: GO:0061759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + reduced acceptor -> (S)-2-hydroxyglutarate + acceptor.","definition_xrefs":["RHEA:21254","GOC:dph","PMID:26774271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyglutarate dehydrogenase activity","termid":"GO:0047545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alpha-ketoglutarate reductase activity","synonyms":[{"name":"2-hydroxyglutarate dehydrogenase activity, reverse reaction","type":"exact"},{"name":"2-ketoglutarate reductase activity","type":"related"},{"name":"2-oxoglutarate reductase activity","type":"related"},{"name":"D-2HG reductase activity","type":"related"}],"termid":"GO:0061759"}


id: PBO:0061562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase domain containing 4","termid":"PBO:0061562"}


id: PBO:0078958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-1","termid":"PBO:0078958"}


id: MONDO:1011864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymicrogyria and asymmetrical ventricular dilation, non-human animal","secondary_identifiers":["OMIA:001098"],"termid":"MONDO:1011864","xrefs":{"Monarch":{"xref_id":"1011864"}}}


id: PBO:0039230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT3 intronic transcript 1","termid":"PBO:0039230"}


id: PBO:0068905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 147, pseudogene","termid":"PBO:0068905"}


id: GO:0046924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to an L-phenylalanine residue to form 2-(S-L-cysteinyl)-L-phenylalanine.","definition_xrefs":["RESID:AA0340","PMID:12696888"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-(S-L-cysteinyl)-L-phenylalanine (obsolete GO:0046924)","termid":"GO:0046924"}


id: PBO:0013480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-methylase subunit Trm72 (predicted)","termid":"PBO:0013480"}


id: PBO:0077088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 3","termid":"PBO:0077088"}


id: MONDO:0011916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive Charcot-Marie-Tooth disease with hoarseness (ARCMT2K or CMT4C4) is a severe early-onset form of axonal CMT peripheral sensorimotor polyneuropathy.","definition_xrefs":["Orphanet:101097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2K","secondary_identifiers":["UMLS:C1842983","DOID:0110167","MEDGEN:375064","OMIM:607831","GARD:12448","SCTID:725047007"],"synonyms":[{"name":"ARCMT2K","type":"exact"},{"name":"CMT2K","type":"related"},{"name":"Charcot-Marie-Tooth disease, autosomal dominant, type 2K","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2K","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2K","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2K","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy axonal type 2K","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, axonal, type 2K","type":"related"},{"name":"autosomal recessive Charcot-Marie-Tooth disease with hoarseness","type":"exact"},{"name":"autosomal recessive axonal CMT4C4","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease disease type 2K","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2K","type":"exact"}],"termid":"MONDO:0011916","xrefs":{"Monarch":{"xref_id":"0011916"}}}


id: MONDO:0013262
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85701,85702],"is_not":false,"summary":null,"term":"MONDO:0013262"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the MYH7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1S","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613426","UMLS:C1834481","DOID:0110454","MEDGEN:371831","GARD:12832","MESH:C563538"],"synonyms":[{"name":"CMD1S","type":"exact"},{"name":"MYH7 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1S","type":"related"},{"name":"cardiomyopathy, dilated, type 1S","type":"exact"},{"name":"dilated cardiomyopathy type 1S","type":"exact"},{"name":"dilated cardiomyopathy-1S","type":"related"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in MYH7","type":"exact"},{"name":"left ventricular noncompaction 5","type":"related"}],"termid":"MONDO:0013262","terms_by_termid":{"MONDO:0013262":null},"xrefs":{"Monarch":{"xref_id":"0013262"}}}


id: _global:has_output_o_axis_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the has_output relation with the axis_of relation","definition_xrefs":["GOC:dph","GOC:mtg_berkeley_2012_08_27","GOC:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output_o_axis_of","secondary_identifiers":["GOREL:0001002"],"termid":"_global:has_output_o_axis_of"}


id: GO:0052728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-violaxanthin = all-trans-capsorubin.","definition_xrefs":["RHEA:21752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"capsorubin synthase activity","secondary_identifiers":["MetaCyc:RXN-7946"],"synonyms":[{"name":"CCS","type":"broad"},{"name":"capsanthin-capsorubin synthase activity","type":"broad"},{"name":"ketoxanthophyll synthase activity","type":"broad"},{"name":"violaxanthin-capsorubin isomerase (ketone-forming) activity","type":"exact"}],"termid":"GO:0052728"}


id: PBO:0066801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 100","termid":"PBO:0066801"}


id: PBO:0111949
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain","termid":"PBO:0111949"}


id: GO:0035818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the amount of urine excreted over a unit of time, as a result of pressure natriuresis.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pressure natriuresis","termid":"GO:0003095"},{"relation_name":"is_a","term_name":"positive regulation of urine volume","termid":"GO:0035810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urine volume by pressure natriuresis","synonyms":[{"name":"diuresis resulting from pressure natriuresis","type":"related"}],"termid":"GO:0035818"}


id: GO:0039576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host JAK1 (Janus Kinase 1).","definition_xrefs":["PMID:16188985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of JAK1 activity","secondary_identifiers":["GO:0039515","VZ:784"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of JAK1 activity","type":"narrow"},{"name":"inhibition of host JAK activity by virus","type":"narrow"},{"name":"negative regulation by virus of host JAK","type":"narrow"},{"name":"negative regulation by virus of tyrosine phosphorylation of host STAT protein","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of JAK1 activity","type":"narrow"},{"name":"suppression by virus of host JAK1 activity","type":"narrow"},{"name":"suppression by virus of tyrosine phosphorylation of host STAT protein","type":"narrow"},{"name":"viral inhibition of tyrosine phosphorylation of host STAT protein","type":"narrow"}],"termid":"GO:0039576"}


id: GO:0050139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinate + UDP-D-glucose = N-(beta-D-glucosyl)nicotinate + UDP.","definition_xrefs":["EC:2.4.1.196","RHEA:19437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nicotinate-N-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01722","MetaCyc:NICOTINATE-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose:nicotinate N-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:nicotinic acid-N-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:nicotinate N-glucosyltransferase activity","type":"related"},{"name":"nicotinate glucosyltransferase activity","type":"broad"},{"name":"uridine diphosphoglucose-nicotinate N-glucosyltransferase activity","type":"related"}],"termid":"GO:0050139"}


id: GO:0006661
data:
  {"annotated_genes":["SJAG_04975","SJAG_02321","SJAG_04924","SJAG_04930","SJAG_03672","SJAG_03131","SJAG_05278","SJAG_02804","SJAG_03170","SJAG_03115","SJAG_01148","SJAG_00846","SJAG_01570","SJAG_00114","SJAG_02913","SJAG_06425","SJAG_01571","SJAG_04545","SJAG_06383","SJAG_04165","SJAG_02289","SJAG_00053","SJAG_00068","SJAG_04337","SJAG_01236","SJAG_00063","SJAG_04119","SJAG_04537","SJAG_03878","SJAG_01227","SJAG_03506","SJAG_00295","SJAG_01860","SJAG_00831","SJAG_05330","SJAG_00999","SJAG_02488","SJAG_05327","SJAG_00296","SJAG_02613","SJAG_03292","SJAG_01863","SJAG_04881","SJAG_02776","SJAG_03801","SJAG_02523","SJAG_01416","SJAG_01876","SJAG_03066"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91657,92137,106758,116449,118256],"is_not":false,"summary":null,"term":"GO:0006661"},{"annotations":[91350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[92501,107013,115579,116678,98371,89064,91736,102526,103197,86956,90907,99719,101096,113382,114231,94018,99785,93034,88440,97603,108044,111050,98164,88168,90734,109387,92590,114655,103259,111802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[103860,89923],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[117900,91352,92725,110709,90728,96199,110582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[110618,61275,62810,97094,61384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[116973],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol, any glycophospholipid in which the sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00063":null,"SJAG_00068":null,"SJAG_00114":null,"SJAG_00295":null,"SJAG_00296":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00999":null,"SJAG_01148":null,"SJAG_01227":null,"SJAG_01236":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01571":null,"SJAG_01860":null,"SJAG_01863":null,"SJAG_01876":null,"SJAG_02289":null,"SJAG_02321":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02613":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03131":null,"SJAG_03170":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04537":null,"SJAG_04545":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04930":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_05330":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-1660499","GO:0046489","Reactome:R-HSA-1483226","Reactome:R-HSA-1483248","Reactome:R-HSA-1660517","Reactome:R-HSA-1660514","Reactome:R-HSA-1660516"],"synonyms":[{"name":"PtdIns biosynthesis","type":"exact"},{"name":"PtdIns biosynthetic process","type":"exact"},{"name":"phosphatidylinositol anabolism","type":"exact"},{"name":"phosphatidylinositol biosynthesis","type":"exact"},{"name":"phosphatidylinositol formation","type":"exact"},{"name":"phosphatidylinositol synthesis","type":"exact"},{"name":"phosphoinositide biosynthesis","type":"exact"},{"name":"phosphoinositide biosynthetic process","type":"exact"}],"termid":"GO:0006661","terms_by_termid":{"GO:0006506":null,"GO:0006661":null,"GO:0036092":null,"GO:0046854":null,"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: MONDO:0005145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sporadic amyotrophic lateral sclerosis is a amyotrophic lateral sclerosis in which there is no known cause, such as no family history.","definition_xrefs":["EFO:0001357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis","termid":"MONDO:0004976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"sporadic amyotrophic lateral sclerosis","secondary_identifiers":["MEDGEN:400171","DOID:0080917","UMLS:C1862941"],"termid":"MONDO:0005145","xrefs":{"Monarch":{"xref_id":"0005145"}}}


id: PBO:0004879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase complex subunit Eaf7","termid":"PBO:0004879"}


id: PBO:0080042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 28","termid":"PBO:0080042"}


id: PBO:0028812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity","termid":"PBO:0028812"}


id: PBO:0055430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2860","termid":"PBO:0055430"}


id: PBO:0089340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD synthetase Nad1","termid":"PBO:0089340"}


id: GO:0141029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts focal adhesion in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24573681","PMID:24905543","PMID:19489119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host focal adhesion","synonyms":[{"name":"disruption by symbiont of host focal adhesion","type":"exact"}],"termid":"GO:0141029"}


id: PBO:0004487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit Php5","termid":"PBO:0004487"}


id: MONDO:0005520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bone softening and weakening usually caused by deficiency or impaired metabolism of vitamin D. Deficiency of calcium, magnesium, or phosphorus may also cause rickets. It predominantly affects children who suffer from severe malnutrition. It manifests with bone pain, fractures, muscle weakness, and skeletal deformities.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone remodeling disease","termid":"MONDO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rickets","secondary_identifiers":["EFO:0005583","MEDGEN:48470","NCIT:C26878","GARD:5700","MESH:D012279","SCTID:68295002","HP:0002748","UMLS:C0035579","DOID:10609","SCTID:41345002","ICD9:268.0"],"synonyms":[{"name":"active rickets","type":"related"},{"name":"hypovitaminosis D","type":"related"},{"name":"nutritional rickets","type":"related"},{"name":"rachitis","type":"exact"},{"name":"rickets","type":"exact"},{"name":"rickets (disease)","type":"exact"},{"name":"vitamin D deficiency disease","type":"related"},{"name":"vitamin D hydroxylation-deficient rickets","type":"exact"},{"name":"vitamin-D deficiency rickets","type":"related"}],"termid":"MONDO:0005520","xrefs":{"Monarch":{"xref_id":"0005520"}}}


id: SO:0000948
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region specifically recognised by a recombinase, which inverts the region flanked by a pair of sites.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site_specific_recombination_target_region","termid":"SO:0000342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_site","synonyms":[{"name":"inversion site","type":"exact"}],"termid":"SO:0000948"}


id: PBO:0083632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain-containing protein involved in endocytosis; actin cytoskeletal organization and cell wall morphogenesis; forms a complex with Sla1p and Pan1p","termid":"PBO:0083632"}


id: FYPO:0007274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion inheritance is abnormal. Mitochondrion inheritance is a cellular process that results in the distribution of mitochondria into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitochondrion inheritance","synonyms":[{"name":"abnormal mitochondrial inheritance","type":"exact"}],"termid":"FYPO:0007274"}


id: PBO:0056768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 21A, HSPA lysine","termid":"PBO:0056768"}


id: MONDO:0014079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"restless legs syndrome, susceptibility to","termid":"MONDO:0100170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome, susceptibility to, 8","secondary_identifiers":["OMIM:615197","MEDGEN:767578","UMLS:C3554664"],"synonyms":[{"name":"RLS8","type":"exact"},{"name":"restless legs syndrome 8","type":"exact"},{"name":"restless legs syndrome, susceptibility to, 8","type":"exact"}],"termid":"MONDO:0014079","xrefs":{"Monarch":{"xref_id":"0014079"}}}


id: GO:1901905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tamsulosin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tamsulosin","termid":"GO:1901905"}


id: PBO:0072954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stearoyl-CoA desaturase","termid":"PBO:0072954"}


id: PBO:0062536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 1","termid":"PBO:0062536"}


id: GO:0030855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium.","definition_xrefs":["PMID:11839751","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation","termid":"GO:0030855"}


id: PBO:0079200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 4","termid":"PBO:0079200"}


id: MONDO:0017474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrodactyly of fingers","secondary_identifiers":["MESH:C537720","GARD:8529","MEDGEN:107892","icd11.foundation:1647254435","SCTID:297195000","UMLS:C0574044","HP:0100746","Orphanet:295044"],"synonyms":[{"name":"Megalodactyly of the hand","type":"related"},{"name":"macrodactyly of hand","type":"exact"},{"name":"macrodactyly of the hand","type":"related"},{"name":"megalodactylism of the hand","type":"related"}],"termid":"MONDO:0017474","xrefs":{"Monarch":{"xref_id":"0017474"}}}


id: PBO:0081904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 861, pseudogene","termid":"PBO:0081904"}


id: PBO:0075409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 6","termid":"PBO:0075409"}


id: PR:O13968
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carboxypeptidase PM20D1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized carboxypeptidase C24C9.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.08","secondary_identifiers":["UniProtKB:O13968"],"synonyms":[{"name":"Spom972h-PM20D1","type":"exact"}],"termid":"PR:O13968"}


id: PBO:0076631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBL1X/Y related 1","termid":"PBO:0076631"}


id: PBO:0073094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit C pseudogene 3","termid":"PBO:0073094"}


id: PBO:0082892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase (CDK) inhibitor; regulates Pho80p-Pho85p and Pcl7p-Pho85p cyclin-CDK complexes in response to phosphate levels; inhibitory activity for Pho80p-Pho85p requires myo-D-inositol heptakisphosphate (IP7) generated by Vip1p; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0082892"}


id: FYPO:0007999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle pole body is abolished during karyogamy.","definition_xrefs":["PMID:25869666","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to meiotic spindle pole body","termid":"FYPO:0003542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000054","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to spindle pole body during karyogamy","termid":"FYPO:0007999"}


id: GO:0048905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an anterior lateral line neuromast mantle cell. Mantle cells are non-sensory cells that surround the sensory strip, separating the neuromast from the epidermis. Mantle cells secrete the cupula in which the ciliary bundles of all of the hair cells are embedded.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast mantle cell differentiation","termid":"GO:0048888"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast mantle cell differentiation","termid":"GO:0048905"}


id: GO:0061689
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An specialized occluding junction where three epithelial cells meet. It is composed of a branching network of sealing strands that run perpendicularly to the bicellular tight junction at the point of contact between three epithelial cells in an epithelial sheet.","definition_xrefs":["PMID:22520461","PMID:25822906","GOC:dk","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction","termid":"GO:0070160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tricellular tight junction","termid":"GO:0061689"}


id: PR:G2TRR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.11","synonyms":[{"name":"Spom972h-SPBPB21E7.11","type":"exact"}],"termid":"PR:G2TRR9"}


id: PBO:0091607
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Important For Sex","termid":"PBO:0091607"}


id: PBO:0017498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zn(2)-C6 fungal-type DNA-binding transcription factor, truncated","termid":"PBO:0017498"}


id: GO:0022853
data:
  {"annotated_genes":["SJAG_00136","SJAG_04955","SJAG_03337","SJAG_02779","SJAG_04905","SJAG_01129","SJAG_00212","SJAG_07006","SJAG_03820","SJAG_05629","SJAG_00057","SJAG_01400","SJAG_02399","SJAG_03866","SJAG_01190","SJAG_01471","SJAG_MIT13","SJAG_MIT03","SJAG_01435","SJAG_07007","SJAG_00976","SJAG_01490","SJAG_05294","SJAG_04015","SJAG_03406","SJAG_04028","SJAG_04714","SJAG_01077","SJAG_01913","SJAG_04258","SJAG_04506","SJAG_04616","SJAG_01447","SJAG_MIT20","SJAG_01406","SJAG_03850","SJAG_03960","SJAG_04096","SJAG_02782","SJAG_01669","SJAG_04757","SJAG_03606","SJAG_04673","SJAG_04152","SJAG_00516","SJAG_03608","SJAG_02023","SJAG_04068","SJAG_04698","SJAG_03401","SJAG_01817","SJAG_01541","SJAG_01397","SJAG_02958","SJAG_00755","SJAG_01355","SJAG_02504","SJAG_MIT04","SJAG_02646","SJAG_03490","SJAG_03595","SJAG_02780","SJAG_00601","SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[111791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140679"},{"annotations":[100512,114532,94960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019829"},{"annotations":[90218,115008,97834,90712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[75834,110099,116649,102469,113613,72683,91999,113619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[113670,118514,91459,87714,114902,118486,107745,88737,114101,118513,118485,116263,118464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[116653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[100170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[101149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[95274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[90713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[97546,92081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[112302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[101124,108132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[107322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[107323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[111794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008556"},{"annotations":[111795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[113215,87219,87220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[111796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[105171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[88831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[102162,99509,103396,89360,87554,95158,109334,118165,89676,101130,91562,96120,98421,99439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"},{"annotations":[88832,96242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"},{"annotations":[91566,91572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[101152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[95275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[103562,117128,118490,107428,112844,117601,103975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"},{"annotations":[95041,87963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an ion from one side of a membrane to the other up the solute's concentration gradient. This is carried out by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transporter activity","termid":"GO:0015075"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01129":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01406":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01490":null,"SJAG_01541":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02399":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02782":null,"SJAG_02958":null,"SJAG_03337":null,"SJAG_03401":null,"SJAG_03406":null,"SJAG_03490":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_03960":null,"SJAG_04015":null,"SJAG_04028":null,"SJAG_04068":null,"SJAG_04096":null,"SJAG_04152":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04673":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04757":null,"SJAG_04905":null,"SJAG_04955":null,"SJAG_05294":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"active monoatomic ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"active ion transmembrane transporter activity","type":"broad"}],"termid":"GO:0022853","terms_by_termid":{"GO:0004129":null,"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0005388":null,"GO:0008121":null,"GO:0008137":null,"GO:0008506":null,"GO:0008553":null,"GO:0008554":null,"GO:0008556":null,"GO:0008900":null,"GO:0010486":null,"GO:0015295":null,"GO:0015366":null,"GO:0015369":null,"GO:0015379":null,"GO:0015385":null,"GO:0015386":null,"GO:0015410":null,"GO:0015505":null,"GO:0019829":null,"GO:0034216":null,"GO:0043682":null,"GO:0046961":null,"GO:0097434":null,"GO:0140581":null,"GO:0140679":null}}


id: PBO:0005304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 3, Pup3 (predicted)","termid":"PBO:0005304"}


id: PBO:0034398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulator_(obsolete_requires_regulator)","termid":"PBO:0034398"}


id: MONDO:0007664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any juvenile glaucoma in which the cause of the disease is a mutation in the MYOC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile open angle glaucoma","termid":"MONDO:0020367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 1, open angle, A","secondary_identifiers":["GARD:9485","OMIM:137750","UMLS:C1842028","MEDGEN:333974","MESH:C564234"],"synonyms":[{"name":"GLC1A","type":"related"},{"name":"JOAG1","type":"broad"},{"name":"JOAG1A","type":"exact"},{"name":"MYOC juvenile glaucoma","type":"exact"},{"name":"MYOC juvenile open angle glaucoma","type":"exact"},{"name":"glaucoma 1, open angle, 50","type":"related"},{"name":"glaucoma 1, open angle, A","type":"exact"},{"name":"glaucoma 1, open angle, type A","type":"exact"},{"name":"glaucoma 1A, primary open angle","type":"exact"},{"name":"glaucoma hereditary, juvenile","type":"related"},{"name":"glaucoma, primary open angle, juvenile-onset, 1","type":"related"},{"name":"juvenile glaucoma caused by mutation in MYOC","type":"exact"},{"name":"juvenile open angle glaucoma caused by mutation in MYOC","type":"exact"},{"name":"primary open angle glaucoma juvenile onset 1","type":"related"}],"termid":"MONDO:0007664","xrefs":{"Monarch":{"xref_id":"0007664"}}}


id: MONDO:0020048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Internal carotid artery (ICA) agenesis (uni or bilateral) is a developmental defect that may be asymptomatic or lead to cerebrovascular lesions. It is a rare malformation, with only around hundred cases reported in the literature. When symptoms are present, they are caused by cerebrovascular insufficiency, compression of the brain by vessels that dilate to compensate for the absence of the ICA, or the presence of an aneurysm. Associated intracranial aneurysms occur in 25 to 35% of patients and are often responsible for intracranial hemorrhage, which may present as the initial symptom. The absence of the ICA is the result of either agenesis or aplasia. The term agenesis is used when both the ICA and its bony canal are absent, whereas there is some evidence of carotid canals in cases of aplasia. The absence of the ICA can be detected by angiography or by computerized tomography.","definition_xrefs":["Orphanet:981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal carotid agenesis","secondary_identifiers":["icd11.foundation:368564890","MEDGEN:928576","GARD:3012","SCTID:722004001","UMLS:C4302907"],"synonyms":[{"name":"agenesis of the internal carotid artery","type":"related"},{"name":"internal carotid artery agenesis","type":"related"}],"termid":"MONDO:0020048","xrefs":{"Monarch":{"xref_id":"0020048"}}}


id: PBO:0028243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_glycosylated_protein_in_cell","termid":"PBO:0028243"}


id: GO:0008697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-dehydro-4-deoxy-D-glucuronate = 3-deoxy-D-glycero-2,5-hexodiulosonate.","definition_xrefs":["EC:5.3.1.17","RHEA:23896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity","secondary_identifiers":["KEGG_REACTION:R04383","MetaCyc:5.3.1.17-RXN"],"synonyms":[{"name":"4-deoxy-L-threo-5-hexosulose-uronate aldose-ketose-isomerase activity","type":"related"},{"name":"4-deoxy-L-threo-5-hexulose uronate isomerase activity","type":"related"},{"name":"5-keto-4-deoxyuronate isomerase activity","type":"related"}],"termid":"GO:0008697"}


id: PBO:0091598
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caffeine-Induced cell Death","termid":"PBO:0091598"}


id: PBO:0034040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_positively_regulates","termid":"PBO:0034040"}


id: GO:1905927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of invadopodium disassembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invadopodium disassembly (obsolete GO:1905927)","termid":"GO:1905927"}


id: PBO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.20","termid":"PBO:0001800"}


id: PBO:0076821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 4B","termid":"PBO:0076821"}


id: PBO:0090341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2A","termid":"PBO:0090341"}


id: MONDO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign skin neoplasm composed of epithelial cells.","definition_xrefs":["NCIT:C7419"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acanthoma","secondary_identifiers":["MESH:D049309","DOID:174","MEDGEN:208851","HP:0025432","UMLS:C0846967"],"synonyms":[{"name":"acanthoma","type":"exact"},{"name":"acanthoma (disease)","type":"exact"}],"termid":"MONDO:0002093","xrefs":{"Monarch":{"xref_id":"0002093"}}}


id: GO:1904880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen sulfide stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:24012591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydrogen sulfide","synonyms":[{"name":"response to dihydridosulfur","type":"exact"},{"name":"response to sulfane","type":"exact"}],"termid":"GO:1904880"}


id: PR:P78825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenosine kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.14","secondary_identifiers":["UniProtKB:P78825"],"synonyms":[{"name":"Spom972h-ADK","type":"exact"}],"termid":"PR:P78825"}


id: GO:0002805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antimicrobial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"regulates","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"}


id: FYPO:0001640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-leucine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular leucine level","synonyms":[{"name":"normal cellular L-leucine level","type":"exact"},{"name":"normal cellular leucine level during mitotic cell cycle","type":"related"},{"name":"normal cellular leucine level during vegetative growth","type":"exact"},{"name":"normal level of leucine in cell","type":"exact"}],"termid":"FYPO:0001640"}


id: GO:0050536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylphenylethylamine + H2O = acetate + phenylethylamine.","definition_xrefs":["RHEA:23952","EC:3.5.1.85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-N-acetyl-1-phenylethylamine hydrolase activity","secondary_identifiers":["KEGG_REACTION:R07301","MetaCyc:3.5.1.85-RXN"],"synonyms":[{"name":"(S)-N-acetyl-1-phenylethylamine amidohydrolase activity","type":"related"},{"name":"(S)-N-acetylphenylethylamine:H2O hydrolase activity","type":"related"}],"termid":"GO:0050536"}


id: PBO:0059168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPV17L2 pseudogene 1","termid":"PBO:0059168"}


id: GO:0032463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein homooligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein oligomerization","termid":"GO:0032460"},{"relation_name":"is_a","term_name":"regulation of protein homooligomerization","termid":"GO:0032462"},{"relation_name":"negatively_regulates","term_name":"protein homooligomerization","termid":"GO:0051260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of protein homooligomerization","synonyms":[{"name":"down regulation of protein homooligomerization","type":"exact"},{"name":"down-regulation of protein homooligomerization","type":"exact"},{"name":"downregulation of protein homooligomerization","type":"exact"},{"name":"inhibition of protein homooligomerization","type":"narrow"}],"termid":"GO:0032463"}


id: PBO:0036432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal and vacuolar ubiquitin-protein ligase E3/phosphatidylinositol(3)-phosphate binding protein (predicted)","termid":"PBO:0036432"}


id: PBO:0034687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_double-strand_break_site","termid":"PBO:0034687"}


id: PATO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An avidity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"avidity","termid":"PATO:0002073"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased avidity","termid":"PATO:0002075"}


id: GO:0042997
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87604],"is_not":false,"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Golgi to plasma membrane protein transport","termid":"GO:0042996"},{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to plasma membrane","termid":"GO:1903077"},{"relation_name":"negatively_regulates","term_name":"Golgi to plasma membrane protein transport","termid":"GO:0043001"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of Golgi to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"down-regulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"downregulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"inhibition of Golgi to plasma membrane protein transport","type":"narrow"}],"termid":"GO:0042997","terms_by_termid":{"GO:0042997":null}}


id: MONDO:1012135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin M deficiency, non-human animal","termid":"MONDO:1011729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin M deficiency, horse","secondary_identifiers":["OMIA:000556-9796"],"termid":"MONDO:1012135","xrefs":{"Monarch":{"xref_id":"1012135"}}}


id: PBO:0004720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin alpha","termid":"PBO:0004720"}


id: PBO:0004862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L13 (predicted)","termid":"PBO:0004862"}


id: MONDO:0002768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition characterized by the unequivocal presence of both testicular and ovarian tissues in an individual. It is usually manifested with ambiguous external genitalia.","definition_xrefs":["NCIT:C85207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of sexual differentiation","termid":"MONDO:0002145"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"true hermaphroditism","secondary_identifiers":["MEDGEN:78595","SCTID:237821001","DOID:3763","UMLS:C0266361"],"synonyms":[{"name":"hermaphroditism","type":"exact"},{"name":"ovotestis","type":"exact"},{"name":"true hermaphroditism","type":"exact"}],"termid":"MONDO:0002768","xrefs":{"Monarch":{"xref_id":"0002768"}}}


id: MONDO:0014061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic bone disease characterized by short stature, bilateral congenital hip dislocation, radial head dislocation, carpal coalition, scoliosis, pes cavus, and atlantoaxial subluxation. Dysmorphic facial features include broad forehead, broad nasal bridge, hypertelorism, and mild midface hypoplasia. Association with bilateral sensorineural hearing loss has also been described.","definition_xrefs":["Orphanet:438117"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with defective bone mineralization (obsolete MONDO:0019705)","termid":"MONDO:0019705"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Steel syndrome","secondary_identifiers":["OMIM:615155","MEDGEN:767508","GARD:17735","UMLS:C3554594"],"synonyms":[{"name":"STLS","type":"related"},{"name":"bilateral hip and radial head dislocations-short stature-scoliosis-carpal coalitions-pes cavus-facial dysmorphism syndrome","type":"exact"},{"name":"dislocated hips and radial heads, carpal coalition, scoliosis, and short stature","type":"related"},{"name":"steel syndrome","type":"exact"}],"termid":"MONDO:0014061","xrefs":{"Monarch":{"xref_id":"0014061"}}}


id: MONDO:0010788
data:
  {"annotated_genes":["SJAG_MIT15","SJAG_MIT13","SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85076,85077,85078],"is_not":false,"summary":null,"term":"MONDO:0010788"}]},"cv_name":"mondo","definition":"Leber's hereditary optic neuropathy (LHON) is a mitochondrial neurodegenerative disease affecting the optic nerve and often characterized by sudden vision loss in young adult carriers.","definition_xrefs":["Orphanet:104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0004069","MONDO:0005328","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"Leber hereditary optic neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:535000","DOID:705","MEDGEN:182973","MESH:D029242","icd11.foundation:1018428959","NANDO:1200178","NANDO:1200940","NCIT:C84808","NORD:1352","UMLS:C0917796","GARD:6870","SCTID:58610003"],"synonyms":[{"name":"LHON","type":"exact"},{"name":"Leber Hereditary optic atrophy","type":"exact"},{"name":"Leber hereditary optic neuropathy","type":"exact"},{"name":"Leber optic atrophy","type":"exact"},{"name":"Leber's hereditary optic neuropathy","type":"exact"},{"name":"Leber's optic atrophy","type":"exact"},{"name":"Leber’s disease","type":"related"},{"name":"optic atrophy, Leber type","type":"related"}],"termid":"MONDO:0010788","terms_by_termid":{"MONDO:0010788":null},"xrefs":{"Monarch":{"xref_id":"0010788"}}}


id: PR:O94524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1281.07c gene.","definition_xrefs":["UniProtKB:O94524","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase omega-like 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.07c","synonyms":[{"name":"Spom972h-SPCC1281.07c","type":"exact"},{"name":"glutathione-dependent dehydroascorbate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94524"}


id: PBO:0067891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 193","termid":"PBO:0067891"}


id: PBO:0051293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-16","termid":"PBO:0051293"}


id: PBO:0112691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex, GTPase regulator subunit Vtc1","termid":"PBO:0112691"}


id: MONDO:0003414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare, locally aggressive, malignant neoplasm of the hair follicle. The majority of the cases arise de novo, however malignant transformation from a pre-existing pilomatricoma has been reported. It usually presents as a solitary nodule in the head and neck, upper extremities, or buttocks. Morphologically, it is characterized by the presence of aggregates of basaloid cells infiltrating the dermis. Masses of ghost cells are present in the cellular aggregates. Complete surgical excision is the treatment of choice. If it is not completely removed, it usually recurs, but it rarely metastasizes to distant anatomic sites.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"skin appendage carcinoma","termid":"MONDO:0006973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin pilomatrix carcinoma","secondary_identifiers":["MEDGEN:108439","NCIT:C4114","GARD:22042","SCTID:307610008","ICDO:8110/3","DOID:5376","UMLS:C0585475","Orphanet:499182"],"synonyms":[{"name":"Pilomatrical carcinoma","type":"exact"},{"name":"Trichomatrical carcinoma","type":"exact"},{"name":"calcified epithelial carcinoma of Malherbe","type":"exact"},{"name":"calcifying epitheliocarcinoma","type":"exact"},{"name":"invasive pilomatrixoma","type":"exact"},{"name":"malignant pilomatricoma","type":"exact"},{"name":"matrical carcinoma","type":"exact"},{"name":"pilomatricoma, malignant","type":"exact"},{"name":"pilomatrix carcinoma","type":"exact"},{"name":"pilomatrix carcinoma of skin","type":"exact"},{"name":"pilomatrix carcinoma of the skin","type":"exact"},{"name":"pilomatrix skin carcinoma","type":"exact"}],"termid":"MONDO:0003414","xrefs":{"Monarch":{"xref_id":"0003414"}}}


id: PBO:0028346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_CENP-A_containing_chromatin","termid":"PBO:0028346"}


id: GO:0097686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A horn-shaped dinoflagellate apex found in thecate species.","definition_xrefs":["PMID:7002229","GOC:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinoflagellate apex","termid":"GO:0097683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate apical horn","termid":"GO:0097686"}


id: PBO:0060335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB","termid":"PBO:0060335"}


id: PBO:0043243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 3","termid":"PBO:0043243"}


id: MONDO:0010955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal dysplasia with intellectual disability and syndactyly","secondary_identifiers":["MEDGEN:322135","OMIM:600906","UMLS:C1833169","MESH:C538018"],"synonyms":[{"name":"ectodermal dysplasia intellectual disability syndactyly","type":"related"},{"name":"ectodermal dysplasia mental retardation syndactyly","type":"related"},{"name":"ectodermal dysplasia with intellectual disability and syndactyly","type":"exact"},{"name":"ectodermal dysplasia with mental retardation and syndactyly","type":"exact"}],"termid":"MONDO:0010955","xrefs":{"Monarch":{"xref_id":"0010955"}}}


id: GO:0031254
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile cell opposite to the direction of movement.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell trailing edge","synonyms":[{"name":"back of cell","type":"exact"},{"name":"trailing edge","type":"exact"}],"termid":"GO:0031254"}


id: PBO:0046997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 89 member B","termid":"PBO:0046997"}


id: PBO:0046558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group I member 1","termid":"PBO:0046558"}


id: PR:Q10218
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppc89 gene.","definition_xrefs":["UniProtKB:Q10218","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein ppc89 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.11c","synonyms":[{"name":"Spom972h-ppc89","type":"exact"},{"name":"meiotically up-regulated gene 127 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10218"}


id: PBO:0049209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 2C","termid":"PBO:0049209"}


id: PBO:0048906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member A","termid":"PBO:0048906"}


id: PBO:0048212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit pi","termid":"PBO:0048212"}


id: GO:0002569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of heavy chain immunoglobulin and T cell receptor genes. N regions are found at the V-D, D-D, V-J, and D-J recombinational junctions, depending on the immune receptor gene.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"}


id: PBO:0047495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A pseudogene 3","termid":"PBO:0047495"}


id: PBO:0070082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 39, pseudogene","termid":"PBO:0070082"}


id: PBO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty related protein Fft3","termid":"PBO:0001340"}


id: MONDO:0800425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary artery disease, severe, susceptibility to","secondary_identifiers":["MEDGEN:349546","UMLS:C1862591"],"termid":"MONDO:0800425","xrefs":{"Monarch":{"xref_id":"0800425"}}}


id: PBO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Dlc1","termid":"PBO:0001729"}


id: GO:0036497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a phosphate group from the translation initiation factor eIF2alpha, as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:16835242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"},{"relation_name":"is_a","term_name":"regulation of translational initiation by eIF2 alpha dephosphorylation","termid":"GO:0036496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","synonyms":[{"name":"eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0036497"}


id: GO:0010673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","PMID:8618927"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (obsolete GO:0010673)","synonyms":[{"name":"activation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of transcription from RNA polymerase II promoter, meiotic","type":"exact"},{"name":"stimulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0010673"}


id: PBO:0062201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily X member 1","termid":"PBO:0062201"}


id: GO:0051411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively and non-covalently with ALP, actinin-associated LIM protein of the Z band. ALP is a PDZ/LIM domain protein found in the Z band.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete ALP binding (obsolete GO:0051411)","synonyms":[{"name":"ALP binding","type":"exact"},{"name":"actinin-associated LIM protein binding","type":"exact"}],"termid":"GO:0051411"}


id: PBO:0079067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-1","termid":"PBO:0079067"}


id: MOD:00420
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 2-pyrrolidone-5-carboxylic acid.","definition_xrefs":["RESID:AA0031#GLU","Unimod:27#E","PubMed:10214721","PubMed:1836357","PubMed:3473473","OMSSA:109","DeltaMass:16","PubMed:8382902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"2-pyrrolidone-5-carboxylic acid","termid":"MOD:01048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-pyrrolidone-5-carboxylic acid (Glu)","synonyms":[{"name":"(2S)-5-oxo-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"2-oxopyrrolidine-5-carboxylic acid","type":"exact"},{"name":"2-pyrrolidone-5-carboxylic acid","type":"exact"},{"name":"5-oxoproline","type":"exact"},{"name":"5-oxopyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-pyrrolidone-2-carboxylic acid","type":"exact"},{"name":"Glu->pyro-Glu","type":"related"},{"name":"MOD_RES Pyrrolidone carboxylic acid (Glu)","type":"exact"},{"name":"PCA","type":"exact"},{"name":"PyrGlu(Glu)","type":"exact"},{"name":"Pyro-glu from E","type":"related"},{"name":"Pyroglutamic Acid formed from Glutamic Acid","type":"exact"},{"name":"ntermpeppyroe","type":"exact"},{"name":"pyroglutamic acid","type":"exact"}],"termid":"MOD:00420"}


id: GO:1905586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of outer hair cell apoptotic process.","definition_xrefs":["PMID:24472721","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"regulation of outer hair cell apoptotic process","termid":"GO:1905585"},{"relation_name":"negatively_regulates","term_name":"outer hair cell apoptotic process","termid":"GO:1905584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of outer hair cell apoptotic process","synonyms":[{"name":"down regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"down regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"down regulation of outer hair cell apoptosis","type":"narrow"},{"name":"down regulation of outer hair cell apoptotic process","type":"exact"},{"name":"down-regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"down-regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"down-regulation of outer hair cell apoptosis","type":"narrow"},{"name":"down-regulation of outer hair cell apoptotic process","type":"exact"},{"name":"downregulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"downregulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"downregulation of outer hair cell apoptosis","type":"narrow"},{"name":"downregulation of outer hair cell apoptotic process","type":"exact"},{"name":"inhibition of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"inhibition of cochlear outer hair cell apoptotic process","type":"narrow"},{"name":"inhibition of outer hair cell apoptosis","type":"narrow"},{"name":"inhibition of outer hair cell apoptotic process","type":"narrow"},{"name":"negative regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"negative regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"negative regulation of outer hair cell apoptosis","type":"narrow"}],"termid":"GO:1905586"}


id: FYPO:0004521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and branched (and septated), and undergoes one or two rounds of cell division and then dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated cell","termid":"FYPO:0001512"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, elongated cell","termid":"FYPO:0002724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, branched, elongated cell","synonyms":[{"name":"inviable after spore germination, single or double cell division, elongated and branched cell","type":"exact"},{"name":"inviable following spore germination, single or double cell division, branched, elongated cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, branched, elongated cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, branched, elongated cell","type":"exact"}],"termid":"FYPO:0004521"}


id: SO:0001274
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified inosine is an inosine base feature that has been altered.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine","termid":"SO:0001230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_inosine","synonyms":[{"name":"modified inosine","type":"exact"}],"termid":"SO:0001274"}


id: GO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-alanine from one side of a membrane to the other. Beta-alanine is 3-aminopropanoic acid.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"beta-alanine transmembrane transporter activity","synonyms":[{"name":"beta-alanine transporter activity","type":"broad"}],"termid":"GO:0001761"}


id: PBO:0000939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHCH domain","termid":"PBO:0000939"}


id: GO:0030621
data:
  {"annotated_genes":["SJAG_00531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92460],"is_not":false,"summary":null,"term":"GO:0030621"}]},"cv_name":"molecular_function","definition":"Binding to a U4 small nuclear RNA (U4 snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00531":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"U4 snRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030621","terms_by_termid":{"GO:0030621":null}}


id: GO:1990254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a keratin filament, an intermediate filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells.","definition_xrefs":["GOC:krc","PMID:6170061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament binding","termid":"GO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"keratin filament binding","termid":"GO:1990254"}


id: GO:0140650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial migration of a pyramidal neuron along radial glial cells.","definition_xrefs":["PMID:3760547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glia-guided pyramidal neuron migration","synonyms":[{"name":"radial glia-dependent neuronal migration","type":"exact"}],"termid":"GO:0140650"}


id: MOD:01878
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue and an L-threonine residue to L-threonine 5-hydroxyoxazole-4-carbothionic acid.","definition_xrefs":["RESID:AA0554","PubMed:20961038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Cys)","termid":"MOD:01856"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-threonine 5-hydroxyoxazole-4-carbonthionic acid","synonyms":[{"name":"(4Z)-2-[(1S,2R)-1-amino-2-hydroxypropyl]-4-(sulfanylmethylidene)-1,3-oxazol-5(4H)-one [tautomer]","type":"exact"},{"name":"2-[(1S,2R)-1-amino-2-hydroxypropyl]-5-hydroxy-1,3-oxazole-4-carbothioic O-acid","type":"exact"},{"name":"CROSSLNK Threonine 5-hydroxy-oxazole-4-carbonthionic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine 5-hydroxy-oxazole-4-carbonthionic acid","type":"exact"}],"termid":"MOD:01878"}


id: PBO:0036556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase inhibitor Inh1 (predicted)","termid":"PBO:0036556"}


id: GO:0070082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted monoamine transport vesicle.","definition_xrefs":["GOC:mg2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted monoamine transport vesicle","termid":"GO:0070081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"clathrin-sculpted monoamine transport vesicle lumen","synonyms":[{"name":"clathrin sculpted monoamine constitutive secretory pathway transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted monoamine transport vesicle lumen","type":"exact"}],"termid":"GO:0070082"}


id: PBO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, NIMA related Fin1","termid":"PBO:0000925"}


id: MOD:00433
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an glucose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"},{"relation_name":"is_a","term_name":"glucosylated","termid":"MOD:00726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"glucosylated residue","synonyms":[{"name":"GlcRes","type":"exact"}],"termid":"MOD:00433"}


id: PBO:0068397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 216","termid":"PBO:0068397"}


id: PBO:0057460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 579","termid":"PBO:0057460"}


id: MONDO:0859207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and gross motor and speech delay","secondary_identifiers":["MEDGEN:1794241","UMLS:C5562031","OMIM:619639"],"termid":"MONDO:0859207","xrefs":{"Monarch":{"xref_id":"0859207"}}}


id: MONDO:0008828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly-arthropathy-coxa-vara-pericarditis (CACP) syndrome is a rare, genetic, rheumatologic disease characterized by congenital or early-onset camptodactyly and symmetrical, polyarticular, non-inflammatory, large joint arthropathy with synovial hyperplasia, as well as progressive coxa vara deformity and, occasionally, non-inflammatory pericarditis.","definition_xrefs":["Orphanet:2848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"camptodactyly-arthropathy-coxa vara-pericarditis syndrome","secondary_identifiers":["UMLS:C1859690","GARD:306","EFO:0009028","DOID:0090127","MESH:C537560","MEDGEN:349226","OMIM:208250"],"synonyms":[{"name":"CACP","type":"exact"},{"name":"CACP syndrome","type":"exact"},{"name":"Jacobs syndrome","type":"exact"},{"name":"PAC syndrome","type":"exact"},{"name":"arthropathy camptodactyly syndrome","type":"related"},{"name":"arthropathy-camptodactyly syndrome","type":"exact"},{"name":"camptodactyly arthropathy coxa vara pericarditis syndrome","type":"related"},{"name":"camptodactyly arthropathy pericarditis syndrome","type":"related"},{"name":"camptodactyly-arthropathy-coxa vara-pericarditis syndrome","type":"exact"},{"name":"camptodactyly-arthropathy-coxa-vara-pericarditis syndrome","type":"related"},{"name":"camptodactyly-arthropathy-pericarditis syndrome","type":"exact"},{"name":"congenital familial hypertrophic synovitis","type":"exact"},{"name":"familial fibrosing serositis","type":"exact"},{"name":"fibrosing serositis, familial","type":"related"},{"name":"hypertrophic synovitis, congenital familial","type":"related"},{"name":"pericarditis arthropathy camptodactyly syndrome","type":"related"},{"name":"pericarditis-arthropathy-camptodactyly syndrome","type":"exact"}],"termid":"MONDO:0008828","xrefs":{"Monarch":{"xref_id":"0008828"}}}


id: MONDO:0005783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An accumulation of blood within the pericardial sac.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericardial effusion","termid":"MONDO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hemopericardium","secondary_identifiers":["SCTID:23412002","EFO:0007298","UMLS:C0019064","DOID:11482","MEDGEN:6795","HP:0011851","ICD9:423.0"],"synonyms":[{"name":"haemopericardium","type":"exact"},{"name":"hemopericardium","type":"exact"},{"name":"hemopericardium (disease)","type":"exact"}],"termid":"MONDO:0005783","xrefs":{"Monarch":{"xref_id":"0005783"}}}


id: MONDO:0010263
data:
  {"annotated_genes":["SJAG_05222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010516"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"partial deletion of the long arm of chromosome X","termid":"MONDO:0017007"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05222":null},"genotype_count":0,"is_obsolete":false,"name":"Alport syndrome-intellectual disability-midface hypoplasia-elliptocytosis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:720982007","Orphanet:86818","GARD:16761","DOID:0111860","MESH:C564570","MEDGEN:337424","UMLS:C1846242","OMIM:300194"],"synonyms":[{"name":"AMME complex","type":"exact"},{"name":"AMME syndrome","type":"exact"},{"name":"ATS-MR","type":"exact"},{"name":"Alport syndrome, intellectual disability, midface hypoplasia, and elliptocytosis","type":"related"},{"name":"Alport syndrome, mental retardation, midface hypoplasia, and elliptocytosis","type":"related"},{"name":"Ats-Mr","type":"related"},{"name":"chromosome Xq22.3 telomeric deletion syndrome","type":"related"}],"termid":"MONDO:0010263","terms_by_termid":{"MONDO:0010516":null},"xrefs":{"Monarch":{"xref_id":"0010263"}}}


id: PBO:0045565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 13","termid":"PBO:0045565"}


id: MOD:02014
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a linoloylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"linoloylated residue","termid":"MOD:02015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-linoloylated residue","termid":"MOD:02014"}


id: GO:0033341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of collagen binding.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of collagen binding (obsolete GO:0033341)","termid":"GO:0033341"}


id: PBO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 1","termid":"PBO:0060605"}


id: PBO:0079775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UGDH antisense RNA 1","termid":"PBO:0079775"}


id: PBO:0034585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_vegetative_cell_population_growth_followed_by_return_to_normal_growth_rate","termid":"PBO:0034585"}


id: PBO:0000594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methyl-5-thioadenosine phosphorylase (predicted)","termid":"PBO:0000594"}


id: MONDO:0010121
data:
  {"annotated_genes":["SJAG_01852"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86613],"is_not":false,"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","definition":"Thrombocytopenia-absent radius (TAR) syndrome is a very rare congenital malformation syndrome characterized by bilateral radial aplasia and thrombocytopenia.","definition_xrefs":["Orphanet:3320"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005497"],"is_obsolete":false,"name":"thrombocytopenia-absent radius syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1768","OMIM:274000","MedDRA:10071719","MESH:C536940","DECIPHER:64","ICD9:759.89","UMLS:C0175703","DOID:14699","NANDO:2200661","MEDGEN:61235","SCTID:85589009","GARD:5116","NCIT:C99038"],"synonyms":[{"name":"1q21.1 susceptibility locus for Thrombocytopenia-Absent Radius (TAR) syndrome","type":"exact"},{"name":"TAR","type":"related"},{"name":"TAR syndrome","type":"exact"},{"name":"Tar syndrome","type":"related"},{"name":"Thrombocytopenia Absent Radius Syndrome","type":"exact"},{"name":"absent radii and thrombocytopenia","type":"related"},{"name":"chromosome 1Q21.1 deletion syndrome, 200-Kb","type":"related"},{"name":"radial aplasia-thrombocytopenia syndrome","type":"exact"},{"name":"thrombocytopenia absent radii","type":"related"},{"name":"thrombocytopenia absent radius syndrome","type":"related"},{"name":"thrombocytopenia with absent radii (TAR) syndrome","type":"exact"},{"name":"thrombocytopenia-absent radius syndrome","type":"exact"}],"termid":"MONDO:0010121","terms_by_termid":{"MONDO:0010121":null},"xrefs":{"Monarch":{"xref_id":"0010121"}}}


id: PBO:0083855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Expressed copy (at MATa) of a1; homeobox-domain protein that, along with alpha2, represses transcription of haploid-specific genes in diploid cells; MATa1 pre-mRNA splicing requires Bud13p and Ist3p; a1 sequence is not present in SGD because the sequenced S288C strain is MATalpha, not MATa","termid":"PBO:0083855"}


id: PR:O94602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C622.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.15c","synonyms":[{"name":"Spom972h-SPCC622.15c","type":"exact"}],"termid":"PR:O94602"}


id: MONDO:0023017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplication of the thumb unilateral biphalangeal","termid":"MONDO:0023017","xrefs":{"Monarch":{"xref_id":"0023017"}}}


id: PBO:0030928
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_citrate_(Si)-synthase_activity","termid":"PBO:0030928"}


id: MONDO:0012271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesoaxial synostotic syndactyly (MSSD) with phalangeal reduction is a novel and distinct form of non-syndromic syndactyly including complete syndactyly of the 3rd and 4th fingers with synostoses of the corresponding metacarpals and associated single phalanges, syndactyly of the 2nd and 3rd toes and 5th finger clinodactyly.","definition_xrefs":["Orphanet:157801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoaxial synostotic syndactyly with phalangeal reduction","secondary_identifiers":["UMLS:C1836206","OMIM:609432","GARD:10590","MESH:C563721","MEDGEN:324459","SCTID:724170007"],"synonyms":[{"name":"MSSD","type":"exact"},{"name":"syndactyly Malik-Percin type","type":"related"},{"name":"syndactyly mesoaxial synostotic with phalangeal reduction","type":"related"},{"name":"syndactyly type 9","type":"exact"},{"name":"syndactyly, Malik-Percin type","type":"exact"},{"name":"syndactyly, mesoaxial synostotic, with phalangeal reduction","type":"related"},{"name":"syndactyly, type 9","type":"related"}],"termid":"MONDO:0012271","xrefs":{"Monarch":{"xref_id":"0012271"}}}


id: MONDO:0100428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive bulbar palsy of childhood that occurs during childhood.","definition_xrefs":["MONDO:patterns/childhood"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive bulbar palsy","termid":"MONDO:0008890"},{"relation_name":"is_a","term_name":"Brown-Vialetto-van Laere syndrome 1","termid":"MONDO:0024537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"progressive bulbar palsy of childhood","secondary_identifiers":["OMIM:211500","MEDGEN:41975","Orphanet:56965","UMLS:C0015708","SCTID:230246005","DOID:0080632"],"synonyms":[{"name":"Fazio-Londe disease","type":"exact"}],"termid":"MONDO:0100428","xrefs":{"Monarch":{"xref_id":"0100428"}}}


id: GO:0009511
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Endoplasmic reticulum found in plasmodesmata, junctions connecting the cytoplasm of adjacent plant cells.","definition_xrefs":["PMID:29880547","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum","termid":"GO:0005783"},{"relation_name":"part_of","term_name":"plasmodesmatal desmotubule","termid":"GO:0009510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737","GO:0005886"],"is_obsolete":false,"name":"plasmodesmatal endoplasmic reticulum","synonyms":[{"name":"plasmodesmatal ER","type":"exact"}],"termid":"GO:0009511"}


id: GO:2000813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of barbed-end actin filament capping.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of actin filament depolymerization","termid":"GO:0030836"},{"relation_name":"is_a","term_name":"positive regulation of actin filament polymerization","termid":"GO:0030838"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of barbed-end actin filament capping","termid":"GO:2000812"},{"relation_name":"negatively_regulates","term_name":"barbed-end actin filament capping","termid":"GO:0051016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0007010","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of barbed-end actin filament capping","synonyms":[{"name":"negative regulation of barbed-end F-actin capping activity","type":"exact"},{"name":"negative regulation of barbed-end actin capping activity","type":"exact"},{"name":"negative regulation of plus-end F-actin capping activity","type":"exact"},{"name":"negative regulation of plus-end actin filament capping activity","type":"exact"}],"termid":"GO:2000813"}


id: PBO:0086126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for function of the Sit4p protein phosphatase; member of a family of similar proteins that form complexes with Sit4p, including Sap155p, Sap185p, and Sap190p; SAP4 has a paralog, SAP155, that arose from the whole genome duplication","termid":"PBO:0086126"}


id: SO:0000960
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, circular DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"single_stranded_DNA_chromosome","termid":"SO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_single_stranded_DNA_chromosome","synonyms":[{"name":"circular single stranded DNA chromosome","type":"exact"}],"termid":"SO:0000960"}


id: PBO:0083558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene PKH2/YOL100W; may interact with ribosomes","termid":"PBO:0083558"}


id: SO:0001939
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 12th residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K12_acetylation_site","synonyms":[{"name":"H4K12 acetylation site","type":"exact"},{"name":"H4K12ac","type":"exact"}],"termid":"SO:0001939"}


id: MONDO:0009406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cantu syndrome is a rare disorder characterized by congenital hypertrichosis, osteochondrodysplasia, cardiomegaly, and dysmorphism.","definition_xrefs":["Orphanet:1517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hypertrichotic osteochondrodysplasia Cantu type","secondary_identifiers":["SCTID:239087008","DOID:0060569","MESH:C535572","UMLS:C0795905","OMIM:239850","MEDGEN:208647","GARD:8585"],"synonyms":[{"name":"Cantu syndrome","type":"exact"},{"name":"Craniofaciocardioskeletal syndrome","type":"related"},{"name":"hypertrichotic osteochondrodysplasia","type":"related"},{"name":"hypertrichotic osteochondrodysplasia (Cantu syndrome)","type":"exact"},{"name":"hypertrichotic osteochondrodysplasia, Cantu type","type":"related"}],"termid":"MONDO:0009406","xrefs":{"Monarch":{"xref_id":"0009406"}}}


id: PATO:0002538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality that obtains by virtue of the bearer being concave on one side and convex on the other.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/concavo-convex"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concavo-convex","synonyms":[{"name":"concavoconvex","type":"exact"}],"termid":"PATO:0002538"}


id: MONDO:0004928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of the lymph nodes.","definition_xrefs":["NCIT:C35346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymph node disorder","secondary_identifiers":["SCTID:76616003","DOID:9942","MEDGEN:78802","UMLS:C0272394"],"synonyms":[{"name":"disease of lymph node","type":"exact"},{"name":"disease or disorder of lymph node","type":"exact"},{"name":"disorder of lymph node","type":"exact"},{"name":"lymph node disease","type":"exact"},{"name":"lymph node disease or disorder","type":"exact"},{"name":"lymph node disorder","type":"exact"}],"termid":"MONDO:0004928","xrefs":{"Monarch":{"xref_id":"0004928"}}}


id: MONDO:0006488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive mixed epithelial and mesenchymal neoplasm that arises from the vagina and is characterized by the presence of a malignant epithelial component and a malignant mesenchymal component.","definition_xrefs":["NCIT:C40278"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vaginal carcinoma","termid":"MONDO:0015867"},{"relation_name":"is_a","term_name":"malignant vaginal mixed epithelial and mesenchymal neoplasm","termid":"MONDO:0037746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal carcinosarcoma","secondary_identifiers":["DOID:136","UMLS:C1519918","MEDGEN:275573"],"synonyms":[{"name":"malignant vaginal mixed epithelial and mesenchymal tumor","type":"related"},{"name":"malignant vaginal mixed epithelial and mesenchymal tumour","type":"related"},{"name":"vaginal carcinosarcoma","type":"exact"},{"name":"vaginal malignant mixed Mullerian tumor","type":"related"},{"name":"vaginal malignant mixed Mullerian tumour","type":"related"},{"name":"vaginal malignant mixed mesodermal (Mullerian) tumor","type":"related"},{"name":"vaginal malignant mixed mesodermal (Mullerian) tumour","type":"related"},{"name":"vaginal malignant mixed mesodermal (Müllerian) tumor","type":"exact"},{"name":"vaginal malignant mixed mesodermal (Müllerian) tumour","type":"exact"},{"name":"vaginal mixed epithelial and mesenchymal tumor","type":"related"},{"name":"vaginal mixed epithelial and mesenchymal tumour","type":"related"}],"termid":"MONDO:0006488","xrefs":{"Monarch":{"xref_id":"0006488"}}}


id: PBO:0047155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 184 member A","termid":"PBO:0047155"}


id: MONDO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autonomic peripheral neuropathy (obsolete MONDO:0000604)","termid":"MONDO:0000604","xrefs":{"Monarch":{"xref_id":"0000604"}}}


id: MONDO:0019256
data:
  {"annotated_genes":["SJAG_02855","SJAG_03509","SJAG_03018","SJAG_03024","SJAG_00717","SJAG_01474","SJAG_04865","SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[85587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[86278,86279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[86146,86147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[84602,84601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[85318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014793"},{"annotations":[86745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of sterol metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"steroid metabolism disease","termid":"MONDO:0045012"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01474":null,"SJAG_02855":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03509":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"sterol metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18981","UMLS:C5681277","MEDGEN:1842986","Orphanet:79226"],"synonyms":[{"name":"inborn error of sterol metabolic process","type":"exact"},{"name":"inborn sterol metabolic process disorder","type":"exact"},{"name":"rare inborn error of sterol metabolic process","type":"exact"}],"termid":"MONDO:0019256","terms_by_termid":{"MONDO:0008974":null,"MONDO:0009849":null,"MONDO:0010035":null,"MONDO:0010621":null,"MONDO:0011816":null,"MONDO:0012481":null,"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0019256"}}}


id: MONDO:0012648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inborn error of valine metabolism. The prevalence is unknown. Only one symptomatic patient (with anemia, failure to thrive, dilated cardiomyopathy and plasma carnitine deficiency) has been described so far, but several series of patients have been identified through newborn screening programs relying on detection of increased C(4)-carnitine levels by tandem mass spectrometry. The disorder is caused by mutations in the ACAD8 gene (11q25).","definition_xrefs":["Orphanet:79159"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"isobutyryl-CoA dehydrogenase deficiency","secondary_identifiers":["NCIT:C129975","OMIM:611283","UMLS:C1969809","GARD:10223","MESH:C535541","MEDGEN:370754"],"synonyms":[{"name":"Acad8 deficiency","type":"related"},{"name":"IBD deficiency","type":"related"},{"name":"acyl-Coa dehydrogenase family, member 8, deficiency of","type":"related"},{"name":"acyl-CoaA dehydrogenase family, member 8, deficiency of","type":"related"},{"name":"isobutyric aciduria","type":"exact"},{"name":"isobutyryl-CoA dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0012648","xrefs":{"Monarch":{"xref_id":"0012648"}}}


id: FYPO:0006216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which establishment of actomyosin contractile ring localization is normal (i.e. indistinguishable from wild type). Establishment of actomyosin contractile ring localization is the part of cytokinesis in which the actomyosin contractile ring is assembled in a specific location.","definition_xrefs":["GO:1903486","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal establishment of actomyosin contractile ring localization","synonyms":[{"name":"normal establishment of actomyosin contractile ring localisation","type":"exact"},{"name":"normal establishment of actomyosin contractile ring localization during mitotic cell cycle","type":"related"},{"name":"normal establishment of actomyosin contractile ring localization during vegetative growth","type":"exact"},{"name":"normal establishment of actomyosin contractile ring positioning","type":"exact"},{"name":"normal establishment of cytokinetic contractile ring localization","type":"exact"},{"name":"normal establishment of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"normal establishment of mitotic contractile ring localization","type":"exact"}],"termid":"FYPO:0006216"}


id: MONDO:0011165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fibronectin glomerulopathy in which the cause of the disease is a mutation in the FN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibronectin glomerulopathy","termid":"MONDO:0007671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"glomerulopathy with fibronectin deposits 2","secondary_identifiers":["OMIM:601894","UMLS:C1866075","GARD:9914","MEDGEN:356149","SCTID:722759007"],"synonyms":[{"name":"FN1 fibronectin glomerulopathy","type":"exact"},{"name":"GFND2","type":"related"},{"name":"fibronectin glomerulopathy","type":"related"},{"name":"fibronectin glomerulopathy caused by mutation in FN1","type":"exact"},{"name":"glomerular nephritis familial with fibronectin deposits","type":"related"},{"name":"glomerular nephritis, familial, with fibronectin deposits","type":"related"},{"name":"glomerulopathy with fibronectin deposits 2","type":"exact"},{"name":"glomerulopathy with fibronectin deposits type 2","type":"exact"}],"termid":"MONDO:0011165","xrefs":{"Monarch":{"xref_id":"0011165"}}}


id: PBO:0076484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARBP2 pseudogene 1","termid":"PBO:0076484"}


id: PBO:0040203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense transcript of PTP4A3, liver carcinoma survival associated","termid":"PBO:0040203"}


id: MONDO:1011651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and juvenile mortality, non-human animal","secondary_identifiers":["OMIA:002256"],"termid":"MONDO:1011651","xrefs":{"Monarch":{"xref_id":"1011651"}}}


id: GO:0047804
data:
  {"annotated_genes":["SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113377],"is_not":false,"summary":null,"term":"GO:0047804"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-substituted L-cysteine + H2O = a thiol + NH4+ + pyruvate.","definition_xrefs":["RHEA:18121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cysteine-S-conjugate beta-lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.4.1.13","MetaCyc:RXN-6763"],"synonyms":[{"name":"L-cysteine-S-conjugate thiol-lyase (deaminating) activity","type":"related"},{"name":"L-cysteine-S-conjugate thiol-lyase (deaminating; pyruvate-forming)","type":"related"},{"name":"S-alkylcysteine lyase activity","type":"related"},{"name":"alkylcysteine lyase activity","type":"related"},{"name":"cystathionine beta-lyase activity","type":"related"},{"name":"cysteine conjugate beta-lyase activity","type":"related"},{"name":"cysteine-S-conjugate b-lyase activity","type":"exact"},{"name":"glutamine transaminase K/cysteine conjugate beta-lyase activity","type":"related"}],"termid":"GO:0047804","terms_by_termid":{"GO:0047804":null}}


