# terms

id: PBO:0042145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 4 like 1","termid":"PBO:0042145"}


id: PBO:0003164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc1","termid":"PBO:0003164"}


id: GO:0070922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a single-stranded small RNA is incorporated within the RNA-initiated silencing complex (RISC). The assembly includes the maturation of the small RNA, the stabilization of the complex by accessory proteins of the RISC complex, duplex separation and the release of the second strand, forming a base-pairing complement complex that mediates gene silencing by small RNA.","definition_xrefs":["PMID:14512631","PMID:27184117","PMID:19239886","PMID:14744438","PMID:22233755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"RISC complex assembly","secondary_identifiers":["GO:0035087","GO:0070923","GO:0035280"],"synonyms":[{"name":"RISC assembly","type":"related"},{"name":"gene silencing by RNA, small RNA loading onto RISC","type":"related"},{"name":"miRISC assembly","type":"broad"},{"name":"miRNA loading onto RISC","type":"narrow"},{"name":"siRNA loading onto RISC involved in RNA interference","type":"narrow"},{"name":"siRNA loading onto RISC involved in gene silencing by small RNA","type":"narrow"},{"name":"small RNA loading onto RISC","type":"related"}],"termid":"GO:0070922"}


id: PBO:0038918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5 pseudogene 2","termid":"PBO:0038918"}


id: MOD:01711
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance groups.","definition_xrefs":["Unimod:214#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent alpha-amino acylated residue","termid":"MOD:01708"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01711"}


id: PBO:0075357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 5","termid":"PBO:0075357"}


id: PBO:0071377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL30 antisense RNA 1","termid":"PBO:0071377"}


id: GO:0042851
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid.","definition_xrefs":["GOC:jsg","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-alanine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-alanine metabolism","type":"exact"}],"termid":"GO:0042851","terms_by_termid":{"GO:0042853":null}}


id: PBO:0043122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circadian associated repressor of transcription","termid":"PBO:0043122"}


id: GO:1900417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:20404084","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transmembrane transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900417)","termid":"GO:1900417"}


id: MONDO:0009123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare primary monoamine neurotransmitter synthesis disorder with norepinephrine and adrenaline deficiency that leads to young-onset severe orthostatic hypotension and eyelid ptosis.","definition_xrefs":["Orphanet:230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of catecholamine synthesis","termid":"MONDO:0017759"},{"relation_name":"is_a","term_name":"inherited orthostatic hypotension","termid":"MONDO:0021272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"orthostatic hypotension 1","secondary_identifiers":["UMLS:C4746777","GARD:1903","MEDGEN:1648402","OMIM:223360","DOID:0090145","ICD9:270.8","MESH:C535600","NANDO:2200597","SCTID:237923004"],"synonyms":[{"name":"congenital dopamine beta-hydroxylase deficiency","type":"exact"},{"name":"dopamine BETA-HYDROXYLASE deficiency, congenital","type":"related"},{"name":"dopamine beta hydroxylase deficiency","type":"related"},{"name":"dopamine beta-hydroxylase deficiency","type":"exact"},{"name":"noradrenaline deficiency","type":"exact"},{"name":"norepinephrine deficiency","type":"exact"},{"name":"orthostatic hypotension 1, due to DBH deficiency","type":"exact"}],"termid":"MONDO:0009123","xrefs":{"Monarch":{"xref_id":"0009123"}}}


id: GO:0032706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-22 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-22 production","termid":"GO:0032666"},{"relation_name":"negatively_regulates","term_name":"interleukin-22 production","termid":"GO:0032626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-22 production","secondary_identifiers":["GO:0045394"],"synonyms":[{"name":"down regulation of interleukin-22 production","type":"exact"},{"name":"down-regulation of interleukin-22 production","type":"exact"},{"name":"downregulation of interleukin-22 production","type":"exact"},{"name":"inhibition of interleukin-22 production","type":"narrow"},{"name":"negative regulation of IL-22 production","type":"exact"},{"name":"negative regulation of interleukin-22 biosynthetic process","type":"narrow"}],"termid":"GO:0032706"}


id: GO:1990147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a talin, a family of related cytoskeletal proteins that play a role in assembly of actin filaments and migration of various cell types.","definition_xrefs":["PMID:23372168","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008092","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"talin binding","termid":"GO:1990147"}


id: PBO:0069686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 965, pseudogene","termid":"PBO:0069686"}


id: PBO:0040300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP2B2 intronic transcript 2","termid":"PBO:0040300"}


id: PBO:0048600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ghrelin and obestatin prepropeptide","termid":"PBO:0048600"}


id: MONDO:0001452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral retinal degeneration","termid":"MONDO:0001451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pseudoretinitis pigmentosa","secondary_identifiers":["DOID:12162","UMLS:C2053820","SCTID:193396007","ICD9:362.65","MEDGEN:781175"],"synonyms":[{"name":"secondary pigmentary degeneration of retina","type":"exact"},{"name":"secondary pigmentary retinal degeneration","type":"exact"}],"termid":"MONDO:0001452","xrefs":{"Monarch":{"xref_id":"0001452"}}}


id: PBO:0044541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DXZ4 associated non-coding transcript 2, distal","termid":"PBO:0044541"}


id: PBO:0081166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFX antisense RNA 1","termid":"PBO:0081166"}


id: GO:0051001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of the enzyme nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monooxygenase activity","termid":"GO:0032769"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase activity","termid":"GO:0050999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric-oxide synthase activity","synonyms":[{"name":"NOS inhibitor","type":"narrow"},{"name":"down regulation of nitric-oxide synthase activity","type":"exact"},{"name":"down-regulation of nitric-oxide synthase activity","type":"exact"},{"name":"downregulation of nitric-oxide synthase activity","type":"exact"},{"name":"inhibition of nitric-oxide synthase activity","type":"narrow"},{"name":"negative regulation of NOS activity","type":"exact"},{"name":"nitric-oxide synthase inhibitor","type":"narrow"}],"termid":"GO:0051001"}


id: PBO:0073291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 13","termid":"PBO:0073291"}


id: GO:1905562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular endothelial cell proliferation.","definition_xrefs":["GOC:nc","GOC:BHF_telomere","GOC:BHF","PMID:23201774","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"regulates","term_name":"vascular endothelial cell proliferation","termid":"GO:0101023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular endothelial cell proliferation","termid":"GO:1905562"}


id: GO:0007508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larval heart over time, from its formation to the mature structure. In Drosophila the larval heart (dorsal vessel) is a continuous tube of mesodormal cells that runs beneath the dorsal midline of the epidermis, divided into an anterior aorta and a posterior heart proper.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart development","termid":"GO:0007507"},{"relation_name":"part_of","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval heart development","termid":"GO:0007508"}


id: PBO:0052119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily D member 2","termid":"PBO:0052119"}


id: MONDO:0043373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sensorineural hearing loss which develops suddenly over a period of hours or a few days. It varies in severity from mild to total deafness. Sudden deafness can be due to head trauma, vascular diseases, infections, or can appear without obvious cause or warning.","definition_xrefs":["MESH:D003639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sudden hearing loss disorder","termid":"MONDO:0020677"},{"relation_name":"is_a","term_name":"sensorineural hearing loss disorder","termid":"MONDO:0020678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden sensorineural hearing loss","secondary_identifiers":["UMLS:C4275242","SCTID:715239002","GARD:12927","Orphanet:90059","MEDGEN:907022"],"synonyms":[{"name":"acute sensorineural hearing loss by acute acoustic trauma or sudden deafness or surgery induced acoustic trauma","type":"related"},{"name":"deafness, sudden","type":"related"},{"name":"sudden deafness","type":"related"},{"name":"sudden hearing loss","type":"broad"},{"name":"sudden sensorineural hearing loss","type":"exact"}],"termid":"MONDO:0043373","xrefs":{"Monarch":{"xref_id":"0043373"}}}


id: PBO:0046386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EOLA2 divergent transcript","termid":"PBO:0046386"}


id: GO:1900622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Calcium-mediated signaling that results in positive regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:9407035","GOC:dgf","GOC:bf","GOC:BHF","GOC:TermGenie","PMID:9407036"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling (obsolete GO:1900622)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"calcineurin-dependent transcription activation","type":"narrow"},{"name":"calcineurin-dependent transcriptional induction","type":"narrow"},{"name":"calcineurin-mediated activation of transcription","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter by calcium-mediated signaling","type":"related"},{"name":"positive regulation of transcription from Pol II promoter by calcium-mediated signaling","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global by calcium-mediated signaling","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"}],"termid":"GO:1900622"}


id: GO:0070968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyrroloquinoline quinone, PQQ, the coenzyme or the prosthetic group of certain alcohol dehydrogenases and glucose dehydrogenases.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyrroloquinoline quinone binding","synonyms":[{"name":"PQQ binding","type":"exact"}],"termid":"GO:0070968"}


id: GO:0052585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a quinone or similar compound.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH2 group of donors, with a quinone or similar compound as acceptor (obsolete GO:0052585)","termid":"GO:0052585"}


id: GO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature B cell during an immune response, resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"},{"relation_name":"is_a","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell activation involved in immune response","synonyms":[{"name":"B cell activation during immune response","type":"related"},{"name":"B lymphocyte activation during immune response","type":"related"},{"name":"B-cell activation during immune response","type":"related"},{"name":"B-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002312"}


id: PBO:0034046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_similarity_relationship_with","termid":"PBO:0034046"}


id: GO:1901854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 5,6,7,8-tetrahydrosarcinapterin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"tricarboxylic acid catabolic process","termid":"GO:0072352"},{"relation_name":"is_a","term_name":"5,6,7,8-tetrahydrosarcinapterin metabolic process","termid":"GO:1901853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"5,6,7,8-tetrahydrosarcinapterin catabolic process","synonyms":[{"name":"5,6,7,8-tetrahydrosarcinapterin breakdown","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin catabolism","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin degradation","type":"exact"}],"termid":"GO:1901854"}


id: SO:1001249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by domain similarity.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"supported_by_domain_match","termid":"SO:0000908"},{"relation_name":"is_a","term_name":"CDS_supported_by_sequence_similarity_data","termid":"SO:1001251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_domain_match_data","synonyms":[{"name":"CDS supported by domain match data","type":"exact"}],"termid":"SO:1001249"}


id: GO:0016358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.","definition_xrefs":["GOC:jl","GOC:aruk","GOC:bc","PMID:22683681","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite development","termid":"GO:0016358"}


id: PBO:0079459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-golgi network vesicle protein 23 homolog A","termid":"PBO:0079459"}


id: MONDO:0001179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yellowish thickened lesion on the conjunctiva near the cornea representing a benign degenerative change in the conjunctiva caused by the leakage and deposition of certain blood proteins through the permeable capillaries near the limbus.","definition_xrefs":["MESH:D059407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival degeneration","termid":"MONDO:0000949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pinguecula","secondary_identifiers":["MEDGEN:56273","EFO:1001824","SCTID:87614000","ICD9:372.51","DOID:11029","UMLS:C0152255"],"termid":"MONDO:0001179","xrefs":{"Monarch":{"xref_id":"0001179"}}}


id: PBO:0045778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial cell transforming 2","termid":"PBO:0045778"}


id: PBO:0034657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_3'_overhang_length","termid":"PBO:0034657"}


id: PBO:0049743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit gamma 1","termid":"PBO:0049743"}


id: MONDO:0971127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"diffuse unilateral subacute neuroretinitis","secondary_identifiers":["Orphanet:674947"],"termid":"MONDO:0971127","xrefs":{"Monarch":{"xref_id":"0971127"}}}


id: PBO:0056842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056842"}


id: MONDO:0007315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cherubism is a rare, self-limiting, fibro-osseous, genetic disease of childhood and adolescence characterized by varying degrees of progressive bilateral enlargement of the mandible and/or maxilla, with clinical repercussions in severe cases.","definition_xrefs":["Orphanet:184"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"cherubism","secondary_identifiers":["MEDGEN:40219","icd11.foundation:1729261719","ICD9:526.89","OMIM:118400","DOID:1856","NCIT:C84630","GARD:6036","UMLS:C0008029","NANDO:2200444","MESH:D002636","MedDRA:10070535","SCTID:76098004"],"synonyms":[{"name":"CRBM","type":"exact"},{"name":"Crbm","type":"related"},{"name":"cherubism","type":"exact"},{"name":"familial fibrous dysplasia of the jaws","type":"exact"},{"name":"familial multilocular cystic disease of the jaws","type":"exact"}],"termid":"MONDO:0007315","xrefs":{"Monarch":{"xref_id":"0007315"}}}


id: PBO:0079664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 12","termid":"PBO:0079664"}


id: GO:0008882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [L-glutamate:ammonia ligase (ADP-forming)] = diphosphate + adenylyl-[L-glutamate:ammonia ligase (ADP-forming)].","definition_xrefs":["EC:2.7.7.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"[glutamate-ammonia-ligase] adenylyltransferase activity","secondary_identifiers":["MetaCyc:GSADENYLATION-RXN","RHEA:18589"],"synonyms":[{"name":"ATP:L-glutamate:ammonia ligase (ADP-forming) adenylyltransferase activity","type":"related"},{"name":"ATP:[glutamate-ammonia-ligase] adenylyltransferase activity","type":"exact"},{"name":"ATP:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"adenosine triphosphate:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"glutamate-ammonia-ligase adenylyltransferase activity","type":"exact"},{"name":"glutamine-synthetase adenylyltransferase activity","type":"related"}],"termid":"GO:0008882"}


id: GO:0110044
data:
  {"annotated_genes":["SJAG_03486","SJAG_03371","SJAG_04332","SJAG_04682","SJAG_03501","SJAG_02404","SJAG_03048","SJAG_00457","SJAG_05288","SJAG_01401","SJAG_01311","SJAG_02723","SJAG_04813"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94049,101114,101876,104385,108506],"is_not":false,"summary":null,"term":"GO:0110044"},{"annotations":[105280,105438,106115,117801,103926,108724,101852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110045"},{"annotations":[115930,117667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140648"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["GOC:al","PMID:17674143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_04332":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sexual differentiation","type":"related"}],"termid":"GO:0110044","terms_by_termid":{"GO:0110044":null,"GO:0110045":null,"GO:0140648":null}}


id: PBO:0004749
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome DISjunction","termid":"PBO:0004749"}


id: GO:0071203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that localizes at the surface of endosomes, where it recruits and activates the Arp2/3 complex to induce actin polymerization. In human, the WASH complex is composed of F-actin-capping protein subunits alpha and beta, WASH1, FAM21, KIAA1033, KIAA0196 and CCDC53.","definition_xrefs":["GOC:sp","PMID:19922875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"WASH complex","termid":"GO:0071203"}


id: PBO:0036532
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ3 with an S. pombe MTS","termid":"PBO:0036532"}


id: GO:2000852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of corticosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"regulates","term_name":"corticosterone secretion","termid":"GO:0035934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of corticosterone secretion","termid":"GO:2000852"}


id: PBO:0038482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 7","termid":"PBO:0038482"}


id: PBO:0004463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp3 (predicted)","termid":"PBO:0004463"}


id: GO:0008688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(3-hydroxyphenyl)propionate + NADH + oxygen + H+ = 3-(2,3-dihydroxyphenyl)propionate + NAD+ + H2O.","definition_xrefs":["RHEA:24785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propionate hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R06786","MetaCyc:MHPHYDROXY-RXN","EC:1.14.13.127"],"termid":"GO:0008688"}


id: PBO:0052880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-2","termid":"PBO:0052880"}


id: PBO:0040983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 1","termid":"PBO:0040983"}


id: PATO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000054 absolute number (obsolete PATO:0000054)","termid":"PATO:0000054"}


id: GO:1901639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of XDP.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete XDP catabolic process (obsolete GO:1901639)","synonyms":[{"name":"XDP breakdown","type":"exact"},{"name":"XDP catabolism","type":"exact"},{"name":"XDP degradation","type":"exact"}],"termid":"GO:1901639"}


id: GO:0006636
data:
  {"annotated_genes":["SJAG_03943","SJAG_00099"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69796,113844],"is_not":false,"summary":null,"term":"GO:0006636"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an unsaturated fatty acid, any fatty acid containing one or more double bonds between carbon atoms.","definition_xrefs":["GOC:mah","MetaCyc:PWY-762","MetaCyc:PWY-782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"unsaturated fatty acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid desaturation","type":"related"},{"name":"polyunsaturated fatty acid biosynthesis","type":"narrow"},{"name":"unsaturated fatty acid anabolism","type":"exact"},{"name":"unsaturated fatty acid biosynthesis","type":"exact"},{"name":"unsaturated fatty acid formation","type":"exact"},{"name":"unsaturated fatty acid synthesis","type":"exact"}],"termid":"GO:0006636","terms_by_termid":{"GO:0006636":null}}


id: MONDO:0006342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian squamous cell carcinoma (obsolete MONDO:0006342)","termid":"MONDO:0006342","xrefs":{"Monarch":{"xref_id":"0006342"}}}


id: GO:0003272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart","PMID:15797462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion formation","termid":"GO:0003272"}


id: FYPO:0005808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of movement of one or more proteins within the plasma membrane of a spore is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein movement within plasma membrane","termid":"FYPO:0005807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of protein movement within spore plasma membrane","termid":"FYPO:0005808"}


id: GO:1902362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a melanocyte, the main structural component of the epidermis.","definition_xrefs":["PMID:20530876","GOC:TermGenie","GOC:ic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanocyte apoptotic process","synonyms":[{"name":"melanocyte apoptosis","type":"narrow"},{"name":"melanophore apoptosis","type":"narrow"},{"name":"melanophore apoptotic process","type":"narrow"}],"termid":"GO:1902362"}


id: PBO:0080405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS35 pseudogene 1","termid":"PBO:0080405"}


id: GO:0043526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss.","definition_xrefs":["PMID:15905876","PMID:11909981","PMID:10208444","GOC:mtg_apoptosis","MSH:D017209"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroprotection (obsolete GO:0043526)","secondary_identifiers":["Wikipedia:Neuroprotection"],"synonyms":[{"name":"neuroprotection","type":"exact"}],"termid":"GO:0043526"}


id: PBO:0074678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 62","termid":"PBO:0074678"}


id: MOD:00326
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-pyrrolysine (not known as a natural, post-translational modification process).","definition_xrefs":["Unimod:435#K","PubMed:12029132","PubMed:15314242","PubMed:16096277","PubMed:11435424","PubMed:12029131","RESID:AA0321#LYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"L-pyrrolysine residue","termid":"MOD:01187"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pyrrolysine (Lys)","synonyms":[{"name":"(2S)-2-amino-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]aminohexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]azanylhexanoic acid","type":"exact"},{"name":"L-pyrrolysine","type":"exact"},{"name":"N6-(4-methyl-1,2-didehydropyrrolidine-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-(4-methyl-delta-1-pyrroline-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-([(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl)-L-lysine","type":"exact"},{"name":"NON_STD Pyrrolysine","type":"exact"},{"name":"Pyl(Lys)","type":"exact"},{"name":"monomethylamine methyltransferase cofactor lysine adduct","type":"exact"}],"termid":"MOD:00326"}


id: GO:1900004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of serine-type endopeptidase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endopeptidase activity","termid":"GO:0010951"},{"relation_name":"is_a","term_name":"regulation of serine-type endopeptidase activity","termid":"GO:1900003"},{"relation_name":"is_a","term_name":"negative regulation of serine-type peptidase activity","termid":"GO:1902572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of serine-type endopeptidase activity","synonyms":[{"name":"down regulation of blood coagulation factor activity","type":"related"},{"name":"down regulation of serine-type endopeptidase activity","type":"related"},{"name":"negative regulation of blood coagulation factor activity","type":"related"}],"termid":"GO:1900004"}


id: PBO:0075213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin gamma 1","termid":"PBO:0075213"}


id: PATO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001033 stiffness (obsolete PATO:0001033)","termid":"PATO:0001033"}


id: GO:0044666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that can methylate lysine-4 of histone H3, and which contains either of the protein subunits MLL3 or MLL4 in mammals, or equivalent in other species.","definition_xrefs":["GOC:sart","PMID:21875999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"MLL3/4 complex","synonyms":[{"name":"Trr/COMPASS-like complex","type":"exact"}],"termid":"GO:0044666"}


id: GO:0051334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reformation of the nuclear membranes during meiosis I.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane reassembly","termid":"GO:0051333"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0044085","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"meiosis I nuclear membrane reassembly","synonyms":[{"name":"meiosis I nuclear envelope reassembly","type":"related"}],"termid":"GO:0051334"}


id: PBO:0087237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sequence-specific DNA binding protein; binds to a sequence motif associated with distinct genomic hotspots of non-H2B protein ubiquitylation (ub-hotspots); interacts with Slx5p to recruit the Slx5-Slx8  SUMO-targeted Ub ligase (STUbL) complex to ub-hotspots; deletion prevents ub-hotspot formation and exacerbates heat sensitivity of cells deficient in Rpd3L histone deacetylase complex members; forms nuclear foci upon DNA replication stress","termid":"PBO:0087237"}


id: FYPO:0005625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to ultraviolet light during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal viability following cellular response to UV","termid":"FYPO:0004662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal viability following cellular response to UV during mitotic S phase","synonyms":[{"name":"normal cell population viability following cellular response to UV during mitotic S phase","type":"exact"},{"name":"normal viability following UV exposure during mitotic S phase","type":"exact"},{"name":"normal viability following cellular response to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"normal viability following cellular response to ultraviolet light during mitotic S phase","type":"exact"}],"termid":"FYPO:0005625"}


id: PBO:0011126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin homolog Far8 (predicted)","termid":"PBO:0011126"}


id: PBO:0045043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 3","termid":"PBO:0045043"}


id: GO:0071403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high density lipoprotein particle stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to high density lipoprotein particle stimulus","secondary_identifiers":["GO:0055099"],"synonyms":[{"name":"cellular response to high-density lipoprotein particle stimulus","type":"exact"},{"name":"response to high density lipoprotein particle","type":"broad"},{"name":"response to high density lipoprotein particle stimulus","type":"broad"}],"termid":"GO:0071403"}


id: GO:0060107
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The extracellular matrix that is a regularly spaced circumferential ridge present in the cortical region of the cuticle. Annuli are delineated by annular furrows and are present throughout the cuticle with the exception of lateral regions where longitudinal alae are present.","definition_xrefs":["GOC:kmv","ISSN:15518507","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cortical layer of collagen and cuticulin-based cuticle extracellular matrix","termid":"GO:0060106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"annuli extracellular matrix","synonyms":[{"name":"annulae","type":"related"},{"name":"annular rings","type":"related"},{"name":"annule(s)","type":"related"},{"name":"annulus","type":"related"}],"termid":"GO:0060107"}


id: PBO:0013781
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by T. reesei dpm1","termid":"PBO:0013781"}


id: FYPO:0001893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which azygotic asci that contain more or fewer than four spores form following conjugation, diploid growth, and subsequent azygotic sporulation. Azygotic ascus formation occurs when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PomBase:mah","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","termid":"FYPO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000121"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of azygotic ascus with more or fewer than four spores","synonyms":[{"name":"abnormal sporulation resulting in formation of azygotic asci with more or fewer than four spores","type":"exact"},{"name":"sporulation defects, azygotic asci with more or fewer than four spores","type":"exact"}],"termid":"FYPO:0001893"}


id: MONDO:1010444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiomyopathy that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy, goat","secondary_identifiers":["OMIA:000160-9925"],"termid":"MONDO:1010444","xrefs":{"Monarch":{"xref_id":"1010444"}}}


id: PBO:0056710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 2","termid":"PBO:0056710"}


id: PBO:0087459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric guanine nucleotide exchange factor (GEF); subunit of the Mon1-Ccz1 GEF complex which stimulates nucleotide exchange and activation of Ypt7p, a Rab family GTPase involved in membrane tethering and fusion events at the late endosome and vacuole; GEF activity is stimulated by membrane association and anionic phospholipids; role in localizing Ypt7p to the vacuolar membrane; required for autophagy, the CVT pathway and mitophagy; potential Cdc28 substrate","termid":"PBO:0087459"}


id: PBO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.67","termid":"PBO:0001120"}


id: GO:1905382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snRNA transcription mediated by RNA polymerase II.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:10022900","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of snRNA transcription by RNA polymerase II","termid":"GO:1905380"},{"relation_name":"positively_regulates","term_name":"snRNA transcription by RNA polymerase II","termid":"GO:0042795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0006355","GO:0016073","GO:0010467"],"is_obsolete":false,"name":"positive regulation of snRNA transcription by RNA polymerase II","synonyms":[{"name":"activation of snRNA transcription from Pol II promoter","type":"narrow"},{"name":"activation of snRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"up-regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"upregulation of snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1905382"}


id: MONDO:0859233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa, junctional 6, with pyloric atresia","secondary_identifiers":["MEDGEN:1803348","UMLS:C5676957","OMIM:619817"],"termid":"MONDO:0859233","xrefs":{"Monarch":{"xref_id":"0859233"}}}


id: GO:0098923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by an soluble gas ligand.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling","termid":"GO:0098917"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by soluble gas","termid":"GO:0098923"}


id: PBO:0053514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 502","termid":"PBO:0053514"}


id: FYPO:0002846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and small vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and small cells (obsolete FYPO:0002846)","termid":"FYPO:0002846"}


id: GO:0102308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + erythromycin D = S-adenosyl-L-homocysteine + erythromycin B + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete erythromycin D 3''-o-methyltransferase activity (obsolete GO:0102308)","termid":"GO:0102308"}


id: PBO:0036424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Aha1","termid":"PBO:0036424"}


id: PR:O74525
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC70.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C70.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.04c","synonyms":[{"name":"Spom972h-SPCC70.04c","type":"exact"}],"termid":"PR:O74525"}


id: PBO:0089949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase Bpl1","termid":"PBO:0089949"}


id: PBO:0042287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD2 associated protein","termid":"PBO:0042287"}


id: PBO:0072654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 8A","termid":"PBO:0072654"}


id: PBO:0017622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0136 family mitochondrial protein, implicated in heme biosynthesis","termid":"PBO:0017622"}


id: MONDO:0014826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nucleoside diphosphate-linked moiety X Motif 15 deficiency (obsolete MONDO:0014826)","secondary_identifiers":["OMIM:616903"],"synonyms":[{"name":"NUDT15D","type":"exact"},{"name":"Nudt15 deficiency","type":"related"},{"name":"THIOPURINES, poor metabolism OF, 2","type":"related"},{"name":"THPM2","type":"related"},{"name":"Thiopurines, poor metabolism Of, 2","type":"related"},{"name":"nucleoside diphosphate-linked moiety X Motif 15 deficiency","type":"exact"},{"name":"nucleoside diphosphate-linked moiety X Motif 15 deficiency; NUDT15D","type":"exact"}],"termid":"MONDO:0014826","xrefs":{"Monarch":{"xref_id":"0014826"}}}


id: GO:1900285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"cellotriose transport","termid":"GO:2001096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of cellotriose transport","termid":"GO:1900285"}


id: MONDO:0014605
data:
  {"annotated_genes":["SJAG_00229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84810],"is_not":false,"summary":null,"term":"MONDO:0014605"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Houge-Janssens syndrome","termid":"MONDO:0957553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Houge-Janssens syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070066","GARD:17803","MEDGEN:899880","Orphanet:457284","UMLS:C4225352","OMIM:616362"],"synonyms":[{"name":"MRD36","type":"exact"},{"name":"autosomal dominant intellectual disability 36","type":"exact"},{"name":"autosomal dominant mental retardation 36","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 36","type":"related"},{"name":"intellectual disability, autosomal dominant 36","type":"related"},{"name":"intellectual disability, autosomal dominant type 36","type":"exact"},{"name":"mental retardation, autosomal dominant 36","type":"related"},{"name":"mental retardation, autosomal dominant type 36","type":"exact"},{"name":"microcephaly-corpus callosum hypoplasia-intellectual disability-facial dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0014605","terms_by_termid":{"MONDO:0014605":null},"xrefs":{"Monarch":{"xref_id":"0014605"}}}


id: PBO:0058601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6733","termid":"PBO:0058601"}


id: MOD:00970
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-hydroxy-allysine (Lys)","termid":"MOD:00970"}


id: PBO:0085966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overproduction blocks cell cycle arrest in the presence of mating pheromone; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085966"}


id: PBO:0045136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAAF4-CCPG1 readthrough (NMD candidate)","termid":"PBO:0045136"}


id: MONDO:0020111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete constitutional megaloblastic anemia due to folate metabolism disorder (obsolete MONDO:0020111)","secondary_identifiers":["Orphanet:98408"],"termid":"MONDO:0020111","xrefs":{"Monarch":{"xref_id":"0020111"}}}


id: GO:1903782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion import across the plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:nc","PMID:19376779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"},{"relation_name":"regulates","term_name":"sodium ion import across plasma membrane","termid":"GO:0098719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of sodium ion import across plasma membrane","termid":"GO:1903782"}


id: GO:0045481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-endo-hydroxycineole + NAD+ = 6-oxocineole + H+ + NADH.","definition_xrefs":["EC:1.1.1.241","RHEA:11736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-endo-hydroxycineole dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02994","MetaCyc:6-ENDO-HYDROXYCINEOLE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"6-endo-hydroxycineole:NAD+ 6-oxidoreductase activity","type":"related"}],"termid":"GO:0045481"}


id: PBO:0079571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B pseudogene 3","termid":"PBO:0079571"}


id: MONDO:0024277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia","termid":"MONDO:0002049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"neonatal thrombocytopenia","secondary_identifiers":["SCTID:82835005","MESH:D054098","MEDGEN:526130","UMLS:C0221028"],"synonyms":[{"name":"neonatal purpura","type":"related"},{"name":"neonatal thrombocytopenia","type":"exact"},{"name":"purpura of newborn","type":"related"}],"termid":"MONDO:0024277","xrefs":{"Monarch":{"xref_id":"0024277"}}}


id: PBO:0086614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086614"}


id: PBO:0054711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2120","termid":"PBO:0054711"}


id: GO:0046328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"regulates","term_name":"JNK cascade","termid":"GO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of JNK cascade","synonyms":[{"name":"regulation of SAPK cascade","type":"broad"}],"termid":"GO:0046328"}


id: SO:0001349
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_thiouridine","secondary_identifiers":["RNAMOD:057"],"synonyms":[{"name":"2-thiouridine","type":"exact"},{"name":"s2U","type":"exact"},{"name":"two thiouridine","type":"exact"}],"termid":"SO:0001349"}


id: GO:0032821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell proliferation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell proliferation","termid":"GO:0032818"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation involved in immune response","termid":"GO:0032820"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"natural killer cell proliferation involved in immune response","termid":"GO:0002324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell proliferation involved in immune response","synonyms":[{"name":"down regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"down-regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"downregulation of natural killer cell proliferation during immune response","type":"related"},{"name":"inhibition of natural killer cell proliferation during immune response","type":"narrow"},{"name":"negative regulation of NK cell proliferation during immune response","type":"related"},{"name":"negative regulation of natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0032821"}


id: MONDO:0024568
data:
  {"annotated_genes":["SJAG_02015"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85453],"is_not":false,"summary":null,"term":"MONDO:0024568"}]},"cv_name":"mondo","definition":"Any infantile liver failure in which the cause of the disease is a mutation in the LARS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile liver failure","termid":"MONDO:0000023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"infantile liver failure syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615438","Orphanet:370088","DOID:0080717","MEDGEN:815852","UMLS:C3809522","GARD:13114"],"synonyms":[{"name":"ILFS1","type":"related"},{"name":"LARS infantile liver failure","type":"exact"},{"name":"Lars infantile liver failure","type":"exact"},{"name":"acute infantile liver failure - multisystemic involvement syndrome","type":"related"},{"name":"infantile liver failure caused by mutation in LARS","type":"exact"},{"name":"infantile liver failure caused by mutation in Lars","type":"exact"},{"name":"infantile liver failure syndrome 1","type":"exact"},{"name":"infantile liver failure syndrome type 1","type":"exact"}],"termid":"MONDO:0024568","terms_by_termid":{"MONDO:0024568":null},"xrefs":{"Monarch":{"xref_id":"0024568"}}}


id: GO:0072751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-thialysine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"response to L-thialysine","termid":"GO:1901345"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-thialysine","synonyms":[{"name":"cellular response to thialysine","type":"broad"}],"termid":"GO:0072751"}


id: FYPO:0007685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is increased relative to normal under conditions of starvation for one or more nutrients.","definition_xrefs":["PomBase:mah","PMID:33574613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002057","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"increased vegetative cell population growth during nutrient starvation","synonyms":[{"name":"fast vegetative cell population growth during nutrient starvation","type":"narrow"},{"name":"increased vegetative cell population growth during nutrient depletion","type":"exact"},{"name":"increased vegetative cell population growth during nutrient deprivation","type":"exact"},{"name":"increased vegetative cell population growth during nutrient limitation","type":"exact"},{"name":"increased vegetative cell population growth in response to nutrient starvation","type":"exact"},{"name":"resistant to nutrient starvation","type":"related"}],"termid":"FYPO:0007685"}


id: GO:0106196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic anions linked to the hydrolysis of a nucleoside triphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic anions linked to the hydrolysis of a nucleoside triphosphate (obsolete GO:0106196)","termid":"GO:0106196"}


id: FYPO:0007655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at one or more specific sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:33511417","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"increased nucleosome occupancy","synonyms":[{"name":"increased nucleosome occupancy during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy during vegetative growth","type":"exact"}],"termid":"FYPO:0007655"}


id: PBO:0005403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase (predicted)","termid":"PBO:0005403"}


id: PBO:0059593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 5","termid":"PBO:0059593"}


id: PATO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A moderate yellow-orange to orange color.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow orange","termid":"PATO:0001944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ochre","termid":"PATO:0001945"}


id: PR:G2TRU8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.06c","synonyms":[{"name":"Spom972h-wtf17","type":"exact"}],"termid":"PR:G2TRU8"}


id: MONDO:0012121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 5","secondary_identifiers":["MEDGEN:325168","MESH:C563858","OMIM:608787","DOID:0060924","UMLS:C1837422"],"synonyms":[{"name":"OTSC5","type":"exact"},{"name":"otosclerosis 5","type":"exact"}],"termid":"MONDO:0012121","xrefs":{"Monarch":{"xref_id":"0012121"}}}


id: MONDO:0002943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal cell carcinoma that arises from the skin of the external ear.","definition_xrefs":["NCIT:C6082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external ear squamous cell carcinoma","termid":"MONDO:0003501"},{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"external ear basal cell carcinoma","secondary_identifiers":["DOID:4287","MEDGEN:234239","UMLS:C1333491"],"synonyms":[{"name":"basal cell carcinoma of external Ear","type":"exact"},{"name":"basal cell carcinoma of external ear","type":"related"},{"name":"basal cell carcinoma of the external Ear","type":"exact"},{"name":"basal cell carcinoma of the external ear","type":"exact"},{"name":"basal cell external ear carcinoma","type":"exact"},{"name":"external Ear basal cell carcinoma","type":"exact"},{"name":"external ear skin basal cell carcinoma","type":"exact"},{"name":"skin basal cell carcinoma of external ear","type":"exact"}],"termid":"MONDO:0002943","xrefs":{"Monarch":{"xref_id":"0002943"}}}


id: GO:0051136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer T cell differentiation.","definition_xrefs":["PMID:12154375","ISBN:0781735149","PMID:9133426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"regulates","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NK T cell differentiation","synonyms":[{"name":"regulation of NK T cell development","type":"related"},{"name":"regulation of NK T lymphocyte differentiation","type":"exact"},{"name":"regulation of NK T-cell differentiation","type":"exact"},{"name":"regulation of NK T-lymphocyte differentiation","type":"exact"},{"name":"regulation of NKT cell differentiation","type":"exact"},{"name":"regulation of NT cell differentiation","type":"exact"},{"name":"regulation of natural T cell differentiation","type":"exact"},{"name":"regulation of natural killer T cell differentiation","type":"exact"}],"termid":"GO:0051136"}


id: PBO:0041439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 57","termid":"PBO:0041439"}


id: PBO:0075116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 165","termid":"PBO:0075116"}


id: PBO:0067177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 234, pseudogene","termid":"PBO:0067177"}


id: GO:0009516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"leucoplast","secondary_identifiers":["Wikipedia:Leucoplast"],"termid":"GO:0009516"}


id: MONDO:1012293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"subacute necrotising encephalopathy of Leigh, non-human animal","termid":"MONDO:1011863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute necrotising encephalopathy of Leigh, cattle","secondary_identifiers":["OMIA:001097-9913"],"termid":"MONDO:1012293","xrefs":{"Monarch":{"xref_id":"1012293"}}}


id: PBO:0001848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase with bromodomain protein (predicted)","termid":"PBO:0001848"}


id: PBO:0075050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-13","termid":"PBO:0075050"}


id: GO:0008908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + isochorismate = 2,3-dihydroxy-2,3-dihydrobenzoate + pyruvate.","definition_xrefs":["EC:3.3.2.1","RHEA:11112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene-A4 hydrolase activity","termid":"GO:0004463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"isochorismatase activity","secondary_identifiers":["MetaCyc:ISOCHORMAT-RXN","KEGG_REACTION:R03037"],"synonyms":[{"name":"2,3 dihydro-2,3 dihydroxybenzoate synthase activity","type":"related"},{"name":"2,3-dihydro-2,3-dihydroxybenzoate synthase activity","type":"related"},{"name":"2,3-dihydroxy-2,3-dihydrobenzoate synthase activity","type":"related"},{"name":"2,3-dihydroxy-2,3-dihydrobenzoic synthase activity","type":"related"},{"name":"isochorismate pyruvate-hydrolase activity","type":"related"}],"termid":"GO:0008908"}


id: PBO:0063687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progastricsin","termid":"PBO:0063687"}


id: PBO:0001772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph3 (predicted)","termid":"PBO:0001772"}


id: PBO:0112790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, phosphate quality regulator Pqr1/Spx1","termid":"PBO:0112790"}


id: FYPO:0006969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of cytidine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular cytidine level","synonyms":[{"name":"decreased cellular cytidine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular cytidine level during vegetative growth","type":"exact"},{"name":"reduced cellular cytidine level","type":"exact"}],"termid":"FYPO:0006969"}


id: PBO:0056672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 30","termid":"PBO:0056672"}


id: FYPO:0004917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of a protein kinase activity occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:11402029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased positive regulation of protein kinase activity","synonyms":[{"name":"decreased activation of protein kinase activity","type":"narrow"},{"name":"decreased positive regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"decreased positive regulation of protein kinase activity during vegetative growth","type":"exact"},{"name":"reduced positive regulation of protein kinase activity","type":"exact"}],"termid":"FYPO:0004917"}


id: PBO:0065075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 divergent transcript","termid":"PBO:0065075"}


id: MONDO:0012852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 10q23-q24.","definition_xrefs":["DOID:0110898","PMID:10053016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 20","secondary_identifiers":["UMLS:C2676781","MEDGEN:394126","MESH:C567361","OMIM:612288"],"synonyms":[{"name":"IBD20","type":"exact"},{"name":"inflammatory bowel disease 20","type":"exact"},{"name":"inflammatory bowel disease type 20","type":"exact"}],"termid":"MONDO:0012852","xrefs":{"Monarch":{"xref_id":"0012852"}}}


id: FYPO:0006681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PMID:19111658","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006681"}


id: PBO:0073395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain bifurcated histone lysine methyltransferase 1","termid":"PBO:0073395"}


id: GO:0009602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a symbiont (an organism living in close physical association with an organism of a different species) is received and converted into a molecular signal. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198506732","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"},{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of symbiont","secondary_identifiers":["GO:0051855"],"synonyms":[{"name":"perception of symbiont","type":"related"},{"name":"recognition of symbiont","type":"exact"}],"termid":"GO:0009602"}


id: GO:1904014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a serotonin stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:1505525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to monoamine","termid":"GO:0071867"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to serotonin","termid":"GO:1904014"}


id: FYPO:0001505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular phosphatidylserine level","synonyms":[{"name":"increased cellular PS level","type":"exact"},{"name":"increased cellular phosphatidyl-L-serine level","type":"exact"},{"name":"increased cellular phosphatidylserine level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylserine level during vegetative growth","type":"exact"},{"name":"increased phosphatidylserine accumulation","type":"related"}],"termid":"FYPO:0001505"}


id: GO:0002933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a hydroxyl group to one or more fatty acids in a lipid.","definition_xrefs":["GOC:hjd","PMID:15658937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid hydroxylation","synonyms":[{"name":"fatty acid hydroxylation","type":"related"}],"termid":"GO:0002933"}


id: PBO:0063138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvin gamma","termid":"PBO:0063138"}


id: FYPO:0007270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear chromatin organization is abnormal, such regions containing transposons (Tf2 elements) are tethered to the centromere to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:23084836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"decreased Tf body tethering to centromere","synonyms":[{"name":"decreased Tf body tethering to centromere during mitotic cell cycle","type":"related"},{"name":"decreased Tf body tethering to centromere during vegetative growth","type":"exact"},{"name":"decreased Tf2 body tethering to centromere","type":"exact"},{"name":"decreased centromere tethering of Tf2 bodies","type":"exact"},{"name":"reduced Tf body tethering to centromere","type":"exact"}],"termid":"FYPO:0007270"}


id: GO:0106037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region that lies just beneath the plasma membrane in the middle of the apical edge of a cell.","definition_xrefs":["PMID:23831726","PMID:28263180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical cortex","termid":"GO:0045179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"apicomedial cortex","synonyms":[{"name":"medioapical cortex","type":"exact"}],"termid":"GO:0106037"}


id: PBO:0005220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Sds21","termid":"PBO:0005220"}


id: PBO:0091368
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency of long tract gene conversion in the rad57delta single mutant was suppressed in the swi5delta rad57delta double mutant, to a level similar to that observed in the rad51 mutant","termid":"PBO:0091368"}


id: FYPO:0006490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of M phase of the mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"},{"relation_name":"is_a","term_name":"decreased duration of mitotic cell cycle phase","termid":"FYPO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of mitotic M phase","synonyms":[{"name":"decreased duration of M phase during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitosis","type":"related"},{"name":"decreased duration of mitosis during mitotic cell cycle","type":"related"},{"name":"decreased duration of mitosis during vegetative growth","type":"related"},{"name":"decreased duration of mitotic nuclear division","type":"related"},{"name":"decreased mitotic M phase duration","type":"exact"},{"name":"decreased mitotic M phase duration during vegetative growth","type":"exact"},{"name":"reduced duration of mitotic M phase","type":"exact"}],"termid":"FYPO:0006490"}


id: GO:0047813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinitol + NAD+ = D-xylulose + NADH.","definition_xrefs":["EC:1.1.1.11","MetaCyc:D-ARABINITOL-4-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-arabinitol 4-dehydrogenase activity","secondary_identifiers":["RHEA:17921"],"termid":"GO:0047813"}


id: PR:O59760
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1020.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C1020.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.07","synonyms":[{"name":"Spom972h-SPCC1020.07","type":"exact"}],"termid":"PR:O59760"}


id: FYPO:0001962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphatase activity","termid":"FYPO:0001756"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abolished protein phosphatase activity","synonyms":[{"name":"protein phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0001962"}


id: PBO:0078555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 43C, pseudogene","termid":"PBO:0078555"}


id: MONDO:1011067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, domestic guinea pig","secondary_identifiers":["OMIA:001033-10141"],"termid":"MONDO:1011067","xrefs":{"Monarch":{"xref_id":"1011067"}}}


id: GO:0047703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-nitropropanoate + NADP+ = 3-nitroacrylate + H+ + NADPH.","definition_xrefs":["EC:1.3.1.16","RHEA:23892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-nitroacrylate reductase activity","secondary_identifiers":["KEGG_REACTION:R03900","MetaCyc:BETA-NITROACRYLATE-REDUCTASE-RXN"],"synonyms":[{"name":"3-nitropropanoate:NADP+ oxidoreductase activity","type":"related"},{"name":"b-nitroacrylate reductase activity","type":"exact"}],"termid":"GO:0047703"}


id: GO:0060804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that results in an increase in the rate, frequency or extent of a Wnt signaling pathway.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway by BMP signaling pathway (obsolete GO:0060804)","synonyms":[{"name":"positive regulation of WNT receptor signaling pathway by BMP signaling pathway","type":"exact"},{"name":"positive regulation of WNT receptor signalling pathway by BMP signalling pathway","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway by BMP signaling pathway","type":"exact"}],"termid":"GO:0060804"}


id: PBO:0059858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational initiation factor 2","termid":"PBO:0059858"}


id: SO:0001979
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif that affects the stability of RNA.","definition_xrefs":["PMID:22495308","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_stability_element","synonyms":[{"name":"RNA stability element","type":"exact"}],"termid":"SO:0001979"}


id: CHEBI:35696
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"Chloride of cobalt in which the metal is in the +2 oxidation state.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalt dichloride","termid":"CHEBI:35696"}


id: PBO:0031747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_centromeric_sister_chromatid_cohesion","termid":"PBO:0031747"}


id: PR:O42897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10758:SF2","PRO:DNx","OMA:SCHPO02558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.01","secondary_identifiers":["UniProtKB:O42897"],"synonyms":[{"name":"Spom972h-PSMD3","type":"exact"}],"termid":"PR:O42897"}


id: PR:G2TRM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC959.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C959.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.11","synonyms":[{"name":"Spom972h-SPAC959.11","type":"exact"}],"termid":"PR:G2TRM5"}


id: MONDO:0029138
data:
  {"annotated_genes":["SJAG_02316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85894],"is_not":false,"summary":null,"term":"MONDO:0029138"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 67","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16295","MEDGEN:1648285","OMIM:618141","UMLS:C4748341","DOID:0112203"],"synonyms":[{"name":"DEE67","type":"exact"},{"name":"EIEE67","type":"exact"},{"name":"developmental and epileptic encephalopathy 67","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 67","type":"exact"}],"termid":"MONDO:0029138","terms_by_termid":{"MONDO:0029138":null},"xrefs":{"Monarch":{"xref_id":"0029138"}}}


id: PBO:0084096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Rho1p and Rho2p; mutations are synthetically lethal with mutations in rom1, which also encodes a GEF; Rom2p localization to the bud surface is dependent on Ack1p; ROM2 has a paralog, ROM1, that arose from the whole genome duplication","termid":"PBO:0084096"}


id: GO:0033813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + deacetylcephalosporin C = cephalosporin C + CoA.","definition_xrefs":["EC:2.3.1.175","RHEA:23860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"deacetylcephalosporin-C acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.175-RXN","KEGG_REACTION:R03064"],"synonyms":[{"name":"CPC acetylhydrolase activity","type":"related"},{"name":"DAC acetyltransferase activity","type":"related"},{"name":"DAC-AT","type":"related"},{"name":"acetyl coenzyme A:DAC acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:DAC O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:DAC acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:deacetylcephalosporin-C O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:deacetylcephalosporin-C acetyltransferase activity","type":"related"},{"name":"cefG","type":"related"},{"name":"deacetylcephalosporin C acetyltransferase activity","type":"related"}],"termid":"GO:0033813"}


id: PBO:0073246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPSECS antisense RNA 1 (head to head)","termid":"PBO:0073246"}


id: GO:2000953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xyloglucan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of xyloglucan metabolic process","termid":"GO:2000950"},{"relation_name":"is_a","term_name":"regulation of xyloglucan catabolic process","termid":"GO:2000951"},{"relation_name":"is_a","term_name":"positive regulation of hemicellulose catabolic process","termid":"GO:2000990"},{"relation_name":"positively_regulates","term_name":"xyloglucan catabolic process","termid":"GO:2000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of xyloglucan catabolic process","synonyms":[{"name":"positive regulation of xyloglucan catabolism","type":"exact"}],"termid":"GO:2000953"}


id: FYPO:0006495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal at tRNA genes.","definition_xrefs":["PomBase:mah","PMID:29622660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of R-loops","termid":"FYPO:0007901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of R-loops at tRNA genes","synonyms":[{"name":"increased RNA-DNA hybrid level at tRNA genes","type":"exact"},{"name":"increased level of DNA:RNA hybrids at tRNA genes","type":"exact"},{"name":"increased level of RNA-DNA hybrids at tDNA","type":"exact"},{"name":"increased level of RNA-DNA hybrids at tRNA genes","type":"exact"},{"name":"increased level of RNA-DNA hybrids at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased level of RNA-DNA hybrids at tRNA genes during vegetative growth","type":"exact"}],"termid":"FYPO:0006495"}


id: GO:0052710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-alpha,N-alpha,N-alpha-trimethyl-L-histidine, also known as histidine betaine or hercynine, a trimethylated derivative of histidine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine metabolic process","termid":"GO:0052708"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolic process","synonyms":[{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine breakdown","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolism","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine degradation","type":"exact"},{"name":"hercynine breakdown","type":"exact"},{"name":"hercynine catabolic process","type":"exact"},{"name":"hercynine catabolism","type":"exact"},{"name":"hercynine degradation","type":"exact"},{"name":"histidine betaine breakdown","type":"exact"},{"name":"histidine betaine catabolic process","type":"exact"},{"name":"histidine betaine catabolism","type":"exact"},{"name":"histidine betaine degradation","type":"exact"}],"termid":"GO:0052710"}


id: MONDO:0007705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"Heinz body anemia","secondary_identifiers":["UMLS:C0700299","DOID:0111363","HP:0005511","OMIM:140700","MEDGEN:148583","MESH:C563030","Orphanet:178330","MedDRA:10002058"],"synonyms":[{"name":"Heinz body anemias","type":"related"},{"name":"Heinz body anemias, alpha-","type":"exact"}],"termid":"MONDO:0007705","xrefs":{"Monarch":{"xref_id":"0007705"}}}


id: PBO:0075744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 3","termid":"PBO:0075744"}


id: MONDO:0003475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of ependymoma characterized by well formed papillae. Tumor cell processes abutting capillaries are usually GFAP-positive. Differential diagnoses include choroid plexus papilloma, papillary meningioma and metastatic papillary carcinoma. (Adapted from WHO)","definition_xrefs":["NCIT:C4319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary ependymoma","secondary_identifiers":["MEDGEN:90810","UMLS:C0334578","DOID:5505","ICDO:9393/3"],"synonyms":[{"name":"papillary ependymoma","type":"exact"}],"termid":"MONDO:0003475","xrefs":{"Monarch":{"xref_id":"0003475"}}}


id: GO:0047846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a deoxynucleoside 3'-phosphate + H2O = a deoxynucleoside + phosphate.","definition_xrefs":["MetaCyc:DEOXYNUCLEOTIDE-3-PHOSPHATASE-RXN","EC:3.1.3.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"deoxynucleotide 3'-phosphatase activity","secondary_identifiers":["RHEA:10092"],"synonyms":[{"name":"3'-deoxynucleotidase activity","type":"related"},{"name":"3'-deoxyribonucleotidase activity","type":"related"},{"name":"deoxyribonucleotide 3'-phosphohydrolase activity","type":"related"}],"termid":"GO:0047846"}


id: PBO:0059477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microseminoprotein beta","termid":"PBO:0059477"}


id: PATO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000382 gender value (obsolete PATO:0000382)","termid":"PATO:0000382"}


id: GO:2000986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of behavioral fear response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"negative regulation of fear response","termid":"GO:1903366"},{"relation_name":"is_a","term_name":"regulation of behavioral fear response","termid":"GO:2000822"},{"relation_name":"negatively_regulates","term_name":"behavioral fear response","termid":"GO:0001662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of behavioral fear response","synonyms":[{"name":"negative regulation of behavioural fear response","type":"exact"}],"termid":"GO:2000986"}


id: GO:0043895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of part of a 1,4-alpha-D-glucan chain by formation of a 1,4-alpha-D-glucosidic bond.","definition_xrefs":["EC:2.4.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cyclomaltodextrin glucanotransferase activity","secondary_identifiers":["MetaCyc:2.4.1.19-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan 4-alpha-D-(1,4-alpha-D-glucano)-transferase (cyclizing)","type":"exact"},{"name":"BMA","type":"related"},{"name":"Bacillus macerans amylase","type":"related"},{"name":"CGTase","type":"related"},{"name":"alpha-1,4-glucan 4-glycosyltransferase, cyclizing","type":"related"},{"name":"alpha-cyclodextrin glucanotransferase","type":"related"},{"name":"alpha-cyclodextrin glycosyltransferase","type":"related"},{"name":"beta-cyclodextrin glucanotransferase","type":"related"},{"name":"beta-cyclodextrin glycosyltransferase","type":"related"},{"name":"cyclodextrin glucanotransferase","type":"broad"},{"name":"cyclodextrin glycosyltransferase","type":"related"},{"name":"cyclomaltodextrin glucotransferase","type":"related"},{"name":"cyclomaltodextrin glycosyltransferase","type":"related"},{"name":"gamma-cyclodextrin glycosyltransferase","type":"related"},{"name":"konchizaimu","type":"related"},{"name":"neutral-cyclodextrin glycosyltransferase","type":"related"}],"termid":"GO:0043895"}


id: PBO:0045250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C30","termid":"PBO:0045250"}


id: PBO:0039478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A1","termid":"PBO:0039478"}


id: PBO:0049536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 7","termid":"PBO:0049536"}


id: MONDO:0013433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary sclerosing cholangitis (PSC) is a rare, slowly progressive liver disease characterized by inflammation and destruction of the intra- and/or extra-hepatic bile ducts that lead to cholestasis, liver fibrosis, liver cirrhosis and ultimately liver failure.","definition_xrefs":["Orphanet:171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sclerosing cholangitis","termid":"MONDO:0018646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"primary sclerosing cholangitis","secondary_identifiers":["GARD:1280","NANDO:1200440","OMIM:613806","icd11.foundation:857962451","SCTID:197441003","DOID:0060643","NANDO:2100265","MedDRA:10036732","MEDGEN:107565","NORD:1613","UMLS:C0566602"],"synonyms":[{"name":"PSC","type":"exact"},{"name":"cholangitis, primary sclerosing","type":"related"}],"termid":"MONDO:0013433","xrefs":{"Monarch":{"xref_id":"0013433"}}}


id: MONDO:0002197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign neoplasm that arises from the vulva It is characterized by the presence of clusters of small glands lined by mucinous epithelial cells. Bartholin duct structures are not present.","definition_xrefs":["NCIT:C40301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular gland benign neoplasm","termid":"MONDO:0000626"},{"relation_name":"is_a","term_name":"vulvar glandular neoplasm","termid":"MONDO:0002198"},{"relation_name":"is_a","term_name":"paraurethral gland neoplasm","termid":"MONDO:0002219"},{"relation_name":"is_a","term_name":"benign urethral neoplasm","termid":"MONDO:0004177"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minor vestibular glands adenoma","secondary_identifiers":["DOID:2075","UMLS:C1510791","MEDGEN:267644"],"synonyms":[{"name":"adenoma of minor vestibular glands","type":"exact"},{"name":"minor vestibular gland adenoma","type":"exact"}],"termid":"MONDO:0002197","xrefs":{"Monarch":{"xref_id":"0002197"}}}


id: GO:0097189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle containing parts of a dying cell. Apoptotic bodies can be formed during the execution phase of the apoptotic process, when the cell's cytoskeleton breaks up and causes the membrane to bulge outward. These bulges may separate from the cell, taking a portion of cytoplasm with them, to become apoptotic bodies. These are then engulfed by phagocytic cells, and their components recycled. Apoptotic bodies may range in size from 0.8 to 5um.","definition_xrefs":["Wikipedia:Apoptosis","GOC:vesicles","GOC:mtg_apoptosis","Wikipedia:Bleb_(cell_biology)","PMID:24223256","PMID:15242875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"apoptotic body","synonyms":[{"name":"apoptotic bleb","type":"related"},{"name":"apoptotic vesicle","type":"exact"}],"termid":"GO:0097189"}


id: PBO:0039880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 39","termid":"PBO:0039880"}


id: PBO:0045068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 1","termid":"PBO:0045068"}


id: MONDO:0014503
data:
  {"annotated_genes":["SJAG_05212"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86237],"is_not":false,"summary":null,"term":"MONDO:0014503"}]},"cv_name":"mondo","definition":"Any autosomal recessive congenital cerebellar ataxia in which the cause of the disease is a mutation in the CWF19L1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal recessive congenital cerebellar ataxia","termid":"MONDO:0020043"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080064","OMIM:616127","GARD:17786","MEDGEN:863738","Orphanet:453521","UMLS:C4015301"],"synonyms":[{"name":"CWF19L1 autosomal recessive congenital cerebellar ataxia","type":"exact"},{"name":"SCAR17","type":"exact"},{"name":"autosomal recessive cerebellar ataxia due to CWF19L1 deficiency","type":"related"},{"name":"autosomal recessive congenital cerebellar ataxia caused by mutation in CWF19L1","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 17","type":"exact"},{"name":"spinocerebellar ataxia autosomal recessive type 17","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 17","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 17","type":"exact"}],"termid":"MONDO:0014503","terms_by_termid":{"MONDO:0014503":null},"xrefs":{"Monarch":{"xref_id":"0014503"}}}


id: PBO:0036364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate transmembrane transporter (predicted)","termid":"PBO:0036364"}


id: MONDO:0003671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myocardial infarction (disease) that involves the cardiac septum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"},{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"septal myocardial infarction","secondary_identifiers":["UMLS:C0746727","DOID:5846","MEDGEN:148176"],"synonyms":[{"name":"cardiac septum myocardial infarction (disease)","type":"exact"},{"name":"myocardial infarction (disease) of cardiac septum","type":"exact"}],"termid":"MONDO:0003671","xrefs":{"Monarch":{"xref_id":"0003671"}}}


id: MONDO:0019994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 13 is an uniparental disomy of maternal origin that most likely do not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only mother is a carrier.","definition_xrefs":["Orphanet:97678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 13 disorder","termid":"MONDO:0700020"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 13","secondary_identifiers":["UMLS:C4722325","icd11.foundation:729188840","MEDGEN:1656812","GARD:19382"],"synonyms":[{"name":"UPD(13)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 13","type":"exact"}],"termid":"MONDO:0019994","xrefs":{"Monarch":{"xref_id":"0019994"}}}


id: FYPO:0007204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an rDNA spacer replication fork barrier by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:18794373","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-stranded DNA binding","termid":"FYPO:0007543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished rDNA spacer replication fork barrier binding","synonyms":[{"name":"abolished DNA binding at rDNA spacer replication fork barrier","type":"exact"}],"termid":"FYPO:0007204"}


id: GO:1904685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metalloendopeptidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:18591254","GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endopeptidase activity","termid":"GO:0010950"},{"relation_name":"is_a","term_name":"regulation of metalloendopeptidase activity","termid":"GO:1904683"},{"relation_name":"is_a","term_name":"positive regulation of metallopeptidase activity","termid":"GO:1905050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metalloendopeptidase activity","synonyms":[{"name":"activation of metalloendopeptidase activity","type":"narrow"},{"name":"activation of metalloendoprotease activity","type":"narrow"},{"name":"activation of metalloendoproteinase activity","type":"narrow"},{"name":"positive regulation of metalloendoprotease activity","type":"narrow"},{"name":"positive regulation of metalloendoproteinase activity","type":"narrow"},{"name":"up regulation of metalloendopeptidase activity","type":"exact"},{"name":"up regulation of metalloendoprotease activity","type":"narrow"},{"name":"up regulation of metalloendoproteinase activity","type":"narrow"},{"name":"up-regulation of metalloendopeptidase activity","type":"exact"},{"name":"up-regulation of metalloendoprotease activity","type":"narrow"},{"name":"up-regulation of metalloendoproteinase activity","type":"narrow"},{"name":"upregulation of metalloendopeptidase activity","type":"exact"},{"name":"upregulation of metalloendoprotease activity","type":"narrow"},{"name":"upregulation of metalloendoproteinase activity","type":"narrow"}],"termid":"GO:1904685"}


id: MONDO:0005704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with protozoa of the phylum ciliophora.","definition_xrefs":["MESH:D016770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ciliophora infectious disease","secondary_identifiers":["UMLS:C0085308","MEDGEN:88379"],"synonyms":[{"name":"Ciliophora caused disease or disorder","type":"exact"},{"name":"Ciliophora disease or disorder","type":"exact"}],"termid":"MONDO:0005704","xrefs":{"Monarch":{"xref_id":"0005704"}}}


id: PBO:0088086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX (ubiquitin regulatory X) domain-containing protein; interacts with Cdc48p; UBX7 has a paralog, UBX6, that arose from the whole genome duplication","termid":"PBO:0088086"}


id: PBO:0001840
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.10","termid":"PBO:0001840"}


id: PBO:0113422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B12.6; contacts DNA; mutations affect transcription start site selection and fidelity of transcription; positively regulates ATG1 transcription as a key regulator of autophagy","termid":"PBO:0113422"}


id: GO:0016589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2L in mammals), a NURF301 homolog (BPTF in humans), and additional subunits, though the composition of these additional subunits varies slightly with species. NURF is involved in regulation of transcription from TRNA polymerase II promoters.","definition_xrefs":["PMID:21810179","PMID:16568949","GOC:krc","PMID:11279013","PMID:10779516","PMID:15284901","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"NURF complex","synonyms":[{"name":"nucleosome remodeling factor complex","type":"exact"}],"termid":"GO:0016589"}


id: GO:0061465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the plasma membrane that contributes to the structure of a hemidesmosome.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part of hemidesmosome (obsolete GO:0061465)","termid":"GO:0061465"}


id: GO:0018084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of N-terminal peptidyl-serine to lactic acid.","definition_xrefs":["RESID:AA0186"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lactic acid biosynthetic process from peptidyl-serine (obsolete GO:0018084)","synonyms":[{"name":"peptidyl-lactic acid anabolism from peptidyl-serine","type":"exact"},{"name":"peptidyl-lactic acid formation from peptidyl-serine","type":"exact"},{"name":"peptidyl-lactic acid synthesis from peptidyl-serine","type":"exact"}],"termid":"GO:0018084"}


id: GO:0062092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytosolic complex that functions as an substrate-specific adaptor, linking the cytosolic iron-sulfur protein assembly (CIA) targeting complex to apo-Rli1p, an ABC protein involved in ribosome recycling, facilitating Fe-S cluster insertion and the maturation of the Rli1p.","definition_xrefs":["PMID:26182403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Yae1-Lto1 complex","termid":"GO:0062092"}


id: GO:0008473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine = L-proline + NH4.","definition_xrefs":["RHEA:24368","EC:4.3.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ornithine cyclodeaminase activity","secondary_identifiers":["KEGG_REACTION:R00671","MetaCyc:ORNITHINE-CYCLODEAMINASE-RXN"],"synonyms":[{"name":"L-ornithine ammonia-lyase (cyclizing)","type":"related"},{"name":"L-ornithine ammonia-lyase (cyclizing; L-proline-forming)","type":"related"},{"name":"OCD activity","type":"related"},{"name":"ornithine cyclase (deaminating) activity","type":"related"},{"name":"ornithine cyclase activity","type":"related"}],"termid":"GO:0008473"}


id: PBO:0041651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 1","termid":"PBO:0041651"}


id: SO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site (e.g. CACTGTG), part of a 5' D-recombination signal sequence (SO:0000556) of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"five_prime_D_recombination_signal_sequence","termid":"SO:0000556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_D_heptamer","synonyms":[{"name":"5'D-HEPTAMER","type":"exact"},{"name":"five prime D heptamer","type":"exact"}],"termid":"SO:0000496"}


id: FYPO:0002849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved when the cell population has been in stationary phase and is then placed in conditions that allow recovery. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"curved cell during recovery from stationary phase","synonyms":[{"name":"comma-shaped cell during recovery from stationary phase","type":"exact"},{"name":"curved cell during recovery from stationary phase during mitotic cell cycle","type":"related"},{"name":"curved cell during vegetative growth following stationary phase","type":"exact"}],"termid":"FYPO:0002849"}


id: GO:0072731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a papulacandin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to papulacandin B","termid":"GO:0072730"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to papulacandin B","termid":"GO:0072731"}


id: PR:Q2EEM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q2EEM0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.12","synonyms":[{"name":"Spom972h-SPAC27E2.12","type":"exact"}],"termid":"PR:Q2EEM0"}


id: MONDO:0005637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adult-onset Still disease (obsolete MONDO:0005637)","synonyms":[{"name":"obsolete adult-onset Still's disease","type":"exact"}],"termid":"MONDO:0005637","xrefs":{"Monarch":{"xref_id":"0005637"}}}


id: PBO:0042280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCZ1 pseudogene 1","termid":"PBO:0042280"}


id: PBO:0090488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family membrane adaptor Mug170","termid":"PBO:0090488"}


id: PBO:0063849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 2","termid":"PBO:0063849"}


id: PBO:0057370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548al","termid":"PBO:0057370"}


id: PBO:0052369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 17","termid":"PBO:0052369"}


id: GO:0005711
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome involved in the process of meiosis.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete meiotic chromosome (obsolete GO:0005711)","synonyms":[{"name":"meiotic chromosome","type":"exact"}],"termid":"GO:0005711"}


id: MONDO:0001005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumoconiosis caused by inhalation of kaolin dust.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed mineral dust pneumoconiosis","termid":"MONDO:0001000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kaolin pneumoconiosis","secondary_identifiers":["DOID:10331","GARD:8355","MEDGEN:78108","NCIT:C35315","ICD9:502","UMLS:C0264435","SCTID:36696005"],"synonyms":[{"name":"Kaolinosis","type":"exact"},{"name":"simple kaolinosis","type":"related"}],"termid":"MONDO:0001005","xrefs":{"Monarch":{"xref_id":"0001005"}}}


id: GO:0141127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters a Rab protein family-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30181274","PMID:30893609","PMID:24251537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host small GTPase-mediated signal transduction","termid":"GO:0044082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host Rab small GTPase signal transduction","synonyms":[{"name":"modulation by symbiont of host Rab protein mediated signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein-mediated signal transduction","type":"exact"},{"name":"modulation of host Rab protein signal transduction by symbiont","type":"exact"},{"name":"modulation of host Rab protein signaling by symbiont","type":"exact"},{"name":"modulation of host Rab protein signalling by symbiont","type":"exact"},{"name":"perturbation of host Rab protein signal transduction","type":"exact"},{"name":"symbiont-mediated perturbation of host Rab protein signal transduction","type":"exact"}],"termid":"GO:0141127"}


id: MOD:01965
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 2xC(13),3x(2)H labeled N6-acetyl-L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acetyl-L-lysine","termid":"MOD:00064"},{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"},{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875","MOD:00408"],"is_obsolete":false,"name":"2xC(13),3x(2)H labeled N6-acetyl-L-lysine","synonyms":[{"name":"Acetate labeling reagent (K) (heavy form, +5amu)","type":"exact"},{"name":"COFRADIC heavy acetyl 13C2 2H3","type":"exact"}],"termid":"MOD:01965"}


id: PBO:0070460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 3","termid":"PBO:0070460"}


id: MOD:00029
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-valine.","definition_xrefs":["DeltaMass:0","ChEBI:30015","RESID:AA0020","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine residue","synonyms":[{"name":"(2S)-2-amino-3-methylbutanoic acid","type":"exact"},{"name":"2-azanyl-3-methylbutanoic acid","type":"exact"},{"name":"L-valine","type":"exact"},{"name":"Val","type":"exact"},{"name":"alpha-amino-beta-methylbutyric acid","type":"exact"},{"name":"alpha-aminoisovaleric acid","type":"exact"}],"termid":"MOD:00029"}


id: PBO:0111794
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin","termid":"PBO:0111794"}


id: GO:1900574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emodin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"emodin metabolic process","termid":"GO:1900573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"emodin catabolic process","synonyms":[{"name":"emodin breakdown","type":"exact"},{"name":"emodin catabolism","type":"exact"},{"name":"emodin degradation","type":"exact"}],"termid":"GO:1900574"}


id: PBO:0111927
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide Mi","termid":"PBO:0111927"}


id: SO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An EST read from the 5' end of a transcript that usually codes for a protein. These regions tend to be conserved across species and do not change much within a gene family.","direct_ancestors":[{"relation_name":"is_a","term_name":"EST","termid":"SO:0000345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_EST","synonyms":[{"name":"5' EST","type":"exact"},{"name":"five prime EST","type":"exact"}],"termid":"SO:0001208"}


id: PBO:0002704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint clamp complex protein Hus1","termid":"PBO:0002704"}


id: PBO:0044685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendrin","termid":"PBO:0044685"}


id: MONDO:0010065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinocerebellar ataxia type 2","termid":"MONDO:0008458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar degeneration with slow eye movements","secondary_identifiers":["OMIM:271322"],"synonyms":[{"name":"SDSEM","type":"related"},{"name":"spinocerebellar degeneration with slow eye movements","type":"exact"}],"termid":"MONDO:0010065","xrefs":{"Monarch":{"xref_id":"0010065"}}}


id: MONDO:0011764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the LRRK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late-onset Parkinson disease","termid":"MONDO:0008199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant Parkinson disease 8","secondary_identifiers":["DOID:0060371","GARD:18476","OMIM:607060","MEDGEN:339628","UMLS:C1846862"],"synonyms":[{"name":"LRRK2 Parkinson disease","type":"exact"},{"name":"PARK8","type":"related"},{"name":"Parkinson disease 8","type":"exact"},{"name":"Parkinson disease 8, autosomal dominant","type":"related"},{"name":"Parkinson disease caused by mutation in LRRK2","type":"exact"},{"name":"autosomal dominant Parkinson disease 8","type":"exact"},{"name":"autosomal dominant Parkinson disease type 8","type":"exact"},{"name":"autosomal dominant Parkinson's disease 8","type":"related"}],"termid":"MONDO:0011764","xrefs":{"Monarch":{"xref_id":"0011764"}}}


id: GO:1990358
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multifunctional supermolecular complex, containing several proteins with hemicellulase activity. Functions to hydrolyze hemicellulose.","definition_xrefs":["PMID:16769147","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"xylanosome","synonyms":[{"name":"xylanolytic complex","type":"exact"}],"termid":"GO:1990358"}


id: GO:0010341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a gibberellin = S-adenosyl-L-homocysteine + a gibberellin methyl ester.","definition_xrefs":["PMID:17220201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl-O-methyltransferase activity","termid":"GO:0010340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"gibberellin carboxyl-O-methyltransferase activity","termid":"GO:0010341"}


id: GO:0102927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-chaconine + UDP-L-rhamnose = H+ + alpha-chaconine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-chaconine rhamnosyltransferase activity (obsolete GO:0102927)","termid":"GO:0102927"}


id: PR:O74332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1685.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.12c","synonyms":[{"name":"Spom972h-SPBC1685.12c","type":"exact"}],"termid":"PR:O74332"}


id: GO:0005773
data:
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closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. 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id: GO:0048645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process pertaining to the initial formation of an animal organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ formation","synonyms":[{"name":"animal organ primordium initiation","type":"narrow"},{"name":"initiation of an animal organ primordium","type":"narrow"}],"termid":"GO:0048645"}


id: GO:1990889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H4 trimethylated at lysine 20.","definition_xrefs":["PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated histone binding","termid":"GO:0035064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"H4K20me3 modified histone binding","termid":"GO:1990889"}


id: MONDO:0012616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MRT8 (obsolete MONDO:0012616)","termid":"MONDO:0012616","xrefs":{"Monarch":{"xref_id":"0012616"}}}


id: SO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyldihydrouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyldihydrouridine","secondary_identifiers":["RNAMOD:093"],"synonyms":[{"name":"5-methyldihydrouridine","type":"exact"},{"name":"five methyldihydrouridine","type":"exact"},{"name":"m5D","type":"exact"}],"termid":"SO:0001376"}


id: SO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methyl_3_3_amino_3_carboxypropyl_pseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methyl_three_three_amino_three_carboxypropyl_pseudouridine","secondary_identifiers":["RNAMOD:086"],"synonyms":[{"name":"1-methyl-3-(3-amino-3-carboxypropyl) pseudouridine","type":"exact"},{"name":"m1acp3Y","type":"exact"}],"termid":"SO:0001373"}


id: GO:1901335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone catabolic process","synonyms":[{"name":"lactone breakdown","type":"exact"},{"name":"lactone catabolism","type":"exact"},{"name":"lactone degradation","type":"exact"}],"termid":"GO:1901335"}


id: PBO:0052725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 17","termid":"PBO:0052725"}


id: GO:0045637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myeloid cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemopoiesis","termid":"GO:1903706"},{"relation_name":"regulates","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid cell differentiation","secondary_identifiers":["Reactome:R-HSA-8939246"],"termid":"GO:0045637"}


id: GO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that have undergone an epithelial to mesenchymal transition from the epicardium into the myocardium.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cell migration to the myocardium","termid":"GO:0003346"}


id: FYPO:0004656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"},{"relation_name":"is_a","term_name":"abnormal protein localization to telomere during vegetative growth","termid":"FYPO:0003108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to telomere during vegetative growth","synonyms":[{"name":"increased protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"increased protein localisation to telomere during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"increased protein localization to telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004656"}


id: MONDO:0010934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete DFNB5 (obsolete MONDO:0010934)","termid":"MONDO:0010934","xrefs":{"Monarch":{"xref_id":"0010934"}}}


id: PBO:0110320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 1,4-galactosyltransferase (P1PK blood group)","termid":"PBO:0110320"}


id: PBO:0077163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 4, transcriptional corepressor","termid":"PBO:0077163"}


id: PBO:0031424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_phenotype","termid":"PBO:0031424"}


id: PBO:0059929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 15","termid":"PBO:0059929"}


id: GO:1990494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["PMID:18256290"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic cytokinesis, actomyosin contractile ring assembly (obsolete GO:1990494)","synonyms":[{"name":"regulation of mitotic cytokinesis, actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1990494"}


id: PBO:0004316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear rim protein Amo1","termid":"PBO:0004316"}


id: PBO:0077517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 232","termid":"PBO:0077517"}


id: GO:0042491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized inner cell acquires specialized features of an auditory hair cell.","definition_xrefs":["CL:0000201","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cell differentiation","termid":"GO:0035315"},{"relation_name":"is_a","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear auditory receptor cell differentiation","synonyms":[{"name":"auditory hair cell differentiation","type":"exact"},{"name":"auditory receptor cell differentiation","type":"related"}],"termid":"GO:0042491"}


id: GO:0019089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of virions in order to create new infection.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete transmission of virus (obsolete GO:0019089)","synonyms":[{"name":"viral transmission","type":"exact"}],"termid":"GO:0019089"}


id: MOD:01954
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-selenocysteine residue to dehydroalanine.","definition_xrefs":["PubMed:7947813","PubMed:21420488","PubMed:1815586","PubMed:8239649","PubMed:20805503","RESID:AA0181","PubMed:1547888","PubMed:10220322","PubMed:12781460","PubMed:22031445","PubMed:2914619","ChEBI:17123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Sec)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:01954"}


id: PBO:0055325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2753","termid":"PBO:0055325"}


id: SO:0002214
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon is changed, resulting in a stop codon inserted next to an existing stop codon. This leads to a polypeptide of the same length.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"redundant_inserted_stop_gained","synonyms":[{"name":"redundant inserted stop gained","type":"exact"}],"termid":"SO:0002214"}


id: PBO:0079471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin actin binding protein 2","termid":"PBO:0079471"}


id: PBO:0082576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin transglycosylase; functions in the transfer of chitin to beta(1-6) and beta(1-3) glucans in the cell wall; similar and functionally redundant to Utr2; localizes to sites of polarized growth; expression induced by cell wall stress","termid":"PBO:0082576"}


id: PBO:0062400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 23 pseudogene","termid":"PBO:0062400"}


id: PBO:0091816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, paralog of SPNCRNA.116","termid":"PBO:0091816"}


id: GO:0140807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamyl-[protein] + NAD+ = 5-O-(ADP-D-ribosyl)-L-glutamyl-[protein] + nicotinamide.","definition_xrefs":["PMID:25043379","RHEA:58224","PMID:19764761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NAD+-protein-glutamate ADP-ribosyltransferase activity","termid":"GO:0140807"}


id: GO:1903808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tyrosine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","PMID:23895341","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine transport","termid":"GO:0015828"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-tyrosine import across plasma membrane","secondary_identifiers":["GO:0036232"],"synonyms":[{"name":"L-tyrosine import","type":"broad"},{"name":"L-tyrosine import into cell","type":"exact"},{"name":"L-tyrosine uptake","type":"exact"}],"termid":"GO:1903808"}


id: GO:2000936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellotriose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellotriose metabolic process","termid":"GO:2000933"},{"relation_name":"regulates","term_name":"cellotriose catabolic process","termid":"GO:2000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cellotriose catabolic process","synonyms":[{"name":"regulation of cellotriose catabolism","type":"exact"}],"termid":"GO:2000936"}


id: PBO:0069961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1255, pseudogene","termid":"PBO:0069961"}


id: MOD:01705
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen with an isotope tagged reagent acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}


id: MONDO:0008700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acheiropodia is an extremely rare developmental disorder characterized by bilateral, congenital and complete amputation of the distal extremities (amputation of distal epiphysis of the humerus, distal portion of the tibial diaphysis, aplasia of the radius, ulna, fibula) and aplasia of hands and feet (aplasia of carpal, metacarpal, tarsal, metatarsal and phalangeal bones). Rarely, an ectopic bone can be found at the distal end of the humerus. No other systemic manifestations have been reported and the disorder follows an autosomal recessive pattern of inheritance.","definition_xrefs":["Orphanet:931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acheiropody","secondary_identifiers":["SCTID:177504007","UMLS:C0265559","OMIM:200500","GARD:376","MEDGEN:120547","MESH:C536014","DOID:0050603"],"synonyms":[{"name":"ACHP","type":"related"},{"name":"acheiropodia","type":"exact"},{"name":"acheiropody","type":"exact"},{"name":"acheiropody, Brazilian type","type":"related"},{"name":"horn-Kolb syndrome","type":"exact"}],"termid":"MONDO:0008700","xrefs":{"Monarch":{"xref_id":"0008700"}}}


id: PBO:0089104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoprotein 3 family Vps74","termid":"PBO:0089104"}


id: GO:0008759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of an acetyl group from the 2-N position of glucosamine in the lipid A precursor UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine.","definition_xrefs":["PMID:10026271"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity (obsolete GO:0008759)","termid":"GO:0008759"}


id: MONDO:0019419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-macrocephaly-macroorchidism syndrome is characterized by intellectual deficit affecting both sexes, macrocephaly, and macroorchidism in the majority of affected males. It has been described in 12 individuals from two generations of one family. Other males from this family did not display intellectual deficit but did present macroorchidism and macrocephaly. Transmission is X-linked and the causative gene has been localized to the q12-q21 region of the X chromosome.","definition_xrefs":["Orphanet:85320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-macrocephaly-macroorchidism syndrome","secondary_identifiers":["SCTID:719825000","MEDGEN:930075","UMLS:C4304406","GARD:19055"],"synonyms":[{"name":"Johnson syndrome","type":"exact"}],"termid":"MONDO:0019419","xrefs":{"Monarch":{"xref_id":"0019419"}}}


id: GO:0005358
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116653],"is_not":false,"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constitutive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose:proton symporter activity","termid":"GO:0005356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity D-glucose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high-affinity glucose:proton symporter activity","type":"exact"},{"name":"high-affinity hydrogen/glucose transporter activity","type":"broad"},{"name":"high-affinity hydrogen:glucose symporter activity","type":"exact"},{"name":"high-affinity hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005358","terms_by_termid":{"GO:0005358":null}}


id: PBO:0062545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily K member 1 pseudogene","termid":"PBO:0062545"}


id: GO:0034693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that is formed by the association of the U11 and U12 small nuclear ribonucleoproteins.","definition_xrefs":["GOC:mah","PMID:15146077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U11/U12 snRNP","synonyms":[{"name":"18S U11/U12 snRNP","type":"narrow"},{"name":"snRNP U11/U12","type":"exact"}],"termid":"GO:0034693"}


id: PBO:0044567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia like","termid":"PBO:0044567"}


id: PBO:0077186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 9","termid":"PBO:0077186"}


id: MONDO:0008918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carnitine-acylcarnitine translocase (CACT) deficiency is a life-threatening, inherited disorder of fatty acid oxidation which usually presents in the neonatal period with severe hypoketotic hypoglycemia, hyperammonemia, cardiomyopathy and/or arrhythmia, hepatic dysfunction, skeletal muscle weakness, and encephalopathy.","definition_xrefs":["Orphanet:159"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hypertrophic cardiomyopathy","termid":"MONDO:0005045"},{"relation_name":"excluded_subClassOf","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"},{"relation_name":"is_a","term_name":"disorder of carnitine cycle and carnitine transport","termid":"MONDO:0017716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"carnitine-acylcarnitine translocase deficiency","secondary_identifiers":["NANDO:2200511","UMLS:C0342791","SCTID:238003000","icd11.foundation:677949122","NCIT:C133086","MEDGEN:91000","NANDO:1200972","GARD:1123","DOID:0111585","MESH:C562812","OMIM:212138"],"synonyms":[{"name":"CACT deficiency","type":"exact"},{"name":"CACTD","type":"related"},{"name":"CARNITINE-acylcarnitine translocase deficiency","type":"related"},{"name":"Cact deficiency","type":"related"},{"name":"carnitine-acylcarnitine translocase deficiency","type":"exact"}],"termid":"MONDO:0008918","xrefs":{"Monarch":{"xref_id":"0008918"}}}


id: PBO:0027307
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_rDNA","termid":"PBO:0027307"}


id: GO:0141113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["PMID:19056682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of non-canonical Wnt signaling pathway","termid":"GO:2000051"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway, planar cell polarity pathway","termid":"GO:2000095"},{"relation_name":"negatively_regulates","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0141113"}


id: GO:1905210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast chemotaxis.","definition_xrefs":["GOC:TermGenie","PMID:8760137","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"fibroblast chemotaxis","termid":"GO:1990956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast chemotaxis","termid":"GO:1905210"}


id: PBO:0003199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Histidine","termid":"PBO:0003199"}


id: GO:0048321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an axial mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"axial mesoderm formation","termid":"GO:0048320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesodermal cell differentiation","synonyms":[{"name":"axial mesoderm cell differentiation","type":"exact"}],"termid":"GO:0048321"}


id: GO:0051742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyl-6-solanyl-1,4-benzoquinone + S-adenosyl-methionine = 2,3-dimethyl-6-solanyl-1,4-benzoquinone + S-adenosyl-homocysteine.","definition_xrefs":["MetaCyc:RXN-2762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"2-methyl-6-solanyl-1,4-benzoquinone methyltransferase activity","secondary_identifiers":["RHEA:37999"],"synonyms":[{"name":"MSBQ methyltransferase activity","type":"exact"}],"termid":"GO:0051742"}


id: MONDO:0011325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi anemia caused by mutations of the FANCF gene. This gene encodes a polypeptide with homology to the prokaryotic RNA-binding protein ROM.","definition_xrefs":["NCIT:C125707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0021190","MONDO:0002280","MONDO:0005570","MONDO:0005066"],"is_obsolete":false,"name":"Fanconi anemia complementation group F","secondary_identifiers":["DOID:0111088","MEDGEN:854016","OMIM:603467","GARD:15355","UMLS:C3469526"],"synonyms":[{"name":"FANCF","type":"exact"},{"name":"Fanconi Anemia, complementation group type F","type":"exact"},{"name":"Fanconi anaemia complementation group type F","type":"exact"},{"name":"Fanconi anemia complementation group F","type":"exact"},{"name":"Fanconi anemia complementation group type F","type":"exact"},{"name":"Fanconi anemia, complementation group F","type":"related"}],"termid":"MONDO:0011325","xrefs":{"Monarch":{"xref_id":"0011325"}}}


id: PBO:0054029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1360","termid":"PBO:0054029"}


id: MONDO:0010408
data:
  {"annotated_genes":["SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86263],"is_not":false,"summary":null,"term":"MONDO:0010408"}]},"cv_name":"mondo","definition":"This syndrome is characterized by the association of toe syndactyly, facial dysmorphism including telecanthus (abnormal distance between the eyes) and a broad nasal tip, urogenital malformations and anal atresia.","definition_xrefs":["Orphanet:140952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01213":null},"genotype_count":0,"is_obsolete":false,"name":"syndactyly-telecanthus-anogenital and renal malformations syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111931","SCTID:723581006","MEDGEN:394424","MESH:C567475","UMLS:C2678045","GARD:10295","OMIM:300707"],"synonyms":[{"name":"STAR","type":"related"},{"name":"STAR syndrome","type":"exact"},{"name":"STAR syndrome, X-linked dominant","type":"exact"},{"name":"Star syndrome","type":"related"},{"name":"syndactyly with renal and anogenital malformations","type":"related"},{"name":"syndactyly, telecanthus, anogenital and renal malformations","type":"related"},{"name":"syndactyly-telecanthus-anogenital and renal malformations syndrome","type":"exact"},{"name":"toe syndactyly, telecanthus, and anogenital and renal malformations","type":"related"},{"name":"toe syndactyly, telecanthus, anogenital and renal malformations","type":"related"}],"termid":"MONDO:0010408","terms_by_termid":{"MONDO:0010408":null},"xrefs":{"Monarch":{"xref_id":"0010408"}}}


id: MONDO:0043358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A toxicity of hematopoietic stem cell transplantation that manifests as fever, rash and pulmonary deterioration which becomes evident at marrow engraftment. It occurs unexpectedly and is occasionally fatal. It can occur after an autogeneic or an allogeneic hematopoietic cell transplantation.","definition_xrefs":["NCIT:C63324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disease related to hematopoietic stem cell transplant","termid":"MONDO:0700222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engraftment syndrome","secondary_identifiers":["GARD:11909","MEDGEN:214709","SCTID:426768001","UMLS:C0919746"],"synonyms":[{"name":"engraftment syndrome","type":"exact"}],"termid":"MONDO:0043358","xrefs":{"Monarch":{"xref_id":"0043358"}}}


id: PBO:0066747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 45","termid":"PBO:0066747"}


id: GO:0031508
data:
  {"annotated_genes":["SJAG_03543","SJAG_02409","SJAG_02725","SJAG_02846","SJAG_03916","SJAG_01540","SJAG_00756","SJAG_01675","SJAG_03844","SJAG_03624","SJAG_02621","SJAG_03982","SJAG_03680","SJAG_00302","SJAG_04574","SJAG_02576","SJAG_04141","SJAG_04030","SJAG_00142","SJAG_02594","SJAG_04039","SJAG_04061","SJAG_00058","SJAG_03193","SJAG_01008","SJAG_03689","SJAG_00335","SJAG_00087","SJAG_03128","SJAG_01075","SJAG_04942","SJAG_01599","SJAG_03042","SJAG_01601","SJAG_03356","SJAG_04253","SJAG_00934","SJAG_00961","SJAG_01579","SJAG_00414","SJAG_02401","SJAG_03997","SJAG_02119","SJAG_02778"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89561,89725,90781,91581,92332,92947,93586,96231,97760,98631,101507,101508,101509,102267,102710,103575,107623,109938,110723,111556,111655,112064,112065,112066,112737,113431,113861],"is_not":false,"summary":null,"term":"GO:0031508"},{"annotations":[90694],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090053"},{"annotations":[96691,99795],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090052"},{"annotations":[114867,93599,117533,88349,113113,111657,114014,115431,118251,110662,106017,98633,88294,90783,96233,117419,109941,99066,113748,94840,110106,117139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"}]},"cv_name":"biological_process","definition":"The compaction of chromatin located adjacent to the CENP-A rich centromere 'central core' and characterized by methylation of histone H3K9, into heterochromatin, resulting in the repression of transcription at pericentric DNA.","definition_xrefs":["PMID:22729156","GOC:mah","PMID:14612388","PMID:20206496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00142":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00414":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_00961":null,"SJAG_01008":null,"SJAG_01075":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01599":null,"SJAG_01601":null,"SJAG_01675":null,"SJAG_02119":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02576":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_02778":null,"SJAG_02846":null,"SJAG_03042":null,"SJAG_03128":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03543":null,"SJAG_03624":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04030":null,"SJAG_04039":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04253":null,"SJAG_04574":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"pericentric heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030702","GO:1990141"],"synonyms":[{"name":"centric heterochromatin formation","type":"related"},{"name":"centromere chromatin silencing","type":"exact"},{"name":"centromeric heterochromatin biosynthesis","type":"exact"},{"name":"centromeric heterochromatin formation","type":"exact"},{"name":"centromeric silencing","type":"exact"},{"name":"chromatin silencing at centromere","type":"exact"},{"name":"chromatin silencing at centromere outer repeat region","type":"narrow"},{"name":"chromatin silencing at pericentric region","type":"related"},{"name":"heterochromatic silencing at centromere","type":"exact"},{"name":"pericentric heterochromatin assembly","type":"exact"}],"termid":"GO:0031508","terms_by_termid":{"GO:0031508":null,"GO:0090052":null,"GO:0090053":null,"GO:0140727":null}}


id: SO:0002197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen by reverse transcription of a mRNA into cDNA, followed by reintegration into the genome. Therefore, it has lost any intron/exon structure, and it might have a pseudo-polyA-tail.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processed_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:processed","type":"exact"},{"name":"processed pseudogenic tRNA","type":"exact"}],"termid":"SO:0002197"}


id: MONDO:0001274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anus disorder","termid":"MONDO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anal spasm","secondary_identifiers":["DOID:11374","MEDGEN:508910","SCTID:17440005","UMLS:C0152167","icd11.foundation:647005938","ICD9:564.6","ICD10CM:K59.4"],"termid":"MONDO:0001274","xrefs":{"Monarch":{"xref_id":"0001274"}}}


id: GO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by endosomal resident proteases contributing to antigen processing and presentation.","definition_xrefs":["PMID:15771591","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"proteolysis within endosome associated with antigen processing and presentation","synonyms":[{"name":"endosomal proteolysis associated with antigen processing and presentation","type":"exact"}],"termid":"GO:0002499"}


id: GO:0050382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + uracil 5-carboxylate = CO2 + uracil.","definition_xrefs":["RHEA:17685","EC:4.1.1.66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"uracil-5-carboxylate decarboxylase activity","secondary_identifiers":["MetaCyc:URACIL-5-CARBOXYLATE-DECARBOXYLASE-RXN","KEGG_REACTION:R00973"],"synonyms":[{"name":"uracil-5-carboxylate carboxy-lyase (uracil-forming)","type":"related"},{"name":"uracil-5-carboxylate carboxy-lyase activity","type":"related"},{"name":"uracil-5-carboxylic acid decarboxylase activity","type":"related"}],"termid":"GO:0050382"}


id: GO:0051358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the non-fluorescent protein chromophore cross-link from the alpha-carboxyl carbon of residue n, a glutamic acid, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons. This modification is found in the GFP-like non-fluorescent red chromoprotein from the sea anemone Radianthus macrodactylus.","definition_xrefs":["PMID:11682051","RESID:AA0378"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-imino-glutamic acid 5-imidazolinone glycine (obsolete GO:0051358)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-imino-glutamic acid 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-imino-glutamic acid 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051358"}


id: GO:0090278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptide secretion","termid":"GO:0002792"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"negatively_regulates","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"}


id: PBO:0108589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 13B","termid":"PBO:0108589"}


id: PBO:0031010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level","termid":"PBO:0031010"}


id: PBO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 2 (predicted)","termid":"PBO:0000825"}


id: PBO:0064931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG related coactivator 1","termid":"PBO:0064931"}


id: FYPO:0000211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A chemical response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to a chemical is abnormal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cellular response to drug (obsolete FYPO:0000211)","synonyms":[{"name":"abnormal cellular response to drug during vegetative growth","type":"exact"}],"termid":"FYPO:0000211"}


id: MONDO:0012964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 15q is a rare chromosomal anomaly syndrome characterized by pre- and postnatal growth restriction, developmental delay, variable degrees of intellectual disability, hand and foot anomalies (e.g. brachy-/clinodactyly, talipes equinovarus, nail hypoplasia, proximally placed digits) and mild craniofacial dysmorphism (incl. microcephaly, triangular face, broad nasal bridge, micrognathia). Neonatal lymphedema, heart malformations, aplasia cutis congenita, aortic root dilatation, and autistic spectrum disorder have also been reported.","definition_xrefs":["Orphanet:1596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15q26-qter deletion syndrome","secondary_identifiers":["MESH:C567232","MEDGEN:390804","DOID:0060397","OMIM:612626","SCTID:766050000","UMLS:C2675463","GARD:16572"],"synonyms":[{"name":"15q26 deletion syndrome","type":"exact"},{"name":"Drayer syndrome","type":"exact"},{"name":"chromosome 15q26-qter deletion syndrome","type":"exact"},{"name":"chromosome 15q26-qter deletion syndrome, isolated cases","type":"exact"},{"name":"distal 15q deletion syndrome","type":"exact"},{"name":"distal monosomy 15q","type":"exact"},{"name":"distal monosomy type 15q","type":"exact"},{"name":"monosomy 15q26","type":"exact"},{"name":"telomeric 15q deletion syndrome","type":"exact"}],"termid":"MONDO:0012964","xrefs":{"Monarch":{"xref_id":"0012964"}}}


id: GO:0051881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"}


id: PBO:0039195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKNA domain containing 1","termid":"PBO:0039195"}


id: MONDO:0005849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Allergic reaction to milk (usually cow's milk) or milk products. milk hypersensitivity should be differentiated from lactose intolerance, an intolerance to milk as a result of congenital deficiency of lactase.","definition_xrefs":["MESH:D016269"],"gene_count":0,"genotype_count":0,"name":"obsolete milk allergic reaction (obsolete MONDO:0005849)","secondary_identifiers":["DOID:4376"],"synonyms":[{"name":"milk allergic reaction","type":"exact"},{"name":"milk allergy","type":"related"}],"termid":"MONDO:0005849","xrefs":{"Monarch":{"xref_id":"0005849"}}}


id: PBO:0046580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 22","termid":"PBO:0046580"}


id: PBO:0055022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2437","termid":"PBO:0055022"}


id: PBO:0067095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 132, pseudogene","termid":"PBO:0067095"}


id: PBO:0049786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 21","termid":"PBO:0049786"}


id: PBO:0005291
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains CuSE","termid":"PBO:0005291"}


id: PBO:0005364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ucp12 (predicted)","termid":"PBO:0005364"}


id: GO:0018948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylene metabolic process","synonyms":[{"name":"xylene metabolism","type":"exact"}],"termid":"GO:0018948"}


id: GO:0046527
data:
  {"annotated_genes":["SJAG_01950","SJAG_00129","SJAG_02222","SJAG_01427","SJAG_04236","SJAG_03587","SJAG_00876","SJAG_03764","SJAG_03656","SJAG_00394","SJAG_04571","SJAG_01531","SJAG_01288","SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91107,93970,105575,112607,115265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[96026,92850,100552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[117232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033840"},{"annotations":[115266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[89887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042283"},{"annotations":[97898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106073"},{"annotations":[108751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042281"},{"annotations":[110538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[113207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00394":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01950":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_04236":null,"SJAG_04571":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046527","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004581":null,"GO:0033840":null,"GO:0042281":null,"GO:0042283":null,"GO:0106073":null,"GO:0140752":null}}


id: PBO:0080350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 2 pseudogene","termid":"PBO:0080350"}


id: GO:0080013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranyl-geranyl diphosphate + H2O = (E,E)-geranyllinalool + diphosphate.","definition_xrefs":["PMID:18398052","MetaCyc:RXN-10441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(E,E)-geranyllinalool synthase activity","secondary_identifiers":["RHEA:38155"],"termid":"GO:0080013"}


id: GO:0030077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane protein-pigment complex that may be closely or peripherally associated to photosynthetic reaction centers that participate in harvesting and transferring radiant energy to the reaction center. Examples of this complex are found in bacterial species.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light-harvesting complex","termid":"GO:0030076"},{"relation_name":"part_of","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"plasma membrane-derived chromatophore","termid":"GO:0042716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"plasma membrane light-harvesting complex","termid":"GO:0030077"}


id: PBO:0060170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maturin, neural progenitor differentiation regulator homolog","termid":"PBO:0060170"}


id: MONDO:1011089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal dysplasia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal dysplasia, non-human animal","termid":"MONDO:1010268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal dysplasia, horse","secondary_identifiers":["OMIA:001135-9796"],"termid":"MONDO:1011089","xrefs":{"Monarch":{"xref_id":"1011089"}}}


id: MONDO:0100197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus. There are four serotypes which cause respiratory illnesses in children and adults.","definition_xrefs":["OMOP:4008269","PMID:27486735","SCTID:12188008","MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Paramyxoviridae infectious disease","termid":"MONDO:0005896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza infectious disease","synonyms":[{"name":"HPIV infectious disorder","type":"exact"},{"name":"human parainfluenza virus infectious disorder","type":"related"},{"name":"human parainfluenza viruses infectious disorder","type":"related"},{"name":"parainfluenza (disorder)","type":"exact"},{"name":"parainfluenza infectious disorder","type":"exact"}],"termid":"MONDO:0100197","xrefs":{"Monarch":{"xref_id":"0100197"}}}


id: GO:0019342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trypanothione (N1,N6,-bis(glutathionyl)spermidine) in two steps from glutathione and spermidine via an N1- or N8-glutathionylspermidine intermediate. Trypanothione appears to be an essential redox intermediate in intracellular thiol redox regulation. It also plays a role in protecting against oxidative stress.","definition_xrefs":["PMID:9677355","MetaCyc:TRYPANOSYN-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trypanothione metabolic process","termid":"GO:0046206"},{"relation_name":"is_a","term_name":"glutathione derivative biosynthetic process","termid":"GO:1901687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"trypanothione biosynthetic process","synonyms":[{"name":"trypanothione anabolism","type":"exact"},{"name":"trypanothione biosynthesis","type":"exact"},{"name":"trypanothione formation","type":"exact"},{"name":"trypanothione synthesis","type":"exact"}],"termid":"GO:0019342"}


id: FYPO:0006731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the CMG complex moves away from replication origins to a lesser extent than normal.","definition_xrefs":["PMID:22718908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication elongation","termid":"FYPO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased CMG complex progression from replication origin","synonyms":[{"name":"decreased CMG complex translocation from replication origin","type":"exact"},{"name":"decreased replicative helicase progression from replication origin","type":"exact"},{"name":"reduced CMG complex progression from replication origin","type":"exact"}],"termid":"FYPO:0006731"}


id: GO:1903351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dopamine stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:11118945","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to catecholamine stimulus","termid":"GO:0071870"},{"relation_name":"is_a","term_name":"response to dopamine","termid":"GO:1903350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dopamine","termid":"GO:1903351"}


id: MONDO:0005013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive morphologic variant of chondrosarcoma. It is composed of a low grade chondrosarcoma and a high grade non-cartilagenous sarcomatous component. Due to the aggressive nature of the disease, its prognosis is poor.","definition_xrefs":["NCIT:C6476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone chondrosarcoma","termid":"MONDO:0000515"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"dedifferentiated chondrosarcoma","secondary_identifiers":["MEDGEN:209021","DOID:0081247","ICDO:9243/3","EFO:0000394","ONCOTREE:DDCHS","UMLS:C0862878"],"synonyms":[{"name":"DDCHS","type":"related"},{"name":"Dedifferentiated chondrosarcoma","type":"exact"}],"termid":"MONDO:0005013","xrefs":{"Monarch":{"xref_id":"0005013"}}}


id: GO:0004181
data:
  {"annotated_genes":["SJAG_03586","SJAG_00451"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73798,93975],"is_not":false,"summary":null,"term":"GO:0004181"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single C-terminal amino acid residue from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.","direct_ancestors":[{"relation_name":"is_a","term_name":"carboxypeptidase activity","termid":"GO:0004180"},{"relation_name":"is_a","term_name":"metalloexopeptidase activity","termid":"GO:0008235"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00451":null,"SJAG_03586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0008233","GO:0016787"],"is_obsolete":false,"name":"metallocarboxypeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8955712","EC:3.4.17.-","Reactome:R-HSA-8852809","Reactome:R-HSA-2022378","Reactome:R-HSA-2022379","Reactome:R-HSA-9023163","Reactome:R-HSA-2028294","Reactome:R-HSA-8866105","Reactome:R-HSA-9023159"],"termid":"GO:0004181","terms_by_termid":{"GO:0004181":null}}


id: GO:0033538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ajugose, the hexasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside, by a pathway in which galactan:galactan galactosyltransferase catalyzes chain elongation by transferring the alpha-galactosyl residue of one raffinose-family oligosaccharide to another.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ajugose biosynthetic process","termid":"GO:0033536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"ajugose biosynthetic process using galactan:galactan galactosyltransferase","synonyms":[{"name":"ajugose anabolism using galactan:galactan galactosyltransferase","type":"exact"},{"name":"ajugose biosynthesis using galactan:galactan galactosyltransferase","type":"exact"},{"name":"ajugose formation using galactan:galactan galactosyltransferase","type":"exact"},{"name":"ajugose synthesis using galactan:galactan galactosyltransferase","type":"exact"}],"termid":"GO:0033538"}


id: PBO:0003100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Pep12","termid":"PBO:0003100"}


id: MONDO:0033642
data:
  {"annotated_genes":["SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85293],"is_not":false,"summary":null,"term":"MONDO:0033642"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of ornithine metabolism","termid":"MONDO:0017356"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"disorder of polyamine metabolism","termid":"MONDO:0800159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with alopecia and brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17987","MEDGEN:1775930","OMIM:619075","Orphanet:544488","UMLS:C5436741"],"synonyms":[{"name":"Bachmann-Bupp syndrome","type":"exact"},{"name":"NEDABA","type":"exact"},{"name":"global developmental delay-alopecia-macrocephaly-facial dysmorphism-structural brain anomalies syndrome","type":"exact"}],"termid":"MONDO:0033642","terms_by_termid":{"MONDO:0033642":null},"xrefs":{"Monarch":{"xref_id":"0033642"}}}


id: MOD:00318
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tryptophan residue by a thioether bond to form 4'-(S-L-cysteinyl)-L-tryptophyl quinone.","definition_xrefs":["PubMed:11555656","PubMed:11717396","RESID:AA0313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"4'-(S-L-cysteinyl)-L-tryptophyl quinone","synonyms":[{"name":"(2R)-2-amino-3-[(3-[(2S)-2-amino-2-carboxyethyl]-6,7-dioxo-6,7-dihydro-1H-indol-4-yl)sulfanyl]propanoic acid","type":"exact"},{"name":"3-(2-amino-2-carboxyethyl)-4-[2-amino-2-carboxyethyl]sulfanyl-6,7-indolinedione","type":"exact"},{"name":"4'-(L-cystein-S-yl)-L-tryptophyl quinone","type":"exact"},{"name":"4-(S-cysteinyl)tryptophan-6,7-dione","type":"exact"},{"name":"CROSSLNK 4'-cysteinyl-tryptophylquinone (Cys-Trp)","type":"exact"},{"name":"CTQ","type":"exact"},{"name":"cysteine tryptophylquinone","type":"exact"}],"termid":"MOD:00318"}


id: PBO:0014614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA complementary to adh1, major transcript","termid":"PBO:0014614"}


id: GO:0004826
data:
  {"annotated_genes":["SJAG_02206","SJAG_03626","SJAG_02615"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93134,96713,117479],"is_not":false,"summary":null,"term":"GO:0004826"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe).","definition_xrefs":["EC:6.1.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02206":null,"SJAG_02615":null,"SJAG_03626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"phenylalanine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PHENYLALANINE--TRNA-LIGASE-RXN","RHEA:19413","Reactome:R-HSA-379848","Reactome:R-HSA-380203"],"synonyms":[{"name":"L-phenylalanine:tRNAPhe ligase (AMP-forming) activity","type":"related"},{"name":"L-phenylalanyl-tRNA synthetase activity","type":"related"},{"name":"phenylalanine translase activity","type":"related"},{"name":"phenylalanine-tRNA synthetase activity","type":"related"},{"name":"phenylalanyl-tRNA ligase activity","type":"related"},{"name":"phenylalanyl-tRNA synthetase activity","type":"exact"},{"name":"phenylalanyl-transfer RNA ligase activity","type":"related"},{"name":"phenylalanyl-transfer RNA synthetase activity","type":"related"},{"name":"phenylalanyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004826","terms_by_termid":{"GO:0004826":null}}


id: GO:0043326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of folate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to folate","termid":"GO:0043326"}


id: GO:1901147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in metanephric nephron morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900200"},{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}


id: GO:0031136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate or frequency of conjugation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of conjugation (obsolete GO:0031136)","synonyms":[{"name":"activation of conjugation","type":"narrow"},{"name":"stimulation of conjugation","type":"narrow"},{"name":"up regulation of conjugation","type":"exact"},{"name":"up-regulation of conjugation","type":"exact"},{"name":"upregulation of conjugation","type":"exact"}],"termid":"GO:0031136"}


id: GO:0140202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a polyamine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:17218313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"polyamine import across plasma membrane","termid":"GO:0140202"}


id: PBO:0057234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 421","termid":"PBO:0057234"}


id: GO:1904333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of error-prone translesion synthesis.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000058","PMID:22761594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of error-prone translesion synthesis","termid":"GO:1904331"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"},{"relation_name":"positively_regulates","term_name":"error-prone translesion synthesis","termid":"GO:0042276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"positive regulation of error-prone translesion synthesis","secondary_identifiers":["Reactome:R-HSA-110314"],"synonyms":[{"name":"activation of error-prone postreplication DNA repair","type":"related"},{"name":"activation of error-prone translesion synthesis","type":"narrow"},{"name":"activation of mutagenic PRR","type":"narrow"},{"name":"activation of mutagenic postreplication DNA repair","type":"related"},{"name":"positive regulation of error-prone postreplication DNA repair","type":"related"},{"name":"positive regulation of mutagenic PRR","type":"exact"},{"name":"positive regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"up regulation of error-prone postreplication DNA repair","type":"related"},{"name":"up regulation of error-prone translesion synthesis","type":"exact"},{"name":"up regulation of mutagenic PRR","type":"exact"},{"name":"up regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"up-regulation of error-prone postreplication DNA repair","type":"related"},{"name":"up-regulation of error-prone translesion synthesis","type":"exact"},{"name":"up-regulation of mutagenic PRR","type":"exact"},{"name":"up-regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"upregulation of error-prone postreplication DNA repair","type":"related"},{"name":"upregulation of error-prone translesion synthesis","type":"exact"},{"name":"upregulation of mutagenic PRR","type":"exact"},{"name":"upregulation of mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:1904333"}


id: PBO:0090994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoadipate transaminase/kynurenine-oxoglutarate transaminase","termid":"PBO:0090994"}


id: MONDO:0001840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete schistosomiasis (obsolete MONDO:0001840)","termid":"MONDO:0001840","xrefs":{"Monarch":{"xref_id":"0001840"}}}


id: GO:0035830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving palmatine, a berberine alkaloid found in many plants.","definition_xrefs":["PMID:25285405","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"palmatine metabolic process","synonyms":[{"name":"palmatine metabolism","type":"exact"}],"termid":"GO:0035830"}


id: GO:0042770
data:
  {"annotated_genes":["SJAG_03898","SJAG_01677","SJAG_01044","SJAG_00486","SJAG_00169","SJAG_00364","SJAG_02771","SJAG_03529","SJAG_03026","SJAG_00640","SJAG_00327","SJAG_02098","SJAG_04287","SJAG_02026","SJAG_02563","SJAG_01205","SJAG_00623","SJAG_03942","SJAG_04280","SJAG_01873","SJAG_04671","SJAG_01855","SJAG_01146","SJAG_01084","SJAG_00429","SJAG_01429","SJAG_01708","SJAG_02576","SJAG_03048","SJAG_01605","SJAG_02266","SJAG_03160","SJAG_04332","SJAG_03720","SJAG_05373","SJAG_01680","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000077"},{"annotations":[101847,91301,93066,108773,110650,98690,115678,79553,106083,113702,93444,77532,113912,117151,115449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[109132,90817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[113703,100029,93446,116461,89724,106085,98859,90942,91302,108775,100543,88062,111180,117152,88633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[111181,89959,101013,92036,95515,98860,90943,100348,115507,94046,88063,115506,106086,98692,107131,111485,88634,88679,101849,116548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A cascade of processes induced by the detection of DNA damage within a cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response","termid":"GO:0006974"},{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01044":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03529":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"signal transduction in response to DNA damage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006975"],"synonyms":[{"name":"DNA damage induced protein phosphorylation","type":"narrow"},{"name":"DNA damage response, signal transduction","type":"exact"},{"name":"response to DNA damage stimulus by intracellular signaling cascade","type":"exact"}],"termid":"GO:0042770","terms_by_termid":{"GO:0000077":null,"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0044773":null}}


id: PBO:0060000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 20","termid":"PBO:0060000"}


id: FYPO:0002184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and tapered vegetative cells. The tapered cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and tapered cells (obsolete FYPO:0002184)","synonyms":[{"name":"inviable mixed population including spores, germinated spores and bottle/skittle cells","type":"exact"},{"name":"inviable mixed population including spores, germinated spores and skittle-shaped cells","type":"exact"}],"termid":"FYPO:0002184"}


id: GO:0001961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a cytokine mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of response to cytokine stimulus","termid":"GO:0060760"},{"relation_name":"positively_regulates","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytokine-mediated signaling pathway","synonyms":[{"name":"activation of cytokine mediated signaling pathway","type":"narrow"},{"name":"positive regulation of cytokine and chemokine mediated signaling pathway","type":"exact"},{"name":"positive regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"positive regulation of cytokine mediated signalling pathway","type":"exact"},{"name":"stimulation of cytokine mediated signaling pathway","type":"narrow"},{"name":"up regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"up-regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"upregulation of cytokine mediated signaling pathway","type":"exact"}],"termid":"GO:0001961"}


id: GO:1903554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway that is involved in the defense response to Gram-negative bacterium.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:25303524","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"defense response to Gram-negative bacterium","termid":"GO:0050829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in defense response to Gram-negative bacterium","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G protein coupled receptor protein signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor protein signal transduction involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"GPCR signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"GPCR signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"}],"termid":"GO:1903554"}


id: GO:0141193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a signaling molecule binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:25614732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular receptor signaling pathway","termid":"GO:0030522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nuclear receptor-mediated signaling pathway","synonyms":[{"name":"nuclear receptor signaling pathway","type":"exact"}],"termid":"GO:0141193"}


id: PBO:0109317
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome Loss when Overexpressed","termid":"PBO:0109317"}


id: PBO:0075316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 7","termid":"PBO:0075316"}


id: PBO:0049684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXD antisense growth-associated long non-coding RNA","termid":"PBO:0049684"}


id: PATO:0000577
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000577 weight value (obsolete PATO:0000577)","termid":"PATO:0000577"}


id: PBO:0069342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 602, pseudogene","termid":"PBO:0069342"}


id: GO:1901999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving homogentisate.","definition_xrefs":["GOC:TermGenie","PMID:22980205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"homogentisate metabolic process","synonyms":[{"name":"homogentisate metabolism","type":"exact"}],"termid":"GO:1901999"}


id: PBO:0073900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 14 member 1 (Kidd blood group)","termid":"PBO:0073900"}


id: PBO:0046293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMP2 pseudogene 1","termid":"PBO:0046293"}


id: PBO:0062347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily K member 6","termid":"PBO:0062347"}


id: PBO:0052601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit beta 1","termid":"PBO:0052601"}


id: GO:0034443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lipoprotein oxidation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein oxidation","termid":"GO:0034442"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein metabolic process","termid":"GO:0050748"},{"relation_name":"negatively_regulates","term_name":"lipoprotein oxidation","termid":"GO:0042161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein oxidation","synonyms":[{"name":"inhibition of lipoprotein oxidation","type":"narrow"}],"termid":"GO:0034443"}


id: PBO:0077941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 2-1","termid":"PBO:0077941"}


id: MONDO:0022656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy spherocytosis","termid":"MONDO:0022656","xrefs":{"Monarch":{"xref_id":"0022656"}}}


id: PBO:0029280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle_pole_body_during_metaphase","termid":"PBO:0029280"}


id: PBO:0030084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_tip","termid":"PBO:0030084"}


id: MONDO:1011029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An early onset syndrome of impaired neuromuscular transmission associated with a defect in acetylcholine synthesis in dogs due to a variation in the CHAT gene.","definition_xrefs":["PMID:32668077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"congenital neuromuscular disease, non-human animal","termid":"MONDO:1011851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myasthenic syndrome, CHAT-related, dog","secondary_identifiers":["OMIA:002072-9615"],"termid":"MONDO:1011029","xrefs":{"Monarch":{"xref_id":"1011029"}}}


id: MONDO:0017073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myelomeningocele","termid":"MONDO:0019773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cervical spina bifida cystica","secondary_identifiers":["GARD:20962","Orphanet:268762"],"termid":"MONDO:0017073","xrefs":{"Monarch":{"xref_id":"0017073"}}}


id: PBO:0053232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligatin","termid":"PBO:0053232"}


id: MONDO:0020463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital ectropion that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital ectropion","termid":"MONDO:0020161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated congenital ectropion","secondary_identifiers":["GARD:19673","UMLS:C5681630","Orphanet:99171","MEDGEN:1842688"],"synonyms":[{"name":"nonsyndromic congenital ectropion","type":"exact"}],"termid":"MONDO:0020463","xrefs":{"Monarch":{"xref_id":"0020463"}}}


id: PBO:0071060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 62","termid":"PBO:0071060"}


id: PBO:0111839
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kar3 subfamily","termid":"PBO:0111839"}


id: FYPO:0003784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and all cells produced arrest the cell cycle with a septum and a nucleus in one compartment, and then die.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable septated mononucleate vegetative cell","termid":"FYPO:0002000"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, arrest with single nucleus","termid":"FYPO:0003759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, arrest with septated mononucleate cell","synonyms":[{"name":"inviable after spore germination, single or double cell division, arrest with septated cell and single nucleus","type":"exact"},{"name":"inviable following spore germination, single or double cell division, arrest with septated mononucleate cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, arrest with septated mononucleate cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, arrest with septated mononucleate cell","type":"exact"}],"termid":"FYPO:0003784"}


id: GO:0046571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-keto-4-methylthiobutyrate + aspartate = methionine + oxaloacetate.","definition_xrefs":["MetaCyc:R15-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartate-2-keto-4-methylthiobutyrate transaminase activity (obsolete GO:0046571)","termid":"GO:0046571"}


id: GO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An extrinsic apoptotic signaling pathway initiated by the binding of the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) to a death receptor on the cell surface.","definition_xrefs":["GOC:bf","PMID:21785459","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:0036462"}


id: GO:0045341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of major histocompatibility protein class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"MHC class I biosynthetic process","synonyms":[{"name":"MHC class I anabolism","type":"exact"},{"name":"MHC class I biosynthesis","type":"exact"},{"name":"MHC class I formation","type":"exact"},{"name":"MHC class I synthesis","type":"exact"},{"name":"major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"major histocompatibility complex class I biosynthetic process","type":"exact"}],"termid":"GO:0045341"}


id: PBO:0082812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved cysteine protease required for autophagy; cleaves Atg8p to a form required for autophagosome and Cvt vesicle generation","termid":"PBO:0082812"}


id: GO:0047849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->6)-alpha-D-glucosyl](n) + sucrose = [(1->6)-alpha-D-glucosyl](n+1) + D-fructose.","definition_xrefs":["RHEA:18825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"dextransucrase activity","secondary_identifiers":["EC:2.4.1.5","MetaCyc:2.4.1.125-RXN"],"synonyms":[{"name":"CEP","type":"related"},{"name":"SGE","type":"related"},{"name":"sucrose 6-glucosyltransferase activity","type":"related"},{"name":"sucrose-1,6-alpha-glucan glucosyltransferase activity","type":"related"},{"name":"sucrose:1,6-alpha-D-glucan 6-alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0047849"}


id: MONDO:0020806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heart block that is initiated in the sinoatrial node.","definition_xrefs":["Wikipedia:Sinoatrial_block"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sinoatrial block","secondary_identifiers":["icd11.foundation:884453307","MEDGEN:19984","MESH:D012848","UMLS:C0037188","SCTID:65778007"],"termid":"MONDO:0020806","xrefs":{"Monarch":{"xref_id":"0020806"}}}


id: MONDO:0009306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency with skin granulomas","secondary_identifiers":["Orphanet:157949","UMLS:C2673536","GARD:13587","MESH:C567115","MEDGEN:435945","DOID:0112253","OMIM:233650"],"synonyms":[{"name":"CCHIDG","type":"related"},{"name":"CID due to RAG 1/2 deficiency","type":"exact"},{"name":"combined cellular and humoral immune defects with granulomas","type":"related"},{"name":"combined immunodeficiency due to RAG 1/2 deficiency","type":"exact"}],"termid":"MONDO:0009306","xrefs":{"Monarch":{"xref_id":"0009306"}}}


id: GO:0008545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of tyrosine and threonine residues in a c-Jun NH2-terminal kinase (JNK), a member of a subgroup of mitogen-activated protein kinases (MAPKs), which signal in response to cytokines and exposure to environmental stress. JUN kinase kinase (JNKK) is a dual-specificity protein kinase kinase and requires activation by a serine/threonine kinase JUN kinase kinase kinase.","definition_xrefs":["PMID:11057897","PMID:11790549","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAP kinase kinase activity","termid":"GO:0004708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004672","GO:0016301","GO:0003674","GO:0016740","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"JUN kinase kinase activity","secondary_identifiers":["Reactome:R-HSA-168162"],"synonyms":[{"name":"JNKK","type":"exact"}],"termid":"GO:0008545"}


id: PBO:0072189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 6","termid":"PBO:0072189"}


id: PBO:0071848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 43","termid":"PBO:0071848"}


id: PBO:0039504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 26 pseudogene 2","termid":"PBO:0039504"}


id: FYPO:0006514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology","termid":"FYPO:0006512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere structure","synonyms":[{"name":"normal chromosome structure at telomere","type":"exact"},{"name":"normal chromosome structure at telomeric region","type":"exact"},{"name":"normal telomeric region structure","type":"exact"}],"termid":"FYPO:0006514"}


id: PBO:0091200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala","termid":"PBO:0091200"}


id: PBO:0017809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transmembrane transporter Vht1","termid":"PBO:0017809"}


id: FYPO:0002941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen cell","termid":"FYPO:0000025"},{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"swollen spheroid cell","synonyms":[{"name":"enlarged spheroid cell","type":"related"},{"name":"enlarged volume spheroid cell","type":"exact"},{"name":"large spheroid cell","type":"related"},{"name":"spheroid cell with increased cell size","type":"related"},{"name":"spheroid cell with increased cell volume","type":"exact"},{"name":"swollen rounded cell","type":"exact"}],"termid":"FYPO:0002941"}


id: PBO:0048903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A7","termid":"PBO:0048903"}


id: MONDO:1010965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cauda equina syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cauda equina syndrome, non-human animal","termid":"MONDO:1010227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauda equina syndrome, dog","secondary_identifiers":["OMIA:000170-9615"],"termid":"MONDO:1010965","xrefs":{"Monarch":{"xref_id":"1010965"}}}


id: PBO:0077737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tensin 4","termid":"PBO:0077737"}


id: PBO:0087626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo; capable of binding Q/N rich proteins and mediating their folding","termid":"PBO:0087626"}


id: GO:0018096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of (S,Z)-S-(2-aminovinyl)cysteine forming an intra-polypeptide cross-link between serine and cysteine.","definition_xrefs":["RESID:AA0204"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-(2-aminovinyl)-D-cysteine (obsolete GO:0018096)","termid":"GO:0018096"}


id: PBO:0072385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 11","termid":"PBO:0072385"}


id: GO:0005996
data:
  {"annotated_genes":["SJAG_03903","SJAG_01414","SJAG_00461","SJAG_04276","SJAG_02950","SJAG_01209","SJAG_02951","SJAG_02135","SJAG_03822","SJAG_01784","SJAG_03743","SJAG_03818","SJAG_00605","SJAG_06622","SJAG_03174","SJAG_04192","SJAG_00070","SJAG_01402","SJAG_02596","SJAG_02107","SJAG_02369","SJAG_02783","SJAG_04334","SJAG_00027","SJAG_02796","SJAG_02713","SJAG_00134","SJAG_03958","SJAG_01310","SJAG_03336","SJAG_02945","SJAG_02696","SJAG_00240","SJAG_06621","SJAG_02148","SJAG_03373","SJAG_03660","SJAG_02297","SJAG_04660","SJAG_03370","SJAG_05006","SJAG_00839","SJAG_02010","SJAG_04495","SJAG_03828","SJAG_00039","SJAG_02009","SJAG_02954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95255,100672,94521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[108852,108850,108851,94030,97772,105294,108387,104924,108385,103126,104926,108388,97494,105295,108386,102870,103949,108390,108848,94517,108849,108854,115796,104925,108384,108389,108853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[103837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[88453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006014"},{"annotations":[94523,100673,95256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[118456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042732"},{"annotations":[88485,100864,94031,99442,92368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006000"},{"annotations":[108356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019388"},{"annotations":[113159,113170,113152,113158,109052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006012"},{"annotations":[115282,96483,96394,94032,117881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006006"},{"annotations":[114058,114059,98229,88021,98230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[88716,94034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006013"},{"annotations":[96079],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[98533],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010906"},{"annotations":[118457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving monosaccharides, the simplest carbohydrates. They are polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00039":null,"SJAG_00070":null,"SJAG_00134":null,"SJAG_00240":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01209":null,"SJAG_01310":null,"SJAG_01402":null,"SJAG_01414":null,"SJAG_01784":null,"SJAG_02009":null,"SJAG_02010":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02297":null,"SJAG_02369":null,"SJAG_02596":null,"SJAG_02696":null,"SJAG_02713":null,"SJAG_02783":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03174":null,"SJAG_03336":null,"SJAG_03370":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03743":null,"SJAG_03818":null,"SJAG_03822":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03958":null,"SJAG_04192":null,"SJAG_04276":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04660":null,"SJAG_05006":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"monosaccharide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"monosaccharide metabolism","type":"exact"}],"termid":"GO:0005996","terms_by_termid":{"GO:0005998":null,"GO:0006000":null,"GO:0006006":null,"GO:0006012":null,"GO:0006013":null,"GO:0006014":null,"GO:0010906":null,"GO:0019303":null,"GO:0019388":null,"GO:0019568":null,"GO:0019655":null,"GO:0042732":null,"GO:0042843":null,"GO:0061621":null,"GO:2001172":null}}


id: GO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"In organisms that undergo conjugation with cellular fusion, the process resulting in desensitization following exposure to pheromone stimulus that act to down-regulate further stimulation or block initial conjugation responses. An example of this is the adaptation to pheromone during conjugation with cellular fusion in Saccharomyces cerevisiae.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptation of signaling pathway","termid":"GO:0023058"},{"relation_name":"part_of","term_name":"response to pheromone triggering conjugation with cellular fusion","termid":"GO:0000749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion","secondary_identifiers":["GO:0007331","GO:0030453"],"synonyms":[{"name":"adaptation of signalling pathway by response to pheromone involved in conjugation with cellular fusion","type":"exact"},{"name":"adaptation to pheromone during conjugation with cellular fusion","type":"related"},{"name":"desensitization to pheromone during conjugation with cellular fusion","type":"exact"}],"termid":"GO:0000754"}


id: GO:0009889
data:
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id: FYPO:0006038
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which the initiation of translation in the cytoplasm is normal (i.e. indistinguishable from wild type). Translational initiation is he process preceding formation of the peptide bond between the first two amino acids of a protein in the cytoplasm.","definition_xrefs":["PomBase:mah","GO:0002183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cytoplasmic translational initiation","synonyms":[{"name":"normal cytoplasmic translation initiation","type":"exact"},{"name":"normal cytoplasmic translational initiation during mitotic cell cycle","type":"related"},{"name":"normal cytoplasmic translational initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006038"}


id: PBO:0078967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (AGA) 6-1","termid":"PBO:0078967"}


id: MONDO:1012555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve dysplasia, non-human animal","termid":"MONDO:1011652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve dysplasia, domestic cat","secondary_identifiers":["OMIA:002521-9685"],"termid":"MONDO:1012555","xrefs":{"Monarch":{"xref_id":"1012555"}}}


id: GO:0019236
data:
  {"annotated_genes":["SJAG_03209","SJAG_01978","SJAG_01718","SJAG_01345","SJAG_02923","SJAG_00993","SJAG_03340","SJAG_00990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88746,95880,96547,91696,105746,92827],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[87656],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000750"},{"annotations":[104992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000749"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02923":null,"SJAG_03209":null,"SJAG_03340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pheromone","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pheromone response","type":"exact"}],"termid":"GO:0019236","terms_by_termid":{"GO:0000749":null,"GO:0000750":null,"GO:0071507":null}}


id: PBO:0045680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1","termid":"PBO:0045680"}


id: PBO:0002718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Noc1 (predicted)","termid":"PBO:0002718"}


id: PBO:0030483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sodium_export","termid":"PBO:0030483"}


id: MOD:00273
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues, two L-glutamic acid residues, an L-histidine residue and a four-iron three-sulfur three-oxygen cluster to tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino tetrairon disulfide trioxide.","definition_xrefs":["RESID:AA0268","PubMed:12764602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino tetrairon disulfide trioxide","synonyms":[{"name":"4Fe-2S-3O cluster","type":"exact"},{"name":"METAL Iron-oxo-sulfur (4Fe-2O-2S)","type":"exact"},{"name":"METAL Iron-oxo-sulfur (4Fe-2O-2S); via persulfide group","type":"exact"},{"name":"METAL Iron-oxo-sulfur (4Fe-2O-2S); via tele nitrogen","type":"exact"},{"name":"hybrid four iron cluster 2","type":"exact"},{"name":"mu-1:2kappaO-oxido-mu-1:3kappaO-oxido-mu-2:4kappaO-oxido-mu-3:4kappaS-sulfido-mu3-2:3:4kappaS-sulfido-S-cysteinyl-N1'-histidino-O5-glutamato 1-iron-S5-cysteine persulfido-O5-glutamato 2-iron-3,4-bis-(S-cysteinyl iron)","type":"exact"},{"name":"prismane iron-sulfur cofactor","type":"related"},{"name":"tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino tetrairon disulfide trioxide","type":"exact"}],"termid":"MOD:00273"}


id: MONDO:0020058
data:
  {"annotated_genes":["SJAG_02035","SJAG_04663","SJAG_01465","SJAG_03635","SJAG_04324","SJAG_03286","SJAG_00786"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85512,85514,85513,85518,85515,85516,85517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"}]},"cv_name":"mondo","definition":"Chromosomal disorder in which the chromosomal anomaly involves an gonosome. A gonosome is a chromosome responsible for sex determination. In humans and most animals, the sex chromosomes are designated X and Y.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00786":null,"SJAG_01465":null,"SJAG_02035":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_04324":null,"SJAG_04663":null},"genotype_count":0,"is_obsolete":false,"name":"gonosome anomaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:95462004","Orphanet:98155","ICD9:758.8","ICD9:758.81"],"synonyms":[{"name":"Sex-chromosome anomaly","type":"exact"}],"termid":"MONDO:0020058","terms_by_termid":{"MONDO:0010767":null},"xrefs":{"Monarch":{"xref_id":"0020058"}}}


id: GO:0060034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features cells that make up the notochord. Differentiation includes the processes involved in commitment of a cell to a notochord cell fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"notochord development","termid":"GO:0030903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord cell differentiation","termid":"GO:0060034"}


id: MONDO:0020217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary dysgenetic glaucoma associated with neural crest cell migration anomaly (obsolete MONDO:0020217)","secondary_identifiers":["Orphanet:98632"],"synonyms":[{"name":"glaucoma associated with neural crest cell migration anomaly","type":"related"}],"termid":"MONDO:0020217","xrefs":{"Monarch":{"xref_id":"0020217"}}}


id: MONDO:0008751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"familial hypoaldosteronism","termid":"MONDO:0018541"},{"relation_name":"is_a","term_name":"steroid metabolism disease","termid":"MONDO:0045012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"corticosterone methyloxidase type 1 deficiency","secondary_identifiers":["MEDGEN:82784","DOID:0080626","GARD:5660","OMIM:203400","SCTID:47757001","UMLS:C0268293"],"synonyms":[{"name":"18 Hydroxylase deficiency","type":"related"},{"name":"18 alpha hydroxylase deficiency","type":"related"},{"name":"18-Hydroxylase deficiency","type":"related"},{"name":"18-hydroxycorticosterone dehydrogenase deficiency","type":"related"},{"name":"18-hydroxylase deficiency","type":"related"},{"name":"CAH - 18-hydroxylase deficiency","type":"related"},{"name":"CMO 1 deficiency","type":"related"},{"name":"CMO I deficiency","type":"related"},{"name":"CMO II deficiency","type":"related"},{"name":"aldosterone deficiency 1","type":"related"},{"name":"aldosterone deficiency due to 18-hydroxylase defect","type":"related"},{"name":"aldosterone deficiency due to 18-hydroxysteroid dehydrogenase deficiency","type":"related"},{"name":"aldosterone deficiency due to defect in 18 hydroxylase","type":"related"},{"name":"aldosterone deficiency due to defect in steroid 18-Hydroxylase","type":"related"},{"name":"corticosterone 18-monooxygenase deficiency","type":"exact"},{"name":"corticosterone methyl oxidase type I deficiency","type":"related"},{"name":"corticosterone methyl oxidase type II deficiency","type":"related"},{"name":"corticosterone methyloxidase type 1 deficiency","type":"exact"},{"name":"corticosterone methyloxidase type I deficiency","type":"related"},{"name":"hyperreninemic hypoaldosteronism, familial, 1","type":"related"},{"name":"hypoaldosteronism, congenital, due to cmo i deficiency","type":"exact"},{"name":"steroid 18-hydroxylase deficiency","type":"related"}],"termid":"MONDO:0008751","xrefs":{"Monarch":{"xref_id":"0008751"}}}


id: MOD:00050
data:
  {"annotated_genes":["SJAG_02522","SJAG_00733"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80001,80290],"is_not":false,"summary":null,"term":"MOD:00050"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-acetyl-L-alanine.","definition_xrefs":["PubMed:4700463","RESID:AA0041","PubMed:363452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00733":null,"SJAG_02522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-alanine","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"(2S)-2-(acetamido)propanoic acid","type":"exact"},{"name":"2-(acetylamino)propanoic acid","type":"exact"},{"name":"2-(acetylazanyl)propanoic acid","type":"exact"},{"name":"AcAla","type":"exact"},{"name":"MOD_RES N-acetylalanine","type":"exact"},{"name":"N-acetyl-L-alanine","type":"exact"},{"name":"N-acetylated L-alanine","type":"exact"},{"name":"acetylalanine","type":"exact"}],"termid":"MOD:00050","terms_by_termid":{"MOD:00050":null}}


id: FYPO:0004249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuolar membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to vacuolar membrane","synonyms":[{"name":"abnormal protein localisation to vacuolar membrane","type":"exact"},{"name":"abnormal protein localization in vacuolar membrane","type":"exact"},{"name":"abnormal protein localization to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to vacuolar membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization to vacuole membrane","type":"exact"}],"termid":"FYPO:0004249"}


id: MONDO:0002416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the mucosal epithelial surface of the ethmoid sinus. Patients may present with nasal fullness, obstruction, and/or epistaxis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethmoid sinus cancer","termid":"MONDO:0001763"},{"relation_name":"is_a","term_name":"paranasal sinus squamous cell carcinoma","termid":"MONDO:0044705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ethmoid sinus squamous cell carcinoma","secondary_identifiers":["UMLS:C1333477","DOID:2763","NCIT:C6065","SCTID:707359008","MEDGEN:272596"],"synonyms":[{"name":"epidermoid carcinoma of ethmoid sinus","type":"exact"},{"name":"epidermoid carcinoma of ethmoidal sinus","type":"exact"},{"name":"epidermoid carcinoma of the ethmoid sinus","type":"exact"},{"name":"epidermoid carcinoma of the ethmoidal sinus","type":"exact"},{"name":"ethmoid sinus epidermoid carcinoma","type":"exact"},{"name":"ethmoid sinus squamous cell carcinoma","type":"exact"},{"name":"ethmoidal sinus epidermoid carcinoma","type":"exact"},{"name":"ethmoidal sinus squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of ethmoid sinus","type":"exact"},{"name":"squamous cell carcinoma of ethmoidal sinus","type":"exact"},{"name":"squamous cell carcinoma of the ethmoid sinus","type":"exact"},{"name":"squamous cell carcinoma of the ethmoidal sinus","type":"exact"}],"termid":"MONDO:0002416","xrefs":{"Monarch":{"xref_id":"0002416"}}}


id: PBO:0001231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute binding protein 1","termid":"PBO:0001231"}


id: FYPO:0005263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-arginine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular arginine level","synonyms":[{"name":"increased arginine accumulation","type":"related"},{"name":"increased cellular L-arginine level","type":"exact"},{"name":"increased cellular arginine level during mitotic cell cycle","type":"related"},{"name":"increased cellular arginine level during vegetative growth","type":"exact"}],"termid":"FYPO:0005263"}


id: GO:0023030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class Ib molecules via the antigen binding groove.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class Ib protein binding","termid":"GO:0023029"},{"relation_name":"part_of","term_name":"MHC class Ib protein complex binding","termid":"GO:0023025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class Ib protein binding, via antigen binding groove","termid":"GO:0023030"}


id: MONDO:0014913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0014913 (obsolete MONDO:0014913)","termid":"MONDO:0014913","xrefs":{"Monarch":{"xref_id":"0014913"}}}


id: PBO:0074134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 34 member 2","termid":"PBO:0074134"}


id: GO:0061847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cholecystokinin stimulus.","definition_xrefs":["PMID:14622258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cholecystokinin","termid":"GO:0061847"}


id: PBO:0113058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of mitochondrial small ribosomal subunit; similar to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency; localizes to vacuole in response to H2O2; localizes to peroxisomes in glucose-growing cells","termid":"PBO:0113058"}


id: GO:0042769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events required to receive a stimulus indicating DNA damage has occurred and convert it to a molecular signal.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA damage response, detection of DNA damage (obsolete GO:0042769)","synonyms":[{"name":"DNA damage response, perception of DNA damage","type":"related"},{"name":"detection of DNA damage during DNA damage response","type":"exact"}],"termid":"GO:0042769"}


id: PBO:0043630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit beta 2","termid":"PBO:0043630"}


id: PBO:0056208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B3","termid":"PBO:0056208"}


id: FYPO:0000015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a daughter cell begins to grow from the lateral portion of the long axis of the cell, and at an angle to the septum or cell division site of the mother cell, resulting in the formation of a single cell that has a branch.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"branched vegetative cell","synonyms":[{"name":"branched cell","type":"exact"},{"name":"branched cell during vegetative growth","type":"exact"},{"name":"branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, branched","type":"exact"}],"termid":"FYPO:0000015"}


id: GO:0070636
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90171],"is_not":false,"summary":null,"term":"GO:0070636"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinic acid riboside + H2O = nicotinic acid + D-ribose.","definition_xrefs":["GOC:mah","PMID:19001417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nicotinic acid riboside hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-ribosylnicotinate hydrolase activity","type":"exact"},{"name":"D-ribosylnicotinic acid hydrolase activity","type":"exact"},{"name":"nicotinate ribonucleoside hydrolase activity","type":"exact"},{"name":"nicotinate riboside hydrolase activity","type":"exact"},{"name":"nicotinic acid ribonucleoside hydrolase activity","type":"exact"}],"termid":"GO:0070636","terms_by_termid":{"GO:0070636":null}}


id: GO:0019367
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89018,91450],"is_not":false,"summary":null,"term":"GO:0019367"}]},"cv_name":"biological_process","definition":"Elongation of a saturated fatty acid chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid elongation","termid":"GO:0030497"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid elongation, saturated fatty acid","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:FASYN-ELONG-PWY"],"termid":"GO:0019367","terms_by_termid":{"GO:0019367":null}}


id: GO:1901230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:1901230)","synonyms":[{"name":"down regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"down regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"down-regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"down-regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"downregulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"downregulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"inhibition of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"narrow"},{"name":"inhibition of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"narrow"},{"name":"negative regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"negative regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"negative regulation of non-canonical Wnt-activated signaling pathway via JNK cascade","type":"related"}],"termid":"GO:1901230"}


id: PBO:0027186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cytoskeleton_during_vegetative_growth","termid":"PBO:0027186"}


id: MONDO:1010081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune thrombocytopenic purpura that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia, non-human animal","termid":"MONDO:1010069"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thrombocytopenic purpura, non-human animal","secondary_identifiers":["OMIA:001104"],"termid":"MONDO:1010081","xrefs":{"Monarch":{"xref_id":"1010081"}}}


id: GO:0085001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a stylet, a hollow protrusible spear-like symbiont structure projected into the host cell for the purpose of obtaining nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of stylet for nutrient acquisition","synonyms":[{"name":"formation by symbiont of stylet for nutrient acquisition from host","type":"related"}],"termid":"GO:0085001"}


id: PBO:0040395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E1 pseudogene 3","termid":"PBO:0040395"}


id: GO:0033453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GCU codon-amino acid adaptor activity","synonyms":[{"name":"GCT codon-amino acid adaptor activity","type":"exact"},{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033453"}


id: GO:0014028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the notochord from the chordamesoderm. The notochord is composed of large cells packed within a firm connective tissue sheath and is found in all chordates at the ventral surface of the neural tube. In vertebrates, the notochord contributes to the vertebral column.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"},{"relation_name":"part_of","term_name":"notochord morphogenesis","termid":"GO:0048570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord formation","termid":"GO:0014028"}


id: PBO:0066515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of cell cycle","termid":"PBO:0066515"}


id: MONDO:0043683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An atherosclerotic disorder of the peripheral vascular system affecting mostly males in their later decades. It is caused by thrombotic occlusion of the abdominal aorta just above the level of the bifurcation. Clinical signs include impotence, intermittent claudication, diminished femoral pulses and cold, pallid lower extremities. Prognosis is favorable with surgical or endovascular intervention.","definition_xrefs":["NCIT:C34773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leriche syndrome","secondary_identifiers":["UMLS:C0023370","MESH:D007925","SCTID:307816004","MEDGEN:44114"],"synonyms":[{"name":"Leriche syndrome","type":"exact"},{"name":"Leriche's syndrome","type":"related"},{"name":"Leriches syndrome","type":"related"},{"name":"leriche's syndrome","type":"exact"},{"name":"syndrome, Leriche","type":"related"},{"name":"syndrome, Leriche's","type":"related"}],"termid":"MONDO:0043683","xrefs":{"Monarch":{"xref_id":"0043683"}}}


id: PBO:0017673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein New2","termid":"PBO:0017673"}


id: PBO:0062903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXR1 antisense RNA 1","termid":"PBO:0062903"}


id: PBO:0061211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 4","termid":"PBO:0061211"}


id: PBO:0034767
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ARPC1A","termid":"PBO:0034767"}


id: GO:0018984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving naphthalenesulfonate, sulfonated derivatives of naphthalene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"naphthalenesulfonate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:nphs","GO:0018932"],"synonyms":[{"name":"naphthalenesulfonate metabolism","type":"exact"},{"name":"naphthalenesulphonate metabolic process","type":"exact"},{"name":"naphthalenesulphonate metabolism","type":"exact"}],"termid":"GO:0018984"}


id: GO:0018322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a tyrosine molecule to a protein amino acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein tyrosinylation (obsolete GO:0018322)","synonyms":[{"name":"protein amino acid tyrosinylation","type":"exact"}],"termid":"GO:0018322"}


id: PBO:0059033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 23A (pseudogene)","termid":"PBO:0059033"}


id: PBO:0069614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 891, pseudogene","termid":"PBO:0069614"}


id: GO:0005839
data:
  {"annotated_genes":["SJAG_02562","SJAG_04969","SJAG_04541","SJAG_02502","SJAG_00808","SJAG_01014","SJAG_05316","SJAG_00128","SJAG_00778","SJAG_04888","SJAG_04229","SJAG_03151","SJAG_04306","SJAG_04357"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110847,99252,95964,101376,114085,88028,115015],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019773"},{"annotations":[93500,110605,110168,92853,95733,97204,117275],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019774"}]},"cv_name":"cellular_component","definition":"A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.","definition_xrefs":["PMID:10806206","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"proteasome complex","termid":"GO:0000502"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00128":null,"SJAG_00778":null,"SJAG_00808":null,"SJAG_01014":null,"SJAG_02502":null,"SJAG_02562":null,"SJAG_03151":null,"SJAG_04229":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_04541":null,"SJAG_04888":null,"SJAG_04969":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome core complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000503"],"synonyms":[{"name":"20S core complex","type":"narrow"},{"name":"20S proteasome","type":"narrow"},{"name":"PA28gamma-20S proteasome","type":"narrow"},{"name":"macropain","type":"exact"}],"termid":"GO:0005839","terms_by_termid":{"GO:0019773":null,"GO:0019774":null}}


id: GO:0009025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tagatose 1,6-diphosphate = D-glyceraldehyde 3-phosphate + glycerone phosphate.","definition_xrefs":["RHEA:22948","EC:4.1.2.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"tagatose-bisphosphate aldolase activity","secondary_identifiers":["KEGG_REACTION:R01069","MetaCyc:TAGAALDOL-RXN"],"synonyms":[{"name":"AgaY","type":"related"},{"name":"AgaZ","type":"related"},{"name":"D-tagatose-1,6-bisphosphate D-glyceraldehyde 3-phosphate-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"D-tagatose-1,6-bisphosphate aldolase activity","type":"related"},{"name":"D-tagatose-1,6-bisphosphate triosephosphate lyase activity","type":"exact"},{"name":"KbaY","type":"related"},{"name":"tagatose 1,6-diphosphate aldolase activity","type":"related"},{"name":"tagatose-1,6-bisphosphate aldolase 1","type":"exact"}],"termid":"GO:0009025"}


id: PBO:0056807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 4A","termid":"PBO:0056807"}


id: MONDO:0019237
data:
  {"annotated_genes":["SJAG_05230","SJAG_01881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[85027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of pyridoxine metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"inborn disorder of biogenic amine metabolism and transport","termid":"MONDO:0019250"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01881":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of pyridoxine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1860570911","MEDGEN:1842882","GARD:18966","Orphanet:79192","UMLS:C5681285"],"synonyms":[{"name":"disorder of pyridoxine metabolism","type":"related"},{"name":"inborn error of pyridoxine metabolic process","type":"exact"},{"name":"inborn pyridoxine metabolic process disorder","type":"exact"},{"name":"rare inborn error of pyridoxine metabolic process","type":"exact"}],"termid":"MONDO:0019237","terms_by_termid":{"MONDO:0012407":null,"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0019237"}}}


id: GO:0030054
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella.","definition_xrefs":["GOC:bc","PMID:26820516","GOC:aruk","PMID:28096264","ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell junction","secondary_identifiers":["Wikipedia:Cell_junction"],"termid":"GO:0030054"}


id: MONDO:0009035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of craniometaphyseal dysplasia.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"craniometaphyseal dysplasia","termid":"MONDO:0015465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"craniometaphyseal dysplasia, autosomal recessive","secondary_identifiers":["UMLS:C2931244","MEDGEN:419753","GARD:1582","MESH:C536570","DOID:0080802","OMIM:218400"],"synonyms":[{"name":"CMDR","type":"related"},{"name":"autosomal recessive craniometaphyseal dysplasia","type":"exact"},{"name":"craniometaphyseal dysplasia, autosomal recessive","type":"exact"},{"name":"craniometaphyseal dysplasia, autosomal recessive type","type":"related"}],"termid":"MONDO:0009035","xrefs":{"Monarch":{"xref_id":"0009035"}}}


id: PBO:0028937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_5-fluoroorotic_acid","termid":"PBO:0028937"}


id: MOD:01156
data:
  {"annotated_genes":["SJAG_00331","SJAG_01626","SJAG_01162","SJAG_02472","SJAG_04238","SJAG_01671","SJAG_02694","SJAG_04125","SJAG_02183","SJAG_01587","SJAG_04789","SJAG_04953","SJAG_02260","SJAG_03009","SJAG_00096","SJAG_02388","SJAG_04553","SJAG_02498","SJAG_00733","SJAG_01488","SJAG_03032","SJAG_03641","SJAG_03012","SJAG_04067","SJAG_01970","SJAG_02766","SJAG_02592","SJAG_04551","SJAG_02522","SJAG_02763","SJAG_02827","SJAG_04972","SJAG_00109","SJAG_02489","SJAG_00784","SJAG_00318","SJAG_00464","SJAG_02504","SJAG_02435","SJAG_00288","SJAG_01029","SJAG_04819","SJAG_00254","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00226"},{"annotations":[80071,80177,79994,79973,80106,80014,80108,79971,80123,79992,79993,80073,80089,80261,80138,80131,80128,79981,80213,80122,80255,80119,80107,79987,79991,80092,80234,80124,80125,80047,80093,80217,80232,80233,80088,80104,79974,80090,80010,80072,80137,80094,80260,79975,80178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00689"},{"annotations":[80208,80064,80202,80209,80059,80207,80060,80199,80063,80062,80201,80061,80200,80206,80210,80211,80058,80203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00693"},{"annotations":[80278,79999,80227,80173,80280,80215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00042"},{"annotations":[80290,80001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"},{"annotations":[80165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00126"},{"annotations":[80164,80009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00123"},{"annotations":[80011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00127"},{"annotations":[80042,118662,80043,119028,119026,119027,119025,118661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[79996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00159"},{"annotations":[118918,118828,118796,118830,118829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00696"}]},"cv_name":"PSI-MOD","definition":"Modified amino acid residue derived from a natural amino acid by a real or hypothetical chemical process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification","termid":"MOD:00000"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00288":null,"SJAG_00318":null,"SJAG_00331":null,"SJAG_00464":null,"SJAG_00733":null,"SJAG_00784":null,"SJAG_01029":null,"SJAG_01162":null,"SJAG_01488":null,"SJAG_01587":null,"SJAG_01626":null,"SJAG_01671":null,"SJAG_01970":null,"SJAG_02183":null,"SJAG_02260":null,"SJAG_02388":null,"SJAG_02435":null,"SJAG_02472":null,"SJAG_02489":null,"SJAG_02498":null,"SJAG_02504":null,"SJAG_02522":null,"SJAG_02592":null,"SJAG_02694":null,"SJAG_02763":null,"SJAG_02766":null,"SJAG_02827":null,"SJAG_03009":null,"SJAG_03012":null,"SJAG_03032":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_04067":null,"SJAG_04125":null,"SJAG_04238":null,"SJAG_04551":null,"SJAG_04553":null,"SJAG_04789":null,"SJAG_04819":null,"SJAG_04953":null,"SJAG_04972":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification categorized by chemical process","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:36408920":null},"termid":"MOD:01156","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0036460":null,"GO:0042149":null,"GO:0071475":null,"GO:0120306":null,"GO:1904547":null,"MOD:00042":null,"MOD:00046":null,"MOD:00050":null,"MOD:00123":null,"MOD:00126":null,"MOD:00127":null,"MOD:00159":null,"MOD:00226":null,"MOD:00689":null,"MOD:00693":null,"MOD:00696":null}}


id: PR:O42881
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acyl-protein thioesterase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-protein thioesterase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.04c","secondary_identifiers":["UniProtKB:O42881"],"synonyms":[{"name":"Spom972h-LYPLA2","type":"exact"}],"termid":"PR:O42881"}


id: PBO:0062480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily L member 1 pseudogene","termid":"PBO:0062480"}


id: GO:0004156
data:
  {"annotated_genes":["SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104416],"is_not":false,"summary":null,"term":"GO:0004156"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + 4-aminobenzoate = diphosphate + dihydropteroate.","definition_xrefs":["EC:2.5.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydropteroate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:19949","MetaCyc:H2PTEROATESYNTH-RXN"],"synonyms":[{"name":"(2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl-diphosphate:4-aminobenzoate 2-amino-4-hydroxydihydropteridine-6-methenyltransferase activity","type":"related"},{"name":"2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine-diphosphate:4-aminobenzoate 2-amino-4-hydroxydihydropteridine-6-methenyltransferase activity","type":"related"},{"name":"7,8-dihydropteroate synthase activity","type":"related"},{"name":"7,8-dihydropteroate synthetase activity","type":"related"},{"name":"7,8-dihydropteroic acid synthetase activity","type":"related"},{"name":"DHPS activity","type":"related"},{"name":"dihydropteroate diphosphorylase activity","type":"related"},{"name":"dihydropteroate pyrophosphorylase activity","type":"related"},{"name":"dihydropteroate synthetase activity","type":"related"},{"name":"dihydropteroic synthetase activity","type":"related"}],"termid":"GO:0004156","terms_by_termid":{"GO:0004156":null}}


id: GO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between RNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-5'-RNA)-L-tyrosine.","definition_xrefs":["RESID:AA0249"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA-protein covalent cross-linking via peptidyl-tyrosine (obsolete GO:0018148)","termid":"GO:0018148"}


id: PBO:0046922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 41 member A, Y-linked 1","termid":"PBO:0046922"}


id: MONDO:0016702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)","definition_xrefs":["NCIT:C4050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed glioma","termid":"MONDO:0003268"},{"relation_name":"is_a","term_name":"grade II glioma","termid":"MONDO:0021639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligoastrocytoma","secondary_identifiers":["UMLS:C0547065","DOID:7912","GARD:9769","MESH:D009837","ONCOTREE:OAST","Orphanet:251656","SCTID:716647001","MEDGEN:154285","MedDRA:10027744","EFO:0000630"],"synonyms":[{"name":"MOA","type":"exact"},{"name":"WHO grade II mixed glioma","type":"exact"},{"name":"glioma, mixed, benign","type":"exact"},{"name":"mixed astrocytic-oligodendroglial neoplasm","type":"exact"},{"name":"mixed astrocytic-oligodendroglial tumor","type":"exact"},{"name":"mixed astrocytic-oligodendroglial tumour","type":"exact"},{"name":"mixed astrocytoma-oligodendroglioma","type":"exact"},{"name":"mixed oligo-astrocytoma","type":"exact"},{"name":"mixed oligoastrocytoma","type":"exact"},{"name":"mixed oligodendroglioma-astrocytoma","type":"exact"},{"name":"oligoastrocytoma","type":"exact"}],"termid":"MONDO:0016702","xrefs":{"Monarch":{"xref_id":"0016702"}}}


id: PBO:0051850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRX4 antisense RNA 1","termid":"PBO:0051850"}


id: PBO:0090226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S2","termid":"PBO:0090226"}


id: SO:0000441
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligonucleotide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ss_oligo","synonyms":[{"name":"single strand oligo","type":"exact"},{"name":"single strand oligonucleotide","type":"exact"},{"name":"single stranded oligonucleotide","type":"exact"},{"name":"ss oligo","type":"exact"},{"name":"ss oligonucleotide","type":"exact"}],"termid":"SO:0000441"}


id: GO:1901212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac chamber formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"is_a","term_name":"positive regulation of cardiac chamber morphogenesis","termid":"GO:1901221"},{"relation_name":"positively_regulates","term_name":"cardiac chamber formation","termid":"GO:0003207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac chamber formation","synonyms":[{"name":"activation of cardiac chamber formation","type":"narrow"},{"name":"activation of heart chamber formation","type":"exact"},{"name":"positive regulation of heart chamber formation","type":"exact"},{"name":"up regulation of cardiac chamber formation","type":"exact"},{"name":"up regulation of heart chamber formation","type":"exact"},{"name":"up-regulation of cardiac chamber formation","type":"exact"},{"name":"up-regulation of heart chamber formation","type":"exact"},{"name":"upregulation of cardiac chamber formation","type":"exact"},{"name":"upregulation of heart chamber formation","type":"exact"}],"termid":"GO:1901212"}


id: MONDO:0007681
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86239],"is_not":false,"summary":null,"term":"MONDO:0007681"}]},"cv_name":"mondo","definition":"Any multinodular goiter in which the cause of the disease is a mutation in the DICER1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinodular goiter","termid":"MONDO:0000334"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"DICER1-related tumor predisposition","termid":"MONDO:0100216"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"is_obsolete":false,"name":"goiter, multinodular 1, with or without Sertoli-Leydig cell tumors","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:86230","GARD:17278","Orphanet:276399","MESH:C562732","UMLS:C0302859","ICD9:240.0","OMIM:138800","SCTID:267369002"],"synonyms":[{"name":"FMNG","type":"exact"},{"name":"MNG1","type":"exact"},{"name":"euthyroid goiter","type":"broad"},{"name":"euthyroid goitre","type":"broad"},{"name":"familial MNG","type":"exact"},{"name":"goiter, multinodular 1, with or without Sertoli-Leydig cell tumors","type":"exact"},{"name":"goiter, nontoxic, with Intrathyroidal calcification","type":"exact"},{"name":"multinodular goiter, adolescent","type":"exact"},{"name":"simple goiter","type":"broad"},{"name":"simple goitre","type":"broad"}],"termid":"MONDO:0007681","terms_by_termid":{"MONDO:0007681":null},"xrefs":{"Monarch":{"xref_id":"0007681"}}}


id: MONDO:0007463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal osteosclerosis","secondary_identifiers":["UMLS:C1852063","OMIM:126250","MESH:C565093","MEDGEN:338863"],"synonyms":[{"name":"distal osteosclerosis","type":"exact"},{"name":"osteosclerosis, distal","type":"related"}],"termid":"MONDO:0007463","xrefs":{"Monarch":{"xref_id":"0007463"}}}


id: PBO:0079669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2","termid":"PBO:0079669"}


id: SO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a glutamine anticodon, and a 3' glutamine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"glutamic_acid_tRNA_primary_transcript","termid":"SO:0000216"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminyl_tRNA","synonyms":[{"name":"glutaminyl tRNA","type":"exact"},{"name":"glutaminyl-transfer RNA","type":"exact"},{"name":"glutaminyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000259"}


id: FYPO:0007677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in cellular membranes is abnormal.","definition_xrefs":["PMID:32320462","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane lipid distribution","termid":"FYPO:0006545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal sterol distribution","termid":"FYPO:0007677"}


id: GO:0033416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UGG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"UGG codon-amino acid adaptor activity","synonyms":[{"name":"TGG codon-amino acid adaptor activity","type":"exact"},{"name":"tryptophan tRNA","type":"related"}],"termid":"GO:0033416"}


id: PBO:0054893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2307","termid":"PBO:0054893"}


id: GO:0031783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5 melanocortin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 5 melanocortin receptor binding","synonyms":[{"name":"type 5 melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0031783"}


id: PBO:0045306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 1","termid":"PBO:0045306"}


id: PBO:0065627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 5","termid":"PBO:0065627"}


id: PBO:0005494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jmjc domain chromatin associated protein Epe1","termid":"PBO:0005494"}


id: PBO:0088710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2457 family conserved fungal protein","termid":"PBO:0088710"}


id: PBO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.11.-","termid":"PBO:0001176"}


id: PR:O74825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21297:SF0","PRO:DNx","OMA:SCHPO02695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.14","secondary_identifiers":["UniProtKB:O74825"],"synonyms":[{"name":"RNA polymerase II subunit B4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2D","type":"exact"}],"termid":"PR:O74825"}


id: PBO:0052888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-11, pseudogene","termid":"PBO:0052888"}


id: GO:0045983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving purine bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleobase metabolic process","termid":"GO:0006141"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of purine nucleobase metabolic process","synonyms":[{"name":"activation of purine base metabolic process","type":"narrow"},{"name":"positive regulation of purine base metabolic process","type":"exact"},{"name":"positive regulation of purine base metabolism","type":"exact"},{"name":"stimulation of purine base metabolic process","type":"narrow"},{"name":"up regulation of purine base metabolic process","type":"exact"},{"name":"up-regulation of purine base metabolic process","type":"exact"},{"name":"upregulation of purine base metabolic process","type":"exact"}],"termid":"GO:0045983"}


id: SO:1001277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The recoding stimulatory signal located downstream of the recoding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_recoding_site","synonyms":[{"name":"three prime recoding site","type":"exact"}],"termid":"SO:1001277"}


id: RO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"precedes","termid":"BFO:0000063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_precedes","termid":"RO:0002090"}


id: PBO:0080648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat, sterile alpha motif and U-box domain containing 1","termid":"PBO:0080648"}


id: PBO:0070445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 2","termid":"PBO:0070445"}


id: GO:0038074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate, where the MAP kinase (MAPK) is part of a MAPK signaling cascade that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase phosphatase activity involved in regulation of conjugation with cellular fusion (obsolete GO:0038074)","synonyms":[{"name":"MAPK phosphatase activity involved in regulation of conjugation with cellular fusion","type":"exact"}],"termid":"GO:0038074"}


id: GO:1904020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G protein-coupled receptor internalization.","definition_xrefs":["GOC:TermGenie","PMID:24732013","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled receptor internalization","termid":"GO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of G protein-coupled receptor internalization","synonyms":[{"name":"regulation of G-protein-coupled receptor internalization","type":"exact"}],"termid":"GO:1904020"}


id: GO:0032408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MutSbeta mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex binding","termid":"GO:0032404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MutSbeta complex binding","termid":"GO:0032408"}


id: GO:0015804
data:
  {"annotated_genes":["SJAG_05346","SJAG_02029","SJAG_03591","SJAG_04588","SJAG_03256","SJAG_00626","SJAG_04984","SJAG_04725","SJAG_00991","SJAG_03970","SJAG_03400","SJAG_04295"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113133,63197,118442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[63056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006868"},{"annotations":[97729,99731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[66044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015816"},{"annotations":[109485,102288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"},{"annotations":[103323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[65006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015825"},{"annotations":[87605],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[91251,92834,98381],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[90131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"}]},"cv_name":"biological_process","definition":"The directed movement of neutral amino acids, amino acids with no net charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00626":null,"SJAG_00991":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04725":null,"SJAG_04984":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"neutral amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015804","terms_by_termid":{"GO:0006868":null,"GO:0015816":null,"GO:0015825":null,"GO:0090516":null,"GO:0140300":null,"GO:1903712":null,"GO:1903714":null,"GO:1904983":null,"GO:1905533":null,"GO:1905534":null}}


id: GO:1900130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lipid binding.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipid binding (obsolete GO:1900130)","termid":"GO:1900130"}


id: PBO:0079632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 2","termid":"PBO:0079632"}


id: PBO:0110465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 5","termid":"PBO:0110465"}


id: PBO:0067318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 404, pseudogene","termid":"PBO:0067318"}


id: GO:0047134
data:
  {"annotated_genes":["SJAG_00489","SJAG_04399","SJAG_03653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106263],"is_not":false,"summary":null,"term":"GO:0047134"},{"annotations":[109549,79005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein-dithiol + NAD(P)+ = protein-disulfide + NAD(P)H + H+.","definition_xrefs":["EC:1.8.1.8","MetaCyc:1.6.4.4-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-disulfide reductase activity","termid":"GO:0015035"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00489":null,"SJAG_03653":null,"SJAG_04399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0015036","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein-disulfide reductase (NAD(P)H) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD(P)H:protein-disulfide oxidoreductase activity","type":"related"},{"name":"disulfide reductase activity","type":"related"},{"name":"insulin-glutathione transhydrogenase activity","type":"related"},{"name":"protein disulfide reductase (NAD(P)H) activity","type":"exact"},{"name":"protein disulfide reductase activity","type":"related"},{"name":"protein disulphide reductase activity","type":"related"},{"name":"protein-disulfide reductase (NAD(P)) activity","type":"exact"},{"name":"protein-disulfide reductase activity","type":"broad"},{"name":"protein-disulphide reductase activity","type":"broad"}],"termid":"GO:0047134","terms_by_termid":{"GO:0004791":null,"GO:0047134":null}}


