# terms

id: PBO:0050542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1 pseudogene 3","termid":"PBO:0050542"}


id: GO:2000887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a glucuronoarabinoxylan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronoarabinoxylan metabolic process","termid":"GO:0010414"},{"relation_name":"is_a","term_name":"glucuronoxylan catabolic process","termid":"GO:2000886"},{"relation_name":"is_a","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glucuronoarabinoxylan catabolic process","synonyms":[{"name":"glucuronoarabinoxylan catabolism","type":"exact"}],"termid":"GO:2000887"}


id: GO:0070316
data:
  {"annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99061,117527,115427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070317"}]},"cv_name":"biological_process","definition":"A cell cycle process that modulates the rate or extent of the transition from the G0 quiescent state to the G1 phase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"G0 to G1 transition","termid":"GO:0045023"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of G0 to G1 transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070316","terms_by_termid":{"GO:0070317":null}}


id: PATO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of a spoon.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/spoon-shaped"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spoon-shaped","termid":"PATO:0002208"}


id: GO:0001641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that is activated by trans-1-aminocyclopentane-1,3-dicarboxylic acid (t-ACPD) and inhibits adenylate cyclase activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase inhibiting G protein-coupled glutamate receptor activity","termid":"GO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"group II metabotropic glutamate receptor activity","termid":"GO:0001641"}


id: PBO:0078834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (GGG) 1-1","termid":"PBO:0078834"}


id: PBO:0108938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 17","termid":"PBO:0108938"}


id: PBO:0042747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein U","termid":"PBO:0042747"}


id: PBO:0080217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vimentin 2, pseudogene","termid":"PBO:0080217"}


id: GO:1902253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway by p53 class mediator.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl","PMID:15705871","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:0072332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway by p53 class mediator","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"regulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902253"}


id: GO:0062100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of programmed necrotic cell death.","definition_xrefs":["PMID:27258785","GOC:rph","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of programmed necrotic cell death","termid":"GO:0062098"},{"relation_name":"positively_regulates","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of programmed necrotic cell death","termid":"GO:0062100"}


id: GO:0045225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of CD4.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of CD4 production","termid":"GO:0045223"},{"relation_name":"negatively_regulates","term_name":"CD4 biosynthetic process","termid":"GO:0045222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD4 production","synonyms":[{"name":"down regulation of CD4 biosynthetic process","type":"exact"},{"name":"down-regulation of CD4 biosynthetic process","type":"exact"},{"name":"downregulation of CD4 biosynthetic process","type":"exact"},{"name":"inhibition of CD4 biosynthetic process","type":"narrow"},{"name":"negative regulation of CD4 anabolism","type":"exact"},{"name":"negative regulation of CD4 biosynthesis","type":"exact"},{"name":"negative regulation of CD4 biosynthetic process","type":"exact"},{"name":"negative regulation of CD4 formation","type":"exact"},{"name":"negative regulation of CD4 synthesis","type":"exact"}],"termid":"GO:0045225"}


id: GO:0031876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a secretin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"secretin receptor binding","synonyms":[{"name":"secretin receptor ligand","type":"narrow"}],"termid":"GO:0031876"}


id: PBO:0003369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp1 (predicted)","termid":"PBO:0003369"}


id: PBO:0090159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component End3","termid":"PBO:0090159"}


id: MONDO:0006106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign mesenchymal neoplasm arising from smooth muscle tissue.","definition_xrefs":["NCIT:C6510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign muscle neoplasm","termid":"MONDO:0003061"},{"relation_name":"is_a","term_name":"smooth muscle tumor","termid":"MONDO:0006975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign smooth muscle neoplasm","secondary_identifiers":["MEDGEN:231944","UMLS:C1332539","EFO:1000121"],"synonyms":[{"name":"benign neoplasm of smooth muscle","type":"exact"},{"name":"benign neoplasm of the smooth muscle","type":"exact"},{"name":"benign smooth muscle neoplasm","type":"exact"},{"name":"benign smooth muscle tumor","type":"exact"},{"name":"benign smooth muscle tumour","type":"exact"},{"name":"benign tumor of smooth muscle","type":"exact"},{"name":"benign tumor of the smooth muscle","type":"exact"},{"name":"benign tumour of smooth muscle","type":"exact"},{"name":"benign tumour of the smooth muscle","type":"exact"},{"name":"smooth muscle tissue benign neoplasm","type":"exact"}],"termid":"MONDO:0006106","xrefs":{"Monarch":{"xref_id":"0006106"}}}


id: PBO:0073706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI8 subunit of superkiller complex","termid":"PBO:0073706"}


id: PBO:0091409
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during meiotic recombination Rad51 foci partially colocalize with linear elements","termid":"PBO:0091409"}


id: PBO:0047726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin 1","termid":"PBO:0047726"}


id: PBO:0039003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFDN divergent transcript","termid":"PBO:0039003"}


id: PBO:0076214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 and UNC84 domain containing 1","termid":"PBO:0076214"}


id: FYPO:0005300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is decreased during mitotic spindle assembly checkpoint signaling.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during mitotic M phase","termid":"FYPO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during mitotic spindle assembly checkpoint signaling","synonyms":[{"name":"decreased protein localisation to kinetochore during mitotic spindle assembly checkpoint signalling","type":"exact"},{"name":"decreased protein localization to kinetochore during mitotic cell cycle spindle assembly checkpoint signaling","type":"exact"},{"name":"decreased protein localization to kinetochore during signal transduction involved in mitotic spindle assembly checkpoint","type":"exact"},{"name":"decreased protein localization to kinetochore during spindle assembly checkpoint signaling during mitotic cell cycle","type":"exact"},{"name":"defective protein recruitment to unattached kinetochores","type":"exact"},{"name":"reduced protein localization to kinetochore during mitotic spindle assembly checkpoint signaling","type":"exact"}],"termid":"FYPO:0005300"}


id: MONDO:0004228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypogonadotropism (obsolete MONDO:0004228)","termid":"MONDO:0004228","xrefs":{"Monarch":{"xref_id":"0004228"}}}


id: PBO:0076167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 3","termid":"PBO:0076167"}


id: PBO:0049127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member D","termid":"PBO:0049127"}


id: GO:0006056
data:
  {"annotated_genes":["SJAG_02519","SJAG_01264","SJAG_04906","SJAG_00816","SJAG_03082","SJAG_01276","SJAG_00598","SJAG_01021","SJAG_04770"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87021,100255,104419,108477,105430,97385,117811,104534,103992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mannoprotein, a protein that contains covalently bound mannose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannoprotein metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mannoprotein metabolism","type":"exact"}],"termid":"GO:0006056","terms_by_termid":{"GO:0000032":null}}


id: MONDO:0018504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the stomach and is characterized by the absence of microscopic features of glandular or squamous differentiation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"},{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated carcinoma of stomach","secondary_identifiers":["SCTID:766757006","UMLS:C1336858","GARD:21759","MEDGEN:237029","NCIT:C5476","ONCOTREE:USTAD","Orphanet:423786"],"synonyms":[{"name":"Gastric undifferentiated carcinoma","type":"exact"},{"name":"anaplastic carcinoma of stomach","type":"exact"},{"name":"anaplastic carcinoma of the stomach","type":"exact"},{"name":"anaplastic gastric carcinoma","type":"exact"},{"name":"stomach undifferentiated carcinoma","type":"exact"},{"name":"undifferentiated carcinoma of stomach","type":"exact"},{"name":"undifferentiated carcinoma of the stomach","type":"exact"},{"name":"undifferentiated gastric (stomach) cancer","type":"exact"},{"name":"undifferentiated gastric carcinoma","type":"exact"},{"name":"undifferentiated stomach adenocarcinoma","type":"related"}],"termid":"MONDO:0018504","xrefs":{"Monarch":{"xref_id":"0018504"}}}


id: PBO:0069252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 507, pseudogene","termid":"PBO:0069252"}


id: PR:Q10066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aru1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase Aru1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.07","synonyms":[{"name":"SPAC3H1.07","type":"related"},{"name":"Spom972h-aru1","type":"exact"}],"termid":"PR:Q10066"}


id: MONDO:0000214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypermanganesemia with dystonia","secondary_identifiers":["DOID:0080535","UMLS:C4708509","MEDGEN:1632594","OMIMPS:613280","SCTID:768553002"],"termid":"MONDO:0000214","xrefs":{"Monarch":{"xref_id":"0000214"}}}


id: GO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate.","definition_xrefs":["PMID:16429326","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate 4-kinase activity","termid":"GO:0000830"}


id: PBO:0047073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member B","termid":"PBO:0047073"}


id: PBO:0070764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11","termid":"PBO:0070764"}


id: PBO:0050266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 44","termid":"PBO:0050266"}


id: GO:0015264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of methylammonium through a transmembrane aqueous pore or channel. Methylammonium is CH3NH2.","definition_xrefs":["GOC:pr","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylammonium transmembrane transporter activity","termid":"GO:0015200"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"methylammonium channel activity","termid":"GO:0015264"}


id: MONDO:0010237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-plagiocephaly syndrome is characterized by severe intellectual deficit, brachycephaly, plagiocephaly, prominent forehead and coarse facial features. It has been described in two males from one family. Two females belonging to the same family displayed moderate intellectual deficit but no craniofacial dysmorphism.","definition_xrefs":["Orphanet:2898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005497"],"is_obsolete":false,"name":"X-linked intellectual disability-plagiocephaly syndrome","secondary_identifiers":["GARD:2765","MESH:C537512","MEDGEN:419824","SCTID:719812008","OMIM:300064","UMLS:C2931516"],"synonyms":[{"name":"Hyde Forster McCarthy Berry syndrome","type":"related"},{"name":"Hyde Forster-McCarthy-Berry syndrome","type":"exact"},{"name":"intellectual disability, X-linked Hyde-Forster type","type":"related"},{"name":"intellectual disability, X-linked, Hyde-Forster type","type":"related"},{"name":"intellectual disability, X-linked, with craniofacial dysmorphism","type":"related"},{"name":"intellectual disability, plagiocephaly, brachycephaly, prominent forehead, and coarse facial features","type":"related"},{"name":"mental retardation, X-linked Hyde-Forster type","type":"related"},{"name":"mental retardation, X-linked, Hyde-Forster type","type":"related"},{"name":"mental retardation, X-linked, with craniofacial dysmorphism","type":"related"},{"name":"mental retardation, plagiocephaly, brachycephaly, prominent forehead, and coarse facial features","type":"related"},{"name":"plagiocephaly and X-linked intellectual disability","type":"related"},{"name":"plagiocephaly and X-linked mental retardation","type":"related"}],"termid":"MONDO:0010237","xrefs":{"Monarch":{"xref_id":"0010237"}}}


id: MONDO:0018570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypophosphatasia (HPP) is a rare heritable metabolic disorder characterized by defective mineralization of bone and/or teeth in the presence of reduced activity of unfractionated serum alkaline phosphatase (ALP). The clinical spectrum is extremely wide, from stillbirth at one end to fractures of the lower extremities in adulthood, at the other, or even no bone manifestations (odontohypophosphatasia).","definition_xrefs":["Orphanet:436"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with defective bone mineralization (obsolete MONDO:0019705)","termid":"MONDO:0019705"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005066"],"is_obsolete":false,"name":"hypophosphatasia","secondary_identifiers":["DOID:14213","ICD9:277.6","MEDGEN:43799","ICD10CM:E83.3","MESH:D007014","NANDO:2201012","NCIT:C26798","icd11.foundation:422012968","UMLS:C0020630","MedDRA:10049933","GARD:6734","SCTID:360792001","NANDO:1200656"],"synonyms":[{"name":"HPP","type":"exact"},{"name":"Rathburn disease","type":"exact"},{"name":"childhood hypophosphatasia","type":"narrow"},{"name":"deficiency of alkaline phosphatase","type":"exact"},{"name":"deficiency of alkaline phosphatase (disorder) [ambiguous]","type":"exact"},{"name":"hypophospatasia, childhood","type":"narrow"},{"name":"hypophosphatasia mild","type":"narrow"},{"name":"phosphoethanol-aminuria","type":"related"},{"name":"phosphoethanolaminuria","type":"exact"}],"termid":"MONDO:0018570","xrefs":{"Monarch":{"xref_id":"0018570"}}}


id: GO:0021687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellar molecular layer is generated and organized. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellar molecular layer development","termid":"GO:0021679"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer morphogenesis","termid":"GO:0021687"}


id: MONDO:0008988
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id: GO:0070888
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id: PBO:0069650
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id: PBO:0081942
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id: GO:0002213
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id: GO:0009758
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary carbohydrate sources,usually glucose, and then activates genes to scavenge the last traces of the primary carbohydrate source and to transport and metabolize alternate carbohydrate sources. The utilization process begins when the cell or organism detects carbohydrate levels, includes the activation of genes whose products detect, transport or metabolize carbohydrates, and ends when the carbohydrate is incorporated into the cell or organism's metabolism.","definition_xrefs":["GOC:mcc2","GOC:mlg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbohydrate utilization","secondary_identifiers":["GO:0007587"],"synonyms":[{"name":"sugar utilization","type":"narrow"}],"termid":"GO:0009758"}


id: PBO:0043730
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 9","termid":"PBO:0043730"}


id: FYPO:0004225
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of nucleosome binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"abnormal nucleosome binding","termid":"FYPO:0004225"}


id: MONDO:0011793
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id: PBO:0014597
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id: PBO:0073318
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id: PBO:0091841
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id: GO:1904319
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id: PBO:0041006
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id: MONDO:0024462
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id: FYPO:0006520
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id: PBO:0089571
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id: MONDO:0020541
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id: PBO:0064831
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id: PBO:0032765
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id: PR:O94584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pps1 gene.","definition_xrefs":["UniProtKB:O94584","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--serine O-phosphatidyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.12","synonyms":[{"name":"Spom972h-pps1","type":"exact"},{"name":"phosphatidylserine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94584"}


id: PBO:0011491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0011491"}


id: GO:0070500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving poly-gamma-glutamate, a polymer of D- and/or L-glutamic acid residues linked by gamma-peptidyl bonds.","definition_xrefs":["GOC:mah","PMID:16689787"],"gene_count":0,"genotype_count":0,"name":"obsolete poly-gamma-glutamate metabolic process (obsolete GO:0070500)","synonyms":[{"name":"poly-gamma-glutamate metabolism","type":"exact"}],"termid":"GO:0070500"}


id: PATO:0000220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000220 regeneration (obsolete PATO:0000220)","termid":"PATO:0000220"}


id: GO:0009850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving auxins, a group of plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auxin metabolic process","synonyms":[{"name":"auxin metabolism","type":"exact"}],"termid":"GO:0009850"}


id: MONDO:0009028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare syndrome characterized by poorly mineralized calvarium, facial dysmorphism, vertebral abnormalities and absent clavicles.","definition_xrefs":["Orphanet:1512"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crane-Heise syndrome","secondary_identifiers":["GARD:8428","SCTID:715991005","MESH:C536452","MEDGEN:387847","OMIM:218090","UMLS:C1857532"],"synonyms":[{"name":"Crane-Heise syndrome","type":"exact"},{"name":"cleft Lip/palate, agenesis of clavicles and cervical vertebrae, and talipes equinovarus","type":"related"}],"termid":"MONDO:0009028","xrefs":{"Monarch":{"xref_id":"0009028"}}}


id: PBO:0079926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upregulator of cell proliferation","termid":"PBO:0079926"}


id: MONDO:0006717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, intermediate, or malignant mesenchymal neoplasm composed of fibrohistiocytic cells, spindle fibroblastic cells, and histiocytes, in a storiform pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"benign fibrous histiocytoma","termid":"MONDO:0002989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous fibrous histiocytoma","secondary_identifiers":["UMLS:C0002991","DOID:4418","MEDGEN:1930","NCIT:C6801","ONCOTREE:DF","SCTID:448015002","EFO:1000885","ICDO:8832/0"],"synonyms":[{"name":"DF","type":"related"},{"name":"benign cutaneous fibrous histiocytoma","type":"exact"},{"name":"benign fibrous cutaneous histiocytoma","type":"exact"},{"name":"benign fibrous histiocytoma of skin","type":"exact"},{"name":"benign fibrous histiocytoma of the skin","type":"exact"},{"name":"benign skin fibrous histiocytoma","type":"exact"},{"name":"cutaneous fibrous histiocytoma","type":"exact"},{"name":"dermatofibroma","type":"exact"},{"name":"dermatofibroma, no ICD-O subtype","type":"exact"},{"name":"dermatofibroma, no ICD-O subtype (morphologic abnormality)","type":"exact"},{"name":"fibrohistiocytic neoplasm","type":"exact"},{"name":"fibrohistiocytic tumor","type":"related"},{"name":"fibrohistiocytic tumour","type":"related"},{"name":"fibrous histiocytoma of skin","type":"exact"},{"name":"fibrous histiocytoma of the skin","type":"exact"},{"name":"fibrous xanthoma of skin","type":"exact"},{"name":"pleomorphic fibroma","type":"related"},{"name":"sclerosing angioma","type":"exact"},{"name":"sclerosing angioma (morphologic abnormality)","type":"exact"},{"name":"sclerosing angioma of skin","type":"exact"}],"termid":"MONDO:0006717","xrefs":{"Monarch":{"xref_id":"0006717"}}}


id: PBO:0114115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/TATA-binding protein associated factor/transcription factor TFIID complex WD repeat subunit Taf5","termid":"PBO:0114115"}


id: PBO:0064217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCB2 antisense RNA 1","termid":"PBO:0064217"}


id: MONDO:0004160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The involuntary loss of urine in females secondary to insufficient strength of the pelvic floor muscles; this can result from physical changes following pregnancy and childbirth, or as a response to a decrease in estrogen during menopause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female stress incontinence","secondary_identifiers":["NCIT:C35042","UMLS:C0038437","ICD9:625.6","DOID:724","MEDGEN:21346"],"synonyms":[{"name":"female urinary stress incontinence","type":"exact"},{"name":"stress incontinence - female","type":"exact"}],"termid":"MONDO:0004160","xrefs":{"Monarch":{"xref_id":"0004160"}}}


id: GO:0070287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ferritin, and delivering ferritin into the cell via endocytosis.","definition_xrefs":["GOC:bf","PMID:17459943","PMID:19154717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"ferritin receptor activity","synonyms":[{"name":"ferritin complex receptor activity","type":"exact"}],"termid":"GO:0070287"}


id: SO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters; Positioned from +28 to +32 with respect to the TSS (+1). Experimental results suggest that the DPE acts in conjunction with the INR_motif to provide a binding site for TFIID in the absence of a TATA box to mediate transcription of TATA-less promoters. Consensus sequence (A|G)G(A|T)(C|T)(G|A|C).","definition_xrefs":["PMID:12651739","PMID:12515390","PMID:12537576","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPE_motif","synonyms":[{"name":"CRWMGCGWKCGCTTS","type":"narrow"},{"name":"DPE motif","type":"exact"},{"name":"downstream core promoter element","type":"exact"}],"termid":"SO:0000015"}


id: PBO:0013826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein Atg16","termid":"PBO:0013826"}


id: GO:0050051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene B4 + O2 + reduced [NADPH-hemoprotein reductase] = 20-hydroxy-leukotriene B4 + H+ + H2O + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["PMID:8486631","PMID:15364545","PMID:9675028","PMID:11461919","RHEA:22176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"leukotriene-B4 20-monooxygenase activity","secondary_identifiers":["MetaCyc:LEUKOTRIENE-B4-20-MONOOXYGENASE-RXN","Reactome:R-HSA-211873","EC:1.14.14.94"],"synonyms":[{"name":"LTB(4) 20-hydroxylase activity","type":"related"},{"name":"LTB(4) omega-hydroxylase activity","type":"related"},{"name":"LTB4 20-hydroxylase activity","type":"related"},{"name":"LTB4 omega-hydroxylase activity","type":"related"},{"name":"leukotriene-B4 20-hydroxylase activity","type":"related"},{"name":"leukotriene-B4 omega-hydroxylase activity","type":"related"}],"termid":"GO:0050051"}


id: PATO:0001319
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A discrimination quality in a bearer by virtue of the bearer's being capable of perceiving differences between two or more stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"discrimination","termid":"PATO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discriminate","termid":"PATO:0001319"}


id: PBO:0029100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sulfate_import","termid":"PBO:0029100"}


id: FYPO:0003044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is abnormal. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PomBase:mah","GO:0031507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal heterochromatin assembly","synonyms":[{"name":"abnormal heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"abnormal heterochromatin assembly during vegetative growth","type":"exact"},{"name":"abnormal heterochromatin formation","type":"exact"}],"termid":"FYPO:0003044"}


id: PBO:0089575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A inhibitor Sds23/Moc1","termid":"PBO:0089575"}


id: PBO:0003593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 h4.2","termid":"PBO:0003593"}


id: PBO:0005319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn13b","termid":"PBO:0005319"}


id: PBO:0109010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143 Y-linked pseudogene","termid":"PBO:0109010"}


id: GO:0097309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the ribose of the first nucleotide of a 5'-capped mRNA.","definition_xrefs":["GOC:sp","PMID:20713356"],"gene_count":0,"genotype_count":0,"name":"obsolete cap1 mRNA methylation (obsolete GO:0097309)","synonyms":[{"name":"cap1 mRNA capping","type":"broad"}],"termid":"GO:0097309"}


id: GO:0016273
data:
  {"annotated_genes":["SJAG_02271","SJAG_03548","SJAG_02756","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008469"},{"annotations":[94492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019702"},{"annotations":[112107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016274"},{"annotations":[99915,112108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035242"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a methyl group from S-adenosyl-L-methionine to an amino group of an arginine residue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_02271":null,"SJAG_02756":null,"SJAG_03548":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"arginine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016273","terms_by_termid":{"GO:0008469":null,"GO:0016274":null,"GO:0019702":null,"GO:0035242":null}}


id: PBO:0052266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4A","termid":"PBO:0052266"}


id: PR:Q9P332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC750.04c/SPAC977.02.","definition_xrefs":["UniProtKB:Q9P332","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein C750.04c/C977.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.02","synonyms":[{"name":"Spom972h-SPAC977.02","type":"exact"}],"termid":"PR:Q9P332"}


id: MONDO:0017020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease specific to childhood associated with a systemic disease (obsolete MONDO:0017020)","secondary_identifiers":["Orphanet:264699"],"synonyms":[{"name":"secondary ILD specific to childhood associated with a systemic disease","type":"exact"}],"termid":"MONDO:0017020","xrefs":{"Monarch":{"xref_id":"0017020"}}}


id: GO:1903520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mammary gland involution.","definition_xrefs":["GOC:TermGenie","PMID:23164222","GO_REF:0000058","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of mammary gland involution","termid":"GO:1903519"},{"relation_name":"negatively_regulates","term_name":"mammary gland involution","termid":"GO:0060056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mammary gland involution","synonyms":[{"name":"down regulation of mammary gland involution","type":"exact"},{"name":"down-regulation of mammary gland involution","type":"exact"},{"name":"downregulation of mammary gland involution","type":"exact"},{"name":"inhibition of mammary gland involution","type":"narrow"}],"termid":"GO:1903520"}


id: PBO:0062664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily F member 1","termid":"PBO:0062664"}


id: PBO:0083617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex; catalyzes the direct oxidative decarboxylation of pyruvate to acetyl-CoA; phosphorylated; regulated by glucose; PDH complex is concentrated in spots within the mitochondrial matrix, often near the ERMES complex and near peroxisomes","termid":"PBO:0083617"}


id: FYPO:0007317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation in the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic translation","termid":"FYPO:0003124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased cytoplasmic translation","synonyms":[{"name":"decreased cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic translation during vegetative growth","type":"exact"},{"name":"reduced cytoplasmic translation","type":"exact"}],"termid":"FYPO:0007317"}


id: PBO:0043587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 1","termid":"PBO:0043587"}


id: PBO:0071922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 7","termid":"PBO:0071922"}


id: PBO:0053613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 649","termid":"PBO:0053613"}


id: GO:1900204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in metanephric collecting duct development.","definition_xrefs":["GOC:TermGenie","PMID:17314325","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephric collecting duct development","termid":"GO:0072205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900204"}


id: MONDO:0003583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atypical lipomatous tumor (obsolete MONDO:0003583)","termid":"MONDO:0003583","xrefs":{"Monarch":{"xref_id":"0003583"}}}


id: GO:0000390
data:
  {"annotated_genes":["SJAG_03301","SJAG_00597","SJAG_02560","SJAG_00206","SJAG_05025"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87292,88506,89699,104002,113304],"is_not":false,"summary":null,"term":"GO:0000390"}]},"cv_name":"biological_process","definition":"Disassembly of a spliceosomal complex with the ATP-dependent release of the product RNAs, one of which is composed of the joined exons. In cis splicing, the other product is the excised sequence, often a single intron, in a lariat structure.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex disassembly","termid":"GO:0032988"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00206":null,"SJAG_00597":null,"SJAG_02560":null,"SJAG_03301":null,"SJAG_05025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"spliceosomal complex disassembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000391","GO:0000392"],"synonyms":[{"name":"U12-type spliceosome disassembly","type":"narrow"},{"name":"U2-type spliceosome disassembly","type":"narrow"},{"name":"spliceosome complex disassembly","type":"exact"},{"name":"spliceosome disassembly","type":"broad"}],"termid":"GO:0000390","terms_by_termid":{"GO:0000390":null}}


id: GO:0006186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into dGDP, deoxyguanosine diphosphate, to produce dGTP.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete dGDP phosphorylation (obsolete GO:0006186)","termid":"GO:0006186"}


id: MONDO:0000974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adipose tissue neoplasm of the axilla.","definition_xrefs":["NCIT:C35419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign axillary neoplasm","termid":"MONDO:0036781"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axillary lipoma","secondary_identifiers":["MEDGEN:87575","SCTID:188993006","DOID:10205","UMLS:C0347429","ICD9:214.8"],"synonyms":[{"name":"axilla lipoma","type":"exact"},{"name":"axillary lipoma","type":"exact"},{"name":"lipoma of axilla","type":"exact"}],"termid":"MONDO:0000974","xrefs":{"Monarch":{"xref_id":"0000974"}}}


id: GO:0047177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-2-lyso-sn-glycero-3-phosphoethanolamine + 1-alkyl-2-arachidonyl-sn-glycero-3-phosphocholine = 1-alkyl-2-lyso-sn-glycero-3-phosphocholine + 1-alkyl-2-arachidonyl-sn-glycero-3-phosphoethanolamine.","definition_xrefs":["EC:2.3.1.147","MetaCyc:2.3.1.147-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glycerophospholipid arachidonoyl-transferase (CoA-independent) activity","secondary_identifiers":["RHEA:15409"],"synonyms":[{"name":"1-organyl-2-arachidonoyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phosphoethanolamine arachidonoyltransferase (CoA-independent)","type":"related"},{"name":"1-organyl-2-arachidonyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phosphoethanolamine arachidonoyltransferase (CoA-independent)","type":"related"}],"termid":"GO:0047177"}


id: PATO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000825 visual ability value (obsolete PATO:0000825)","termid":"PATO:0000825"}


id: GO:0009334
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Enzyme complex consisting of four proteins: the two subunits of the hydroxylase component (hcaE and hcaF), a ferredoxin (hcaC) and a ferredoxin reductase (hcaD). Converts 3-phenylpropionic acid (PP) into cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol).","definition_xrefs":["MetaCyc:HCAMULTI-CPLX","GOC:jl","PMID:9603882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"3-phenylpropionate dioxygenase complex","termid":"GO:0009334"}


id: SOFP:protein_id
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A protein sequence identifier","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_id","termid":"SOFP:protein_id"}


id: PBO:0080318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 82 pseudogene","termid":"PBO:0080318"}


id: MONDO:0035548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to partial jak1 deficiency","secondary_identifiers":["UMLS:C5680361","Orphanet:574957","ICD10CM:D84.8","MEDGEN:1830105"],"synonyms":[{"name":"Autosomal recessive MSMD due to partial JAK1 deficiency","type":"exact"}],"termid":"MONDO:0035548","xrefs":{"Monarch":{"xref_id":"0035548"}}}


id: PBO:0040257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 12","termid":"PBO:0040257"}


id: PBO:0041759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclase associated actin cytoskeleton regulatory protein 2 pseudogene 1","termid":"PBO:0041759"}


id: GO:0101014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [isocitrate dehydrogenase] phosphate + H2O = [isocitrate dehydrogenase] + phosphate.","definition_xrefs":["PMID:6292732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0004721","GO:0003674","GO:0016788","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"[isocitrate dehydrogenase (NADP+)] phosphatase activity","secondary_identifiers":["MetaCyc:ICITDEHASE-KIN-PHOSPHA"],"synonyms":[{"name":"isocitrate dehydrogenase kinase/phosphatase activity","type":"broad"}],"termid":"GO:0101014"}


id: MONDO:0013258
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86843],"is_not":false,"summary":null,"term":"MONDO:0013258"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613410","UMLS:C3150677","MEDGEN:462027"],"synonyms":[{"name":"AUTS16","type":"related"},{"name":"autism susceptibility 16","type":"exact"},{"name":"autism with or without seizures","type":"related"},{"name":"autism, susceptibility to, 16","type":"exact"},{"name":"autism, susceptibility to, type 16","type":"exact"},{"name":"susceptibility to autism 16","type":"related"}],"termid":"MONDO:0013258","terms_by_termid":{"MONDO:0013258":null},"xrefs":{"Monarch":{"xref_id":"0013258"}}}


id: MONDO:0005268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Hashimoto's thyroiditis (obsolete MONDO:0005268)","termid":"MONDO:0005268","xrefs":{"Monarch":{"xref_id":"0005268"}}}


id: MONDO:0018552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urachal sinus is a type of congenital urachal anomaly resulting from the failure of the umbilical end of the urachus to close, without continuity to the bladder, and that is usually asymptomatic but can present with continuous cloudy umbilical discharge, tender midline infraumbilical mass and fever when infected.","definition_xrefs":["Orphanet:431344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital urachal anomaly","termid":"MONDO:0018565"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urachal sinus","secondary_identifiers":["MEDGEN:758682","SCTID:451030007","UMLS:C3472657","GARD:21799","icd11.foundation:1174996735"],"termid":"MONDO:0018552","xrefs":{"Monarch":{"xref_id":"0018552"}}}


id: MONDO:0012407
data:
  {"annotated_genes":["SJAG_01881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85027],"is_not":false,"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","definition":"A very rare neonatal epileptic encephalopathy disorder characterized clinically by onset of severe seizures within hours of birth that are not responsive to anticonvulsants, but are responsive to treatment with pyridoxal phosphate.","definition_xrefs":["Orphanet:79096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of pyridoxine metabolism","termid":"MONDO:0019237"},{"relation_name":"is_a","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005027"],"is_obsolete":false,"name":"pyridoxal phosphate-responsive seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:604024463","MESH:C566449","UMLS:C1864723","GARD:10730","DOID:0111329","MEDGEN:350498","OMIM:610090","icd11.foundation:1632334328","SCTID:724576005"],"synonyms":[{"name":"PNPO deficiency","type":"exact"},{"name":"PNPO-related neonatal epileptic encephalopathy","type":"exact"},{"name":"PNPOD","type":"related"},{"name":"Pnpo deficiency","type":"related"},{"name":"epileptic encephalopathy, neonatal, Pnpo-related","type":"related"},{"name":"pyridox(am)ine 5’-phosphate oxidase deficiency","type":"exact"},{"name":"pyridoxal 5'-phosphate-dependent epilepsy","type":"related"},{"name":"pyridoxal phosphate-dependent seizures","type":"exact"},{"name":"pyridoxamine 5'-oxidase deficiency","type":"exact"},{"name":"pyridoxamine 5'-phosphate oxidase deficiency","type":"exact"},{"name":"pyridoxamine 5-prime-phosphate oxidase deficiency","type":"related"},{"name":"pyridoxine 5' phosphate oxidase deficiency","type":"exact"},{"name":"pyridoxine-5'-phosphate oxidase deficiency","type":"related"},{"name":"seizures, pyridoxine-resistant, PLP-sensitive","type":"related"}],"termid":"MONDO:0012407","terms_by_termid":{"MONDO:0012407":null},"xrefs":{"Monarch":{"xref_id":"0012407"}}}


id: GO:0006073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues, occurring at the level of an individual cell.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular glucan metabolic process (obsolete GO:0006073)","synonyms":[{"name":"cellular glucan metabolism","type":"exact"}],"termid":"GO:0006073"}


id: GO:0010240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A plastid complex that carries out the oxidative decarboxylation of pyruvate to form acetyl-CoA; comprises subunits possessing three catalytic activities: pyruvate dehydrogenase (E1), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). This complex is found in plant plastids and is distinct from the one found in mitochondria.","definition_xrefs":["PMID:9393637","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid pyruvate dehydrogenase complex (obsolete GO:0010240)","synonyms":[{"name":"dehydrogenase complex","type":"broad"}],"termid":"GO:0010240"}


id: SO:0001077
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region traversing the lipid bilayer.","definition_xrefs":["EBIBS:GAR","UniProt:curator_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramembrane_polypeptide_region","termid":"SO:0001075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"transmembrane_polypeptide_region","secondary_identifiers":["BS:00158"],"synonyms":[{"name":"transmem","type":"related"},{"name":"transmembrane","type":"related"},{"name":"transmembrane polypeptide region","type":"exact"}],"termid":"SO:0001077"}


id: PBO:0013829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo-family BRCT domain protein Ppp1 (predicted)","termid":"PBO:0013829"}


id: PBO:0059389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S24","termid":"PBO:0059389"}


id: GO:0060805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of transcription from an RNA polymerase II promoter ultimately resulting in a decrease in trophoblast stem cells differentiating into the more mature cells of the trophoblast.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of trophoblast cell differentiation by transcription regulation from RNA polymerase II promoter (obsolete GO:0060805)","termid":"GO:0060805"}


id: SO:0000997
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A portion of a gene that is not the complete gene.","direct_ancestors":[{"relation_name":"has_quality","term_name":"fragmentary","termid":"SO:0000731"},{"relation_name":"is_a","term_name":"gene_component_region","termid":"SO:0000842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_fragment","synonyms":[{"name":"gene fragment","type":"exact"}],"termid":"SO:0000997"}


id: PBO:0055157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2576","termid":"PBO:0055157"}


id: PBO:0091015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC domain protein Ats1","termid":"PBO:0091015"}


id: GO:0035297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that the Malpighian tubule is the correct width. Malpighian tubules have a uniform circumference along their length; the circumference of the tubes is eight cells during the time the cells are dividing, after which the cells rearrange producing tubes with a cirumference of two cells.","definition_xrefs":["PMID:9286684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube diameter","termid":"GO:0035296"},{"relation_name":"is_a","term_name":"regulation of Malpighian tubule size","termid":"GO:0035298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Malpighian tubule diameter","termid":"GO:0035297"}


id: FYPO:0006966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetyl-CoA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular acetyl-CoA level","synonyms":[{"name":"increased acetyl-CoA accumulation","type":"related"},{"name":"increased cellular acetyl-CoA level during mitotic cell cycle","type":"related"},{"name":"increased cellular acetyl-CoA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006966"}


id: GO:0034756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of iron ions (Fe) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"iron ion transport","termid":"GO:0006826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of iron ion transport","secondary_identifiers":["GO:1900390"],"synonyms":[{"name":"regulation of Fe transport","type":"exact"},{"name":"regulation of iron import","type":"narrow"},{"name":"regulation of iron ion import","type":"narrow"},{"name":"regulation of iron transport","type":"exact"}],"termid":"GO:0034756"}


id: PBO:0087664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner nuclear membrane Asi ubiquitin ligase complex; Asi complex targets both misfolded proteins of the inner nuclear membrane-associated degradation (INMAD) pathway and regulators of sterol biosynthesis for ubiquitin-mediated degradation; acts with Asi1p and Asi2p to ensure the fidelity of SPS-sensor signaling by targeting latent unprocessed forms of Stp1p and Stp2p, maintaining the repressed state of gene expression in the absence of inducing amino acids","termid":"PBO:0087664"}


id: FYPO:0001601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"abnormal vacuole","termid":"FYPO:0002794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered level of substance in vacuole","synonyms":[{"name":"abnormal level of substance in vacuole","type":"exact"},{"name":"abnormal level of substance in vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar level of substance","type":"exact"},{"name":"altered level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"altered vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001601"}


id: GO:0038197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that binds a type I interferon and transmits the signal across the membrane into the cell. Consists of an alpha subunit (IFNAR1) and a beta subunit (IFNAR2).","definition_xrefs":["PMID:17502368","GOC:cjm","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"type I interferon receptor complex","synonyms":[{"name":"interferon-alpha/beta receptor complex","type":"narrow"}],"termid":"GO:0038197"}


id: PBO:0053287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 1","termid":"PBO:0053287"}


id: GO:0140531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of osmosensory signaling MAPK cascade.","definition_xrefs":["PMID:31911490"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of osmosensory signaling MAPK cascade (obsolete GO:0140531)","termid":"GO:0140531"}


id: _global:has_relative_magnitude
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_relative_magnitude","termid":"_global:has_relative_magnitude"}


id: GO:0019307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannose metabolic process","termid":"GO:0006013"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"mannose biosynthetic process","synonyms":[{"name":"mannose anabolism","type":"exact"},{"name":"mannose biosynthesis","type":"exact"},{"name":"mannose formation","type":"exact"},{"name":"mannose synthesis","type":"exact"}],"termid":"GO:0019307"}


id: MONDO:0060759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures","secondary_identifiers":["UMLS:C4748127","GARD:22396","MEDGEN:1648345","Orphanet:597623","OMIM:618088","DOID:0081327"],"synonyms":[{"name":"IRF2BPL-related regressive neurodevelopmental disorder-dystonia-seizures syndrome","type":"exact"},{"name":"NEDAMSS","type":"related"},{"name":"neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures","type":"exact"}],"termid":"MONDO:0060759","xrefs":{"Monarch":{"xref_id":"0060759"}}}


id: FYPO:0001652
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during nitrogen starvation","termid":"FYPO:0001648"},{"relation_name":"is_a","term_name":"abnormal lysine import","termid":"FYPO:0001651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal lysine import during nitrogen starvation","synonyms":[{"name":"abnormal L-lysine import across plasma membrane during nitrogen starvation","type":"exact"},{"name":"abnormal L-lysine import during nitrogen starvation","type":"exact"},{"name":"abnormal lysine import during nitrogen depletion","type":"exact"},{"name":"abnormal lysine import during nitrogen deprivation","type":"exact"},{"name":"abnormal lysine import into cell during nitrogen starvation","type":"exact"},{"name":"abnormal lysine uptake during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001652"}


id: MONDO:1011762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"verrucous epidermal keratinocytic nevi, non-human animal","secondary_identifiers":["OMIA:002117"],"termid":"MONDO:1011762","xrefs":{"Monarch":{"xref_id":"1011762"}}}


id: GO:1903691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of wound healing, spreading of epidermal cells.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18394891","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of wound healing","termid":"GO:0090303"},{"relation_name":"is_a","term_name":"regulation of wound healing, spreading of epidermal cells","termid":"GO:1903689"},{"relation_name":"positively_regulates","term_name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of wound healing, spreading of epidermal cells","synonyms":[{"name":"activation of wound healing, spreading of epidermal cells","type":"narrow"},{"name":"up regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"up-regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"upregulation of wound healing, spreading of epidermal cells","type":"exact"}],"termid":"GO:1903691"}


id: PBO:0060862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 5","termid":"PBO:0060862"}


id: GO:0033500
data:
  {"annotated_genes":["SJAG_02444","SJAG_04312","SJAG_04026","SJAG_01254","SJAG_04495","SJAG_03081","SJAG_01699","SJAG_01754","SJAG_00472","SJAG_00574","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116006,108471,105962,93734,101338,105373,106311,108977,114974],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[97497,94033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001678"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state of a carbohydrate within an organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical homeostasis","termid":"GO:0048878"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbohydrate homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033500","terms_by_termid":{"GO:0001678":null,"GO:0010619":null}}


id: GO:0003963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate.","definition_xrefs":["EC:6.5.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"ligase activity, forming phosphoric ester bonds","termid":"GO:0016886"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0016874","GO:0009975"],"is_obsolete":false,"name":"RNA-3'-phosphate cyclase activity","secondary_identifiers":["RHEA:23976","MetaCyc:RNA-3-PHOSPHATE-CYCLASE-RXN"],"synonyms":[{"name":"RNA 3'-terminal phosphate cyclase activity","type":"related"},{"name":"RNA cyclase activity","type":"related"},{"name":"RNA-3'-phosphate:RNA ligase (cyclizing, AMP-forming)","type":"related"}],"termid":"GO:0003963"}


id: MOD:00659
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to a methylated glutamine, either 2-methylated glutamine, N5-methylated glutamine, or methyl esterified deamidated glutamine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated glutamine","synonyms":[{"name":"MeGln","type":"exact"}],"termid":"MOD:00659"}


id: GO:0055078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of sodium ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"sodium ion homeostasis","termid":"GO:0055078"}


id: MONDO:0021176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune hepatitis characterized by the presence of anti-liver kidney microsomal antibody type 1 (anti-LKM1) and/or anti-liver cytosol type 1 (anti-LC1) autoantibodies.","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hepatitis","termid":"MONDO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune hepatitis type 2","secondary_identifiers":["MEDGEN:928832","Orphanet:563581","GARD:22252","icd11.foundation:61111843","SCTID:721712002","UMLS:C4303163"],"synonyms":[{"name":"autoimmune hepatitis type 2","type":"exact"},{"name":"type 2 AIH","type":"exact"}],"termid":"MONDO:0021176","xrefs":{"Monarch":{"xref_id":"0021176"}}}


id: GO:0015850
data:
  {"annotated_genes":["SJAG_04506","SJAG_02962","SJAG_00261","SJAG_00671","SJAG_01722","SJAG_01329","SJAG_02375","SJAG_00355","SJAG_01590","SJAG_03718","SJAG_03595","SJAG_02323","SJAG_02152","SJAG_03652","SJAG_03808","SJAG_01407"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[101154,100967,105798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"},{"annotations":[87927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"},{"annotations":[92079,97545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"},{"annotations":[89651,116911,118184,89650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[89653,89652,116912,118185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[116913,118186,89654,89655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"},{"annotations":[108823,107667,110781,115668,93755,102101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015918"}]},"cv_name":"biological_process","definition":"The directed movement of an organic hydroxy compound (organic alcohol) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. An organic hydroxy compound is an organic compound having at least one hydroxy group attached to a carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00355":null,"SJAG_00671":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02152":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02962":null,"SJAG_03595":null,"SJAG_03652":null,"SJAG_03718":null,"SJAG_03808":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"organic hydroxy compound transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"organic alcohol transport","type":"exact"}],"termid":"GO:0015850","terms_by_termid":{"GO:0015918":null,"GO:0032366":null,"GO:0120011":null,"GO:1903090":null,"GO:1903091":null,"GO:1903092":null,"GO:1904679":null,"GO:1990556":null}}


id: PBO:0039589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 7","termid":"PBO:0039589"}


id: MONDO:0018618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sexual development due to dihydrotestosterone backdoor pathway biosynthesis defect (obsolete MONDO:0018618)","secondary_identifiers":["Orphanet:443090"],"termid":"MONDO:0018618","xrefs":{"Monarch":{"xref_id":"0018618"}}}


id: PBO:0074693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70C","termid":"PBO:0074693"}


id: PBO:0035715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_methylation_during_vegetative_growth","termid":"PBO:0035715"}


id: PBO:0060591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurocalcin delta","termid":"PBO:0060591"}


id: PATO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction from a higher to a lower point.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"down","termid":"PATO:0000365"}


id: PBO:0001612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U6","termid":"PBO:0001612"}


id: MONDO:0030071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa 89","secondary_identifiers":["UMLS:C5394552","DOID:0112146","OMIM:618955","MEDGEN:1710499"],"synonyms":[{"name":"RETINITIS PIGMENTOSA 89","type":"exact"},{"name":"RP89","type":"exact"},{"name":"retinitis pigmentosa 89","type":"exact"}],"termid":"MONDO:0030071","xrefs":{"Monarch":{"xref_id":"0030071"}}}


id: PBO:0041004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC-1 related complex subunit 6","termid":"PBO:0041004"}


id: GO:0038132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuregulin, a member of the EGF family of growth factors.","definition_xrefs":["GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neuregulin binding","termid":"GO:0038132"}


id: PBO:0073244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 2 pseudogene 1","termid":"PBO:0073244"}


id: MONDO:0013356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vesicoureteral reflux in which the cause of the disease is a mutation in the SOX17 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux 3","secondary_identifiers":["MEDGEN:462277","OMIM:613674","GARD:18420","UMLS:C3150927"],"synonyms":[{"name":"SOX17 vesicoureteral reflux (disease)","type":"exact"},{"name":"VUR3","type":"related"},{"name":"vesicoureteral reflux (disease) caused by mutation in SOX17","type":"exact"},{"name":"vesicoureteral reflux 3","type":"exact"},{"name":"vesicoureteral reflux type 3","type":"exact"}],"termid":"MONDO:0013356","xrefs":{"Monarch":{"xref_id":"0013356"}}}


id: PBO:0059884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 7","termid":"PBO:0059884"}


id: PBO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Latrunculin Sensitive Kinase","termid":"PBO:0002305"}


id: GO:0090557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of a barrier between endothelial cell layers of the intestine to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.","definition_xrefs":["GOC:krc","PMID:22155109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of endothelial intestinal barrier","termid":"GO:0090557"}


id: GO:0140447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cleavage of a peptide bond in a precursor form of a cytokine, resulting in the mature (active) form of the cytokine.","definition_xrefs":["PMID:29247995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor ligand precursor processing","termid":"GO:0140448"},{"relation_name":"part_of","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"cytokine precursor processing","synonyms":[{"name":"interleukin maturation","type":"narrow"},{"name":"interleukin processing","type":"narrow"}],"termid":"GO:0140447"}


id: PBO:0083101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA end-binding protein required for nonhomologous end joining (NHEJ); subunit of the DNA ligase IV complex involved in initial end binding, intermolecular ligation, and DNA ligase reactivation after completion of repair; phosphorylation by Tpk1p is required for DNA damage induced NHEJ and for nuclear targeting of Nej1p and Lif1p; human homolog NHEJ1 is phosphorylated by human Tpk1p homolog PRKACB, regulating NHEJ; transcriptionally repressed by MAT heterozygosity","termid":"PBO:0083101"}


id: PBO:0059311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51 pseudogene 2","termid":"PBO:0059311"}


id: PBO:0089649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery monothiol glutaredoxin Grx3","termid":"PBO:0089649"}


id: PBO:0042163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 24","termid":"PBO:0042163"}


id: PATO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000346 sporophyte compatible value (obsolete PATO:0000346)","termid":"PATO:0000346"}


id: MONDO:0020857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 7","secondary_identifiers":["MEDGEN:1648458","UMLS:C4748263","OMIM:618117","GARD:18043","DOID:0080499"],"synonyms":[{"name":"ODG7","type":"exact"},{"name":"OVARIAN DYSGENESIS 7","type":"exact"}],"termid":"MONDO:0020857","xrefs":{"Monarch":{"xref_id":"0020857"}}}


id: MONDO:0000193
data:
  {"annotated_genes":["SJAG_02148","SJAG_02696"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85096,85097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"}]},"cv_name":"mondo","definition":"A disorder in which there is a failure to regenerate the active glucocorticoid cortisol from cortisone via 11beta-HSD1. The resulting lack of cortisol regeneration stimulates ACTH-mediated adrenal hyperandrogenism, with males manifesting in childhood with precocious pseudopuberty and females presenting in adolescence and early adulthood with hirsutism, oligoamenorrhea, and infertility.","definition_xrefs":["PMID:21325058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"adrenogenital syndrome","termid":"MONDO:0015898"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02148":null,"SJAG_02696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"cortisone reductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:168588","SCTID:124138004","UMLS:C1291245","GARD:9882","OMIMPS:604931","MEDGEN:266223","DOID:0090139","ICD9:277.6","MESH:C536447"],"synonyms":[{"name":"11-alpha beta-hydroxysteroid dehydrogenase type I deficiency of","type":"related"},{"name":"11-beta-hydroxysteroid dehydrogenase deficiency type 1","type":"exact"},{"name":"CORTRD","type":"exact"},{"name":"HSD 11B1 deficiency","type":"narrow"},{"name":"deficiency of (R)-20-hydroxysteroid dehydrogenase","type":"exact"},{"name":"deficiency of cortisone reductase","type":"exact"},{"name":"hyperandrogenism due to cortisone reductase deficiency","type":"exact"}],"termid":"MONDO:0000193","terms_by_termid":{"MONDO:0011503":null},"xrefs":{"Monarch":{"xref_id":"0000193"}}}


id: MONDO:0100561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild microcytic anemia caused by biallelic variation in the HBA1 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic alpha thalassemia spectrum","termid":"MONDO:0100565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"HBA1-related alpha thalassemia spectrum","synonyms":[{"name":"alpha-thalassemia trait","type":"related"}],"termid":"MONDO:0100561","xrefs":{"Monarch":{"xref_id":"0100561"}}}


id: MOD:01987
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-serine.","definition_xrefs":["RESID:AA0624","PubMed:21786372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked D-serine residue","termid":"MOD:02064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(L-cystein-S-yl)-D-serine","synonyms":[{"name":"(2R,5S)-2,5-diamino-5-carboxy-6-hydroxy-4-thiahexanoic acid","type":"exact"},{"name":"(2S)-2-amino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-3-hydroxypropanoic acid","type":"exact"}],"termid":"MOD:01987"}


id: PBO:0066657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal oxygenase 1","termid":"PBO:0066657"}


id: PBO:0004645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb2","termid":"PBO:0004645"}


id: MOD:00464
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N'-formyl-L-kynurenine.","definition_xrefs":["PubMed:9252331","OMSSA:45","PubMed:12686488","Unimod:425#W","DeltaMass:356","PubMed:12124932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N'-formyl-L-kynurenine","synonyms":[{"name":"Dioxidation","type":"related"},{"name":"Double oxidation of Trp","type":"exact"},{"name":"dihydroxy","type":"related"},{"name":"formylkynureninw","type":"exact"},{"name":"tryptophan oxidation to formylkynurenin","type":"related"}],"termid":"MOD:00464"}


id: GO:0120070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any stomach fundus smooth muscle contraction.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stomach fundus smooth muscle contraction","termid":"GO:0120068"},{"relation_name":"is_a","term_name":"negative regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904305"},{"relation_name":"negatively_regulates","term_name":"stomach fundus smooth muscle contraction","termid":"GO:0014825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomach fundus smooth muscle contraction","termid":"GO:0120070"}


id: MOD:01782
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N-methyl-L-serine.","definition_xrefs":["PubMed:20668449","RESID:AA0533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"},{"relation_name":"is_a","term_name":"N-methylated serine","termid":"MOD:01800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-serine","synonyms":[{"name":"(2S)-3-hydroxy-2-(methylamino)propanoic acid","type":"exact"},{"name":"MOD_RES N-methylserine","type":"exact"},{"name":"N-methyl-L-serine","type":"exact"},{"name":"N-methylserine","type":"exact"}],"termid":"MOD:01782"}


id: FYPO:0003516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ergothioneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular L-ergothioneine level during vegetative growth","synonyms":[{"name":"increased L-ergothioneine level during vegetative growth","type":"exact"},{"name":"increased cellular L-ergothioneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003516"}


id: GO:0047118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dioxo-6-phenylhexanoate + NADP+ = 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H+ + NADPH.","definition_xrefs":["EC:1.3.1.40","RHEA:24268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate reductase activity","secondary_identifiers":["KEGG_REACTION:R03463","MetaCyc:1.3.1.40-RXN"],"synonyms":[{"name":"2,6-dioxo-6-phenylhexanoate:NADP+ delta2-oxidoreductase activity","type":"related"},{"name":"2-hydroxy-6-oxo-phenylhexa-2,4-dienoate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"}],"termid":"GO:0047118"}


id: PBO:0064010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 44","termid":"PBO:0064010"}


id: MONDO:0003819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature or immature teratoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric ovarian germ cell tumor","termid":"MONDO:0003760"},{"relation_name":"is_a","term_name":"ovarian teratoma","termid":"MONDO:0005602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood teratoma of the ovary","secondary_identifiers":["MEDGEN:272466","DOID:6230","NCIT:C6554","UMLS:C1332992"],"synonyms":[{"name":"childhood ovarian teratoma","type":"exact"},{"name":"childhood teratoma of ovary","type":"exact"},{"name":"childhood teratoma of the ovary","type":"exact"},{"name":"ovarian teratoma of childhood","type":"exact"},{"name":"paediatric ovarian teratoma","type":"exact"},{"name":"paediatric teratoma of ovary","type":"exact"},{"name":"paediatric teratoma of the ovary","type":"exact"},{"name":"pediatric ovarian teratoma","type":"exact"},{"name":"pediatric teratoma of ovary","type":"exact"},{"name":"pediatric teratoma of the ovary","type":"exact"}],"termid":"MONDO:0003819","xrefs":{"Monarch":{"xref_id":"0003819"}}}


id: SO:1000111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that changes the amino acid sequence of the peptide in such a way that it changes the 3D structure of the molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000111 sequence_variant_affecting_3D_structure_of_polypeptide (obsolete SO:1000111)","synonyms":[{"name":"mutation affecting 3D structure of polypeptide","type":"related"},{"name":"mutation causing partially characterised 3D structural change","type":"related"},{"name":"mutation causing uncharacterised 3D structural change","type":"related"},{"name":"sequence variant affecting 3D structure of polypeptide","type":"exact"},{"name":"sequence variant affecting 3D-structure of polypeptide","type":"exact"},{"name":"sequence variant causing partially characterised 3D structural change","type":"exact"},{"name":"sequence variant causing uncharacterised 3D structural change","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_3D_structural_change","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_3D_structural_change","type":"exact"}],"termid":"SO:1000111"}


id: PBO:0064284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing O1","termid":"PBO:0064284"}


id: PBO:0075527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E7, pseudogene","termid":"PBO:0075527"}


id: PBO:0074848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 38A","termid":"PBO:0074848"}


id: PBO:0047620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculogenesis specific bHLH transcription factor","termid":"PBO:0047620"}


id: FYPO:0004892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an echinocandin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on echinocandin","synonyms":[{"name":"normal cell population growth in presence of echinocandin","type":"exact"},{"name":"normal cell population growth on echinocandin","type":"exact"},{"name":"normal cellular response to echinocandin","type":"related"},{"name":"normal vegetative cell population growth on echinocandin","type":"exact"}],"termid":"FYPO:0004892"}


id: GO:0010545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to and modulates the activity of the molecular chaperone Hsp90.","definition_xrefs":["GOC:tb","PMID:11146632","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp90 protein regulator activity (obsolete GO:0010545)","synonyms":[{"name":"Hsp90 protein regulator activity","type":"exact"}],"termid":"GO:0010545"}


id: PATO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000721 absolute yield value (obsolete PATO:0000721)","termid":"PATO:0000721"}


id: PBO:0070682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 53","termid":"PBO:0070682"}


id: PBO:0027835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_septum_disassembly","termid":"PBO:0027835"}


id: MONDO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cholera (obsolete MONDO:0002024)","termid":"MONDO:0002024","xrefs":{"Monarch":{"xref_id":"0002024"}}}


id: GO:1904103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in gastrulation.","definition_xrefs":["PMID:24892953","GO_REF:0000058","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"}


id: GO:0050997
data:
  {"annotated_genes":["SJAG_00706","SJAG_03985","SJAG_02464","SJAG_02734","SJAG_04842","SJAG_03743","SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031210"},{"annotations":[96773,88025,111285,112702,109586,96774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030976"}]},"cv_name":"molecular_function","definition":"Binding to a quaternary ammonium group, including glycine betaine, choline, carnitine and proline. A quaternary ammonium group is any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_00946":null,"SJAG_02464":null,"SJAG_02734":null,"SJAG_03743":null,"SJAG_03985":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"quaternary ammonium group binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"quaternary amine binding","type":"exact"}],"termid":"GO:0050997","terms_by_termid":{"GO:0030976":null,"GO:0031210":null}}


id: FYPO:0005946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell cycle-regulated mRNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Cell cycle-regulated mRNAs are transcribed from genes whose level of transcription varies depending on cell cycle phase.","definition_xrefs":["PMID:15195092","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of cell cycle regulated gene mRNA during vegetative growth","synonyms":[{"name":"decreased cell cycle regulated gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of cell cycle regulated gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of cell cycle regulated gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of cell cycle regulated gene transcripts during vegetative growth","type":"exact"},{"name":"decreased level of cell cycle-regulated gene mRNA during vegetative growth","type":"exact"},{"name":"reduced level of cell cycle regulated gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005946"}


id: GO:0015431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + glutathione S-conjugate(in) -> ADP + phosphate + glutathione S-conjugate(out).","definition_xrefs":["GOC:jl","PMID:1455517","RHEA:19121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type glutathione S-conjugate transporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-358","GO:0071997","EC:7.6.2.3"],"synonyms":[{"name":"ATP-dependent glutathione S-conjugate export pump","type":"exact"},{"name":"ATPase-coupled glutathione S-conjugate transmembrane transporter activity","type":"related"},{"name":"GS-X pump","type":"exact"},{"name":"MRP1/GS-X pump","type":"exact"},{"name":"conjugate transporter activity","type":"broad"},{"name":"glutathione S-conjugate-exporting ATPase activity","type":"narrow"},{"name":"glutathione S-conjugate-transporting ATPase activity","type":"related"}],"termid":"GO:0015431"}


id: PBO:0056475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated tyrosine carboxypeptidase 1","termid":"PBO:0056475"}


id: MOD:00756
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to 4-hydroxy-D-valine.","definition_xrefs":["PubMed:15853325","RESID:AA0388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-D-valine","synonyms":[{"name":"(2R,3Xi)-2-amino-4-hydroxy-3-methylbutanoic acid","type":"exact"},{"name":"4-hydroxy-D-valine","type":"exact"},{"name":"D-4HyVal","type":"exact"},{"name":"D-gamma-hydroxyvaline","type":"exact"},{"name":"MOD_RES D-4-hydroxyvaline","type":"exact"}],"termid":"MOD:00756"}


id: MONDO:0968982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammation with episodic fever and immune dysregulation","secondary_identifiers":["OMIM:620795"],"termid":"MONDO:0968982","xrefs":{"Monarch":{"xref_id":"0968982"}}}


id: PBO:0016941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM254 ortholog","termid":"PBO:0016941"}


id: FYPO:0002928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of normal (i.e. indistinguishable from wild type) length.","definition_xrefs":["PomBase:mah","PMID:24081329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal poly(A) tail length","synonyms":[{"name":"normal polyA sequence length","type":"exact"},{"name":"normal polyA tail length","type":"exact"}],"termid":"FYPO:0002928"}


id: PBO:0028855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_glucose_starvation","termid":"PBO:0028855"}


id: PBO:0041208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BZW1 antisense RNA 1","termid":"PBO:0041208"}


id: GO:0140904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a cytoophidium. Cytoophidia are mesoscale, intracellular, filamentous structures that contain metabolic enzymes.","definition_xrefs":["PMID:27362644","PMID:25223282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoophidium organization","termid":"GO:0140904"}


id: PBO:0091320
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate KM, ATP KM 1.9 mM","termid":"PBO:0091320"}


id: GO:1904278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of wax biosynthetic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24692420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"regulation of wax biosynthetic process","termid":"GO:1904276"},{"relation_name":"positively_regulates","term_name":"wax biosynthetic process","termid":"GO:0010025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of wax biosynthetic process","synonyms":[{"name":"activation of wax anabolism","type":"narrow"},{"name":"activation of wax biosynthesis","type":"narrow"},{"name":"activation of wax biosynthetic process","type":"narrow"},{"name":"activation of wax formation","type":"narrow"},{"name":"activation of wax synthesis","type":"narrow"},{"name":"positive regulation of wax anabolism","type":"exact"},{"name":"positive regulation of wax biosynthesis","type":"exact"},{"name":"positive regulation of wax formation","type":"exact"},{"name":"positive regulation of wax synthesis","type":"exact"},{"name":"up regulation of wax anabolism","type":"exact"},{"name":"up regulation of wax biosynthesis","type":"exact"},{"name":"up regulation of wax biosynthetic process","type":"exact"},{"name":"up regulation of wax formation","type":"exact"},{"name":"up regulation of wax synthesis","type":"exact"},{"name":"up-regulation of wax anabolism","type":"exact"},{"name":"up-regulation of wax biosynthesis","type":"exact"},{"name":"up-regulation of wax biosynthetic process","type":"exact"},{"name":"up-regulation of wax formation","type":"exact"},{"name":"up-regulation of wax synthesis","type":"exact"},{"name":"upregulation of wax anabolism","type":"exact"},{"name":"upregulation of wax biosynthesis","type":"exact"},{"name":"upregulation of wax biosynthetic process","type":"exact"},{"name":"upregulation of wax formation","type":"exact"},{"name":"upregulation of wax synthesis","type":"exact"}],"termid":"GO:1904278"}


id: PBO:0058092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4308","termid":"PBO:0058092"}


id: PBO:0054271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1657","termid":"PBO:0054271"}


id: GO:0075135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a calcium signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host calcium-mediated signal transduction","synonyms":[{"name":"disruption of host calcium or calmodulin-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"related"},{"name":"negative regulation by symbiont of host calcium or calmodulin-mediated signal transduction","type":"related"},{"name":"suppression by symbiont of host calcium or calmodulin-mediated signal transduction","type":"related"},{"name":"symbiont-mediated suppression of host calcium or calmodulin-mediated signal transduction","type":"related"}],"termid":"GO:0075135"}


id: PBO:0035741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_neddylation_during_vegetative_growth","termid":"PBO:0035741"}


id: MONDO:0017750
data:
  {"annotated_genes":["SJAG_01071","SJAG_03158","SJAG_03054","SJAG_02211","SJAG_00578","SJAG_00041"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012637"},{"annotations":[85719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013281"},{"annotations":[86560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013325"},{"annotations":[85984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013810"},{"annotations":[86465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012635"},{"annotations":[86414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054559"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00578":null,"SJAG_01071":null,"SJAG_02211":null,"SJAG_03054":null,"SJAG_03158":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"defect in conserved oligomeric Golgi complex","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:309568","UMLS:C5679953","MEDGEN:1843352","GARD:21344"],"synonyms":[{"name":"defect in COG complex","type":"exact"}],"termid":"MONDO:0017750","terms_by_termid":{"MONDO:0012635":null,"MONDO:0012637":null,"MONDO:0013281":null,"MONDO:0013325":null,"MONDO:0013810":null,"MONDO:0054559":null},"xrefs":{"Monarch":{"xref_id":"0017750"}}}


id: MONDO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the cervix. Clinical manifestations include mucopurulent vaginal discharge and burning sensation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervicitis","termid":"MONDO:0002345"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute cervicitis","secondary_identifiers":["DOID:10616","icd11.foundation:411422080","SCTID:19272000","MEDGEN:124346","NCIT:C27056","UMLS:C0269061"],"synonyms":[{"name":"acute cervicitis (disease)","type":"exact"},{"name":"cervicitis (disease), acute","type":"exact"}],"termid":"MONDO:0001081","xrefs":{"Monarch":{"xref_id":"0001081"}}}


id: SO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that is generated by backsplicing of exons or introns, resulting in a covalently closed loop without a 5’ cap or 3’ polyA tail.","definition_xrefs":["PMID:29086764","PMID:29576969","PMID:29182528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_mRNA","synonyms":[{"name":"circular mRNA","type":"exact"},{"name":"coding circRNA","type":"exact"}],"termid":"SO:0002292"}


id: GO:1990108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a linear polymer of ubiquitin, formed by the amino-terminal methionine (M1) of one ubiquitin molecule and by the carboxy-terminal glycine (G76) of the next, is removed from a protein.","definition_xrefs":["PMID:23708998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein linear deubiquitination","termid":"GO:1990108"}


id: GO:0044272
data:
  {"annotated_genes":["SJAG_03671","SJAG_01139","SJAG_01404","SJAG_03313","SJAG_02158","SJAG_00832","SJAG_00427","SJAG_03494","SJAG_00866","SJAG_03362","SJAG_00881","SJAG_03553","SJAG_01466","SJAG_02406","SJAG_03152","SJAG_03310","SJAG_04288","SJAG_03856","SJAG_02689","SJAG_02972","SJAG_01402","SJAG_04953","SJAG_03198","SJAG_01880","SJAG_03659","SJAG_04042","SJAG_01935","SJAG_03881","SJAG_04866","SJAG_04067","SJAG_00827","SJAG_05277","SJAG_00582","SJAG_00419","SJAG_00283","SJAG_00982","SJAG_00234","SJAG_02599","SJAG_04459","SJAG_03712","SJAG_00381","SJAG_04305","SJAG_03290","SJAG_03614","SJAG_02420","SJAG_02290","SJAG_02421","SJAG_03064","SJAG_04007","SJAG_03538","SJAG_02293","SJAG_02741","SJAG_02006","SJAG_01351","SJAG_01970","SJAG_00988","SJAG_04425","SJAG_03731","SJAG_04282","SJAG_00673","SJAG_00309","SJAG_00395","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64976,109957,110540,64977,105459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[97882,92759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[115540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[116493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[117894,94507,113680,108052,86944,87369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[75768,113543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[91731,110054,116494,114282,88888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[101380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[108916,94996,96391,101381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[109958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019343"},{"annotations":[110988,103111,110987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[107894,92812,96517,117615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[109959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[100162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[113376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[99496,95067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[98517,100148,111874,92166,106473,89287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[112131,96669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[106939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[97862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[115228,111419,102220,110542,89536,96143,98030,97912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[88551,113123],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[98532],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[102877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006556"},{"annotations":[99023,113036,106843,113449,93798,115464,113030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[113031,115465,99024,113450,113037,93799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[109901,109900,99026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[106844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052837"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"biosynthetic 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compound biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"sulfur biosynthesis","type":"narrow"},{"name":"sulfur biosynthetic process","type":"narrow"},{"name":"sulfur compound anabolism","type":"exact"},{"name":"sulfur compound biosynthesis","type":"exact"},{"name":"sulfur compound formation","type":"exact"},{"name":"sulfur compound synthesis","type":"exact"}],"termid":"GO:0044272","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0006535":null,"GO:0006556":null,"GO:0006750":null,"GO:0009086":null,"GO:0009102":null,"GO:0009107":null,"GO:0009228":null,"GO:0009229":null,"GO:0010510":null,"GO:0015937":null,"GO:0019279":null,"GO:0019280":null,"GO:0019343":null,"GO:0019344":null,"GO:0019427":null,"GO:0019509":null,"GO:0035338":null,"GO:0036172":null,"GO:0052699":null,"GO:0052837":null,"GO:0071266":null,"GO:0071269":null,"GO:0090180":null,"GO:1990181":null,"GO:1990355":null,"GO:2001295":null}}


id: PBO:0043653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8 pseudogene 3","termid":"PBO:0043653"}


id: PBO:0084557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane anchor subunit of succinate dehydrogenase (SDH); involved in coupling the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; has similarity to human SDH subunit D (SDHD), which is implicated in paraganglioma","termid":"PBO:0084557"}


id: FYPO:0003054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region such as the omt3 locus on chromosome 1 or the sme2 locus on chromosome 2.","definition_xrefs":["PMID:23117617","PomBase:mah","PMID:22582262","PMID:24173580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing","termid":"FYPO:0003025"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003054"}


id: FYPO:0000453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of DNA in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered DNA level during vegetative growth","termid":"FYPO:0004321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"DNA content decreased during vegetative growth","synonyms":[{"name":"DNA content decreased during mitotic cell cycle","type":"related"},{"name":"DNA content reduced during vegetative growth","type":"exact"},{"name":"decreased DNA content during vegetative growth","type":"exact"},{"name":"decreased DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0000453"}


id: GO:0050146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleotide + a 2'-deoxynucleoside = a nucleoside + a 2'-deoxynucleoside 5'-monophosphate.","definition_xrefs":["EC:2.7.1.77","MetaCyc:NUCLEOSIDE-PHOSPHOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"nucleoside phosphotransferase activity","secondary_identifiers":["Reactome:R-HSA-2162066","Reactome:R-HSA-9754916","RHEA:19961"],"synonyms":[{"name":"nonspecific nucleoside phosphotransferase activity","type":"related"},{"name":"nucleotide:2'-nucleoside 5'-phosphotransferase activity","type":"related"},{"name":"nucleotide:3'-deoxynucleoside 5'-phosphotransferase activity","type":"related"},{"name":"nucleotide:nucleoside 5'-phosphotransferase activity","type":"related"}],"termid":"GO:0050146"}


id: GO:0070162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of adiponectin, a protein hormone, by adipose tissue.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"adiponectin secretion","termid":"GO:0070162"}


id: GO:1901759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-L-Ara4N-lipid A.","definition_xrefs":["GOC:yaf","PMID:19166326","GOC:TermGenie","PMID:17928292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-L-Ara4N-lipid A metabolic process","synonyms":[{"name":"4-amino-4-deoxy-beta-L-arabinose-lipid A metabolic process","type":"exact"},{"name":"4-amino-4-deoxy-beta-L-arabinose-lipid A metabolism","type":"exact"},{"name":"beta-L-Ara4N-lipid A metabolism","type":"exact"}],"termid":"GO:1901759"}


id: PBO:0058206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4499","termid":"PBO:0058206"}


id: MONDO:0010175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van Bogaert-Hozay syndrome","secondary_identifiers":["OMIM:277150","UMLS:C1848598","MESH:C536526","MEDGEN:341263"],"synonyms":[{"name":"A familial form of acro-osteolysis associated with a mild intellectual disability, skin atrophy, facial dysmorphism, and ocular defects","type":"related"},{"name":"A familial form of acro-osteolysis associated with a mild mental retardation, skin atrophy, facial dysmorphism, and ocular defects","type":"related"},{"name":"Hozay's syndrome","type":"related"},{"name":"Hozay’s syndrome","type":"related"},{"name":"acro-osteolysis-facial dysplasia syndrome","type":"related"},{"name":"van Bogaert-Hozay syndrome","type":"exact"}],"termid":"MONDO:0010175","xrefs":{"Monarch":{"xref_id":"0010175"}}}


id: GO:0046804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-protein cross-link between peptidyl-threonine and peptidyl-cysteine by the synthesis of (2S,3S,4Xi,6R)-3-methyl-lanthionine sulfoxide (3-methyl-L-lanthionine sulfoxide), as found in the antibiotic actagardine.","definition_xrefs":["RESID:AA0330"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via (2S,3S,4Xi,6R)-3-methyl-lanthionine sulfoxide (obsolete GO:0046804)","synonyms":[{"name":"peptide cross-linking via (2S,3S,4Xi,6R)-3-methyl-lanthionine sulphoxide","type":"exact"}],"termid":"GO:0046804"}


id: PBO:0068717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 6, pseudogene","termid":"PBO:0068717"}


id: SO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The junction where an insertion occurred.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_site","synonyms":[{"name":"insertion site","type":"exact"}],"termid":"SO:0000366"}


id: PBO:0002246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase (predicted)","termid":"PBO:0002246"}


id: PBO:0038567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein 1","termid":"PBO:0038567"}


id: GO:0120017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a ceramide from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:25797198","GOC:krc","PMID:20823909","PMID:24220498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid transfer activity","termid":"GO:0120016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ceramide transfer activity","secondary_identifiers":["GO:0035620"],"synonyms":[{"name":"ceramide carrier activity","type":"exact"},{"name":"ceramide transporter activity","type":"broad"},{"name":"intermembrane ceramide transfer activity","type":"narrow"}],"termid":"GO:0120017"}


id: PBO:0004443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse4","termid":"PBO:0004443"}


id: PBO:0000495
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates genes involved in vesicle mediated transport","termid":"PBO:0000495"}


id: PBO:0030651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_nitrogen_starvation","termid":"PBO:0030651"}


id: PBO:0012234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chalcone related protein family","termid":"PBO:0012234"}


id: PBO:0061527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSL1 component of MIS12 kinetochore complex","termid":"PBO:0061527"}


id: PBO:0048454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain containing 1","termid":"PBO:0048454"}


id: PBO:0084502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for prospore membrane morphogenesis; required for the proper shape of the prospore membrane (PSM) and for spore wall formation; functions cooperatively with SPO71 in PSM elongation; physically interacts with Spo71p; genetically antagonistic to SPO1, similar to SPO71; localizes to the PSM; required for spore wall formation during sporulation; dispensable for both nuclear divisions during meiosis; dysferlin domain-only protein","termid":"PBO:0084502"}


id: GO:0140704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3',2' cyclic GMP-AMP (cGAMP) nucleotide, a cyclic purine dinucleotide that consists of AMP and GMP units cyclized via 3',5' and 2',5' linkages.","definition_xrefs":["PMID:34261127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"3',2'-cyclic GMP-AMP binding","synonyms":[{"name":"3',2' cyclic-GMP-AMP binding","type":"exact"},{"name":"3',2'-cGAMP binding","type":"exact"},{"name":"3',2'-cyclic GAMP binding","type":"exact"}],"termid":"GO:0140704"}


id: GO:0034434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A lipid modification process in which a sterol ester is formed by the combination of a carboxylic acid (often a fatty acid) and a sterol molecule (e.g. cholesterol).","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah","GOC:pde"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol esterification (obsolete GO:0034434)","termid":"GO:0034434"}


id: MONDO:0014602
data:
  {"annotated_genes":["SJAG_03681","SJAG_03353"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84803,84804],"is_not":false,"summary":null,"term":"MONDO:0014602"}]},"cv_name":"mondo","definition":"An autosomal dominant intellectual developmental disorder that has material basis in an autosomal dominant mutation of the PPP2R5D gene on chromosome 6p21.1.","definition_xrefs":["DOID:0070065"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"},{"relation_name":"is_a","term_name":"Houge-Janssens syndrome","termid":"MONDO:0957553"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03353":null,"SJAG_03681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"Hogue-Janssens syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17802","UMLS:C5779996","OMIM:616355","MEDGEN:1830493","Orphanet:457279"],"synonyms":[{"name":"MRD35","type":"exact"},{"name":"autosomal dominant intellectual disability 35","type":"exact"},{"name":"autosomal dominant mental retardation 35","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 35","type":"related"},{"name":"intellectual disability, autosomal dominant 35","type":"related"},{"name":"intellectual disability, autosomal dominant type 35","type":"exact"},{"name":"intellectual disability-macrocephaly-hypotonia-behavioral abnormalities syndrome","type":"exact"},{"name":"mental retardation, autosomal dominant 35","type":"related"},{"name":"mental retardation, autosomal dominant type 35","type":"exact"}],"termid":"MONDO:0014602","terms_by_termid":{"MONDO:0014602":null},"xrefs":{"Monarch":{"xref_id":"0014602"}}}


id: GO:0061746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate; this reaction requires the presence of single-stranded DNA, and it drives another reaction.","definition_xrefs":["GOC:dph","PMID:26277776"],"gene_count":0,"genotype_count":0,"name":"obsolete single-stranded DNA-dependent GTPase activity (obsolete GO:0061746)","termid":"GO:0061746"}


id: GO:0071377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucagon stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucagon","termid":"GO:0033762"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucagon stimulus","secondary_identifiers":["Reactome:R-HSA-163359"],"termid":"GO:0071377"}


id: MONDO:0033310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 31","secondary_identifiers":["GARD:16251","UMLS:C4540355","OMIM:617761","MEDGEN:1618082","DOID:0080277"],"synonyms":[{"name":"JBTS31","type":"related"},{"name":"Joubert syndrome 31","type":"exact"}],"termid":"MONDO:0033310","xrefs":{"Monarch":{"xref_id":"0033310"}}}


id: PBO:0110813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, phosphate starvation genes Pho7","termid":"PBO:0110813"}


id: PR:Q9USR6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetyltransferase 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02576","PRO:DNx","PANTHER:PTHR13256:SF10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 9-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.03c","secondary_identifiers":["UniProtKB:Q9USR6"],"synonyms":[{"name":"Spom972h-NAT9","type":"exact"}],"termid":"PR:Q9USR6"}


id: PBO:0055446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2877","termid":"PBO:0055446"}


id: RO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has output c iff c is a participant in p, c is present at the end of p, and c is not present at the beginning of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output","termid":"RO:0002234"}


id: GO:0043157
data:
  {"annotated_genes":["SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cation stress, an increase or decrease in the concentration of positively charged ions in the environment.","definition_xrefs":["GOC:jl","PMID:14762213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cation stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043157","terms_by_termid":{"GO:0071473":null}}


id: PBO:0049302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 3 pseudogene 2","termid":"PBO:0049302"}


id: GO:0048482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ovule are generated and organized. The ovule is the structure in seed plants enclosing the female gametophyte, and is composed of the nucellus, one or two integuments, and the funiculus; it develops into the seed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"carpel morphogenesis","termid":"GO:0048445"},{"relation_name":"part_of","term_name":"plant ovule development","termid":"GO:0048481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant ovule morphogenesis","termid":"GO:0048482"}


id: PBO:0030097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_binding","termid":"PBO:0030097"}


id: PBO:0015216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, ubiquitin-protein ligase E3","termid":"PBO:0015216"}


id: GO:0080178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the addition of a 5-carbamoylmethyl group to a uridine residue in RNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"5-carbamoylmethyl uridine residue modification","synonyms":[{"name":"5-carbamoylmethyluridine metabolic process","type":"related"}],"termid":"GO:0080178"}


id: GO:0006302
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  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repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA 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break repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693532"],"termid":"GO:0006302","terms_by_termid":{"GO:0000706":null,"GO:0000707":null,"GO:0000724":null,"GO:0000727":null,"GO:0000729":null,"GO:0000730":null,"GO:0000736":null,"GO:0006302":null,"GO:0006303":null,"GO:0010569":null,"GO:0010772":null,"GO:0045002":null,"GO:0045003":null,"GO:0061674":null,"GO:0097552":null,"GO:0097680":null,"GO:1902346":null,"GO:1990414":null,"GO:1990918":null,"GO:2000779":null,"GO:2000781":null,"GO:2001033":null,"GO:2001034":null}}


id: MONDO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-lymphoblastic leukemia/lymphoma with recurrent genetic abnormality","termid":"MONDO:0035605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with t(12;21)(p13.2;q22.1)","secondary_identifiers":["Orphanet:585929","NCIT:C80334","GARD:22344"],"synonyms":[{"name":"B lymphoblastic leukaemia lymphoma with t(12;21)(p13;q22); TEL-AML1","type":"exact"},{"name":"B lymphoblastic leukemia lymphoma with t(12;21)(p13;q22); TEL-AML1","type":"exact"},{"name":"B-lymphoblastic leukemia/lymphoma with t(12;21)(p13.2;q22.1); ETV6-RUNX1","type":"exact"}],"termid":"MONDO:0035942","xrefs":{"Monarch":{"xref_id":"0035942"}}}


id: PBO:0035789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing_at_highly_transcribed_RNA_polymerase_II_genes","termid":"PBO:0035789"}


id: GO:2001271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cysteine-type endopeptidase activity involved in execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis (obsolete GO:2001271)","synonyms":[{"name":"negative regulation of effector caspase activity","type":"narrow"}],"termid":"GO:2001271"}


id: PBO:0031142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lagging_mitotic_chromosomes","termid":"PBO:0031142"}


id: MONDO:0019180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of angiogenesis leading to arteriovenous dilatations: cutaneo-mucosal hemorrhagic telangiectasias and visceral shunting.","definition_xrefs":["Orphanet:774"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"telangiectasis","termid":"MONDO:0001576"},{"relation_name":"is_a","term_name":"capillary malformation","termid":"MONDO:0016231"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"hereditary hemorrhagic telangiectasia","secondary_identifiers":["icd11.foundation:714406192","NANDO:1200744","UMLS:C0039445","OMIMPS:187300","ICD10CM:I78.0","MEDGEN:52657","NCIT:C35064","NANDO:2100296","MESH:D013683","SCTID:21877004","ICD9:448.0","GARD:6626","NORD:1229","MedDRA:10019883","DOID:1270","NANDO:2201034"],"synonyms":[{"name":"HHT","type":"exact"},{"name":"Osler hemorrhagic telangiectasia syndrome","type":"exact"},{"name":"Osler-Weber-Rendu disease","type":"exact"},{"name":"Rendu-Osler disease","type":"exact"},{"name":"Rendu-Osler-Weber disease","type":"exact"},{"name":"hereditary hemorrhagic telangiectasia","type":"exact"},{"name":"telangiectasia, hereditary Hemorrahagic, of Rendu, Osler","type":"exact"},{"name":"telangiectasia, hereditary hemorrhagic","type":"exact"}],"termid":"MONDO:0019180","xrefs":{"Monarch":{"xref_id":"0019180"}}}


id: PBO:0040996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 1","termid":"PBO:0040996"}


id: GO:0021665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 5. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dgh","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 5 morphogenesis","termid":"GO:0021664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 structural organization","synonyms":[{"name":"rhombomere 5 structural organisation","type":"exact"}],"termid":"GO:0021665"}


id: PATO:0001353
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density quality which inheres in a bearer by virtue of some influence exerted by the bearer's mass on a given volume.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Mass_density"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"volumetric density","termid":"PATO:0001353"}


id: MOD:01866
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6-amino hydrogen atom of a lysine residue with the Applied Biosystems mTRAQ light reporter+balance group.","definition_xrefs":["Unimod:888#K","OMSSA:209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mTRAQ light reporter+balance reagent acylated residue","termid":"MOD:01864"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"mTRAQ light reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"mTRAQ light","type":"related"},{"name":"mTRAQ light on K","type":"exact"}],"termid":"MOD:01866"}


id: GO:1903127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of centriole-centriole cohesion.","definition_xrefs":["GO_REF:0000058","PMID:24554434","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"positive regulation of centriole-centriole cohesion","synonyms":[{"name":"activation of centriole-centriole cohesion","type":"narrow"},{"name":"up regulation of centriole-centriole cohesion","type":"exact"},{"name":"up-regulation of centriole-centriole cohesion","type":"exact"},{"name":"upregulation of centriole-centriole cohesion","type":"exact"}],"termid":"GO:1903127"}


id: PBO:0056513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscleblind like splicing regulator 2","termid":"PBO:0056513"}


id: PBO:0072343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 29","termid":"PBO:0072343"}


id: PBO:0038973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A2b receptor pseudogene 1","termid":"PBO:0038973"}


id: MONDO:0032921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, neonatal respiratory insufficiency, and thermodysregulation","secondary_identifiers":["OMIM:618797","UMLS:C5394091","MEDGEN:1716098"],"synonyms":[{"name":"NEDHRIT","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, NEONATAL RESPIRATORY INSUFFICIENCY, AND THERMODYSREGULATION","type":"related"}],"termid":"MONDO:0032921","xrefs":{"Monarch":{"xref_id":"0032921"}}}


id: PBO:0005693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin (predicted)","termid":"PBO:0005693"}


id: PBO:0004658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Tma20 (predicted)","termid":"PBO:0004658"}


id: GO:0140412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: zinc(out) + HCO3-(out) = zinc(in) + HCO3-(in).","definition_xrefs":["PMID:27166256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"monoatomic cation:bicarbonate symporter activity","termid":"GO:0140410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"zinc:bicarbonate symporter activity","synonyms":[{"name":"zinc:hydrogencarbonate symporter activity","type":"exact"}],"termid":"GO:0140412"}


id: PBO:0076555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tax1 binding protein 3","termid":"PBO:0076555"}


id: GO:1905393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the plant organ. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:TermGenie","GO_REF:0000081","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant organ formation","termid":"GO:1905393"}


id: PBO:0060664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicastrin pseudogene 1","termid":"PBO:0060664"}


id: GO:0036492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a phosphate group on to the translation initiation factor eIF2alpha, as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","PMID:16835242","PMID:14676213","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation by eIF2 alpha phosphorylation","termid":"GO:0010998"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"eiF2alpha phosphorylation in response to endoplasmic reticulum stress","synonyms":[{"name":"eiF2alpha phosphorylation in response to ER stress","type":"exact"},{"name":"regulation of translation initiation by eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0036492"}


id: GO:0070771
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell surface antigen CD47 and the kinase c-Src.","definition_xrefs":["PMID:9169439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CD47-Src complex","synonyms":[{"name":"ITGA2b-ITGB3-CD47-SRC complex","type":"narrow"}],"termid":"GO:0070771"}


id: MONDO:0005567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A substance-specific organic brain syndrome that follows the discontinuation of administration or use, or reduction in intake of a substance (including alcohol, prescribed medications and recreational drugs). Syndrome manifests with diverse, often painful physical and psychological symptoms, which include but not limited to intense drug craving, anxiety, depression, insomnia, nausea, perspiration, body aches, tremors, hallucinations, and convulsions.","definition_xrefs":["NCIT:C35046"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"substance-related disorder","termid":"MONDO:0002494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substance withdrawal syndrome","secondary_identifiers":["MESH:D013375","UMLS:C0038587","ICD9:292.0","MEDGEN:20990","SCTID:363101005","DOID:0060001","EFO:0005800"],"synonyms":[{"name":"drug withdrawal","type":"exact"},{"name":"drug withdrawal syndrome","type":"exact"},{"name":"substance withdrawal","type":"exact"},{"name":"substance withdrawal disorder","type":"exact"},{"name":"substance withdrawal syndrome","type":"exact"},{"name":"withdrawal disorder","type":"related"},{"name":"withdrawal syndrome","type":"exact"}],"termid":"MONDO:0005567","xrefs":{"Monarch":{"xref_id":"0005567"}}}


id: PBO:0044059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin D","termid":"PBO:0044059"}


id: PBO:0030931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyruvate_dehydrogenase_activity","termid":"PBO:0030931"}


id: PBO:0045577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase","termid":"PBO:0045577"}


id: GO:0009685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"gibberellin metabolic process","synonyms":[{"name":"gibberellic acid metabolic process","type":"narrow"},{"name":"gibberellic acid metabolism","type":"narrow"},{"name":"gibberellin metabolism","type":"exact"}],"termid":"GO:0009685"}


id: PBO:0074714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 75","termid":"PBO:0074714"}


id: MONDO:0012878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Cowden disease in which the cause of the disease is a mutation in the SDHB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"Cowden syndrome 2","secondary_identifiers":["MESH:C567337","OMIM:612359"],"synonyms":[{"name":"CWS2","type":"related"},{"name":"Cowden disease caused by mutation in SDHB","type":"exact"},{"name":"Cowden syndrome 2","type":"exact"},{"name":"Cowden syndrome type 2","type":"exact"},{"name":"SDHB Cowden disease","type":"exact"}],"termid":"MONDO:0012878","xrefs":{"Monarch":{"xref_id":"0012878"}}}


id: PBO:0054414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1810","termid":"PBO:0054414"}


id: GO:0050942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pigment cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"positively_regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pigment cell differentiation","synonyms":[{"name":"activation of pigment cell differentiation","type":"narrow"},{"name":"stimulation of pigment cell differentiation","type":"narrow"},{"name":"up regulation of pigment cell differentiation","type":"exact"},{"name":"up-regulation of pigment cell differentiation","type":"exact"},{"name":"upregulation of pigment cell differentiation","type":"exact"}],"termid":"GO:0050942"}


id: MONDO:0007794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypogonadotropic hypogonadism that has material basis in homozygous or compound heterozygous mutation in the GNRHR gene on chromosome 4q13, sometimes in association with mutation in another gene. No patients with anosmia have been reported.","definition_xrefs":["PMID:9371856","DOID:0090078","PMID:17235395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 7 with or without anosmia","secondary_identifiers":["SCTID:123953004","OMIM:146110","GARD:2897","ICD10CM:E23.0","ICD9:253.4","UMLS:C0342384","MEDGEN:87440","NANDO:1200382"],"synonyms":[{"name":"HH7","type":"related"},{"name":"hypogonadism, isolated hypogonadotropic","type":"related"},{"name":"hypogonadotropic hypogonadism 7 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism 7 without anosmia","type":"exact"},{"name":"idiopathic hypogonadotropic hypogonadism","type":"related"}],"termid":"MONDO:0007794","xrefs":{"Monarch":{"xref_id":"0007794"}}}


id: MONDO:0002406
data:
  {"annotated_genes":["SJAG_04109","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[86060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"An inflammatory process affecting the skin. Signs include red rash, itching, and blister formation. Representative examples are contact dermatitis, atopic dermatitis, and seborrheic dermatitis.","definition_xrefs":["NCIT:C2983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03850":null,"SJAG_04109":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatitis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:692.9","DOID:2723","MEDGEN:849741","MESH:D003872","SCTID:43116000","UMLS:C3875321"],"synonyms":[{"name":"inflammation of skin","type":"exact"},{"name":"inflammation of the skin","type":"exact"},{"name":"inflammation of zone of skin","type":"exact"},{"name":"inflammatory skin disease","type":"exact"},{"name":"skin inflammation","type":"exact"},{"name":"zone of skin inflammation","type":"exact"}],"termid":"MONDO:0002406","terms_by_termid":{"MONDO:0008218":null,"MONDO:0008296":null},"xrefs":{"Monarch":{"xref_id":"0002406"}}}


id: PBO:0055651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3091","termid":"PBO:0055651"}


id: MONDO:0008089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutropenia, chronic familial","secondary_identifiers":["MESH:C535815","ICD9:288.09","SCTID:234576008","UMLS:C3665676","OMIM:162700","MEDGEN:777137"],"synonyms":[{"name":"chronic familial neutropenia","type":"related"},{"name":"leukopenia benign familial","type":"related"},{"name":"leukopenia, benign familial","type":"related"},{"name":"neutropenia chronic familial","type":"related"},{"name":"neutropenia, chronic familial","type":"exact"}],"termid":"MONDO:0008089","xrefs":{"Monarch":{"xref_id":"0008089"}}}


id: MONDO:0015545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complication of rheumatic disease that is caused by excessive activation and uncontrolled proliferation of T lymphocytes and well-differentiated macrophages. It is characterized by fever, pancytopenia, liver insufficiency, coagulopathy and neurologic symptoms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"secondary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"macrophage activation syndrome","secondary_identifiers":["EFO:1001806","SCTID:430478003","Orphanet:158061","MedDRA:10053867","GARD:12124","UMLS:C1096155","MESH:D055501","NCIT:C114471","MEDGEN:242753"],"synonyms":[{"name":"MAS","type":"exact"},{"name":"reactive hemophagocytic lymphohistiocytosis","type":"exact"}],"termid":"MONDO:0015545","xrefs":{"Monarch":{"xref_id":"0015545"}}}


id: MONDO:0008468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloarthropathy, susceptibility to","termid":"MONDO:0024512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondyloarthropathy, susceptibility to, 2","secondary_identifiers":["UMLS:C1866738","OMIM:183840","DOID:0080604","MEDGEN:355791"],"synonyms":[{"name":"SPDA2","type":"related"},{"name":"spondyloarthropathy, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0008468","xrefs":{"Monarch":{"xref_id":"0008468"}}}


id: CHEBI:16526
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon dioxide","termid":"CHEBI:16526"}


id: PBO:0051674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 4","termid":"PBO:0051674"}


id: GO:0160158
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that catalyzes the oxidative decarboxylation of branched-chain alpha-keto acids derived from L-leucine, L-isoleucine, and L-valine to branched-chain acyl-CoAs. It is composed of four polypeptides, E1alpha, E1beta, E2, and E3.","definition_xrefs":["PMID:10464218"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic branched-chain alpha-keto acid dehydrogenase complex (obsolete GO:0160158)","synonyms":[{"name":"BKDH complex","type":"exact"}],"termid":"GO:0160158"}


id: PBO:0050415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 4","termid":"PBO:0050415"}


id: GO:1902810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle fiber differentiation.","definition_xrefs":["PMID:17879321","GO_REF:0000058","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myotube differentiation","termid":"GO:0010832"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle fiber differentiation","termid":"GO:1902809"},{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle cell differentiation","termid":"GO:2001015"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle fiber differentiation","termid":"GO:0098528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle fiber differentiation","synonyms":[{"name":"down regulation of skeletal muscle fiber differentiation","type":"exact"},{"name":"down-regulation of skeletal muscle fiber differentiation","type":"exact"},{"name":"downregulation of skeletal muscle fiber differentiation","type":"exact"},{"name":"inhibition of skeletal muscle fiber differentiation","type":"narrow"}],"termid":"GO:1902810"}


id: PBO:0063375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCYT1B antisense RNA 1","termid":"PBO:0063375"}


id: PBO:0040489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7 like 3B","termid":"PBO:0040489"}


id: PBO:0091428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amt3","termid":"PBO:0091428"}


id: PBO:0070728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 33","termid":"PBO:0070728"}


id: GO:0003401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth that results in the elongation of a line that defines polarity or symmetry in an anatomical structure.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axis elongation","synonyms":[{"name":"elongation of an axis","type":"related"}],"termid":"GO:0003401"}


id: GO:0046032
data:
  {"annotated_genes":["SJAG_04192","SJAG_02009","SJAG_04048","SJAG_04495","SJAG_04334","SJAG_00461","SJAG_02135","SJAG_00839","SJAG_03660","SJAG_02369","SJAG_03828","SJAG_03903","SJAG_06621","SJAG_00685","SJAG_00027","SJAG_06622","SJAG_05314","SJAG_03852","SJAG_00633","SJAG_02945","SJAG_01310","SJAG_02107","SJAG_00605","SJAG_03373","SJAG_02796","SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103949,105295,104924,108850,108851,108853,97772,108384,108389,108390,108848,108852,108385,108854,115796,105294,94030,97494,102870,94517,104925,103126,108386,108388,108849,108387,104926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[103951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[88123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[97690,111027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72605,75583],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[88726],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ADP catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ADP breakdown","type":"exact"},{"name":"ADP catabolism","type":"exact"},{"name":"ADP degradation","type":"exact"}],"termid":"GO:0046032","terms_by_termid":{"GO:0006096":null,"GO:0006110":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: PBO:0074565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 19","termid":"PBO:0074565"}


id: PBO:0062237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BA member 1 pseudogene","termid":"PBO:0062237"}


id: MONDO:0008388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pili annulati is an isolated, benign hair shaft abnormality, usually presenting after the age of 2 and affecting the hair of the scalp or very rarely beard, axillary, or pubic hair, that is characterized by a banded or speckled appearance due to alternating light bands (corresponding to air-filled cavities within the cortex of the affected hair shafts) and dark bands. The bands have a lifelong duration, may only be detectable under light microscopy, are more apparent in fair-colored hair or with age-related graying, and have no effect on hair growth or fragility in the vast majority of cases.","definition_xrefs":["Orphanet:169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ringed hair disease","secondary_identifiers":["SCTID:21926007","MEDGEN:75523","GARD:4359","MESH:C537187","UMLS:C0263489","OMIM:180600"],"synonyms":[{"name":"pili annulati","type":"exact"},{"name":"ringed hair","type":"related"}],"termid":"MONDO:0008388","xrefs":{"Monarch":{"xref_id":"0008388"}}}


id: PBO:0029309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spheroid_cell","termid":"PBO:0029309"}


id: PBO:0066046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1B pseudogene 2","termid":"PBO:0066046"}


id: PBO:0048012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM and PDZ domain containing 1","termid":"PBO:0048012"}


id: PBO:0081992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 22","termid":"PBO:0081992"}


id: GO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. This reaction requires the binding of double-stranded RNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase activity","secondary_identifiers":["Reactome:R-HSA-8985104","EC:2.7.7.84","MetaCyc:RXN-13648","Reactome:R-HSA-8983680","RHEA:34407","Reactome:R-HSA-8985091"],"synonyms":[{"name":"(2-5')oligo(A) synthetase activity","type":"exact"},{"name":"2'-5' oligoadenylate synthetase activity","type":"exact"},{"name":"2-5A synthetase activity","type":"exact"},{"name":"oligo-2',5'-adenylate synthetase activity","type":"exact"}],"termid":"GO:0001730"}


id: MONDO:0022071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carbon baby syndrome, also known as universal acquired melanosis, is a rare form of hyperpigmentation. The skin of affected infants progressively darkens over the first years of life in the absence of other symptoms. The cause of the condition is unknown.","definition_xrefs":["GARD:0001089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon baby syndrome","secondary_identifiers":["SCTID:238700008","MEDGEN:98349","UMLS:C0406419"],"synonyms":[{"name":"universal acquired melanosis","type":"related"}],"termid":"MONDO:0022071","xrefs":{"Monarch":{"xref_id":"0022071"}}}


id: GO:0071677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"positively_regulates","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mononuclear cell migration","synonyms":[{"name":"activation of mononuclear cell migration","type":"narrow"},{"name":"stimulation of mononuclear cell migration","type":"narrow"},{"name":"up regulation of mononuclear cell migration","type":"exact"},{"name":"up-regulation of mononuclear cell migration","type":"exact"},{"name":"upregulation of mononuclear cell migration","type":"exact"}],"termid":"GO:0071677"}


id: PBO:0015677
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAt1 Compensation","termid":"PBO:0015677"}


id: PR:Q9USH9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized ABC transporter ATP-binding protein YjjK that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C825.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.01","secondary_identifiers":["UniProtKB:Q9USH9"],"synonyms":[{"name":"Spom972h-yjjK","type":"exact"}],"termid":"PR:Q9USH9"}


id: GO:2000277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidative phosphorylation uncoupler activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"},{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of oxidative phosphorylation uncoupler activity","synonyms":[{"name":"positive regulation of mitochondrial uncoupling protein activity","type":"related"},{"name":"positive regulation of uncoupling protein activity","type":"related"}],"termid":"GO:2000277"}


id: MONDO:0957467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary genito-urinary tuberculosis","secondary_identifiers":["Orphanet:645874"],"termid":"MONDO:0957467","xrefs":{"Monarch":{"xref_id":"0957467"}}}


id: GO:0033522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of one or more ubiquitin groups.","definition_xrefs":["GOC:bf","PMID:15509584","GOC:mah","PMID:18430235","PMID:16473935"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A ubiquitination (obsolete GO:0033522)","termid":"GO:0033522"}


id: PR:Q9USW5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps402 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USW5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.10","synonyms":[{"name":"Spom972h-rps402","type":"exact"}],"termid":"PR:Q9USW5"}


id: MONDO:0023035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eagle syndrome is characterized by recurrent pain in the middle part of the throat (oropharynx) and face. 'Classic Eagle syndrome' is typically seen in patients after throat trauma or tonsillectomy. Symptoms include dull and persistent throat pain that may radiate to the ear and worsen with rotation of the head. Other symptoms may include difficulty swallowing, feeling that there is something stuck in the throat, tinnitus, and neck or facial pain. A second form of Eagle syndrome unrelated to tonsillectomy causes compression of the vessel that carries blood to the brain, neck, and face (carotid artery). This form can cause headache. Eagle syndrome is due to a calcified stylohyoid ligament or an elongated styloid process. The styloid process is a pointed part of the temporal bone that serves as an anchor point for several muscles associated with the tongue and larynx. The mainstay treatment for Eagle syndrome is surgery to shorten the styloid process (styloidectomy). Medical management may include the use of pain and anti-inflammatory medications, antidepressants, and/or steroids. The overall success rate for treatment (medical or surgical) is about 80%.","definition_xrefs":["GARD:0009401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eagle syndrome","secondary_identifiers":["SCTID:609143007","ICD9:733.99","UMLS:C1868714","MESH:C538010","MEDGEN:357035"],"synonyms":[{"name":"Eagle's syndrome","type":"exact"},{"name":"elongated styloid process syndrome","type":"exact"},{"name":"elongated styloid process which causes cervico facial pain tinnitus and otalgia","type":"related"},{"name":"styloid-stylohoid syndrome","type":"related"}],"termid":"MONDO:0023035","xrefs":{"Monarch":{"xref_id":"0023035"}}}


id: PBO:0078603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 16","termid":"PBO:0078603"}


id: FYPO:0005212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during prometaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during mitosis","termid":"FYPO:0005779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitotic prometaphase","synonyms":[{"name":"normal protein localisation to kinetochore during mitotic prometaphase","type":"exact"},{"name":"normal protein localization to kinetochore during prometaphase of mitosis","type":"exact"}],"termid":"FYPO:0005212"}


id: MONDO:0004278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive transitional cell carcinoma of the bladder that exhibits spindle cell sarcomatoid features.","definition_xrefs":["NCIT:C39824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcomatoid transitional cell carcinoma","termid":"MONDO:0002837"},{"relation_name":"is_a","term_name":"infiltrating bladder urothelial carcinoma","termid":"MONDO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"infiltrating bladder urothelial carcinoma sarcomatoid variant","secondary_identifiers":["DOID:7553","EFO:1000303","ONCOTREE:SCB","MEDGEN:268929","UMLS:C1512743"],"synonyms":[{"name":"infiltrating bladder urothelial carcinoma sarcomatoid variant","type":"exact"},{"name":"infiltrating bladder urothelial carcinoma, sarcomatoid variant with heterologous elements","type":"narrow"},{"name":"infiltrating bladder urothelial carcinoma, sarcomatoid variant without heterologous elements","type":"narrow"},{"name":"sarcomatoid carcinoma of the urinary bladder","type":"broad"}],"termid":"MONDO:0004278","xrefs":{"Monarch":{"xref_id":"0004278"}}}


id: PBO:0082619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a complex containing Cef1p; putatively involved in pre-mRNA splicing; has similarity to S. pombe Cwf27p; protein abundance increases in response to DNA replication stress","termid":"PBO:0082619"}


id: PBO:0027607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_anaphase","termid":"PBO:0027607"}


id: PBO:0031312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell","termid":"PBO:0031312"}


id: GO:1902690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of NAD metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19846558","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"is_a","term_name":"regulation of NAD metabolic process","termid":"GO:1902688"},{"relation_name":"positively_regulates","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"positive regulation of NAD metabolic process","synonyms":[{"name":"activation of NAD (oxidized) metabolic process","type":"narrow"},{"name":"activation of NAD (oxidized) metabolism","type":"narrow"},{"name":"activation of NAD metabolic process","type":"narrow"},{"name":"activation of NAD metabolism","type":"narrow"},{"name":"activation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"activation of nicotinamide adenine dinucleotide metabolic process","type":"narrow"},{"name":"activation of nicotinamide adenine dinucleotide metabolism","type":"narrow"},{"name":"activation of oxidized NAD metabolic process","type":"narrow"},{"name":"activation of oxidized NAD metabolism","type":"narrow"},{"name":"activation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"narrow"},{"name":"activation of oxidized nicotinamide adenine dinucleotide metabolism","type":"narrow"},{"name":"positive regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"positive regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"positive regulation of NAD metabolism","type":"exact"},{"name":"positive regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"positive regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"positive regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"positive regulation of oxidized NAD metabolic process","type":"exact"},{"name":"positive regulation of oxidized NAD metabolism","type":"exact"},{"name":"positive regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"positive regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"up regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"up regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"up regulation of NAD metabolic process","type":"exact"},{"name":"up regulation of NAD metabolism","type":"exact"},{"name":"up regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"up regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"up regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"up regulation of oxidized NAD metabolic process","type":"exact"},{"name":"up regulation of oxidized NAD metabolism","type":"exact"},{"name":"up regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"up regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"up-regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"up-regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"up-regulation of NAD metabolic process","type":"exact"},{"name":"up-regulation of NAD metabolism","type":"exact"},{"name":"up-regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"up-regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"up-regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"up-regulation of oxidized NAD metabolic process","type":"exact"},{"name":"up-regulation of oxidized NAD metabolism","type":"exact"},{"name":"up-regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"up-regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"upregulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"upregulation of NAD (oxidized) metabolism","type":"exact"},{"name":"upregulation of NAD metabolic process","type":"exact"},{"name":"upregulation of NAD metabolism","type":"exact"},{"name":"upregulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"upregulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"upregulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"upregulation of oxidized NAD metabolic process","type":"exact"},{"name":"upregulation of oxidized NAD metabolism","type":"exact"},{"name":"upregulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"upregulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:1902690"}


id: PBO:0054290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1681","termid":"PBO:0054290"}


id: PBO:0067523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 666, pseudogene","termid":"PBO:0067523"}


id: PBO:0091091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex III assembly protein Cbp4","termid":"PBO:0091091"}


id: PBO:0116408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 4","termid":"PBO:0116408"}


id: FYPO:0008008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic interphase in which the duration of cytoplasmic microtubule growth events is longer.","definition_xrefs":["PMID:22363481","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal duration of microtubule growth event","termid":"FYPO:0007956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of cytoplasmic microtubule growth events during mitotic interphase","synonyms":[{"name":"longer cytoplasmic microtubule growth events during mitotic interphase","type":"narrow"},{"name":"lower cytoplasmic microtubule catastrophe during mitotic interphase","type":"narrow"},{"name":"lower cytoplasmic microtubule catastrophe rate during mitotic interphase","type":"narrow"}],"termid":"FYPO:0008008"}


id: GO:0021571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:curators","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 development","termid":"GO:0021571"}


id: PR:O74312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg9 gene.","definition_xrefs":["UniProtKB:O74312","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.07c","synonyms":[{"name":"Spom972h-atg9","type":"exact"}],"termid":"PR:O74312"}


id: PBO:0049030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 17","termid":"PBO:0049030"}


id: GO:0046271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aromatic derivatives of trans-cinnamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"phenylpropanoid catabolic process","synonyms":[{"name":"phenylpropanoid breakdown","type":"exact"},{"name":"phenylpropanoid catabolism","type":"exact"},{"name":"phenylpropanoid degradation","type":"exact"}],"termid":"GO:0046271"}


id: FYPO:0001950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion determined to be sequestered in a cell is lower than normal.","definition_xrefs":["PMID:2145281","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased sequestered calcium level","synonyms":[{"name":"decreased cellular sequestered calcium level","type":"exact"},{"name":"decreased levels of sequestered calcium","type":"exact"},{"name":"decreased sequestered calcium ion level","type":"exact"},{"name":"decreased sequestered calcium level during mitotic cell cycle","type":"related"},{"name":"decreased sequestered calcium level during vegetative growth","type":"exact"},{"name":"reduced sequestered calcium level","type":"exact"}],"termid":"FYPO:0001950"}


id: PBO:0048678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase pseudogene 1","termid":"PBO:0048678"}


id: MOD:00204
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to D-leucine.","definition_xrefs":["PubMed:12135762","PubMed:1548227","RESID:AA0197","PubMed:10461743","ChEBI:30005","PubMed:1358533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-leucine","synonyms":[{"name":"(2R)-2-amino-4-methylpentanoic acid","type":"exact"},{"name":"D-Leu","type":"exact"},{"name":"D-leucine","type":"exact"},{"name":"MOD_RES D-leucine","type":"exact"},{"name":"alpha-aminoisocaproic acid","type":"exact"}],"termid":"MOD:00204"}


id: PBO:0053184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LENG8 antisense RNA 1","termid":"PBO:0053184"}


id: GO:1903569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to ciliary membrane.","definition_xrefs":["PMID:22072986","GOC:cilia","GOC:krc","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to cilium","termid":"GO:1903566"},{"relation_name":"is_a","term_name":"regulation of protein localization to ciliary membrane","termid":"GO:1903567"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell periphery","termid":"GO:1904377"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"protein localization to ciliary membrane","termid":"GO:1903441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to ciliary membrane","synonyms":[{"name":"activation of protein localisation in ciliary membrane","type":"narrow"},{"name":"activation of protein localisation to ciliary membrane","type":"narrow"},{"name":"activation of protein localization in ciliary membrane","type":"narrow"},{"name":"activation of protein localization to ciliary membrane","type":"narrow"},{"name":"positive regulation of protein localisation in ciliary membrane","type":"exact"},{"name":"positive regulation of protein localisation to ciliary membrane","type":"exact"},{"name":"positive regulation of protein localization in ciliary membrane","type":"exact"},{"name":"up regulation of protein localisation in ciliary membrane","type":"exact"},{"name":"up regulation of protein localisation to ciliary membrane","type":"exact"},{"name":"up regulation of protein localization in ciliary membrane","type":"exact"},{"name":"up regulation of protein localization to ciliary membrane","type":"exact"},{"name":"up-regulation of protein localisation in ciliary membrane","type":"exact"},{"name":"up-regulation of protein localisation to ciliary membrane","type":"exact"},{"name":"up-regulation of protein localization in ciliary membrane","type":"exact"},{"name":"up-regulation of protein localization to ciliary membrane","type":"exact"},{"name":"upregulation of protein localisation in ciliary membrane","type":"exact"},{"name":"upregulation of protein localisation to ciliary membrane","type":"exact"},{"name":"upregulation of protein localization in ciliary membrane","type":"exact"},{"name":"upregulation of protein localization to ciliary membrane","type":"exact"}],"termid":"GO:1903569"}


id: PATO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000240 contact righting reflex (obsolete PATO:0000240)","termid":"PATO:0000240"}


id: MONDO:0032581
data:
  {"annotated_genes":["SJAG_01374","SJAG_03986"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85917,85918],"is_not":false,"summary":null,"term":"MONDO:0032581"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01374":null,"SJAG_03986":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4748549","DOID:0080393","GARD:16300","MEDGEN:1648464","OMIM:618177"],"synonyms":[{"name":"NEPHROTIC SYNDROME, TYPE 18","type":"related"},{"name":"NPHS18","type":"related"}],"termid":"MONDO:0032581","terms_by_termid":{"MONDO:0032581":null},"xrefs":{"Monarch":{"xref_id":"0032581"}}}


id: PBO:0058859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8088","termid":"PBO:0058859"}


id: PBO:0108703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp10","termid":"PBO:0108703"}


id: GO:0039624
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer layer of a double or triple concentric icosahedral capsid. Outer capsids are part of reoviridae and cystoviridae virions.","definition_xrefs":["UniProtKB-KW:KW-1152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral outer capsid","synonyms":[{"name":"outer capsid","type":"exact"}],"termid":"GO:0039624"}


id: MONDO:0014716
data:
  {"annotated_genes":["SJAG_02723","SJAG_03067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85540,85541],"is_not":false,"summary":null,"term":"MONDO:0014716"}]},"cv_name":"mondo","definition":"A rare multiple congenital anomalies/dysmorphic syndrome with intellectual disability, characterized by macrocephaly, intellectual disability, seizures, dysmorphic facial features (including tall forehead, downslanting palpebral fissures, hypertelorism, depressed nasal bridge, and macrostomia), megalencephaly, and small thorax. Other reported features are umbilical hernia, muscular hypotonia, global developmental delay, autistic behavior, and café-au-lait spots, among others.","definition_xrefs":["Orphanet:457485"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","termid":"MONDO:0100283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02723":null,"SJAG_03067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"macrocephaly-intellectual disability-neurodevelopmental disorder-small thorax syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:899689","NORD:91167","GARD:13636","OMIM:616638","UMLS:C4225259"],"synonyms":[{"name":"MINDS syndrome","type":"exact"},{"name":"SKS","type":"related"},{"name":"SMITH-Kingsmore syndrome","type":"related"},{"name":"Smith-Kingsmore Syndrome","type":"exact"},{"name":"Smith-Kingsmore syndrome","type":"exact"},{"name":"macrocephaly, seizures, intellectual disability, umbilical hernia, and Facial Dysmorphism","type":"related"},{"name":"macrocephaly, seizures, mental retardation, umbilical hernia, and Facial Dysmorphism","type":"related"}],"termid":"MONDO:0014716","terms_by_termid":{"MONDO:0014716":null},"xrefs":{"Monarch":{"xref_id":"0014716"}}}


id: PBO:0069355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 615, pseudogene","termid":"PBO:0069355"}


id: SO:0002199
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has no parent. It is the original gene, which is functional in some species but disrupted in some way (indels, mutation, recombination) in another species or strain.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unitary_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:unitary","type":"exact"},{"name":"unitary pseudogenic tRNA","type":"exact"}],"termid":"SO:0002199"}


id: PBO:0116409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 5","termid":"PBO:0116409"}


id: GO:1990583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme phospholipase D.","definition_xrefs":["PMID:7972129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activator activity","termid":"GO:0016004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"phospholipase D activator activity","termid":"GO:1990583"}


id: GO:0102342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxycerotoyl-CoA + NADP = 3-oxohexacosanoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-cerotoyl-CoA reductase activity (obsolete GO:0102342)","termid":"GO:0102342"}


id: PBO:0044947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 2","termid":"PBO:0044947"}


id: PBO:0058686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6814","termid":"PBO:0058686"}


id: GO:0022840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a narrow pore channel that is open even in an unstimulated or 'resting' state.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narrow pore channel activity","termid":"GO:0022842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"leak channel activity","termid":"GO:0022840"}


id: MONDO:0018473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperlipoproteinemia (HLP) type 3 is a rare combined hyperlipidemia characterized by high levels of cholesterol and triglycerides, transported by intermediate density lipoproteins (IDLs), and a high risk of premature atherosclerosis and cardiovascular disease.","definition_xrefs":["Orphanet:412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperlipidemia","termid":"MONDO:0001336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"hyperlipoproteinemia type 3","secondary_identifiers":["UMLS:C0020479","DOID:3145","GARD:6703","MedDRA:10060751","MEDGEN:9364","OMIM:617347","SCTID:398796005"],"synonyms":[{"name":"Broad beta disease","type":"related"},{"name":"Broad-betalipoproteinemia","type":"exact"},{"name":"HLP type 3","type":"exact"},{"name":"apolipoprotein E, deficiency or defect of","type":"related"},{"name":"carbohydrate induced hyperlipemia","type":"exact"},{"name":"coronary artery disease, Severe, Susceptibility to","type":"related"},{"name":"dysbetalipoproteinemia","type":"related"},{"name":"dysbetalipoproteinemia due to defect in apolipoprotein E-D","type":"related"},{"name":"dyslipidaemia type 3","type":"exact"},{"name":"dyslipidemia type 3","type":"exact"},{"name":"familial Hyperbeta- and Prebetalipoproteinemia","type":"related"},{"name":"familial dysbetalipoproteinemia","type":"exact"},{"name":"familial hypercholesterolaemia with hyperlipaemia","type":"related"},{"name":"familial hypercholesterolemia with hyperlipemia","type":"related"},{"name":"familial hyperlipoproteinemia type 3","type":"exact"},{"name":"familial type 3 hyperlipoproteinemia","type":"exact"},{"name":"floating-betalipoproteinemia","type":"related"},{"name":"hyperlipemia with Familial Hypercholesterolemic xanthomatosis","type":"related"},{"name":"hyperlipidemia type 3","type":"exact"},{"name":"hyperlipoproteinemia type III","type":"exact"},{"name":"hyperlipoproteinemia, type III","type":"related"},{"name":"low density lipoprotein cholesterol level quantitative trait locus 5","type":"related"},{"name":"remnant disease","type":"exact"},{"name":"remnant hyperlipidemia","type":"exact"},{"name":"remnant removal disease","type":"related"}],"termid":"MONDO:0018473","xrefs":{"Monarch":{"xref_id":"0018473"}}}


id: PBO:0081516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 425","termid":"PBO:0081516"}


id: GO:0052743
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990649"},{"annotations":[107758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052659"},{"annotations":[107760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol tetrakisphosphate + H2O = myo-inositol trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"inositol tetrakisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052743","terms_by_termid":{"GO:0052659":null,"GO:1990649":null,"GO:1990650":null}}


id: GO:0016321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle in a female.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"},{"relation_name":"part_of","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"female meiosis chromosome segregation","termid":"GO:0016321"}


id: GO:0001098
data:
  {"annotated_genes":["SJAG_00159","SJAG_01151","SJAG_04933","SJAG_00139","SJAG_00448","SJAG_04353","SJAG_03118","SJAG_00095","SJAG_00483","SJAG_01610"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[72026,77617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[75940,71838,70501,78197,78187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[78761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001096"},{"annotations":[75793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001097"}]},"cv_name":"molecular_function","definition":"Binding to a component of the basal transcription machinery which is composed of the RNA polymerase core enzyme and the basal transcription factor(s), the minimal set of factors required for formation of the preinitiation complex (PIC) by the RNA polymerase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00139":null,"SJAG_00159":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"basal transcription machinery binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0001098","terms_by_termid":{"GO:0000993":null,"GO:0001096":null,"GO:0001097":null,"GO:0099122":null,"GO:1990269":null}}


id: GO:0019121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of linking a protein to peptidoglycan via the epsilon amino group of lysine to the diaminopimelic acid of the peptidoglycan.","definition_xrefs":["RESID:AA0218"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan-protein cross-linking via N6-mureinyl-L-lysine (obsolete GO:0019121)","termid":"GO:0019121"}


id: MONDO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with the organism Candida.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidiasis","secondary_identifiers":["MEDGEN:14299","ICD9:112.9","ICD10CM:B37","ICD9:112","SCTID:78048006","UMLS:C0006840","MESH:D002177","ICD9:112.89","NCIT:C26711","DOID:1508"],"synonyms":[{"name":"Candida <Debaryomycetaceae> infection","type":"exact"},{"name":"Candida infection","type":"exact"},{"name":"Candidosis","type":"exact"},{"name":"disseminated candidiasis","type":"narrow"},{"name":"infections, Candida <Debaryomycetaceae>","type":"related"},{"name":"systemic candidiasis","type":"narrow"},{"name":"thrush","type":"exact"}],"termid":"MONDO:0002026","xrefs":{"Monarch":{"xref_id":"0002026"}}}


id: GO:0047089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrochelirubine + H+ + NADPH + O2 = 12-hydroxydihydrochelirubine + H2O + NADP+.","definition_xrefs":["RHEA:10156","EC:1.14.14.101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dihydrochelirubine 12-monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.57-RXN","KEGG_REACTION:R04708"],"synonyms":[{"name":"dihydrochelirubine 12-hydroxylase activity","type":"exact"},{"name":"dihydrochelirubine,NADPH:oxygen oxidoreductase (12-hydroxylating)","type":"related"}],"termid":"GO:0047089"}


id: PBO:0038473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 11, pseudogene","termid":"PBO:0038473"}


id: GO:0039677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or a viral particle out of the host cell nucleus that involves disruption of the nuclear membrane envelope by the virus.","definition_xrefs":["VZ:2176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit of virus from host cell nucleus","termid":"GO:0039674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus via nuclear envelope disassembly","synonyms":[{"name":"exit of virus from host cell nucleus via nuclear envelope breakdown","type":"exact"}],"termid":"GO:0039677"}


id: PBO:0054713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2122","termid":"PBO:0054713"}


id: PBO:0079854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B3 (pseudogene)","termid":"PBO:0079854"}


id: GO:0098586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to virus","termid":"GO:0009615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to virus","termid":"GO:0098586"}


id: PBO:0054320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1712","termid":"PBO:0054320"}


id: GO:1902322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methyl-branched fatty acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:15340492","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"regulates","term_name":"methyl-branched fatty acid biosynthetic process","termid":"GO:1902321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"regulation of methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"regulation of methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902322"}


id: PR:Q9HFE8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tra1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFE8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription-associated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.03c","synonyms":[{"name":"Spom972h-tra1","type":"exact"}],"termid":"PR:Q9HFE8"}


id: PBO:0080206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VGF nerve growth factor inducible","termid":"PBO:0080206"}


id: GO:0044847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a symbiont acquires iron from its host, either from heme or other iron containing molecules such as transferrin and lactoferrin. Begins with either the secretion of symbiont gene products that bind iron- or heme-containing molecules (siderophores and hemophores) from the symbiont cell into the host, or by expression of receptors that bind iron- or heme-containing molecules on the symbiont cell surface. Ends when the iron-containing compound is transported into the symbiont cell.","definition_xrefs":["PMID:15487950","PMID:22865843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquisition of nutrients from host","termid":"GO:0044002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iron acquisition from host","secondary_identifiers":["GO:0052099"],"synonyms":[{"name":"acquisition by organism of nutrients from host via siderophores","type":"related"},{"name":"acquisition by symbiont of nutrients from host via siderophores","type":"narrow"},{"name":"heme acquisition","type":"related"},{"name":"iron acquisition","type":"broad"},{"name":"iron acquisition by symbiont from host","type":"exact"},{"name":"iron acquisition by symbiont from host heme","type":"narrow"}],"termid":"GO:0044847"}


id: MONDO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tularemia (obsolete MONDO:0002213)","termid":"MONDO:0002213","xrefs":{"Monarch":{"xref_id":"0002213"}}}


id: MONDO:0100079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SCN1A gene.","definition_xrefs":["OMIM:607208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 6","synonyms":[{"name":"DEE6","type":"exact"},{"name":"Dravet syndrome","type":"related"},{"name":"EIEE6","type":"exact"},{"name":"developmental and epileptic encephalopathy, 6","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 6","type":"exact"}],"termid":"MONDO:0100079","xrefs":{"Monarch":{"xref_id":"0100079"}}}


id: PBO:0058774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7108","termid":"PBO:0058774"}


id: PBO:0110427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP10 pseudogene 2","termid":"PBO:0110427"}


id: GO:0007230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-o-sensing receptor pathway (obsolete GO:0007230)","synonyms":[{"name":"calcium-o-sensing receptor pathway","type":"exact"}],"termid":"GO:0007230"}


id: PR:P04910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:15226425","PMID:19965387","PMID:21516229","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2","termid":"PR:000027545"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.06c","secondary_identifiers":["UniProtKB:P04910","PR:000027546"],"synonyms":[{"name":"SPAC19G12.06C","type":"related"},{"name":"Spom972h-HTA2","type":"exact"}],"termid":"PR:P04910"}


id: GO:0052048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance (obsolete GO:0052048)","synonyms":[{"name":"interaction with host via secreted substance during symbiotic interaction","type":"related"},{"name":"interaction with host via secreted substance involved in symbiotic interaction","type":"related"}],"termid":"GO:0052048"}


id: MONDO:0012194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial berry aneurysm","termid":"MONDO:0016483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm, intracranial berry, 3","secondary_identifiers":["DOID:0080966","MESH:C563792","GARD:18322","MEDGEN:332280","UMLS:C1836757","OMIM:609122"],"synonyms":[{"name":"ANIB3","type":"exact"},{"name":"aneurysm, intracranial BERRY, 3","type":"related"}],"termid":"MONDO:0012194","xrefs":{"Monarch":{"xref_id":"0012194"}}}


id: PBO:0028237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus","termid":"PBO:0028237"}


id: PBO:0040918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 22","termid":"PBO:0040918"}


id: GO:0019803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The carboxylation of peptidyl-aspartic acid to form peptidyl-L-beta-carboxyaspartic acid.","definition_xrefs":["RESID:AA0304"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-aspartic acid carboxylation (obsolete GO:0019803)","termid":"GO:0019803"}


id: GO:0047576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoate + H2O = 4-hydroxybenzoate + chloride + H+.","definition_xrefs":["RHEA:23440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"4-chlorobenzoate dehalogenase activity","secondary_identifiers":["EC:3.8.1.6","MetaCyc:4-CHLOROBENZOATE-DEHALOGENASE-RXN","KEGG_REACTION:R01307"],"synonyms":[{"name":"4-chlorobenzoate chlorohydrolase activity","type":"related"},{"name":"halobenzoate dehalogenase activity","type":"related"}],"termid":"GO:0047576"}


id: PBO:0001408
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase-Related protein from S. Pombe","termid":"PBO:0001408"}


id: PATO:0001263
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow","termid":"PATO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark yellow","termid":"PATO:0001263"}


id: PBO:0028950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_eisosome","termid":"PBO:0028950"}


id: GO:0033353
data:
  {"annotated_genes":["SJAG_03556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112146],"is_not":false,"summary":null,"term":"GO:0033353"}]},"cv_name":"biological_process","definition":"A cyclic series of interconversions involving S-adenosylmethionine, S-adenosyl-L-homocysteine, L-cysteine, and L-methionine. Couples utilization of the methyl group of SAM with recycling of the homocysteinyl group and regeneration of methionine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine metabolic process","termid":"GO:0046500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-adenosylmethionine cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SAM cycle","type":"exact"},{"name":"activated methyl cycle","type":"exact"}],"termid":"GO:0033353","terms_by_termid":{"GO:0033353":null}}


id: GO:1904225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glucuronosyltransferase activity.","definition_xrefs":["GOC:BHF","GO_REF:0000059","GOC:TermGenie","GOC:rl","PMID:20610558"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glucuronosyltransferase activity (obsolete GO:1904225)","synonyms":[{"name":"activation of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"activation of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"activation of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"activation of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"activation of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"activation of GT activity","type":"narrow"},{"name":"activation of PNP-UDPGT","type":"related"},{"name":"activation of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"activation of UDP glucuronic acid transferase activity","type":"narrow"},{"name":"activation of UDP glucuronosyltransferase activity","type":"narrow"},{"name":"activation of UDP glucuronyltransferase activity","type":"narrow"},{"name":"activation of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"narrow"},{"name":"activation of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"activation of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"activation of UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of UDP-glucuronyltransferase activity","type":"narrow"},{"name":"activation of UDPGA transferase activity","type":"narrow"},{"name":"activation of UDPGA-glucuronyltransferase activity","type":"narrow"},{"name":"activation of UDPGT activity","type":"narrow"},{"name":"activation of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"activation of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of bilirubin UDPGT activity","type":"narrow"},{"name":"activation of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"activation of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"activation of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"activation of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"activation of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"activation of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"activation of glucuronosyltransferase activity","type":"narrow"},{"name":"activation of morphine glucuronyltransferase activity","type":"narrow"},{"name":"activation of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"activation of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"activation of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"activation of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"activation of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of pnp-UDPGT activity","type":"narrow"},{"name":"activation of uridine 5'-diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"activation of uridine diphosphate glucuronyltransferase activity","type":"narrow"},{"name":"activation of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"activation of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"activation of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"activation of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"activation of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"activation of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"activation of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"activation of uridine diphosphoglucuronosyltransferase activity","type":"narrow"},{"name":"activation of uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"positive regulation of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"positive regulation of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"positive regulation of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"positive regulation of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"positive regulation of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"positive regulation of GT activity","type":"exact"},{"name":"positive regulation of PNP-UDPGT","type":"related"},{"name":"positive regulation of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of UDP glucuronic acid transferase activity","type":"exact"},{"name":"positive regulation of UDP glucuronosyltransferase activity","type":"exact"},{"name":"positive regulation of UDP glucuronyltransferase activity","type":"exact"},{"name":"positive regulation of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"exact"},{"name":"positive regulation of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"positive regulation of UDP-glucuronosyltransferase activity","type":"exact"},{"name":"positive regulation of UDP-glucuronyltransferase activity","type":"exact"},{"name":"positive regulation of UDPGA transferase activity","type":"exact"},{"name":"positive regulation of UDPGA-glucuronyltransferase activity","type":"exact"},{"name":"positive regulation of UDPGT activity","type":"exact"},{"name":"positive regulation of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"positive regulation of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of bilirubin UDPGT activity","type":"narrow"},{"name":"positive regulation of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"positive regulation of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"positive regulation of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"positive regulation of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"positive regulation of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of morphine glucuronyltransferase activity","type":"narrow"},{"name":"positive regulation of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"positive regulation of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"positive regulation of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"positive regulation of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of pnp-UDPGT activity","type":"narrow"},{"name":"positive regulation of uridine 5'-diphosphoglucuronyltransferase activity","type":"exact"},{"name":"positive regulation of uridine diphosphate glucuronyltransferase activity","type":"exact"},{"name":"positive regulation of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"positive regulation of uridine diphosphoglucuronosyltransferase activity","type":"exact"},{"name":"positive regulation of uridine diphosphoglucuronyltransferase activity","type":"exact"},{"name":"up regulation of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"up regulation of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"up regulation of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"up regulation of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"up regulation of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"up regulation of GT activity","type":"exact"},{"name":"up regulation of PNP-UDPGT","type":"related"},{"name":"up regulation of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of UDP glucuronic acid transferase activity","type":"exact"},{"name":"up regulation of UDP glucuronosyltransferase activity","type":"exact"},{"name":"up regulation of UDP glucuronyltransferase activity","type":"exact"},{"name":"up regulation of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"exact"},{"name":"up regulation of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"up regulation of UDP-glucuronosyltransferase activity","type":"exact"},{"name":"up regulation of UDP-glucuronyltransferase activity","type":"exact"},{"name":"up regulation of UDPGA transferase activity","type":"exact"},{"name":"up regulation of UDPGA-glucuronyltransferase activity","type":"exact"},{"name":"up regulation of UDPGT activity","type":"exact"},{"name":"up regulation of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"up regulation of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of bilirubin UDPGT activity","type":"narrow"},{"name":"up regulation of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"up regulation of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"up regulation of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"up regulation of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"up regulation of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of glucuronosyltransferase activity","type":"exact"},{"name":"up regulation of morphine glucuronyltransferase activity","type":"narrow"},{"name":"up regulation of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"up regulation of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"up regulation of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"up regulation of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of pnp-UDPGT activity","type":"narrow"},{"name":"up regulation of uridine 5'-diphosphoglucuronyltransferase activity","type":"exact"},{"name":"up regulation of uridine diphosphate glucuronyltransferase activity","type":"exact"},{"name":"up regulation of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"up regulation of uridine diphosphoglucuronosyltransferase activity","type":"exact"},{"name":"up regulation of uridine diphosphoglucuronyltransferase activity","type":"exact"},{"name":"up-regulation of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"up-regulation of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"up-regulation of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"up-regulation of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"up-regulation of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"up-regulation of GT activity","type":"exact"},{"name":"up-regulation of PNP-UDPGT","type":"related"},{"name":"up-regulation of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of UDP glucuronic acid transferase activity","type":"exact"},{"name":"up-regulation of UDP glucuronosyltransferase activity","type":"exact"},{"name":"up-regulation of UDP glucuronyltransferase activity","type":"exact"},{"name":"up-regulation of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"exact"},{"name":"up-regulation of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"up-regulation of UDP-glucuronosyltransferase activity","type":"exact"},{"name":"up-regulation of UDP-glucuronyltransferase activity","type":"exact"},{"name":"up-regulation of UDPGA transferase activity","type":"exact"},{"name":"up-regulation of UDPGA-glucuronyltransferase activity","type":"exact"},{"name":"up-regulation of UDPGT activity","type":"exact"},{"name":"up-regulation of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"up-regulation of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of bilirubin UDPGT activity","type":"narrow"},{"name":"up-regulation of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"up-regulation of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"up-regulation of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"up-regulation of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"up-regulation of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of glucuronosyltransferase activity","type":"exact"},{"name":"up-regulation of morphine glucuronyltransferase activity","type":"narrow"},{"name":"up-regulation of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"up-regulation of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"up-regulation of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"up-regulation of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of pnp-UDPGT activity","type":"narrow"},{"name":"up-regulation of uridine 5'-diphosphoglucuronyltransferase activity","type":"exact"},{"name":"up-regulation of uridine diphosphate glucuronyltransferase activity","type":"exact"},{"name":"up-regulation of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"up-regulation of uridine diphosphoglucuronosyltransferase activity","type":"exact"},{"name":"up-regulation of uridine diphosphoglucuronyltransferase activity","type":"exact"},{"name":"upregulation of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"upregulation of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"upregulation of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"upregulation of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"upregulation of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"upregulation of GT activity","type":"exact"},{"name":"upregulation of PNP-UDPGT","type":"related"},{"name":"upregulation of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of UDP glucuronic acid transferase activity","type":"exact"},{"name":"upregulation of UDP glucuronosyltransferase activity","type":"exact"},{"name":"upregulation of UDP glucuronyltransferase activity","type":"exact"},{"name":"upregulation of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"exact"},{"name":"upregulation of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"upregulation of UDP-glucuronosyltransferase activity","type":"exact"},{"name":"upregulation of UDP-glucuronyltransferase activity","type":"exact"},{"name":"upregulation of UDPGA transferase activity","type":"exact"},{"name":"upregulation of UDPGA-glucuronyltransferase activity","type":"exact"},{"name":"upregulation of UDPGT activity","type":"exact"},{"name":"upregulation of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"upregulation of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of bilirubin UDPGT activity","type":"narrow"},{"name":"upregulation of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"upregulation of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"upregulation of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"upregulation of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"upregulation of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of glucuronosyltransferase activity","type":"exact"},{"name":"upregulation of morphine glucuronyltransferase activity","type":"narrow"},{"name":"upregulation of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"upregulation of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"upregulation of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"upregulation of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of pnp-UDPGT activity","type":"narrow"},{"name":"upregulation of uridine 5'-diphosphoglucuronyltransferase activity","type":"exact"},{"name":"upregulation of uridine diphosphate glucuronyltransferase activity","type":"exact"},{"name":"upregulation of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"upregulation of uridine diphosphoglucuronosyltransferase activity","type":"exact"},{"name":"upregulation of uridine diphosphoglucuronyltransferase activity","type":"exact"}],"termid":"GO:1904225"}


id: PBO:0042537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 6","termid":"PBO:0042537"}


id: PBO:0049625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 28","termid":"PBO:0049625"}


id: PBO:0028259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3K9me_binding","termid":"PBO:0028259"}


id: PBO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A beta","termid":"PBO:0002337"}


id: PBO:0003639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-TEFb-associated cyclin-dependent protein kinase Cdk9","termid":"PBO:0003639"}


id: PBO:0071356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 15","termid":"PBO:0071356"}


id: PBO:0003293
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Srb9","termid":"PBO:0003293"}


id: PBO:0038668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACSL3 antisense RNA 1","termid":"PBO:0038668"}


id: PBO:0035799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-complete_but_unequal_mitotic_sister_chromatid_segregation_with_unseparated_chromosomes","termid":"PBO:0035799"}


id: GO:0046927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-L-threo-threonine at the alpha-carbon to form D-allo-threonine. This is coupled with the formation of the cross-link 2-(S-L-cysteinyl)-D-allo-threonine.","definition_xrefs":["PMID:12696888"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-threonine racemization (obsolete GO:0046927)","termid":"GO:0046927"}


id: MONDO:1011940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ocular-skeletal dysplasia, non-human animal","secondary_identifiers":["OMIA:000301"],"termid":"MONDO:1011940","xrefs":{"Monarch":{"xref_id":"1011940"}}}


id: PBO:0061727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 1","termid":"PBO:0061727"}


id: FYPO:0005417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic spindle elongation begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0000002","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"premature mitotic spindle elongation","synonyms":[{"name":"advanced mitotic spindle elongation","type":"exact"},{"name":"premature mitotic sister chromatid separation during vegetative growth","type":"related"},{"name":"premature spindle elongation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005417"}


id: PBO:0070542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 8","termid":"PBO:0070542"}


id: FYPO:0002375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0002375)","synonyms":[{"name":"decreased peptidyl-tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"reduced protein tyrosine phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002375"}


id: PBO:0091265
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by C. albicans SFU1","termid":"PBO:0091265"}


id: PBO:0059013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane magnesium transporter 1","termid":"PBO:0059013"}


id: GO:1900500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of butyryl-CoA catabolic process to butyrate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"butyryl-CoA catabolic process to butyrate","termid":"GO:0044581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0006790","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of butyryl-CoA catabolic process to butyrate","synonyms":[{"name":"regulation of butyryl-CoA catabolism to butyrate","type":"exact"}],"termid":"GO:1900500"}


id: GO:1904003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sebum secreting cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:16901790","GO_REF:0000058","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of sebum secreting cell proliferation","termid":"GO:1904002"},{"relation_name":"negatively_regulates","term_name":"sebum secreting cell proliferation","termid":"GO:1990654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sebum secreting cell proliferation","synonyms":[{"name":"down regulation of sebocyte proliferation","type":"related"},{"name":"down regulation of sebum secreting cell proliferation","type":"exact"},{"name":"down-regulation of sebocyte proliferation","type":"related"},{"name":"down-regulation of sebum secreting cell proliferation","type":"exact"},{"name":"downregulation of sebocyte proliferation","type":"related"},{"name":"downregulation of sebum secreting cell proliferation","type":"exact"},{"name":"inhibition of sebocyte proliferation","type":"related"},{"name":"inhibition of sebum secreting cell proliferation","type":"narrow"},{"name":"negative regulation of sebocyte proliferation","type":"related"}],"termid":"GO:1904003"}


id: SO:0001122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of two consecutive residues with dihedral angles: Residue(i): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees. Residue(i+1): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_nest_motif","termid":"SO:0001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nest_right_left_motif","secondary_identifiers":["BS:00225"],"synonyms":[{"name":"nest_right_left","type":"exact"},{"name":"nest_rl","type":"exact"},{"name":"polypeptide nest right left motif","type":"exact"}],"termid":"SO:0001122"}


id: GO:0019336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol-containing compound catabolic process","secondary_identifiers":["MetaCyc:PHENOLDEG-PWY"],"synonyms":[{"name":"phenol-containing compound breakdown","type":"exact"},{"name":"phenol-containing compound catabolism","type":"exact"},{"name":"phenol-containing compound degradation","type":"exact"}],"termid":"GO:0019336"}


id: MONDO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyshormonogenic goiter","secondary_identifiers":["DOID:12175","SCTID:190304001","ICD9:246.1","MEDGEN:508873","UMLS:C0152077"],"termid":"MONDO:0001460","xrefs":{"Monarch":{"xref_id":"0001460"}}}


id: GO:0015923
data:
  {"annotated_genes":["SJAG_04851","SJAG_01883","SJAG_03032","SJAG_04850","SJAG_00310","SJAG_01858","SJAG_05272","SJAG_02711"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004559"},{"annotations":[96435,101734,101746,101745,118208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008496"},{"annotations":[95214,66297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00310":null,"SJAG_01858":null,"SJAG_01883":null,"SJAG_02711":null,"SJAG_03032":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0015923","terms_by_termid":{"GO:0004559":null,"GO:0004571":null,"GO:0008496":null}}


id: PBO:0084545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the protein disulfide isomerase (PDI) family; interacts with and inhibits the chaperone activity of Cne1p; MPD1 overexpression in a pdi1 null mutant suppresses defects in Pdi1p functions such as carboxypeptidase Y maturation","termid":"PBO:0084545"}


id: MONDO:1011546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intervertebral disc disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intervertebral disc disease, non-human animal","termid":"MONDO:1011452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intervertebral disc disease, dog","secondary_identifiers":["OMIA:000157-9615"],"termid":"MONDO:1011546","xrefs":{"Monarch":{"xref_id":"1011546"}}}


id: PBO:0070691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8","termid":"PBO:0070691"}


id: MONDO:0017869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chondroectodermal dysplasia with night blindness is a rare genetic bone development disorder characterized by proportionate short stature, nail dysplasia (enlarged, convex, hypertrophic nails), hypodontia and night blindness. Osteopenia, a tendency to present fractures, talipes varus with abnormal gait, ear infections, and watering eyes due to narrow tear ducts are frequently associated. Radiologically patients present delayed bone age on wrist X-rays, platyspondyly, and broad metaphyses of humeri with dense and thickened growth plates.","definition_xrefs":["Orphanet:319195"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"chondroectodermal dysplasia with night blindness","secondary_identifiers":["MEDGEN:1641815","GARD:21408","UMLS:C4706300"],"termid":"MONDO:0017869","xrefs":{"Monarch":{"xref_id":"0017869"}}}


id: MONDO:0018842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary effusion lymphoma (PEL) is a large B-cell lymphoma located in the body cavities, characterized by pleural, peritoneal, and pericardial fluid lymphomatous effusions and that is always associated with human herpes virus-8 (HHV-8).","definition_xrefs":["Orphanet:48686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human herpesvirus 8-related tumor","termid":"MONDO:0015157"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"primary effusion lymphoma","secondary_identifiers":["UMLS:C1292753","ONCOTREE:PEL","GARD:9247","EFO:1000491","icd11.foundation:697911710","ICDO:9678/3","MedDRA:10065857","MESH:D054685","NCIT:C6915","SCTID:713516007","MEDGEN:220953","ICD9:202.80"],"synonyms":[{"name":"AIDS-related lymphoma","type":"related"},{"name":"PEL","type":"exact"},{"name":"body cavity-based lymphoma","type":"exact"},{"name":"primary Effusion Lymphoma","type":"exact"}],"termid":"MONDO:0018842","xrefs":{"Monarch":{"xref_id":"0018842"}}}


id: GO:0051254
data:
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regulation of RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of RNA metabolic process","type":"narrow"},{"name":"positive regulation of RNA metabolism","type":"exact"},{"name":"stimulation of RNA metabolic process","type":"narrow"},{"name":"up regulation of RNA metabolic process","type":"exact"},{"name":"up-regulation of RNA metabolic process","type":"exact"},{"name":"upregulation of RNA metabolic process","type":"exact"}],"termid":"GO:0051254","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0032786":null,"GO:0032968":null,"GO:0036450":null,"GO:0045893":null,"GO:0045899":null,"GO:0045943":null,"GO:0045944":null,"GO:0048026":null,"GO:0060212":null,"GO:0060213":null,"GO:0060261":null,"GO:0060963":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:0120272":null,"GO:1904595":null,"GO:1905746":null,"GO:1990074":null,"GO:2000234":null}}


id: SO:0001909
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift variant that causes the translational reading frame to be extended relative to the reference feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"internal_feature_elongation","termid":"SO:0001908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_elongation","synonyms":[{"name":"ANNOVAR:frameshift insertion","type":"exact"},{"name":"Jannovar:frameshift_elongation","type":"exact"},{"name":"frameshift elongation","type":"exact"}],"termid":"SO:0001909"}


id: FYPO:0002939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an RNA catabolic process that degrades mRNA encoded in the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0000956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear mRNA catabolic process","synonyms":[{"name":"normal nuclear mRNA breakdown","type":"exact"},{"name":"normal nuclear mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"normal nuclear mRNA catabolic process during vegetative growth","type":"exact"},{"name":"normal nuclear mRNA catabolism","type":"exact"},{"name":"normal nuclear mRNA degradation","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process","type":"exact"}],"termid":"FYPO:0002939"}


id: PR:O94671
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC776.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.03","synonyms":[{"name":"HDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC776.03","type":"exact"}],"termid":"PR:O94671"}


id: FYPO:0005283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable when cells the population are subject to inositol starvation.","definition_xrefs":["PomBase:mah","PMID:19606215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased viability upon inositol starvation","synonyms":[{"name":"increased cell population viability upon inositol starvation","type":"exact"},{"name":"increased viability during inositol starvation","type":"exact"},{"name":"increased viability upon inositol depletion","type":"exact"},{"name":"increased viability upon inositol deprivation","type":"exact"},{"name":"increased viability upon inositol limitation","type":"exact"}],"termid":"FYPO:0005283"}


id: MONDO:0060732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetraamelia-multiple malformations syndrome","termid":"MONDO:0010110"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tetraamelia syndrome 2","secondary_identifiers":["DOID:0112193","MEDGEN:1648284","GARD:16286","UMLS:C4747923","OMIM:618021"],"synonyms":[{"name":"TETAMS2","type":"related"},{"name":"tetraamelia syndrome 2","type":"exact"},{"name":"tetraamelia syndrome 2 with pulmonary agenesis","type":"related"}],"termid":"MONDO:0060732","xrefs":{"Monarch":{"xref_id":"0060732"}}}


id: PBO:0057395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-3","termid":"PBO:0057395"}


id: PBO:0066375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 2","termid":"PBO:0066375"}


id: PBO:0050718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 4","termid":"PBO:0050718"}


id: PBO:0035802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035802"}


id: GO:0150116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell-substrate junction organization.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell-substrate junction organization","termid":"GO:0150115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell-substrate junction organization","termid":"GO:0150116"}


id: PBO:0042035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC88C divergent transcript","termid":"PBO:0042035"}


id: GO:0009169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine ribonucleoside monophosphate, a compound consisting of a purine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate catabolic process","termid":"GO:0009128"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate catabolic process","termid":"GO:0009158"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleoside monophosphate catabolic process","synonyms":[{"name":"purine ribonucleoside monophosphate breakdown","type":"exact"},{"name":"purine ribonucleoside monophosphate catabolism","type":"exact"},{"name":"purine ribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009169"}


id: GO:0030033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus organization","termid":"GO:0032528"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"microvillus assembly","synonyms":[{"name":"microvillus biogenesis","type":"related"}],"termid":"GO:0030033"}


id: FYPO:0003374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular coenzyme Q10 level","synonyms":[{"name":"normal cellular coenzyme Q10 accumulation","type":"related"},{"name":"normal cellular coenzyme Q10 level during mitotic cell cycle","type":"related"},{"name":"normal cellular coenzyme Q10 level during vegetative growth","type":"exact"}],"termid":"FYPO:0003374"}


id: GO:0016404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprost-13-enoate + NAD+ = (5Z,13E)-11-alpha-hydroxy-9,15-dioxoprost-13-enoate + NADH + H+.","definition_xrefs":["EC:1.1.1.141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"15-hydroxyprostaglandin dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-2161662","Reactome:R-HSA-9024766","MetaCyc:1.1.1.141-RXN","Reactome:R-HSA-9023968","Reactome:R-HSA-2161779","RHEA:11876"],"synonyms":[{"name":"(5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate:NAD+ 15-oxidoreductase activity","type":"related"},{"name":"11alpha,15-dihydroxy-9-oxoprost-13-enoate:NAD+ 15-oxidoreductase activity","type":"related"},{"name":"15-OH-PGDH","type":"related"},{"name":"15-hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"15-hydroxyprostanoic dehydrogenase activity","type":"related"},{"name":"NAD+-dependent 15-hydroxyprostaglandin dehydrogenase (type I)","type":"related"},{"name":"NAD-specific 15-hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"prostaglandin dehydrogenase activity","type":"related"}],"termid":"GO:0016404"}


id: PBO:0043062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion","termid":"PBO:0043062"}


id: PBO:0059049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic nuclear divisions 1","termid":"PBO:0059049"}


id: PBO:0063641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pepsinogen A4","termid":"PBO:0063641"}


id: PBO:0082704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the membrane-bound TORC2 complex; binds to phosphoinositide-(4,5)-bisphosphate through the C-terminal PH domain, anchoring TORC2 to the plasma membrane; binds directly to Tor2p substrate and downstream TORC2 effector Ypk2p, through the conserved central CRIM domain; may function along with Tsc11p as a scaffold for integrity of the TORC2 complex; role in regulating actin organization and growth control; orthologous to human MAPKAP1/SIN1","termid":"PBO:0082704"}


id: MONDO:0023657
data:
  {"annotated_genes":["SJAG_03041"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86047],"is_not":false,"summary":null,"term":"MONDO:0023657"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 65","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18547","MEDGEN:1787923","OMIM:619320","UMLS:C5543371"],"synonyms":[{"name":"MRD65","type":"exact"},{"name":"mental retardation, autosomal dominant 65","type":"exact"}],"termid":"MONDO:0023657","terms_by_termid":{"MONDO:0023657":null},"xrefs":{"Monarch":{"xref_id":"0023657"}}}


id: MONDO:0000647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the vagina. Representative examples include squamous papilloma and melanocytic nevus.","definition_xrefs":["NCIT:C3610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign female reproductive system neoplasm","termid":"MONDO:0000624"},{"relation_name":"is_a","term_name":"vaginal neoplasm","termid":"MONDO:0021050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign vaginal neoplasm","secondary_identifiers":["UMLS:C0154002","MEDGEN:57810","DOID:0060114","ICD9:221.1","SCTID:92473001"],"synonyms":[{"name":"benign neoplasm of the vagina","type":"exact"},{"name":"benign neoplasm of vagina","type":"exact"},{"name":"benign tumor of the vagina","type":"exact"},{"name":"benign tumor of vagina","type":"exact"},{"name":"benign tumour of the vagina","type":"exact"},{"name":"benign tumour of vagina","type":"exact"},{"name":"benign vaginal neoplasm","type":"exact"},{"name":"benign vaginal neoplasms","type":"exact"},{"name":"benign vaginal tumor","type":"exact"},{"name":"benign vaginal tumour","type":"exact"},{"name":"vagina benign neoplasm","type":"exact"},{"name":"vagina female reproductive organ benign neoplasm","type":"exact"},{"name":"vaginal benign neoplasm","type":"exact"}],"termid":"MONDO:0000647","xrefs":{"Monarch":{"xref_id":"0000647"}}}


id: GO:1905135
data:
  {"annotated_genes":["SJAG_02779","SJAG_02780"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71342,91568],"is_not":false,"summary":null,"term":"GO:1905135"}]},"cv_name":"biological_process","definition":"The directed movement of biotin from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:12557275","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biotin transport","termid":"GO:0015878"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02779":null,"SJAG_02780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"biotin import across plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0044756","GO:1901689"],"synonyms":[{"name":"biotin import","type":"related"},{"name":"biotin import into cell","type":"exact"}],"termid":"GO:1905135","terms_by_termid":{"GO:1905135":null}}


id: PBO:0045837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 27","termid":"PBO:0045837"}


id: GO:0044590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to iron molybdenum cofactor, the cofactor located at the active site of the molybdenum nitrogenase.","definition_xrefs":["GOC:tt","GOC:mengo_curators","PMID:18429691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"iron-sulfur-molybdenum cofactor binding","synonyms":[{"name":"FeMo co binding","type":"exact"},{"name":"FeMoco binding","type":"exact"}],"termid":"GO:0044590"}


id: FYPO:0007155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell cycle checkpoint phenotype in which the mitotic spindle assembly checkpoint is activated at an abnormal location. The mitotic spindle assembly checkpoint is normally activated at kinetochores, and delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ectopic activation of mitotic cell cycle spindle assembly checkpoint (obsolete FYPO:0007155)","synonyms":[{"name":"ectopic mitotic cell cycle spindle assembly checkpoint activation","type":"exact"}],"termid":"FYPO:0007155"}


id: _global:disconnected_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is disconnected_from Y iff it is not the case that X overlaps Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disconnected_from","termid":"_global:disconnected_from"}


id: PBO:0028979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_methionine_sulfur_source","termid":"PBO:0028979"}


id: FYPO:0004554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during S phase of the mitotic cell cycle and during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation","termid":"FYPO:0004261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitotic S phase during cellular response to ionizing radiation","synonyms":[{"name":"decreased protein phosphorylation during cellular response to ionizing radiation during S phase of mitotic cell cycle","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to ionizing radiation during mitotic S phase","type":"exact"},{"name":"decreased protein phosphorylation during mitotic S phase during cellular response to IR","type":"exact"},{"name":"decreased protein phosphorylation during mitotic S phase during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to IR during mitotic S phase","type":"exact"},{"name":"reduced protein phosphorylation during mitotic S phase during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004554"}


id: MONDO:0007110
data:
  {"annotated_genes":["SJAG_02335","SJAG_01296"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85048,85049],"is_not":false,"summary":null,"term":"MONDO:0007110"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPS19 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01296":null,"SJAG_02335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111895","UMLS:C2676137","OMIM:105650","MEDGEN:390966","MESH:C567302","GARD:15039","NCIT:C176911"],"synonyms":[{"name":"Aase syndrome","type":"related"},{"name":"Aase-Smith syndrome 2","type":"related"},{"name":"Blackfan-Diamond syndrome","type":"related"},{"name":"DBA","type":"broad"},{"name":"DBA1","type":"related"},{"name":"Diamond-Blackfan Anaemia type 1","type":"exact"},{"name":"Diamond-Blackfan Anemia type 1","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPS19","type":"exact"},{"name":"Diamond-Blackfan anemia 1","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPS19","type":"exact"},{"name":"RPS19 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPS19 Diamond-Blackfan anemia","type":"exact"},{"name":"Red cell aplasia, Pure, hereditary","type":"related"},{"name":"anemia, congenital erythroid hypoplastic","type":"related"},{"name":"anemia, congenital hypoplastic, of Blackfan and Diamond","type":"related"},{"name":"aregenerative Anemia, chronic congenital","type":"related"},{"name":"erythrogenesis imperfecta","type":"related"}],"termid":"MONDO:0007110","terms_by_termid":{"MONDO:0007110":null},"xrefs":{"Monarch":{"xref_id":"0007110"}}}


id: GO:0005928
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cell-substrate adherens junction found in the apical region of a cell, such as those found in cuticle-secreting epithelia, which connect the apical membrane to the cuticle.","definition_xrefs":["GOC:mah","PMID:11700298"],"gene_count":0,"genotype_count":0,"name":"obsolete apical hemi-adherens junction (obsolete GO:0005928)","synonyms":[{"name":"apical cell-substrate adherens junction","type":"exact"},{"name":"apical dense plaque","type":"exact"}],"termid":"GO:0005928"}


id: PBO:0027700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_centromeric_DNA_separation","termid":"PBO:0027700"}


id: GO:0070069
data:
  {"annotated_genes":["SJAG_01763","SJAG_00755","SJAG_03490","SJAG_02646","SJAG_05629","SJAG_07006","SJAG_MIT13","SJAG_00976","SJAG_01355","SJAG_01490","SJAG_01077","SJAG_03337","SJAG_MIT20","SJAG_MIT04","SJAG_00080","SJAG_02504","SJAG_01190","SJAG_MIT03","SJAG_00601","SJAG_07007"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103560,117124,118488,114540,117599,103972,112842,107425,89484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045275"},{"annotations":[116261,118461,118510,114900,107743,88735,113668,118483,87712,91457,114099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045277"}]},"cv_name":"cellular_component","definition":"A protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01763":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytochrome complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070069","terms_by_termid":{"GO:0045275":null,"GO:0045277":null}}


id: PBO:0043318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP-Gly domain containing linker protein 1","termid":"PBO:0043318"}


id: GO:0090212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of establishment of blood-brain barrier","termid":"GO:0090210"},{"relation_name":"negatively_regulates","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of blood-brain barrier","synonyms":[{"name":"negative regulation of establishment of BBB","type":"exact"}],"termid":"GO:0090212"}


id: PBO:0027099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tDNA_antisense_small_RNA_level","termid":"PBO:0027099"}


id: GO:0006747
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113554],"is_not":false,"summary":null,"term":"GO:0006747"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of FAD, the oxidized form of flavin-adenine dinucleotide.","definition_xrefs":["PMID:20822113","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD metabolic process","termid":"GO:0046443"},{"relation_name":"is_a","term_name":"flavin adenine dinucleotide biosynthetic process","termid":"GO:0072388"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"FAD biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FAD anabolism","type":"exact"},{"name":"FAD biosynthesis","type":"exact"},{"name":"FAD formation","type":"exact"},{"name":"FAD synthesis","type":"exact"},{"name":"oxidized flavin adenine dinucleotide biosynthesis","type":"exact"},{"name":"oxidized flavin adenine dinucleotide biosynthetic process","type":"exact"},{"name":"oxidized flavin-adenine dinucleotide biosynthesis","type":"exact"},{"name":"oxidized flavin-adenine dinucleotide biosynthetic process","type":"exact"}],"termid":"GO:0006747","terms_by_termid":{"GO:0006747":null}}


id: GO:0019299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhamnose, the hexose 6-deoxy-L-mannose. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"rhamnose metabolic process","synonyms":[{"name":"rhamnose metabolism","type":"exact"}],"termid":"GO:0019299"}


id: GO:0035513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the methyl group from one or more nucleotides within an RNA molecule involving oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:18775698","PMID:16482161","PMID:12594517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"oxidative demethylation","termid":"GO:0070989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidative RNA demethylation","termid":"GO:0035513"}


id: GO:0060977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of blood vessels of the heart are generated and organized. The blood vessel is the vasculature carrying blood.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel morphogenesis","termid":"GO:0048514"},{"relation_name":"part_of","term_name":"coronary vasculature development","termid":"GO:0060976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vasculature morphogenesis","synonyms":[{"name":"cardiac blood vessel morphogenesis","type":"exact"},{"name":"cardiac vasculature morphogenesis","type":"exact"},{"name":"coronary blood vessel morphogenesis","type":"exact"},{"name":"heart blood vessel morphogenesis","type":"exact"},{"name":"heart vasculature morphogenesis","type":"exact"}],"termid":"GO:0060977"}


id: PBO:0002910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc13","termid":"PBO:0002910"}


id: GO:0097680
data:
  {"annotated_genes":["SJAG_04199","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113333,115771],"is_not":false,"summary":null,"term":"GO:0097680"}]},"cv_name":"biological_process","definition":"An instance of double-strand break repair via nonhomologous end joining that requires a number of factors important for V(D)J recombination, including the KU70/80 heterodimer (KU), XRCC4, ligase IV, and DNA-PKcs in mammals. It does not produce translocations (as opposed to the alternative nonhomologous end joining).","definition_xrefs":["GOC:rph","PMID:18584027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair via classical nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-NHEJ","type":"related"},{"name":"canonical nonhomologous end joining","type":"exact"}],"termid":"GO:0097680","terms_by_termid":{"GO:0097680":null}}


id: PBO:0053695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 895","termid":"PBO:0053695"}


id: GO:0046130
data:
  {"annotated_genes":["SJAG_02959","SJAG_02580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87102,87103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any purine ribonucleoside, a nucleoside in which purine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside catabolic process","termid":"GO:0006152"},{"relation_name":"is_a","term_name":"ribonucleoside catabolic process","termid":"GO:0042454"},{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02580":null,"SJAG_02959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside breakdown","type":"exact"},{"name":"purine ribonucleoside catabolism","type":"exact"},{"name":"purine ribonucleoside degradation","type":"exact"}],"termid":"GO:0046130","terms_by_termid":{"GO:0006154":null}}


id: MONDO:0018045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hoyeraal-Hreidarsson syndrome (HHS) is a very rare X-linked recessive disorder considered to be a severe variant of dyskeratosis congenita characterized by intrauterine growth retardation, microcephaly, cerebellar hypoplasia, progressive combined immune deficiency and aplastic anemia.","definition_xrefs":["Orphanet:3322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita, X-linked","termid":"MONDO:0010584"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0005093"],"is_obsolete":false,"name":"Hoyeraal-Hreidarsson syndrome","secondary_identifiers":["MEDGEN:337518","icd11.foundation:340127408","GARD:346","SCTID:707276009","UMLS:C1846142","MESH:C536068"],"synonyms":[{"name":"Growth retardation prenatal with progressive pancytopenia and cerebellar hypoplasia","type":"related"},{"name":"Hoyeraal Hreidarsson syndrome","type":"related"},{"name":"progressive pancytopenia-immunodeficiency-cerebellar hypoplasia syndrome","type":"exact"}],"termid":"MONDO:0018045","xrefs":{"Monarch":{"xref_id":"0018045"}}}


id: GO:1901146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in mesonephric nephron morphogenesis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}


id: PBO:0076921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor B2, mitochondrial","termid":"PBO:0076921"}


id: PBO:0003573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Sol1","termid":"PBO:0003573"}


id: GO:0002573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage.","definition_xrefs":["GOC:add","PMID:16551251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte differentiation","termid":"GO:0002521"},{"relation_name":"is_a","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid leukocyte differentiation","synonyms":[{"name":"myeloid leucocyte differentiation","type":"exact"}],"termid":"GO:0002573"}


id: PBO:0109024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA1 neighbor of OC90","termid":"PBO:0109024"}


id: FYECO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing fructose as the carbon source, yeast extract and other components. The concentration of fructose is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose YE","synonyms":[{"name":"fructose rich medium","type":"broad"}],"termid":"FYECO:0000427"}


id: PBO:0047335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 1","termid":"PBO:0047335"}


id: PBO:0063039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 6","termid":"PBO:0063039"}


id: PBO:0083730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential alpha-kleisin subunit of the cohesin complex; required for sister chromatid cohesion in mitosis; subject to proteolytic cleavage by separase Esp1p, resulting in dissociation of cohesin from chromatin and the separation of sister chromatids at the mitotic metaphase-to-anaphase transition; apoptosis induces cleavage and translocation of a C-terminal fragment to mitochondria; expression peaks in S phase","termid":"PBO:0083730"}


id: PBO:0073625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIGLEC10 antisense RNA 1","termid":"PBO:0073625"}


id: GO:0043447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2.","definition_xrefs":["Wikipedia:Alkane","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkane biosynthetic process","synonyms":[{"name":"alkane anabolism","type":"exact"},{"name":"alkane biosynthesis","type":"exact"},{"name":"alkane formation","type":"exact"},{"name":"alkane synthesis","type":"exact"}],"termid":"GO:0043447"}


id: PBO:0040138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 1","termid":"PBO:0040138"}


id: MONDO:0012910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"presbycusis","termid":"MONDO:0043765"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age-related hearing impairment 1","secondary_identifiers":["UMLS:C2676230","MESH:C567305","OMIM:612448","MEDGEN:382794"],"synonyms":[{"name":"ARHI1","type":"exact"},{"name":"age-related hearing impairment 1","type":"exact"},{"name":"presbycusis 1","type":"related"}],"termid":"MONDO:0012910","xrefs":{"Monarch":{"xref_id":"0012910"}}}


id: PBO:0072307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 4","termid":"PBO:0072307"}


id: GO:0098006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral genome within the capsid where DNA is packaged into the capsid until the capsid is full.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome packaging","termid":"GO:0019073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral DNA genome packaging, headful","synonyms":[{"name":"phage headful packaging","type":"narrow"}],"termid":"GO:0098006"}


id: GO:0048927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a posterior lateral line neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.","definition_xrefs":["ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast support cell differentiation","termid":"GO:0048889"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast support cell differentiation","termid":"GO:0048927"}


id: GO:0090573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase IV promoter.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase IV transcription repressor complex","termid":"GO:0090573"}


id: MOD:00931
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other - BHTOH is formed upon metabolism of BHT with P450 enzymes. The BHTOH is further metabolized to its quinone methide (electrophile) which reacts with -SH and -NH2 groups","definition_xrefs":["PubMed:11085420","Unimod:498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of t-butyl hydroxylated BHT (BHTOH) to C, H or K","synonyms":[{"name":"BHTOH","type":"related"},{"name":"Michael addition of t-butyl hydroxylated BHT (BHTOH) to C, H or K","type":"related"}],"termid":"MOD:00931"}


id: GO:1902789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isooctane stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","PMID:22328008","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to isooctane","termid":"GO:1902788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to isooctane","termid":"GO:1902789"}


