# terms

id: PR:O94646
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.04","synonyms":[{"name":"Spom972h-med8","type":"exact"},{"name":"cell separation protein sep15 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator complex subunit 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94646"}


id: GO:0051625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of epinephrine into a cell, typically presynaptic neurons or glial cells. Epinephrine is a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"epinephrine uptake","synonyms":[{"name":"adrenaline reuptake","type":"exact"},{"name":"adrenaline uptake","type":"exact"},{"name":"epinephrine import","type":"exact"},{"name":"epinephrine reuptake","type":"exact"}],"termid":"GO:0051625"}


id: PBO:0075636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2F","termid":"PBO:0075636"}


id: FYPO:0000706
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific molecular function is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal molecular function","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"termid":"FYPO:0000706","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: GO:0106378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-dATP + H2O = 2-hydroxy-dAMP + H+ + diphosphate.","definition_xrefs":["RHEA:31583","PMID:11139615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0047429"],"is_obsolete":false,"name":"2-hydroxy-dATP hydrolase activity","secondary_identifiers":["Reactome:R-HSA-2395818"],"termid":"GO:0106378"}


id: PBO:0089963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator Ncb2","termid":"PBO:0089963"}


id: MONDO:0035791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with rectal stenosis (obsolete MONDO:0035791)","secondary_identifiers":["Orphanet:601023"],"termid":"MONDO:0035791","xrefs":{"Monarch":{"xref_id":"0035791"}}}


id: SO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence ACGCGT, bound by the transcription factor complex MBF (MCB-binding factor) and found in promoters of genes expressed during the G1/S transition of the cell cycle.","definition_xrefs":["PMID:16285853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCB","synonyms":[{"name":"MluI cell cycle box","type":"exact"}],"termid":"SO:0001855"}


id: GO:0140740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginyl-[protein] + NAD+ = ADP-riboxanated L-argininyl-[protein] + H+ + NH4(+) + nicotinamide.","definition_xrefs":["RHEA:69500","PMID:34671164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"},{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140096","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"ADP-riboxanase activity","termid":"GO:0140740"}


id: MONDO:0022733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choreoacanthocytosis amyotrophic","termid":"MONDO:0022733","xrefs":{"Monarch":{"xref_id":"0022733"}}}


id: PBO:0073907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 15 member 5","termid":"PBO:0073907"}


id: FYPO:0002465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in a population of spores are viable, and all have an abnormal shape. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable spore population with abnormal spore shape (obsolete FYPO:0002465)","synonyms":[{"name":"inviable population of spores with abnormal shape","type":"exact"},{"name":"inviable spore population with abnormal shape","type":"exact"}],"termid":"FYPO:0002465"}


id: PBO:0045277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 28","termid":"PBO:0045277"}


id: PBO:0063694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein geranylgeranyltransferase type I subunit beta pseudogene 1","termid":"PBO:0063694"}


id: MONDO:0017858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia characterized by a predominant immature erythroid population. There are two subtypes recognized: erythroleukemia and pure erythroid leukemia. (WHO, 2001)","definition_xrefs":["NCIT:C8923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"},{"relation_name":"is_a","term_name":"erythroid neoplasm","termid":"MONDO:0020703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute erythroid leukemia","secondary_identifiers":["GARD:9620","EFO:0000218","icd11.foundation:631263622","ICD9:205.80","SCTID:93451002","UMLS:C0023440","MEDGEN:7316","ICDO:9840/3","ICD9:207.00","icd11.foundation:538743484","MESH:D004915","Orphanet:318","DOID:0080780","NANDO:2200010"],"synonyms":[{"name":"acute erythroblastic leukemia","type":"exact"},{"name":"acute erythroid leukemia","type":"exact"},{"name":"acute erythroleukemia","type":"related"},{"name":"acute erythroleukemia M6a subtype","type":"related"},{"name":"acute erythroleukemia M6b subtype","type":"related"},{"name":"acute myeloid leukaemia FAB-M6","type":"related"},{"name":"acute myeloid leukaemia M6","type":"exact"},{"name":"acute myeloid leukemia FAB-M6","type":"related"},{"name":"acute myeloid leukemia M6","type":"exact"},{"name":"erythroblastic leukaemia","type":"exact"},{"name":"erythroblastic leukemia","type":"exact"},{"name":"AEL","type":"exact"},{"name":"AML M6","type":"exact"},{"name":"AML-M6","type":"related"},{"name":"Di Guglielmo syndrome","type":"related"},{"name":"Di Guglielmo's syndrome","type":"related"},{"name":"Erythroleukemia","type":"related"},{"name":"FAB M6","type":"exact"},{"name":"M6 acute myeloid leukaemia","type":"exact"},{"name":"M6 acute myeloid leukemia","type":"exact"},{"name":"acute erythroblastic leukaemia","type":"exact"},{"name":"leukemia, erythroid, malignant","type":"exact"}],"termid":"MONDO:0017858","xrefs":{"Monarch":{"xref_id":"0017858"}}}


id: MONDO:0008437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the ATL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 3A","secondary_identifiers":["OMIM:182600","NCIT:C142893","UMLS:C2931355","GARD:5041","Orphanet:100984","MESH:C536864","DOID:0110791","MEDGEN:419393"],"synonyms":[{"name":"ATL1 hereditary spastic paraplegia","type":"exact"},{"name":"FSP1","type":"exact"},{"name":"SPG3A","type":"exact"},{"name":"Spg3","type":"related"},{"name":"Strumpell disease","type":"related"},{"name":"Strümpell disease","type":"exact"},{"name":"autosomal dominant familial spastic paraplegia 1","type":"exact"},{"name":"autosomal dominant spastic paraplegia 3","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 3","type":"exact"},{"name":"familial spastic paraplegia, autosomal dominant, 1","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in ATL1","type":"exact"},{"name":"hereditary spastic paraplegia type 3A","type":"exact"},{"name":"spastic Paraplegia 3A","type":"exact"},{"name":"spastic paraplegia 3","type":"related"},{"name":"spastic paraplegia 3, autosomal dominant","type":"related"},{"name":"spastic paraplegia 3a, autosomal dominant","type":"exact"},{"name":"strumpell disease","type":"exact"}],"termid":"MONDO:0008437","xrefs":{"Monarch":{"xref_id":"0008437"}}}


id: GO:0005049
data:
  {"annotated_genes":["SJAG_03693","SJAG_01358","SJAG_02661","SJAG_01534","SJAG_04366"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90596,96011,107933,112976,116705],"is_not":false,"summary":null,"term":"GO:0005049"}]},"cv_name":"molecular_function","definition":"Combining with a nuclear export signal (NES) on a cargo to be transported, to mediate transport of a the cargo through the nuclear pore, from the nuclear lumen to the cytoplasm. The cargo can be either a RNA or a protein.","definition_xrefs":["PMID:28713609","GOC:bf","GOC:pg","PMID:11743003","GOC:mah","Wikipedia:Nuclear_transport","GOC:vw","PMID:25802992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic carrier activity","termid":"GO:0140142"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01358":null,"SJAG_01534":null,"SJAG_02661":null,"SJAG_03693":null,"SJAG_04366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140142"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140142","GO:0140104"],"is_obsolete":false,"name":"nuclear export signal receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008262","Reactome:R-HSA-178215"],"synonyms":[{"name":"NES receptor","type":"exact"},{"name":"exportin activity","type":"related"},{"name":"importin-alpha binding","type":"related"},{"name":"importin-alpha export receptor activity","type":"narrow"}],"termid":"GO:0005049","terms_by_termid":{"GO:0005049":null}}


id: PBO:0003934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol dehydrogenase His2 (predicted)","termid":"PBO:0003934"}


id: PR:000027520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase spindle elongation protein 1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:19686686","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphase spindle elongation protein 1","termid":"PR:000027517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ase1/UnMod","pombase_gene_id":"SPAPB1A10.09","synonyms":[{"name":"PomBase_original_PRO_term_name: anaphase spindle elongation protein 1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ase1/UnMod","type":"exact"},{"name":"ase1/UnMod","type":"exact"}],"termid":"PR:000027520"}


id: PBO:0068132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 439","termid":"PBO:0068132"}


id: PBO:0054588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1991","termid":"PBO:0054588"}


id: PBO:0000509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase Pis1 (predicted)","termid":"PBO:0000509"}


id: PBO:0052398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRT19 interacting long noncoding RNA in hepatocellular carcinoma","termid":"PBO:0052398"}


id: MONDO:0958239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia/coloboma 11","secondary_identifiers":["OMIM:620731"],"termid":"MONDO:0958239","xrefs":{"Monarch":{"xref_id":"0958239"}}}


id: PBO:0086966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit A of the heterotrimeric PP2A complex; the heterotrimeric protein phosphatase 2A (PP2A) complex also contains regulatory subunit Cdc55p and either catalytic subunit Pph21p or Pph22p; required for cell morphogenesis and transcription by RNA polymerase III","termid":"PBO:0086966"}


id: PBO:0058201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4494","termid":"PBO:0058201"}


id: PBO:0038764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 pseudogene 1","termid":"PBO:0038764"}


id: MONDO:0005390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cardiac arrhythmia (obsolete MONDO:0005390)","termid":"MONDO:0005390","xrefs":{"Monarch":{"xref_id":"0005390"}}}


id: PBO:0109937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, spliceosomal Prp22","termid":"PBO:0109937"}


id: GO:0032235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of calcium ions via a store-operated calcium channel.","definition_xrefs":["PMID:16582901","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium ion transport via store-operated calcium channel activity (obsolete GO:0032235)","synonyms":[{"name":"down regulation of calcium ion transport via store-operated calcium channel","type":"exact"},{"name":"down-regulation of calcium ion transport via store-operated calcium channel","type":"exact"},{"name":"downregulation of calcium ion transport via store-operated calcium channel","type":"exact"},{"name":"inhibition of calcium ion transport via store-operated calcium channel","type":"narrow"},{"name":"negative regulation of calcium ion transport via store-operated calcium channel activity","type":"exact"},{"name":"negative regulation of calcium transport via store-operated calcium channel","type":"exact"},{"name":"negative regulation of store-operated calcium channel activity","type":"exact"}],"termid":"GO:0032235"}


id: FYPO:0001219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during a cellular response to nitrogen starvation is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level during cellular response to nitrogen starvation","synonyms":[{"name":"increased protein accumulation during cellular response to nitrogen starvation","type":"related"},{"name":"increased protein level during cellular response to nitrogen depletion","type":"exact"},{"name":"increased protein level during cellular response to nitrogen deprivation","type":"exact"},{"name":"increased protein level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001219"}


id: PBO:0060991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHERF family PDZ scaffold protein 2","termid":"PBO:0060991"}


id: PR:O59855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssa2 gene.","definition_xrefs":["UniProtKB:O59855","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein ssa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.13","synonyms":[{"name":"Spom972h-ssa2","type":"exact"}],"termid":"PR:O59855"}


id: GO:0044834
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetramer of retroviral integrase subunits tightly associated with a pair of viral DNA ends. Functions to insert viral DNA into a host cell chromosome.","definition_xrefs":["PMID:20118915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"retroviral intasome","termid":"GO:0044834"}


id: GO:0071334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rhamnose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to rhamnose","termid":"GO:0032149"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rhamnose stimulus","synonyms":[{"name":"cellular response to L-rhamnose stimulus","type":"narrow"}],"termid":"GO:0071334"}


id: MONDO:0045022
data:
  {"annotated_genes":["SJAG_02397","SJAG_00582","SJAG_03434","SJAG_02433","SJAG_01147","SJAG_03660","SJAG_03712","SJAG_03247","SJAG_02158","SJAG_04192","SJAG_01164","SJAG_00839","SJAG_03275","SJAG_02313","SJAG_03659","SJAG_01199","SJAG_00605","SJAG_02235","SJAG_01924","SJAG_03222","SJAG_04495","SJAG_01061","SJAG_03861","SJAG_02369","SJAG_02388","SJAG_04425","SJAG_04016","SJAG_02006","SJAG_03293","SJAG_03290","SJAG_03641","SJAG_03556","SJAG_00212","SJAG_02901","SJAG_01070","SJAG_02271","SJAG_00660","SJAG_03671","SJAG_01903","SJAG_03553","SJAG_03457","SJAG_04459","SJAG_04499","SJAG_02306","SJAG_03064","SJAG_00866","SJAG_01471","SJAG_02791","SJAG_04334","SJAG_03310","SJAG_03069","SJAG_04042","SJAG_00944","SJAG_01417","SJAG_04449","SJAG_03098","SJAG_02796","SJAG_01880","SJAG_00495","SJAG_02107","SJAG_01466","SJAG_00461","SJAG_03701","SJAG_00674","SJAG_00516","SJAG_02009","SJAG_02007","SJAG_04149","SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011614"},{"annotations":[85247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009603"},{"annotations":[85163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[86759,86760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[84547,84546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[86607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[84693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[86342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[86341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[86590,86591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011534"},{"annotations":[84855,84856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009352"},{"annotations":[85526,85527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[84568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009058"},{"annotations":[84980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[84589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"},{"annotations":[86541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[86203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013166"},{"annotations":[84539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958179"},{"annotations":[85929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958192"},{"annotations":[84685,84686,84687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013046"},{"annotations":[86762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010392"},{"annotations":[85372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009865"},{"annotations":[85209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[84951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100186"},{"annotations":[84989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012999"},{"annotations":[85713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86019,86020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"},{"annotations":[85808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[84799,84800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[86022,86021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[84976,84975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009388"},{"annotations":[86441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013404"},{"annotations":[86266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009400"},{"annotations":[86224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009401"},{"annotations":[85050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100058"},{"annotations":[86174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013762"},{"annotations":[84973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014576"},{"annotations":[84652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014057"},{"annotations":[86794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[84670,84671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[85501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009607"},{"annotations":[84777,84776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[85388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[86208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[85690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013877"},{"annotations":[84674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011582"},{"annotations":[85201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013675"},{"annotations":[85552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014132"},{"annotations":[84820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014611"},{"annotations":[84887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033282"},{"annotations":[85530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054785"},{"annotations":[85875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957382"},{"annotations":[85009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[86406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"},{"annotations":[85996,85995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[86589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"},{"annotations":[85941,85942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"},{"annotations":[86448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011152"},{"annotations":[86051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012596"},{"annotations":[85471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013531"},{"annotations":[85969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010717"},{"annotations":[85455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013580"},{"annotations":[86303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009502"},{"annotations":[84741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"},{"annotations":[86304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009503"},{"annotations":[85967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012120"},{"annotations":[85130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[86706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007067"},{"annotations":[85330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014803"},{"annotations":[84722,84721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010083"},{"annotations":[85322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"},{"annotations":[85133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of organic acid metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":69,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00461":null,"SJAG_00495":null,"SJAG_00516":null,"SJAG_00582":null,"SJAG_00605":null,"SJAG_00660":null,"SJAG_00674":null,"SJAG_00839":null,"SJAG_00866":null,"SJAG_00944":null,"SJAG_01061":null,"SJAG_01070":null,"SJAG_01147":null,"SJAG_01164":null,"SJAG_01199":null,"SJAG_01417":null,"SJAG_01466":null,"SJAG_01471":null,"SJAG_01880":null,"SJAG_01903":null,"SJAG_01924":null,"SJAG_02006":null,"SJAG_02007":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02158":null,"SJAG_02235":null,"SJAG_02271":null,"SJAG_02306":null,"SJAG_02313":null,"SJAG_02369":null,"SJAG_02388":null,"SJAG_02397":null,"SJAG_02433":null,"SJAG_02791":null,"SJAG_02796":null,"SJAG_02901":null,"SJAG_03064":null,"SJAG_03069":null,"SJAG_03098":null,"SJAG_03222":null,"SJAG_03247":null,"SJAG_03275":null,"SJAG_03290":null,"SJAG_03293":null,"SJAG_03310":null,"SJAG_03434":null,"SJAG_03457":null,"SJAG_03553":null,"SJAG_03556":null,"SJAG_03641":null,"SJAG_03659":null,"SJAG_03660":null,"SJAG_03671":null,"SJAG_03701":null,"SJAG_03712":null,"SJAG_03861":null,"SJAG_04016":null,"SJAG_04042":null,"SJAG_04149":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04425":null,"SJAG_04449":null,"SJAG_04459":null,"SJAG_04495":null,"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of organic acid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:468982","NANDO:2100161","UMLS:C1263739","ICD9:277.89","SCTID:116021002"],"synonyms":[{"name":"disorder of organic acid metabolic process","type":"exact"},{"name":"disorder of organic acid metabolism","type":"exact"},{"name":"organic acid metabolic process disease","type":"exact"},{"name":"organic acid metabolism disorder","type":"exact"}],"termid":"MONDO:0045022","terms_by_termid":{"MONDO:0007067":null,"MONDO:0007453":null,"MONDO:0007495":null,"MONDO:0009053":null,"MONDO:0009058":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009352":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009388":null,"MONDO:0009400":null,"MONDO:0009401":null,"MONDO:0009502":null,"MONDO:0009503":null,"MONDO:0009529":null,"MONDO:0009603":null,"MONDO:0009607":null,"MONDO:0009609":null,"MONDO:0009666":null,"MONDO:0009736":null,"MONDO:0009796":null,"MONDO:0009865":null,"MONDO:0009950":null,"MONDO:0010083":null,"MONDO:0010184":null,"MONDO:0010208":null,"MONDO:0010392":null,"MONDO:0010717":null,"MONDO:0011006":null,"MONDO:0011152":null,"MONDO:0011236":null,"MONDO:0011534":null,"MONDO:0011582":null,"MONDO:0011614":null,"MONDO:0012120":null,"MONDO:0012596":null,"MONDO:0012994":null,"MONDO:0012999":null,"MONDO:0013046":null,"MONDO:0013051":null,"MONDO:0013166":null,"MONDO:0013275":null,"MONDO:0013404":null,"MONDO:0013531":null,"MONDO:0013580":null,"MONDO:0013675":null,"MONDO:0013762":null,"MONDO:0013877":null,"MONDO:0014057":null,"MONDO:0014132":null,"MONDO:0014221":null,"MONDO:0014466":null,"MONDO:0014576":null,"MONDO:0014611":null,"MONDO:0014674":null,"MONDO:0014702":null,"MONDO:0014706":null,"MONDO:0014803":null,"MONDO:0015003":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null,"MONDO:0033282":null,"MONDO:0054785":null,"MONDO:0100058":null,"MONDO:0100165":null,"MONDO:0100186":null,"MONDO:0100255":null,"MONDO:0957382":null,"MONDO:0958179":null,"MONDO:0958192":null},"xrefs":{"Monarch":{"xref_id":"0045022"}}}


id: GO:1900084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-tyrosine autophosphorylation.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein autophosphorylation","termid":"GO:0031952"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"},{"relation_name":"regulates","term_name":"peptidyl-tyrosine autophosphorylation","termid":"GO:0038083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-tyrosine autophosphorylation","synonyms":[{"name":"regulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"regulation of tyrosine autophosphorylation","type":"exact"}],"termid":"GO:1900084"}


id: PATO:0001230
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's power or force.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strength","termid":"PATO:0001230"}


id: PBO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-6 (predicted)","termid":"PBO:0001157"}


id: GO:0035646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endosomes to the melanosome, a specialised lysosome-related organelle.","definition_xrefs":["PMID:16162817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome to pigment granule transport","termid":"GO:0043485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"endosome to melanosome transport","termid":"GO:0035646"}


id: GO:0061432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a methionine stimulus.","definition_xrefs":["PMID:7891681","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to methionine (obsolete GO:0061432)","termid":"GO:0061432"}


id: GO:0032184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polymer of the small ubiquitin-like protein SUMO.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO binding","termid":"GO:0032183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"SUMO polymer binding","synonyms":[{"name":"Smt3 polymer binding","type":"exact"}],"termid":"GO:0032184"}


id: PBO:0002705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0061 family protein","termid":"PBO:0002705"}


id: PBO:0062092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 42 pseudogene","termid":"PBO:0062092"}


id: MOD:00117
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-glutamine residue by a thioester bond with the formation of S-(L-isoglutamyl)-L-cysteine and the release of ammonia.","definition_xrefs":["RESID:AA0108","PubMed:6838833","ChEBI:22021","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-isoglutamyl)-L-cysteine","synonyms":[{"name":"(2S)-2-amino-5-[(2R)-2-amino-2-carboxyethyl]sulfanyl-5-oxopentanoic acid","type":"exact"},{"name":"(S,R)-2-amino-4-[S-(2-amino-2-carboxyethyl)thiocarboxy]butanoic acid","type":"exact"},{"name":"2-amino-5-(2-amino-2-carboxyethyl)thio-5-oxopentanoic acid","type":"exact"},{"name":"CROSSLNK Isoglutamyl cysteine thioester (Cys-Gln)","type":"exact"},{"name":"S-(L-isoglutamyl)-L-cysteine","type":"exact"},{"name":"S-gamma-glutamyl (crosslinked to cysteine)","type":"exact"},{"name":"XLNK-SCys-5Glu(Gln)","type":"exact"},{"name":"gamma-(S-cysteinyl)glutamic acid","type":"exact"}],"termid":"MOD:00117"}


id: MONDO:1011812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ocular squamous cell carcinoma, non-human animal","secondary_identifiers":["OMIA:000735"],"termid":"MONDO:1011812","xrefs":{"Monarch":{"xref_id":"1011812"}}}


id: PBO:0035791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2B-K119_ubiquitination_at_double-strand_break_site_during_vegetative_growth","termid":"PBO:0035791"}


id: FYPO:0007957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule rescue (the transition from shrinkage to growth) is abnormal. The frequency of rescues as well as the organisation can be affected.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule rescue","termid":"FYPO:0007957"}


id: GO:0004120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside cyclic phosphate + H2O = nucleoside phosphate. This reaction is the hydrolysis of bonds in a cyclic nucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete photoreceptor cyclic-nucleotide phosphodiesterase activity (obsolete GO:0004120)","termid":"GO:0004120"}


id: PBO:0029724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_cells_with_1C_DNA_content","termid":"PBO:0029724"}


id: PBO:0066699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 5 homolog B","termid":"PBO:0066699"}


id: PBO:0063417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE2A antisense RNA 2","termid":"PBO:0063417"}


id: GO:0044474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a voltage-gated calcium channel in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:20920515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in negative regulation of calcium channel activity in another organism","termid":"GO:0044473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of voltage-gated calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044474"}


id: MONDO:0013660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, Perthes disease, and upward gaze palsy","secondary_identifiers":["MEDGEN:481939","UMLS:C3280309","OMIM:614262"],"synonyms":[{"name":"APUG","type":"related"},{"name":"arthrogryposis, Perthes disease, and upward gaze palsy","type":"exact"}],"termid":"MONDO:0013660","xrefs":{"Monarch":{"xref_id":"0013660"}}}


id: MOD:00651
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a palmitoylamino group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-palmitoylated residue","synonyms":[{"name":"N-hexadecanoylated residue","type":"exact"},{"name":"NPamRes","type":"exact"}],"termid":"MOD:00651"}


id: GO:0140798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H3 L-arginyl (position 26)= histone H3 L-citrullyl (position 26) + NH4+, resulting in histone H3 citrullination at position 26.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 arginine deiminase activity","termid":"GO:0141057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"histone H3R26 arginine deiminase activity","synonyms":[{"name":"H3-R26 citrullination","type":"exact"},{"name":"histone H3-R26 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H3-R26 specific)","type":"exact"}],"termid":"GO:0140798"}


id: PBO:0006190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_happens_during","termid":"PBO:0006190"}


id: GO:0050821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein stability","termid":"GO:0031647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein stabilization","synonyms":[{"name":"lysosomal protein stabilization","type":"narrow"},{"name":"positive regulation of protein stability","type":"exact"},{"name":"protein sequestering","type":"related"},{"name":"protein stabilisation","type":"exact"},{"name":"protein stabilization activity","type":"related"}],"termid":"GO:0050821"}


id: _global:results_in_disappearance_of
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_ending_of","termid":"RO:0002552"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_disappearance_of","termid":"_global:results_in_disappearance_of"}


id: GO:0010919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of inositol phosphate biosynthetic process","synonyms":[{"name":"regulation of inositol phosphate biosynthesis","type":"exact"}],"termid":"GO:0010919"}


id: GO:0043815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + formate + N1-(5-phospho-beta-D-ribosyl)glycinamide = ADP + H+ + N2-formyl-N1-(5-phospho-beta-D-ribosyl)glycinamide + phosphate.","definition_xrefs":["RHEA:24829","PMID:8117714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase 2 activity","secondary_identifiers":["MetaCyc:GARTRANSFORMYL2-RXN","EC:6.3.1.21"],"synonyms":[{"name":"5'-phosphoribosylglycinamide transformylase 2","type":"exact"},{"name":"GAR transformylase 2","type":"related"},{"name":"GART 2","type":"related"},{"name":"formate-dependent GAR transformylase activity","type":"exact"}],"termid":"GO:0043815"}


id: MONDO:0020601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Viral encephalitis that is transmitted by mosquitos.","definition_xrefs":["NCIT:C34823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosquito-borne viral encephalitis","secondary_identifiers":["MEDGEN:152945","UMLS:C0751098"],"synonyms":[{"name":"mosquito-borne viral encephalitis","type":"exact"}],"termid":"MONDO:0020601","xrefs":{"Monarch":{"xref_id":"0020601"}}}


id: GO:0032507
data:
  {"annotated_genes":["SJAG_01017","SJAG_00661","SJAG_00368","SJAG_01738","SJAG_00030","SJAG_01001"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[104129,93528,99666,110314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[91639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"}]},"cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere.","definition_xrefs":["GOC:isa_complete","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location","termid":"GO:0045185"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in cell","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of protein localization in cell","type":"related"}],"termid":"GO:0032507","terms_by_termid":{"GO:0006621":null,"GO:0032065":null,"GO:0097248":null}}


id: GO:2000068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to insect.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to insect","termid":"GO:0002213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to insect","synonyms":[{"name":"regulation of physiological defense response to insect","type":"exact"}],"termid":"GO:2000068"}


id: GO:0150065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of deacetylase activity.","definition_xrefs":["GOC:bc","PMID:19457097","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of deacetylase activity","termid":"GO:0150065"}


id: PBO:0042351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD84 pseudogene 1","termid":"PBO:0042351"}


id: GO:0042869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which aldarate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"aldarate transmembrane transport","synonyms":[{"name":"aldarate transport","type":"related"}],"termid":"GO:0042869"}


id: SO:0001231
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified RNA base in which guanine is methylated at the 7- position.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven_methylguanine","synonyms":[{"name":"7-methylguanine","type":"exact"},{"name":"seven methylguanine","type":"exact"}],"termid":"SO:0001231"}


id: MONDO:1010901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in cats due to a mutation in the MFSD8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, domestic cat","termid":"MONDO:1011571"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, MFSD8-related, domestic cat","secondary_identifiers":["OMIA:001962-9685"],"synonyms":[{"name":"CLN7","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 7, domestic cat","type":"related"}],"termid":"MONDO:1010901","xrefs":{"Monarch":{"xref_id":"1010901"}}}


id: MONDO:0700234
data:
  {"annotated_genes":["SJAG_04497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010806"}]},"cv_name":"mondo","definition":"Any retinopathy caused by a variant in the PRPF8 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"PRPF8-related retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PRPF8-related retinopathy","type":"exact"}],"termid":"MONDO:0700234","terms_by_termid":{"MONDO:0010806":null},"xrefs":{"Monarch":{"xref_id":"0700234"}}}


id: PBO:0073333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 9","termid":"PBO:0073333"}


id: GO:0048531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose residue from a donor molecule to an oligosaccharide, forming a beta-1,3-linkage.","definition_xrefs":["PMID:11551958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"beta-1,3-galactosyltransferase activity","termid":"GO:0048531"}


id: PBO:0014618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside-triphosphatase involved in SSU-rRNA maturation Fap7 (predicted)","termid":"PBO:0014618"}


id: PBO:0043749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7B pseudogene 3","termid":"PBO:0043749"}


id: MONDO:0034041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, congenital, autosomal recessive axonal hereditary motor and sensory neuropathy disease characterized by axonal neuropathy, manifesting at birth or shortly thereafter with generalized muscular hypotonia, prominently distal muscular weakness, respiratory/swallowing difficulties and diffuse areflexia, associated with central nervous system involvement, which includes progressive microcephaly, seizures, and global developmental delay. Additional variable manifestations include hearing impairment, ocular lesions, skeletal anomalies (e.g. talipes equinovarus, overriding toes, scoliosis, joint contractures), cryptorchidism, and dysmorphic features (such as coarse facies, hypertelorism, high-arched palate). Outcome is typically poor due to respiratory insufficiency and/or aspiration pneumonia.","definition_xrefs":["Orphanet:538101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"axonal neuropathy","termid":"MONDO:0004183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005244"],"is_obsolete":false,"name":"congenital axonal neuropathy with encephalopathy","secondary_identifiers":["GARD:22218","MEDGEN:1814475","UMLS:C5681314"],"termid":"MONDO:0034041","xrefs":{"Monarch":{"xref_id":"0034041"}}}


id: PATO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a shape like a ring (a circular shape enclosing a space).","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring shaped","termid":"PATO:0002539"}


id: PBO:0040136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating signal cointegrator 1 complex subunit 2","termid":"PBO:0040136"}


id: PBO:0081705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF625-ZNF20 readthrough (NMD candidate)","termid":"PBO:0081705"}


id: GO:0032249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of adenosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"},{"relation_name":"regulates","term_name":"adenosine transport","termid":"GO:0032238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of adenosine transport","termid":"GO:0032249"}


id: PBO:0073261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 5","termid":"PBO:0073261"}


id: MONDO:0015592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Limbic encephalitis with LGI1 antibodies is a rare neuroimmunological disorder characterized by the onset of cognitive decline, psychiatric disturbances and seizures (distinctively faciobrachial dystonic seizures) in association with detection of LGI1 antibodies in serum or cerebrospinal fluid. Patients may present with confusion, hallucinations, vocalization, paranoia, tangentiality, aggressive outbursts and/or spatial disorientation, as well as obstinate hyponatremia. It is most often non-paraneoplastic, however comorbid tumors, such as small cell lung cancer and thymoma, have been reported.","definition_xrefs":["Orphanet:163908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postinfectious encephalitis","termid":"MONDO:0020068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limbic encephalitis with LGI1 antibodies","secondary_identifiers":["GARD:13406","MEDGEN:1645969","UMLS:C4706583","SCTID:763794005"],"synonyms":[{"name":"limbic encephalitis with leucine-rich glioma-inactivated 1 antibodies","type":"exact"}],"termid":"MONDO:0015592","xrefs":{"Monarch":{"xref_id":"0015592"}}}


id: GO:0010829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of D-glucose transmembrane transport","termid":"GO:0010827"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"negatively_regulates","term_name":"D-glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of D-glucose transmembrane transport","synonyms":[{"name":"negative regulation of glucose transmembrane transport","type":"exact"},{"name":"negative regulation of glucose transport","type":"related"}],"termid":"GO:0010829"}


id: GO:0047692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ITP + NH3.","definition_xrefs":["MetaCyc:ATP-DEAMINASE-RXN","EC:3.5.4.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine-phosphate deaminase activity","termid":"GO:0047623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"ATP deaminase activity","secondary_identifiers":["RHEA:13037"],"synonyms":[{"name":"ATP aminohydrolase activity","type":"related"},{"name":"adenosine triphosphate deaminase activity","type":"related"}],"termid":"GO:0047692"}


id: PBO:0013469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg6","termid":"PBO:0013469"}


id: PBO:0116326
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of High Pi","termid":"PBO:0116326"}


id: FYPO:0002629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactose measured in the cell wall is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased level of substance in cell wall during vegetative growth","termid":"FYPO:0002628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002946","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"galactose absent from cell wall","synonyms":[{"name":"galactose absent from cell surface","type":"related"},{"name":"galactose absent from cell wall during mitotic cell cycle","type":"related"},{"name":"galactose absent from cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0002629"}


id: GO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cytoskeleton, a cellular scaffolding or skeleton that maintains cell shape, enables some cell motion (using structures such as flagella and cilia), and plays important roles in both intra-cellular transport (e.g. the movement of vesicles and organelles) and cellular division. Includes constituent parts of intermediate filaments, microfilaments, microtubules, and the microtrabecular lattice.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal part (obsolete GO:0044430)","secondary_identifiers":["NIF_Subcellular:sao1635329413"],"synonyms":[{"name":"cytoskeletal element","type":"exact"},{"name":"cytoskeleton component","type":"exact"}],"termid":"GO:0044430"}


id: SO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequencer read of a genomic DNA substrate.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_DNA_read","synonyms":[{"name":"gDNA read","type":"exact"},{"name":"gDNA_read","type":"exact"},{"name":"genomic DNA read","type":"exact"}],"termid":"SO:0001828"}


id: PBO:0047542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 1","termid":"PBO:0047542"}


id: FYPO:0007681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a RNA-DNA hybrid ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal RNA-DNA hybrid ribonuclease activity","termid":"FYPO:0007681"}


id: FYPO:0007939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any chromatin loop formation is normal (i.e. indistinguishable from wild type) during  the meiotic prophase I.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization during meiotic cell cycle","termid":"FYPO:0007941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin loop formation during meiotic prophase I","synonyms":[{"name":"normal chromatin looping during meiotic prophase I","type":"exact"}],"termid":"FYPO:0007939"}


id: PBO:0046751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 5 pseudogene 1","termid":"PBO:0046751"}


id: MONDO:0013128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial juvenile hyperuricemic nephropathy type 2 is a rare autosomal dominantly inherited disease of childhood characterized by hypoproliferative anemia, hyperuricemia and slowly progressing kidney failure due to dysregulation of the renin-angiotensin system (RAS).","definition_xrefs":["Orphanet:217330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial juvenile hyperuricemic nephropathy","termid":"MONDO:0000608"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"familial juvenile hyperuricemic nephropathy type 2","secondary_identifiers":["MEDGEN:414347","MESH:C567760","SCTID:721840000","GARD:13461","OMIM:613092","UMLS:C2751310"],"synonyms":[{"name":"ADTKD-REN","type":"exact"},{"name":"FJHN type 2","type":"exact"},{"name":"HNFJ2","type":"related"},{"name":"REN familial juvenile hyperuricemic nephropathy","type":"exact"},{"name":"REN-associated FJHN","type":"exact"},{"name":"REN-associated familial juvenile hyperuricemic nephropathy","type":"exact"},{"name":"REN-associated kidney disease","type":"exact"},{"name":"REN-related autosomal dominant tubulointerstitial kidney disease","type":"related"},{"name":"autosomal dominant tubulointerstitial kidney disease due to mutations in REN","type":"exact"},{"name":"early-onset hyperuricemia, Anemia, and progressive kidney failure","type":"related"},{"name":"familial juvenile hyperuricemic nephropathy caused by mutation in REN","type":"exact"},{"name":"familial juvenile hyperuricemic nephropathy type 2","type":"exact"},{"name":"hyperuricemic nephropathy, familial juvenile, 2","type":"related"},{"name":"hyperuricemic nephropathy, familial juvenile, type 2","type":"exact"},{"name":"tubulointerstitial kidney disease, autosomal dominant, 4","type":"exact"}],"termid":"MONDO:0013128","xrefs":{"Monarch":{"xref_id":"0013128"}}}


id: PBO:0060690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A1","termid":"PBO:0060690"}


id: GO:0034835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-mercaptobenzothiazole + 1/2 O2 = 6-hydroxy-2-mercaptobenzothiazole.","definition_xrefs":["UM-BBD_reactionID:r1178"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-mercaptobenzothiazole monooxygenase activity (obsolete GO:0034835)","termid":"GO:0034835"}


id: MONDO:0011079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rhizomelic dysplasia, Patterson-Lowry type is a rare primary bone dysplasia characterized by short stature, severe rhizomelic shortening of the upper limbs associated with specific malformations of humeri (including marked widening and flattening of proximal metaphyses, medial flattening of the proximal epiphyses, and lateral bowing with medial cortical thickening of the proximal diaphyses), marked coxa vara with dysplastic femoral heads and brachimetacarpalia.","definition_xrefs":["Orphanet:2831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhizomelic dysplasia, Patterson-Lowry type","secondary_identifiers":["icd11.foundation:1681747199","MESH:C537609","UMLS:C1832359","GARD:4703","MEDGEN:321940","OMIM:601438","SCTID:715505002"],"synonyms":[{"name":"Patterson Lowry syndrome","type":"related"},{"name":"Patterson-Lowry rhizomelic dysplasia","type":"related"},{"name":"rhizomelic dysplasia Patterson Lowry type","type":"related"},{"name":"rhizomelic dysplasia, Patterson-Lowry type","type":"exact"}],"termid":"MONDO:0011079","xrefs":{"Monarch":{"xref_id":"0011079"}}}


id: MONDO:0016614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive ataxia due to PEX10 deficiency","secondary_identifiers":["UMLS:C5679614","MEDGEN:1843173","GARD:20666","Orphanet:247815"],"synonyms":[{"name":"mild peroxismal disorder due to PEX10 deficiency","type":"exact"}],"termid":"MONDO:0016614","xrefs":{"Monarch":{"xref_id":"0016614"}}}


id: GO:0004067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-asparagine + H2O = L-aspartate + NH3.","definition_xrefs":["EC:3.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidase activity","termid":"GO:0004040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"asparaginase activity","secondary_identifiers":["RHEA:21016","Reactome:R-HSA-6797627"],"synonyms":[{"name":"L-asparaginase activity","type":"related"},{"name":"L-asparagine amidohydrolase activity","type":"related"},{"name":"alpha-asparaginase activity","type":"related"},{"name":"asparaginase II","type":"related"},{"name":"colaspase activity","type":"related"},{"name":"crasnitin","type":"related"},{"name":"elspar","type":"related"},{"name":"leunase activity","type":"related"}],"termid":"GO:0004067"}


id: PBO:0060293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6 pseudogene 1","termid":"PBO:0060293"}


id: GO:0005375
data:
  {"annotated_genes":["SJAG_01493","SJAG_01119","SJAG_03079","SJAG_04246","SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61699,87457,100975,114035],"is_not":false,"summary":null,"term":"GO:0005375"},{"annotations":[107322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[107323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"}]},"cv_name":"molecular_function","definition":"Enables the transfer of copper (Cu) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_01493":null,"SJAG_02399":null,"SJAG_03079":null,"SJAG_04246":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"copper ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005378","GO:0005380","GO:0015088","Reactome:R-HSA-437300","GO:0005379"],"synonyms":[{"name":"copper uptake transmembrane transporter activity","type":"related"},{"name":"intracellular copper ion transporter","type":"narrow"},{"name":"plasma membrane copper transporter","type":"narrow"}],"termid":"GO:0005375","terms_by_termid":{"GO:0005375":null,"GO:0043682":null,"GO:0140581":null}}


id: PBO:0029517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_with_abnormal_cell_shape","termid":"PBO:0029517"}


id: PBO:0083461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene KNS1","termid":"PBO:0083461"}


id: MONDO:0005811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infectious disease that results in infection located in eyes or located in upper respiratory tract of domestic rabbits, has material basis in Myxoma virus, which is transmitted by mosquitos, transmitted by biting flies or transmitted by direct contact. The infection has symptom conjunctivitis with a milky discharge from the inflamed eye and has symptom breathing difficulties.","definition_xrefs":["EFO:0007327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious myxomatosis","secondary_identifiers":["MESH:D009234"],"termid":"MONDO:0005811","xrefs":{"Monarch":{"xref_id":"0005811"}}}


id: PBO:0059073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOCS2 divergent transcript","termid":"PBO:0059073"}


id: PBO:0038811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 18","termid":"PBO:0038811"}


id: PBO:0071690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 22","termid":"PBO:0071690"}


id: GO:0003803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of the Arg-Ile bond in factor X to form factor Xa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor IXa activity (obsolete GO:0003803)","synonyms":[{"name":"Christmas factor activity","type":"related"},{"name":"activated blood coagulation factor XI","type":"related"},{"name":"activated blood-coagulation factor IX","type":"related"},{"name":"activated christmas factor","type":"related"},{"name":"autoprothrombin II","type":"related"},{"name":"blood coagulation factor IX activity","type":"exact"},{"name":"blood platelet cofactor II","type":"related"},{"name":"blood-coagulation factor IXa","type":"related"},{"name":"coagulation factor IXa activity","type":"exact"}],"termid":"GO:0003803"}


id: MONDO:0009027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cramps, familial adolescent","secondary_identifiers":["MEDGEN:347475","OMIM:218050","UMLS:C1857533"],"synonyms":[{"name":"cramps, familial adolescent","type":"exact"}],"termid":"MONDO:0009027","xrefs":{"Monarch":{"xref_id":"0009027"}}}


id: PBO:0042282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1b molecule","termid":"PBO:0042282"}


id: GO:0021919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the spatial identity of regions along the dorsal-ventral axis of the spinal cord.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","PMID:12593981"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in spinal cord dorsal/ventral patterning (obsolete GO:0021919)","synonyms":[{"name":"BMP signaling pathway in spinal cord dorsoventral patterning","type":"exact"},{"name":"BMP signaling pathway involved in spinal cord dorsal-ventral patterning","type":"exact"},{"name":"BMP signalling pathway involved in spinal cord dorsal-ventral patterning","type":"exact"},{"name":"bone morphogenetic protein signaling pathway in spinal cord dorsal-ventral patterning","type":"exact"},{"name":"bone morphogenetic protein signalling pathway involved in spinal cord dorsal-ventral patterning","type":"exact"}],"termid":"GO:0021919"}


id: PBO:0028747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0028747"}


id: GO:0042092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to extracellular organisms such as helminths and pathological conditions such as allergy, which is orchestrated by the production of particular cytokines, most notably IL-4, IL-5, IL-10, and IL-13, by any of a variety of cell types including T-helper 2 cells, eosinophils, basophils, mast cells, and nuocytes, resulting in enhanced production of certain antibody isotypes and other effects.","definition_xrefs":["PMID:20200518","PMID:18000958","GOC:add","PMID:20065995","ISBN:0781735149","PMID:18007680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type 2 immune response","synonyms":[{"name":"T-helper 2 type immune response","type":"narrow"},{"name":"Th2 immune response","type":"narrow"}],"termid":"GO:0042092"}


id: PATO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000506 absolute sensitivity value (obsolete PATO:0000506)","termid":"PATO:0000506"}


id: PBO:0089691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly protein Nas2","termid":"PBO:0089691"}


id: FYPO:0001602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered level of substance in vacuole","termid":"FYPO:0001601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of substance in vacuole","synonyms":[{"name":"decreased level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"decreased level of substance in vacuole during vegetative growth","type":"exact"},{"name":"decreased vacuolar level of substance","type":"exact"},{"name":"reduced level of substance in vacuole","type":"exact"}],"termid":"FYPO:0001602"}


id: GO:0002716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of natural killer cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte mediated immunity","termid":"GO:0002707"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"negatively_regulates","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell mediated immunity","secondary_identifiers":["GO:0030102"],"synonyms":[{"name":"down regulation of natural killer cell mediated immunity","type":"exact"},{"name":"down-regulation of natural killer cell mediated immunity","type":"exact"},{"name":"downregulation of natural killer cell mediated immunity","type":"exact"},{"name":"inhibition of natural killer cell mediated immunity","type":"narrow"},{"name":"negative regulation of NK cell activity","type":"related"},{"name":"negative regulation of NK cell mediated immunity","type":"exact"},{"name":"negative regulation of natural killer cell activity","type":"related"}],"termid":"GO:0002716"}


id: PBO:0076930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor binding to IGHM enhancer 3","termid":"PBO:0076930"}


id: PATO:0001433
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process which describes the growth of an organism, structure, or group of organisms.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth quality of occurrent","secondary_identifiers":["PATO:0001489"],"synonyms":[{"name":"growth quality of a process","type":"related"},{"name":"growth timing quality","type":"related"}],"termid":"PATO:0001433"}


id: GO:0102805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: codeine + 2-oxoglutarate + O2 = morphine + formaldehyde + succinate + CO2.","definition_xrefs":["RHEA:27413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"codeine O-demethylase activity","secondary_identifiers":["EC:1.14.11.32","MetaCyc:RXN-8152"],"termid":"GO:0102805"}


id: MONDO:0016129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic gastroenteritis (EGE) is a rare benign gastrointestinal disease characterized by the presence of abnormal and nonspecific gastro-intestinal (GI) manifestations, associated with an eosinophilic infiltration of the GI tract, which can affect several segments and involve several layers within the GI wall.","definition_xrefs":["Orphanet:2070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastroenteritis","termid":"MONDO:0002269"},{"relation_name":"is_a","term_name":"eosinophilic gastrointestinal disease","termid":"MONDO:0018438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"eosinophilic gastroenteritis","secondary_identifiers":["MedDRA:10017902","DOID:4031","ICD9:558.41","GARD:9142","NANDO:1200457","SCTID:359804008","NORD:1097","MEDGEN:220382","NCIT:C35330","UMLS:C1262481"],"synonyms":[{"name":"EGE","type":"exact"},{"name":"eosinophilic enteritis","type":"exact"},{"name":"eosinophilic gastroenteritis","type":"exact"},{"name":"eosinophilic gastroenterocolitis","type":"exact"}],"termid":"MONDO:0016129","xrefs":{"Monarch":{"xref_id":"0016129"}}}


id: FYPO:0000719
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119017],"is_not":false,"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal fatty acid synthase activity","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"synonyms":[{"name":"normal FAS activity","type":"exact"}],"termid":"FYPO:0000719","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: GO:0072375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The memory process that deals with the storage, retrieval and modification of information received at a time ago that is intermediate between that of short and long term memory (30min - 7hrs in Drosophila melanogaster).","definition_xrefs":["PMID:7923375","GOC:sart","PMID:14659098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"memory","termid":"GO:0007613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medium-term memory","synonyms":[{"name":"MTM","type":"narrow"},{"name":"middle-term memory","type":"exact"}],"termid":"GO:0072375"}


id: MONDO:0010894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monogenic diabetes caused by inactivating mutation(s) in the gene HNF1A, encoding hepatocyte nuclear factor 1-alpha.","definition_xrefs":["NCIT:C129742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0037792","MONDO:0005015","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 3","secondary_identifiers":["MESH:C563933","OMIM:600496","NANDO:2201071","MEDGEN:324942","DOID:0111102","GARD:10658","SCTID:609570008","UMLS:C1838100"],"synonyms":[{"name":"HNF1A maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"HNF1A-associated monogenic diabetes","type":"exact"},{"name":"MODY hepatocyte nuclear factor-1-alpha related","type":"related"},{"name":"MODY type 3","type":"exact"},{"name":"MODY, type 3","type":"related"},{"name":"MODY, type III","type":"exact"},{"name":"MODY3","type":"exact"},{"name":"diabetes mellitus MODY type 3","type":"related"},{"name":"hepatocyte nuclear Factor 1-Alpha-associated monogenic diabetes","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in HNF1A","type":"exact"},{"name":"maturity-onset diabetes of the young type 3","type":"exact"},{"name":"maturity-onset diabetes of the young, type 3","type":"related"},{"name":"type 3 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0010894","xrefs":{"Monarch":{"xref_id":"0010894"}}}


id: MOD:00126
data:
  {"annotated_genes":["SJAG_00464"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80165],"is_not":false,"summary":null,"term":"MOD:00126"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-biotinyl-L-lysine.","definition_xrefs":["PubMed:7948875","PubMed:8747466","RESID:AA0117","Unimod:3#K","PubMed:16109483","DeltaMass:305","PubMed:3178228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"biotinylated residue","termid":"MOD:01885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-biotinyl-L-lysine","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"(2S)-2-amino-6-(5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoylamino)hexanoic acid","type":"exact"},{"name":"(3aS-(3aalpha,4beta,6aalpha))-N6-(5-(hexahydro-2-oxo-1H-thieno(3,4-d)imidazol-4-yl)-1-oxopentyl)-L-lysine","type":"exact"},{"name":"Biotin","type":"related"},{"name":"Biotinylation","type":"related"},{"name":"MOD_RES N6-biotinyllysine","type":"exact"},{"name":"N6-[5-((3aS,4S,6aR)-hexahydro-2-oxo-1H-thieno[3,4-d]imidazol-4-yl)-1-oxopentyl]-L-lysine","type":"exact"},{"name":"N6-biotinyl-L-lysine","type":"exact"},{"name":"N6-biotinyllysine","type":"exact"},{"name":"N6BtnLys","type":"exact"},{"name":"biocytin","type":"exact"},{"name":"biotinyl lysyl","type":"exact"},{"name":"epsilon-N-biotinyllysine","type":"exact"}],"termid":"MOD:00126","terms_by_termid":{"MOD:00126":null}}


id: PBO:0058946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 5","termid":"PBO:0058946"}


id: PBO:0040735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 1","termid":"PBO:0040735"}


id: GO:1903235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion-dependent exocytosis of neurotransmitter.","definition_xrefs":["PMID:16782817","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion-dependent exocytosis","termid":"GO:0045956"},{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis of neurotransmitter","termid":"GO:1903233"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle exocytosis","termid":"GO:2000302"},{"relation_name":"positively_regulates","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion-dependent exocytosis of neurotransmitter","synonyms":[{"name":"activation of calcium ion-dependent exocytosis of neurotransmitter","type":"narrow"},{"name":"up regulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"},{"name":"up-regulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"},{"name":"upregulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"}],"termid":"GO:1903235"}


id: MOD:01861
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a cysteine thiol with the amido nitrogen of the following residue to form an isothiazolidinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"}


id: FYPO:0003425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another does not occur during a cellular response to rapamycin. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"abolished protein-protein interaction during cellular response to rapamycin","synonyms":[{"name":"abolished protein binding during cellular response to rapamycin","type":"exact"},{"name":"protein-protein interaction abolished during cellular response to rapamycin","type":"exact"}],"termid":"FYPO:0003425"}


id: MONDO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An undifferentiated pleomorphic sarcoma arising from the skin. It is characterized by the presence of spindle cells in a storiform pattern and histiocytes with abundant cytoplasm.","definition_xrefs":["NCIT:C5576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undifferentiated pleomorphic sarcoma","termid":"MONDO:0002142"},{"relation_name":"is_a","term_name":"skin sarcoma","termid":"MONDO:0006414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"cutaneous undifferentiated pleomorphic sarcoma","secondary_identifiers":["MEDGEN:224813","SCTID:404014008","UMLS:C1275254","DOID:1906","ICD9:171.9"],"synonyms":[{"name":"cutaneous malignant fibrous histiocytoma","type":"exact"},{"name":"cutaneous unclassified pleomorphic sarcoma","type":"exact"},{"name":"cutaneous unclassified pleomorphic sarcoma (formerly cutaneous \"MFH\")","type":"exact"},{"name":"cutaneous unclassified pleomorphic sarcoma (formerly cutaneous \"malignant fibrous histiocytoma\")","type":"exact"},{"name":"cutaneous unclassified pleomorphic sarcoma (formerly cutaneous)","type":"exact"},{"name":"cutaneous undifferentiated pleomorphic sarcoma","type":"exact"},{"name":"malignant cutaneous fibrous histiocytoma","type":"exact"},{"name":"malignant fibrous histiocytoma of skin","type":"exact"},{"name":"malignant fibrous histiocytoma of the skin","type":"exact"},{"name":"malignant skin fibrous histiocytoma","type":"exact"},{"name":"undifferentiated pleomorphic sarcoma of zone of skin","type":"exact"},{"name":"zone of skin undifferentiated pleomorphic sarcoma","type":"exact"}],"termid":"MONDO:0002141","xrefs":{"Monarch":{"xref_id":"0002141"}}}


id: PBO:0040255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATG10 antisense RNA 1","termid":"PBO:0040255"}


id: PBO:0044322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 2","termid":"PBO:0044322"}


id: GO:0102685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + trans-zeatin = H+ + trans-zeatin-7-N-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:trans-zeatin 7-N-glucosyltransferase activity (obsolete GO:0102685)","termid":"GO:0102685"}


id: PBO:0041342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 49","termid":"PBO:0041342"}


id: FYPO:0003851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on MTT","synonyms":[{"name":"normal cell population growth in presence of MTT","type":"exact"},{"name":"normal cell population growth on MTT","type":"exact"},{"name":"normal cellular response to MTT","type":"related"},{"name":"normal growth on 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide","type":"exact"},{"name":"normal vegetative cell population growth on MTT","type":"exact"}],"termid":"FYPO:0003851"}


id: MONDO:0013551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the AP4B1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 47","secondary_identifiers":["OMIM:614066","UMLS:C3279738","MEDGEN:481368","NORD:1993","NCIT:C164224","DOID:0110799","GARD:15749"],"synonyms":[{"name":"AP4B1 hereditary spastic paraplegia","type":"exact"},{"name":"CPSQ5","type":"exact"},{"name":"SPG47","type":"exact"},{"name":"Spastic Paraplegia 47","type":"exact"},{"name":"autosomal recessive spastic paraplegia 47","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, 5","type":"related"},{"name":"cerebral palsy, spastic quadriplegic, 5, formerly","type":"related"},{"name":"hereditary spastic paraplegia 47","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in AP4B1","type":"exact"},{"name":"hereditary spastic paraplegia type 47","type":"exact"},{"name":"spastic paraplegia 47, autosomal recessive","type":"related"},{"name":"spastic quadriplegic cerebral palsy 5","type":"exact"}],"termid":"MONDO:0013551","xrefs":{"Monarch":{"xref_id":"0013551"}}}


id: PBO:0011185
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression","termid":"PBO:0011185"}


id: MONDO:0023419
data:
  {"annotated_genes":["SJAG_01903","SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009400"},{"annotations":[86224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009401"}]},"cv_name":"mondo","definition":"Hyperprolinemia is when there isan excess of a particular protein building block (amino acid), called proline, in the blood. This condition generally occurs when proline is not broken down properly by the body. There are two inherited forms:hyperprolinemia type1 and hyperprolinemia type 2. People with hyperprolinemia type I often do not show any symptoms, although they have proline levels in their blood between 3 and 10 times the normal level. Less commonly, affected individuals can experience seizures, intellectual disability, or other neurological or psychiatric problems. Hyperprolinemia is caused by mutations in the PRODH gene and is inherited in an autosomal recessive pattern.","definition_xrefs":["GARD:0002847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of proline metabolism","termid":"MONDO:0017355"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hyperprolinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200471","MEDGEN:75690","DOID:0080541","ICD9:270.8","SCTID:59655002","GARD:2847","UMLS:C0268528"],"synonyms":[{"name":"hyperprolinemia type 1","type":"related"},{"name":"proline hydrogenase deficiency","type":"related"},{"name":"proline oxidase deficiency","type":"related"}],"termid":"MONDO:0023419","terms_by_termid":{"MONDO:0009400":null,"MONDO:0009401":null},"xrefs":{"Monarch":{"xref_id":"0023419"}}}


id: FYPO:0001872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which adhesion of a cell to a substrate or another cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell adhesion","synonyms":[{"name":"adhesion defects","type":"exact"}],"termid":"FYPO:0001872"}


id: MONDO:0021530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the subglottis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subglottis neoplasm","termid":"MONDO:0000933"},{"relation_name":"is_a","term_name":"benign laryngeal neoplasm","termid":"MONDO:0002354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of subglottis","secondary_identifiers":["NCIT:C4427","SCTID:92412003","MEDGEN:83388","UMLS:C0345749"],"synonyms":[{"name":"benign neoplasm of the subglottis","type":"exact"},{"name":"benign subglottic neoplasm","type":"exact"},{"name":"benign subglottic tumor","type":"exact"},{"name":"benign subglottic tumour","type":"exact"},{"name":"benign subglottis neoplasm","type":"exact"},{"name":"benign subglottis tumor","type":"exact"},{"name":"benign subglottis tumour","type":"exact"},{"name":"benign tumor of subglottis","type":"exact"},{"name":"benign tumor of the subglottis","type":"exact"},{"name":"benign tumour of subglottis","type":"exact"},{"name":"benign tumour of the subglottis","type":"exact"},{"name":"subglottis benign neoplasm","type":"exact"}],"termid":"MONDO:0021530","xrefs":{"Monarch":{"xref_id":"0021530"}}}


id: GO:0019855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a calcium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel regulator activity","termid":"GO:0005246"},{"relation_name":"is_a","term_name":"ion channel inhibitor activity","termid":"GO:0008200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"calcium channel inhibitor activity","termid":"GO:0019855"}


id: MONDO:0019685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGFR3-related chondrodysplasia","secondary_identifiers":["GARD:19185","Orphanet:93420","MEDGEN:1842866","UMLS:C5681604"],"termid":"MONDO:0019685","xrefs":{"Monarch":{"xref_id":"0019685"}}}


id: MONDO:0010932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive bifocal chorioretinal atrophy (PBCRA) is an early-onset chorioretinal dystrophy characterized by large atrophic macular and nasal retinal lesions, nystagmus, myopia, poor vision, and slow disease progression.","definition_xrefs":["Orphanet:75373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"progressive bifocal chorioretinal atrophy","secondary_identifiers":["MESH:C535356","SCTID:719266007","icd11.foundation:1936121929","OMIM:600790","UMLS:C1833321","GARD:10123","MEDGEN:371537"],"synonyms":[{"name":"CRAPB","type":"exact"},{"name":"Crapb","type":"related"},{"name":"PBCRA","type":"exact"},{"name":"chorioretinal atrophy, progressive bifocal","type":"related"},{"name":"progressive bifocal chorioretinal atrophy","type":"exact"}],"termid":"MONDO:0010932","xrefs":{"Monarch":{"xref_id":"0010932"}}}


id: PBO:0045345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"docking protein 5","termid":"PBO:0045345"}


id: PBO:0018124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding involved in ER to Golgi vesicle transport Yip3 (predicted)","termid":"PBO:0018124"}


id: PBO:0065917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGEF1 pseudogene 3","termid":"PBO:0065917"}


id: PBO:0065453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 1","termid":"PBO:0065453"}


id: PBO:0013007
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae RAD5","termid":"PBO:0013007"}


id: GO:0009587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phototrophin mediated phototransduction (obsolete GO:0009587)","synonyms":[{"name":"phototrophin mediated phototransduction","type":"exact"}],"termid":"GO:0009587"}


id: PBO:0033794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_iron_ion_starvation-induced_proteins","termid":"PBO:0033794"}


id: MONDO:1011707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyserythropoietic anemia, non-human animal","secondary_identifiers":["OMIA:002300"],"termid":"MONDO:1011707","xrefs":{"Monarch":{"xref_id":"1011707"}}}


id: GO:1904285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein-pyridoxal-5-phosphate linkage.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25957689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein-pyridoxal-5-phosphate linkage","termid":"GO:1904285"}


id: GO:0004515
data:
  {"annotated_genes":["SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99560],"is_not":false,"summary":null,"term":"GO:0004515"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + nicotinate ribonucleotide = diphosphate + deamido-NAD+.","definition_xrefs":["EC:2.7.7.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"nicotinate-nucleotide adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:NICONUCADENYLYLTRAN-RXN","Reactome:R-HSA-200512","Reactome:R-HSA-197235","Reactome:R-HSA-200474","RHEA:22860"],"synonyms":[{"name":"ATP:nicotinate-nucleotide adenylyltransferase activity","type":"exact"},{"name":"ATP:nicotinate-ribonucleotide adenylyltransferase activity","type":"related"},{"name":"NaMN-ATase activity","type":"related"},{"name":"deamido-NAD(+) diphosphorylase activity","type":"related"},{"name":"deamido-NAD(+) pyrophosphorylase activity","type":"related"},{"name":"deamido-NAD+ pyrophosphorylase activity","type":"related"},{"name":"deamidonicotinamide adenine dinucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinate mononucleotide adenylyltransferase activity","type":"related"},{"name":"nicotinic acid mononucleotide adenylyltransferase","type":"narrow"}],"termid":"GO:0004515","terms_by_termid":{"GO:0004515":null}}


id: PR:O42995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis19 gene.","definition_xrefs":["UniProtKB:O42995","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPBC27B12.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.02","synonyms":[{"name":"Spom972h-mis19","type":"exact"}],"termid":"PR:O42995"}


id: PR:O13746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16E8.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E8.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.18","synonyms":[{"name":"Spom972h-SPAC16E8.18","type":"exact"}],"termid":"PR:O13746"}


id: GO:0060647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell adhesion process in which mammary mesenchyme cells adhere to one another in the initial stages of the formation of mammary fat development.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"mammary gland fat development","termid":"GO:0060611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"mesenchymal cell condensation involved in mammary fat development","termid":"GO:0060647"}


id: PBO:0041204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BVES antisense RNA 1","termid":"PBO:0041204"}


id: GO:0099038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of ceramide from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid floppase activity","termid":"GO:0046623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0140303","GO:0005215"],"is_obsolete":false,"name":"ceramide floppase activity","synonyms":[{"name":"ATP-dependent ceramide transporter activity","type":"broad"},{"name":"ATPase-coupled ceramide transporter activity","type":"broad"},{"name":"ceramide floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"},{"name":"ceramide-translocating ATPase activity","type":"broad"}],"termid":"GO:0099038"}


id: GO:0015196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-tryptophan from one side of a membrane to the other. Tryptophan is 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-tryptophan transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-8870352","GO:0005299"],"synonyms":[{"name":"L-tryptophan permease activity","type":"exact"},{"name":"L-tryptophan transporter activity","type":"broad"},{"name":"valine/tyrosine/tryptophan permease activity","type":"narrow"}],"termid":"GO:0015196"}


id: GO:0043974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 27 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 acetylation (obsolete GO:0043974)","synonyms":[{"name":"histone H3 acetylation at K27","type":"exact"},{"name":"histone H3K27 acetylation","type":"exact"}],"termid":"GO:0043974"}


id: PBO:0041969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC12 pseudogene 1","termid":"PBO:0041969"}


id: MONDO:0003463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the ovary characterized by the presence of glandular structures with endometrial-type well-differentiated cells in a fibrotic stroma.","definition_xrefs":["NCIT:C27287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian endometrioid adenofibroma","secondary_identifiers":["UMLS:C2212024","ICDO:8380/0","DOID:5480","ICDO:8381/0","MEDGEN:389179"],"synonyms":[{"name":"ovarian endometrioid adenofibroma","type":"exact"}],"termid":"MONDO:0003463","xrefs":{"Monarch":{"xref_id":"0003463"}}}


id: FYPO:0005275
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118742,118702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[118752,118750,118751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a mitotic cell cycle phase transition normally.","definition_xrefs":["PomBase:mah","GO:0044772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abnormal cell cycle phase transition","termid":"FYPO:0005273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle phase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_03351","SJAG_01330","SJAG_03575"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","mad2delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0005275","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: PBO:0059200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X7, pseudogene","termid":"PBO:0059200"}


id: PBO:0051758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 4","termid":"PBO:0051758"}


id: PBO:0080293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 57 pseudogene","termid":"PBO:0080293"}


id: PBO:0108595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG2 interacting ribosome maturation factor","termid":"PBO:0108595"}


id: MONDO:0011568
data:
  {"annotated_genes":["SJAG_05175","SJAG_04706","SJAG_02139","SJAG_05182","SJAG_04295"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85033,85034,85035,85036,85037],"is_not":false,"summary":null,"term":"MONDO:0011568"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the SLC17A8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 25","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110555","MEDGEN:344221","UMLS:C1854158","MESH:C565319","OMIM:605583","GARD:18112"],"synonyms":[{"name":"DFNA25","type":"narrow"},{"name":"SLC17A8 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 25","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 25","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in SLC17A8","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 25","type":"narrow"},{"name":"deafness, autosomal dominant 25","type":"narrow"},{"name":"deafness, autosomal dominant type 25","type":"narrow"}],"termid":"MONDO:0011568","terms_by_termid":{"MONDO:0011568":null},"xrefs":{"Monarch":{"xref_id":"0011568"}}}


id: GO:1900340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from formic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from formic acid","termid":"GO:1900339"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from formic acid","termid":"GO:2001127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from formic acid","synonyms":[{"name":"down regulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"down-regulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"downregulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"inhibition of methane biosynthetic process from formic acid","type":"narrow"}],"termid":"GO:1900340"}


id: PBO:0017916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide pyrophosphatase Npp1 (predicted)","termid":"PBO:0017916"}


id: PBO:0017842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione transmembrane transporter Pgt1","termid":"PBO:0017842"}


id: MONDO:0020413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encircling double aortic arch is a very rare congenital anomaly of the great arteries characterized by the presence of two aortic arches (right and left) which encircle and compress the trachea and esophagus, resulting in various respiratory and gastrointestinal symptoms (e.g. harsh breathing, stridor, dyspnea, cyanotic and choking episodes, chronic cough, recurrent respiratory tract infections, dysphagia and reflux). Esophageal atresia and tracheoesophageal fistula have also been reported. It usually occurs isolated, but, on occasion, may be associated with other congenital heart anomalies and chromosomal aberations.","definition_xrefs":["Orphanet:99075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic arch defects","termid":"MONDO:0015236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encircling double aortic arch","secondary_identifiers":["MEDGEN:1641325","GARD:19635","UMLS:C4706940","NANDO:2200290","SCTID:764521002"],"termid":"MONDO:0020413","xrefs":{"Monarch":{"xref_id":"0020413"}}}


id: GO:1902831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mr","PMID:21730158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of spinal cord association neuron differentiation","termid":"GO:1902829"},{"relation_name":"positively_regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of spinal cord association neuron differentiation","synonyms":[{"name":"activation of spinal cord association neuron differentiation","type":"narrow"},{"name":"activation of spinal cord dorsal interneuron differentiation","type":"narrow"},{"name":"positive regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"up regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"up regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"up-regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"up-regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"upregulation of spinal cord association neuron differentiation","type":"exact"},{"name":"upregulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902831"}


id: PBO:0091405
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by D. melanogaster Cdc5","termid":"PBO:0091405"}


id: FYPO:0009008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which a larger than normal proportion of cells is viable. In High Throughput Phenotyping this is typically assessed using phloxine as a dye.","definition_xrefs":["PomBase:mlr","PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased vegetative cell population viability","synonyms":[{"name":"increased cell population viability during vegetative growth","type":"exact"}],"termid":"FYPO:0009008"}


id: PBO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.105","termid":"PBO:0000697"}


id: PBO:0041448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 152","termid":"PBO:0041448"}


id: GO:2000046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of G2 phase of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G2 phase of mitotic cell cycle (obsolete GO:2000046)","synonyms":[{"name":"regulation of G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:2000046"}


id: MONDO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung with reduced markings on its chest radiograph and increased areas of transradiancy (hyperlucency). A hyperlucent lung is usually associated with pulmonary emphysema or pneumothorax.","definition_xrefs":["MESH:D019568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlucent lung","secondary_identifiers":["MEDGEN:101178","DOID:10032","UMLS:C0524799"],"termid":"MONDO:0000925","xrefs":{"Monarch":{"xref_id":"0000925"}}}


id: GO:0008490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arsenite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsenite transmembrane transporter activity","termid":"GO:0015105"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"arsenite secondary active transmembrane transporter activity","secondary_identifiers":["GO:0008491"],"synonyms":[{"name":"arsenite porter activity","type":"related"}],"termid":"GO:0008490"}


id: PBO:0051755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction protein for cytohesin exchange factors 1","termid":"PBO:0051755"}


id: MONDO:0026188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic overgrowth/obesity syndrome (obsolete MONDO:0026188)","secondary_identifiers":["Orphanet:183573"],"termid":"MONDO:0026188","xrefs":{"Monarch":{"xref_id":"0026188"}}}


id: PBO:0056397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein RP/EB family member 2","termid":"PBO:0056397"}


id: PBO:0089311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid8","termid":"PBO:0089311"}


id: GO:0010129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyclohexane-1-carboxylate, a alicyclic acid, in the absence of oxygen.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic cyclohexane-1-carboxylate catabolic process","secondary_identifiers":["MetaCyc:PWY-301"],"synonyms":[{"name":"anaerobic cyclohexane-1-carboxylate breakdown","type":"exact"},{"name":"anaerobic cyclohexane-1-carboxylate catabolism","type":"exact"},{"name":"anaerobic cyclohexane-1-carboxylate degradation","type":"exact"}],"termid":"GO:0010129"}


id: MONDO:0011908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myelodysplastic/myeloproliferative neoplasm of childhood that is characterized by proliferation principally of the granulocytic and monocytic lineages. Myelomonocytic proliferation is seen in the bone marrow and the blood. The leukemic cells may infiltrate any tissue, however liver, spleen, lymph nodes, skin, and respiratory tract are the most common sites of involvement. (WHO, 2001)","definition_xrefs":["NCIT:C9233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic myelomonocytic leukemia","termid":"MONDO:0020311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"juvenile myelomonocytic leukemia","secondary_identifiers":["NORD:1316","ONCOTREE:JMML","NANDO:2200015","OMIM:607785","MESH:D054429","icd11.foundation:1786015803","GARD:9884","SCTID:445227008","Orphanet:86834","MedDRA:10023249","MEDGEN:138109","UMLS:C0349639","NANDO:2200014","DOID:0050458","ICDO:9946/3","EFO:1000309"],"synonyms":[{"name":"JCML","type":"exact"},{"name":"JMML","type":"exact"},{"name":"chronic myelomonocytic leukaemia","type":"broad"},{"name":"chronic myelomonocytic leukemia","type":"broad"},{"name":"juvenile chronic myelogenous leukaemia","type":"exact"},{"name":"juvenile chronic myelogenous leukemia","type":"exact"},{"name":"juvenile chronic myeloid leukaemia","type":"exact"},{"name":"juvenile chronic myeloid leukemia","type":"exact"},{"name":"juvenile chronic myelomonocytic leukaemia","type":"exact"},{"name":"juvenile chronic myelomonocytic leukemia","type":"exact"},{"name":"juvenile myelomonocytic leukemia","type":"exact"},{"name":"juvenile myelomonocytic leukemia, autosomal dominant, somatic mutation","type":"exact"},{"name":"leukemia, chronic myelomonocytic","type":"related"},{"name":"leukemia, juvenile myelomonocytic","type":"related"},{"name":"leukemia, juvenile myelomonocytic, autosomal dominant, somatic mutation","type":"exact"},{"name":"leukemia, juvenile myelomonocytic, somatic","type":"exact"}],"termid":"MONDO:0011908","xrefs":{"Monarch":{"xref_id":"0011908"}}}


id: PBO:0072852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 2","termid":"PBO:0072852"}


id: PBO:0005528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein Svf1","termid":"PBO:0005528"}


id: PBO:0087842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine synthase; conserved protein that catalyzes formation of threonine from O-phosphohomoserine; expression is regulated by the GCN4-mediated general amino acid control pathway","termid":"PBO:0087842"}


id: MONDO:0012687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"familial cavitary optic disk anomaly","secondary_identifiers":["MEDGEN:370593","MESH:C566924","UMLS:C1969063","GARD:17822","OMIM:611543","Orphanet:464760"],"synonyms":[{"name":"CODA","type":"related"},{"name":"cavitary optic DISC anomalies","type":"related"},{"name":"familial CODA","type":"exact"}],"termid":"MONDO:0012687","xrefs":{"Monarch":{"xref_id":"0012687"}}}


id: PBO:0028124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_pear-shaped_vegetative_cell","termid":"PBO:0028124"}


id: GO:0019770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of an IgG isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"IgG receptor activity","termid":"GO:0019770"}


id: PBO:0062569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AH member 1 pseudogene","termid":"PBO:0062569"}


id: GO:0106160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of small RNA loading onto RISC.","definition_xrefs":["PMID:29775584","GOC:ha"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of small RNA loading onto RISC (obsolete GO:0106160)","termid":"GO:0106160"}


id: PBO:0005405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Got1 (predicted)","termid":"PBO:0005405"}


id: PBO:0004153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma1 (predicted)","termid":"PBO:0004153"}


id: MONDO:0006603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, epidermal skin lesion characterized by overexpression of collagen during wound healing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"reactive cutaneous fibrous lesion","secondary_identifiers":["UMLS:C1335666","NCIT:C27549","EFO:1000759","MEDGEN:235529","DOID:2053"],"termid":"MONDO:0006603","xrefs":{"Monarch":{"xref_id":"0006603"}}}


id: MONDO:0002993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine tumor arising from the delta cells of the pancreas. It is characterized by inappropriate secretion of somatostatin and associated with diabetes mellitus, hypochlorhydria, gallbladder disease, diarrhea, steatorrhea, anemia, and weight loss.","definition_xrefs":["NCIT:C95595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic delta cell neuroendocrine tumor","termid":"MONDO:0002994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic somatostatinoma","secondary_identifiers":["DOID:4432","MEDGEN:235079","UMLS:C1368041"],"synonyms":[{"name":"pancreatic delta cell somatostatin producing neoplasm","type":"exact"},{"name":"pancreatic somatostatin cell tumor","type":"exact"},{"name":"pancreatic somatostatin cell tumour","type":"exact"}],"termid":"MONDO:0002993","xrefs":{"Monarch":{"xref_id":"0002993"}}}


id: FYPO:0004285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mitomycin C.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on mitomycin C","synonyms":[{"name":"normal cell population growth in presence of mitomycin C","type":"exact"},{"name":"normal cell population growth on mitomycin C","type":"exact"},{"name":"normal vegetative cell population growth on mitomycin C","type":"exact"}],"termid":"FYPO:0004285"}


id: GO:2000104
data:
  {"annotated_genes":["SJAG_03048","SJAG_03997","SJAG_04855","SJAG_04671","SJAG_00247","SJAG_01210","SJAG_01068","SJAG_03097","SJAG_02162","SJAG_02724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108349,116293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[97271,101858,108350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[102711],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[101766,106100,107976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043111"},{"annotations":[98861,102712,107977,106101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[98862,101767,114465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[98863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[101768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-dependent DNA replication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA replication","termid":"GO:0008156"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"negatively_regulates","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01068":null,"SJAG_01210":null,"SJAG_02162":null,"SJAG_02724":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"negative regulation of DNA-templated DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of DNA-dependent DNA replication","type":"exact"}],"termid":"GO:2000104","terms_by_termid":{"GO:0011000":null,"GO:0031582":null,"GO:0043111":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null,"GO:1903464":null,"GO:1903467":null}}


id: GO:0030074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A thylakoid; as in, but not restricted to, the purple bacteria and relatives (Proteobacteria, ncbi_taxonomy_id:1224).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete thylakoid (sensu Proteobacteria) (obsolete GO:0030074)","synonyms":[{"name":"thylakoid (sensu Proteobacteria)","type":"exact"}],"termid":"GO:0030074"}


id: MOD:01354
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N4 hydrogen atom of an asparagine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["Unimod:149#N","PubMed:11698400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc1 glycosylated residue","termid":"MOD:00517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"}],"termid":"MOD:01354"}


id: GO:0047327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + D-glucose = D-glucose 6-phosphate + glycerol.","definition_xrefs":["RHEA:21288","EC:2.7.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"glycerol-3-phosphate-glucose phosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R00850","MetaCyc:2.7.1.142-RXN"],"synonyms":[{"name":"sn-glycerol-3-phosphate:D-glucose 6-phosphotransferase activity","type":"related"}],"termid":"GO:0047327"}


id: GO:1900014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell in response to the presence of 3',5'-cAMP that results in a change in state or activity (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.","definition_xrefs":["PMID:19363786","PMID:21239624","PMID:8937985","GOC:pf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to calcium ion involved in chemotaxis to cAMP (obsolete GO:1900014)","synonyms":[{"name":"cellular response to Ca2+ ion of chemotaxis to 3',5' cAMP","type":"exact"},{"name":"cellular response to Ca2+ ion of chemotaxis to 3',5'-cAMP","type":"exact"},{"name":"cellular response to Ca2+ ion of chemotaxis to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"cellular response to Ca2+ ion of chemotaxis to cAMP","type":"related"},{"name":"cellular response to Ca2+ ion of chemotaxis to cyclic AMP","type":"exact"},{"name":"cellular response to calcium ion involved in chemotaxis to cAMP","type":"exact"},{"name":"cellular response to calcium ion of chemotaxis to 3',5' cAMP","type":"related"},{"name":"cellular response to calcium ion of chemotaxis to 3',5'-cAMP","type":"related"},{"name":"cellular response to calcium ion of chemotaxis to adenosine 3',5'-cyclophosphate","type":"related"},{"name":"cellular response to calcium ion of chemotaxis to cAMP","type":"related"},{"name":"cellular response to calcium ion of chemotaxis to cyclic AMP","type":"related"}],"termid":"GO:1900014"}


id: PBO:0091032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Nop12","termid":"PBO:0091032"}


id: PBO:0081894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 845","termid":"PBO:0081894"}


id: GO:0140194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of an adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process (obsolete GO:0140194)","termid":"GO:0140194"}


id: PBO:0038499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 8","termid":"PBO:0038499"}


id: MONDO:0005546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic disorder of unknown etiology characterized by pain, stiffness, and tenderness in the muscles of neck, shoulders, back, hips, arms, and legs. Other signs and symptoms include headaches, fatigue, sleep disturbances, and painful menstruation.","definition_xrefs":["NCIT:C87497"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myositis disease","termid":"MONDO:0021167"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chronic pain syndrome","termid":"MONDO:0024317"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromyalgia","secondary_identifiers":["MEDGEN:42018","UMLS:C0016053","SCTID:203082005","SCTID:24693007","EFO:0005687","ICD9:729.1","Orphanet:41842","ICD10CM:M79.7","DOID:631","MESH:D005356"],"synonyms":[{"name":"fibromyalgia","type":"exact"},{"name":"fibromyalgia syndrome","type":"exact"}],"termid":"MONDO:0005546","xrefs":{"Monarch":{"xref_id":"0005546"}}}


id: GO:1901015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3alpha(S)-strictosidine.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"3alpha(S)-strictosidine biosynthetic process","secondary_identifiers":["GO:1901013"],"synonyms":[{"name":"3alpha(S)-strictosidine anabolism","type":"exact"},{"name":"3alpha(S)-strictosidine biosynthesis","type":"exact"},{"name":"3alpha(S)-strictosidine formation","type":"exact"},{"name":"3alpha(S)-strictosidine metabolic process","type":"broad"},{"name":"3alpha(S)-strictosidine metabolism","type":"exact"},{"name":"3alpha(S)-strictosidine synthesis","type":"exact"}],"termid":"GO:1901015"}


id: MONDO:0017466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudoarthrosis of the limbs","termid":"MONDO:0015525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of the ulna","secondary_identifiers":["MEDGEN:1843296","UMLS:C5679937","GARD:21207","Orphanet:295026"],"synonyms":[{"name":"congenital pseudarthrosis of the ulna","type":"exact"}],"termid":"MONDO:0017466","xrefs":{"Monarch":{"xref_id":"0017466"}}}


id: MONDO:0016309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Niemann-Pick disease type C","termid":"MONDO:0018982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002525","MONDO:0005066","MONDO:0006025","MONDO:0002561"],"is_obsolete":false,"name":"Niemann-Pick disease type C, juvenile neurologic onset","secondary_identifiers":["UMLS:C5679813","MEDGEN:1842257","icd11.foundation:2006062681","Orphanet:216981","GARD:20507"],"synonyms":[{"name":"Niemann-Pick disease type C, classic form","type":"exact"}],"termid":"MONDO:0016309","xrefs":{"Monarch":{"xref_id":"0016309"}}}


id: GO:0071765
data:
  {"annotated_genes":["SJAG_03491","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90854,117607],"is_not":false,"summary":null,"term":"GO:0071765"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear inner membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03491":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear inner membrane organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear inner membrane organisation","type":"exact"},{"name":"nuclear inner membrane organization and biogenesis","type":"related"}],"termid":"GO:0071765","terms_by_termid":{"GO:0071765":null}}


id: PBO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.2","termid":"PBO:0002208"}


id: PBO:0003678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family Isp4","termid":"PBO:0003678"}


id: GO:0009875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction between a pollen grain and pistil.","definition_xrefs":["PMID:27899537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen-pistil interaction","synonyms":[{"name":"pollen-gynoecium interaction","type":"exact"}],"termid":"GO:0009875"}


id: PBO:0084331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-associated protein; required for both karyogamy and mitotic spindle organization, interacts stably and specifically with Kar3p and may function to target this kinesin to a specific cellular role; locus encodes a long and short transcript with differing functions; CIK1 has a paralog, VIK1, that arose from the whole genome duplication","termid":"PBO:0084331"}


id: GO:0030281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of cutaneous epidermal structures such as hairs, scales, or feathers.","definition_xrefs":["ISBN:0878932437","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of cutaneous appendage","termid":"GO:0030281"}


id: PBO:0067150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 200, pseudogene","termid":"PBO:0067150"}


id: PBO:0089737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protease cofactor Nxt3","termid":"PBO:0089737"}


id: MONDO:0014943
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86703],"is_not":false,"summary":null,"term":"MONDO:0014943"}]},"cv_name":"mondo","definition":"Any mitochondrial DNA depletion syndrome in which the cause of the disease is a mutation in the TFAM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 15 (hepatocerebral type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934657","UMLS:C4310690","DOID:0080337","OMIM:617156"],"synonyms":[{"name":"MTDPS15","type":"related"},{"name":"TFAM mitochondrial DNA depletion syndrome","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 15 (hepatocerebral type)","type":"exact"},{"name":"mitochondrial DNA depletion syndrome caused by mutation in TFAM","type":"exact"}],"termid":"MONDO:0014943","terms_by_termid":{"MONDO:0014943":null},"xrefs":{"Monarch":{"xref_id":"0014943"}}}


id: PBO:0054239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1621","termid":"PBO:0054239"}


id: MONDO:0007961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephaly","termid":"MONDO:0016608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megalencephaly, autosomal dominant","secondary_identifiers":["OMIM:155350","MEDGEN:812057","UMLS:C3805727"],"synonyms":[{"name":"megalencephaly, autosomal dominant","type":"exact"}],"termid":"MONDO:0007961","xrefs":{"Monarch":{"xref_id":"0007961"}}}


id: PBO:0090081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic aminotransferase","termid":"PBO:0090081"}


id: FYPO:0007408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is abnormal at sites encoding polyadenylation signals.","definition_xrefs":["PMID:32499400","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to chromatin at polyadenylation site","synonyms":[{"name":"abnormal protein localisation to chromatin at polyadenylation site","type":"exact"},{"name":"abnormal protein localization to chromatin at poly(A) site","type":"exact"},{"name":"abnormal protein localization to chromatin at polyadenylation site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to chromatin at polyadenylation site during vegetative growth","type":"exact"}],"termid":"FYPO:0007408"}


id: PBO:0109126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basonuclin zinc finger protein 2","termid":"PBO:0109126"}


id: GO:0044654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: starch + H2O = alpha-D-glucose.","definition_xrefs":["PMID:18556189"],"gene_count":0,"genotype_count":0,"name":"obsolete starch alpha-glucosidase activity (obsolete GO:0044654)","termid":"GO:0044654"}


id: PBO:0050805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huntingtin","termid":"PBO:0050805"}


id: MONDO:0016177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic inflammatory disease associated with an acquired peripheral neuropathy (obsolete MONDO:0016177)","secondary_identifiers":["Orphanet:209007"],"termid":"MONDO:0016177","xrefs":{"Monarch":{"xref_id":"0016177"}}}


id: MONDO:0002794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma arising from the brain, occurring in adults.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult cerebellar neoplasm","termid":"MONDO:0003260"},{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult medulloblastoma","secondary_identifiers":["NCIT:C4011","UMLS:C0278876","MEDGEN:78898","DOID:3864","NANDO:2200090"],"synonyms":[{"name":"adult brain medulloblastoma","type":"exact"},{"name":"medulloblastoma","type":"broad"},{"name":"medulloblastoma of adults","type":"exact"}],"termid":"MONDO:0002794","xrefs":{"Monarch":{"xref_id":"0002794"}}}


id: PBO:0003507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1769 family protein","termid":"PBO:0003507"}


id: PBO:0039447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and kinase domain containing 1","termid":"PBO:0039447"}


id: PBO:0052759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 51","termid":"PBO:0052759"}


id: GO:0044800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The membrane organization process that joins two lipid bilayers to form a single membrane, involving more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism membrane fusion (obsolete GO:0044800)","termid":"GO:0044800"}


id: MONDO:0032653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac-urogenital syndrome","secondary_identifiers":["Orphanet:647811","UMLS:C4748946","OMIM:618280","MEDGEN:1648333"],"synonyms":[{"name":"CARDIAC-UROGENITAL SYNDROME","type":"exact"},{"name":"CUGS","type":"exact"}],"termid":"MONDO:0032653","xrefs":{"Monarch":{"xref_id":"0032653"}}}


id: GO:0005656
data:
  {"annotated_genes":["SJAG_01354","SJAG_02348","SJAG_02607","SJAG_02800","SJAG_01267","SJAG_01762","SJAG_04062","SJAG_00857","SJAG_00884","SJAG_03927","SJAG_02074","SJAG_02394","SJAG_04210","SJAG_05301","SJAG_03451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88299,91464,96826,102801,105889,106709,107297,107511,109674,110009,110835,111091,112616,114546,114715],"is_not":false,"summary":null,"term":"GO:0005656"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex assembled at eukaryotic DNA replication origins during late mitosis and G1, allowing the origin to become competent, or 'licensed', for replication. The complex normally includes the origin recognition complex (ORC), Cdc6, Cdt1 and the MiniChromosome Maintenance (Mcm2-7) proteins.","definition_xrefs":["PMID:15222894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex","termid":"GO:0036387"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02074":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_04062":null,"SJAG_04210":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005654"],"is_obsolete":false,"name":"nuclear pre-replicative complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eukaryotic pre-replicative complex","type":"exact"},{"name":"pre-RC","type":"related"},{"name":"pre-replicative complex","type":"broad"}],"termid":"GO:0005656","terms_by_termid":{"GO:0005656":null}}


id: GO:0035249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of glutamate from a presynapse, across a chemical synapse, the subsequent activation of glutamate receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission, glutamatergic","synonyms":[{"name":"glutamatergic synaptic transmission","type":"exact"}],"termid":"GO:0035249"}


id: PBO:0074309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD1 antisense RNA 2","termid":"PBO:0074309"}


id: GO:0031632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031630"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle membrane organization","termid":"GO:1901634"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle fusion to presynaptic active zone membrane","synonyms":[{"name":"activation of synaptic vesicle fusion to presynaptic membrane","type":"narrow"},{"name":"negative regulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"},{"name":"positive regulation of synaptic vesicle fusion to pre-synaptic membrane","type":"exact"},{"name":"stimulation of synaptic vesicle fusion to presynaptic membrane","type":"narrow"},{"name":"up regulation of synaptic vesicle fusion to presynaptic active zone membrane","type":"exact"},{"name":"up regulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"},{"name":"up-regulation of synaptic vesicle fusion to presynaptic active zone membrane","type":"exact"},{"name":"up-regulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"},{"name":"upregulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"}],"termid":"GO:0031632"}


id: MONDO:0019369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complex regional pain syndrome (CRPS) is a rare neurologic disease painful progressive condition that corresponds to a group of disorders characterized by a disproportionate spontaneous or stimulus-induced pain, accompanied by a variably mixed myriad of autonomic and motor disorders including symptoms such as swelling, allodynia, skin blood supply and trophic disturbances. CRPS most often affects one of the arms, legs, hands, or feet and usually occurs after an injury or trauma to that limb.","definition_xrefs":["Orphanet:83452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic pain syndrome","termid":"MONDO:0024317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex regional pain syndrome","secondary_identifiers":["EFO:1001998","NORD:1652","icd11.foundation:1834504950","MedDRA:10064332","MEDGEN:96846","MESH:D020918","SCTID:128200000","GARD:4647","UMLS:C0458219","DOID:3223"],"synonyms":[{"name":"CRPS","type":"related"},{"name":"Complex regional pain syndromes","type":"exact"},{"name":"reflex sympathetic dystrophy","type":"related"}],"termid":"MONDO:0019369","xrefs":{"Monarch":{"xref_id":"0019369"}}}


id: PATO:0001541
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amylose composition quality inhering in an bearer by virtue of the bearer's having high amount of amylose content.","definition_xrefs":["TO:TO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylose composition","termid":"PATO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-glutinous","termid":"PATO:0001541"}


id: PBO:0061526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal vesicle trafficking associated 2","termid":"PBO:0061526"}


id: PBO:0049647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 1","termid":"PBO:0049647"}


id: GO:1905853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of heparan sulfate binding.","definition_xrefs":["PMID:7683668","GOC:aruk","GOC:TermGenie","GOC:bc","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heparan sulfate binding (obsolete GO:1905853)","termid":"GO:1905853"}


id: MONDO:0014995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, seizures, and absent language","secondary_identifiers":["OMIM:617268","MEDGEN:934610","UMLS:C4310643"],"synonyms":[{"name":"NDHSAL","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia, seizures, and absent language","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia, seizures, and absent language; NDHSAL","type":"exact"}],"termid":"MONDO:0014995","xrefs":{"Monarch":{"xref_id":"0014995"}}}


id: PBO:0054543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1943","termid":"PBO:0054543"}


id: SO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000308 sequence_feature_locating_method (obsolete SO:0000308)","termid":"SO:0000308"}


id: GO:0050627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + mycothiol = NAD(P)H + H+ + mycothione.","definition_xrefs":["MetaCyc:1.8.1.15-RXN","EC:1.8.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"mycothione reductase activity","synonyms":[{"name":"mycothiol-disulfide reductase activity","type":"related"},{"name":"mycothiol:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050627"}


id: GO:0072132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesenchymal tissue are generated and organized. A mesenchymal tissue is made up of loosely packed stellate cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme morphogenesis","termid":"GO:0072132"}


id: PBO:0055893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 14","termid":"PBO:0055893"}


id: PBO:0108608
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_detail","termid":"PBO:0108608"}


id: PBO:0069771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1054, pseudogene","termid":"PBO:0069771"}


id: PBO:0060018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 6","termid":"PBO:0060018"}


id: PBO:0043606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen like tail subunit of asymmetric acetylcholinesterase","termid":"PBO:0043606"}


id: SO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A reversal in the direction of the backbone of a protein that is stabilized by hydrogen bond between backbone NH and CO groups, involving no more than 4 amino acid residues.","definition_xrefs":["EBIBS:GAR","uniprot:feature_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_turn_motif","secondary_identifiers":["BS:00148"],"synonyms":[{"name":"turn","type":"related"}],"termid":"SO:0001128"}


id: PBO:0053067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte transmembrane adaptor 1","termid":"PBO:0053067"}


id: PBO:0005301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy and CVT pathway serine/threonine protein kinase Atg1","termid":"PBO:0005301"}


id: PBO:0054464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1863","termid":"PBO:0054464"}


id: PBO:0082873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortical ER protein involved in ER-plasma membrane tethering; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to the plasma membrane (PM) and regulate PM phosphatidylinositol-4-phosphate (PI4P) levels by controlling access of Sac1p phosphatase to its substrate PI4P in the PM; localized to the bud via specific mRNA transport; non-tagged protein detected in a phosphorylated state in mitochondria; C-termini of Tcb1p, Tcb2p and Tcb3p interact","termid":"PBO:0082873"}


id: PBO:0114502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A) RNA binding protein involved in nuclear mRNA export; component of the nuclear pore and nuclear RNA export factor; ubiquitin-associated (UBA) domain interacts with Mip6p; ortholog of human TAP","termid":"PBO:0114502"}


id: PR:P87132
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC167.05 gene.","definition_xrefs":["UniProtKB:P87132","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C167.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.05","synonyms":[{"name":"Spom972h-SPAC167.05","type":"exact"}],"termid":"PR:P87132"}


id: PBO:0003017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 6","termid":"PBO:0003017"}


id: PBO:0059159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPPED2 antisense RNA 1","termid":"PBO:0059159"}


id: PBO:0063268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 14","termid":"PBO:0063268"}


id: GO:1990092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The calcium-dependent hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.","definition_xrefs":["PMID:20460380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self proteolysis","termid":"GO:0097264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"calcium-dependent self proteolysis","termid":"GO:1990092"}


id: SO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variation that expands or contracts a tandem repeat with regard to a reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_alteration","termid":"SO:0000248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short_tandem_repeat_variation","synonyms":[{"name":"short tandem repeat variation","type":"exact"},{"name":"str variation","type":"exact"}],"termid":"SO:0002096"}


id: GO:0010271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of chlorophyll.","definition_xrefs":["PMID:16361392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll metabolic process","termid":"GO:0090056"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole catabolic process","termid":"GO:1901404"},{"relation_name":"regulates","term_name":"chlorophyll catabolic process","termid":"GO:0015996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"regulation of chlorophyll catabolic process","termid":"GO:0010271"}


id: GO:0098026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The internal tube of the tail of some viruses. The virus tail tube is the channel for DNA ejection into the host cytoplasm.","definition_xrefs":["VZ:3960","PMID:33188213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, tube","synonyms":[{"name":"bacteriophage tail tube","type":"narrow"}],"termid":"GO:0098026"}


id: PBO:0003291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric-chelate reductase Frp2 (predicted)","termid":"PBO:0003291"}


id: GO:1901744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-deoxystreptamine.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"2-deoxystreptamine metabolic process","termid":"GO:1901742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-deoxystreptamine biosynthetic process","synonyms":[{"name":"2-deoxystreptamine anabolism","type":"exact"},{"name":"2-deoxystreptamine biosynthesis","type":"exact"},{"name":"2-deoxystreptamine formation","type":"exact"},{"name":"2-deoxystreptamine synthesis","type":"exact"}],"termid":"GO:1901744"}


id: GO:0042250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of an established polarized embryonic epithelial sheet.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of embryonic epithelium","termid":"GO:0016332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of polarity of embryonic epithelium","termid":"GO:0042250"}


id: MONDO:0700099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099","xrefs":{"Monarch":{"xref_id":"0700099"}}}


id: MONDO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the radial nerve. Clinical features include weakness of elbow extension, elbow flexion, supination of the forearm, wrist and finger extension, and thumb abduction. Sensation may be impaired over regions of the dorsal forearm. Common sites of compression or traumatic injury include the axilla and radial groove of the humerus.","definition_xrefs":["MESH:D020425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"radial neuropathy","secondary_identifiers":["SCTID:16644004","DOID:12171","MEDGEN:148185","UMLS:C0748226"],"synonyms":[{"name":"peripheral neuropathy of radial nerve","type":"exact"},{"name":"radial nerve peripheral neuropathy","type":"exact"}],"termid":"MONDO:0001459","xrefs":{"Monarch":{"xref_id":"0001459"}}}


id: PBO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom20 (predicted)","termid":"PBO:0000906"}


id: GO:0004456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-D-gluconate = 2-dehydro-3-deoxy-6-phospho-D-gluconate + H2O.","definition_xrefs":["EC:4.2.1.12","RHEA:17277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphogluconate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02036","MetaCyc:PGLUCONDEHYDRAT-RXN"],"synonyms":[{"name":"6-phospho-D-gluconate hydro-lyase (2-dehydro-3-deoxy-6-phospho-D-gluconate-forming)","type":"related"},{"name":"6-phospho-D-gluconate hydro-lyase activity","type":"related"},{"name":"6-phosphogluconate dehydrase activity","type":"related"},{"name":"6-phosphogluconate dehydratase activity","type":"related"},{"name":"6-phosphogluconic dehydrase activity","type":"related"},{"name":"gluconate 6-phosphate dehydratase activity","type":"related"},{"name":"gluconate-6-phosphate dehydratase activity","type":"related"}],"termid":"GO:0004456"}


id: MONDO:1011130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic rhinitis, non-human animal","termid":"MONDO:1010284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allergic rhinitis, cattle","secondary_identifiers":["OMIA:000027-9913"],"termid":"MONDO:1011130","xrefs":{"Monarch":{"xref_id":"1011130"}}}


id: MONDO:0971124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"perifoveal exudative vascular anomalous complex","secondary_identifiers":["Orphanet:674930"],"termid":"MONDO:0971124","xrefs":{"Monarch":{"xref_id":"0971124"}}}


id: PBO:0017462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part_that_occurs_in","termid":"PBO:0017462"}


id: MONDO:0006059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the nasal cavity mucosa. Signs and symptoms include nasal fullness and obstruction, pain, epistaxis, and the presence of a nasal mass.","definition_xrefs":["NCIT:C8192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity carcinoma","termid":"MONDO:0003212"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity squamous cell carcinoma","secondary_identifiers":["EFO:1000057","MEDGEN:79104","DOID:5515","UMLS:C0280333"],"synonyms":[{"name":"nasal cavity squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of nasal cavity","type":"exact"},{"name":"squamous cell carcinoma of the nasal cavity","type":"exact"}],"termid":"MONDO:0006059","xrefs":{"Monarch":{"xref_id":"0006059"}}}


id: MONDO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"superficial keratitis","secondary_identifiers":["SCTID:27019000","UMLS:C0155074","DOID:12196","MEDGEN:509771","ICD9:370.20"],"termid":"MONDO:0001465","xrefs":{"Monarch":{"xref_id":"0001465"}}}


id: _global:promoter_of
data:
  {"annotation_feature_type":"gene","cv_name":"SO_feature_relations","definition":"Relation between a promoter and a gene.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_of","termid":"_global:promoter_of"}


id: GO:0047397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl beta-D-glucosyl phosphate + H2O = dolichol-phosphate + beta-D-glucose.","definition_xrefs":["MetaCyc:3.1.4.48-RXN","EC:3.1.4.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"dolichylphosphate-glucose phosphodiesterase activity","secondary_identifiers":["RHEA:13857"],"synonyms":[{"name":"Dol-P-Glc phosphodiesterase activity","type":"related"},{"name":"dolichol phosphoglucose phosphodiesterase activity","type":"related"},{"name":"dolichyl-beta-D-glucosyl-phosphate dolichylphosphohydrolase activity","type":"related"},{"name":"dolichyl-phosphate-glucose phosphodiesterase activity","type":"exact"}],"termid":"GO:0047397"}


id: PBO:0054433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1829","termid":"PBO:0054433"}


id: GO:0036251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under salt stress. The stress is usually an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to salt stress (obsolete GO:0036251)","termid":"GO:0036251"}


id: FYPO:0003155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cells grow from one end, and do not grow continuously, but instead oscillate between periods of growth and pauses during which no growth occurs.","definition_xrefs":["PomBase:mah","PMID:24146635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell growth","termid":"FYPO:0003154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"intermittent monopolar cell growth","synonyms":[{"name":"intermittent monopolar vegetative cell growth","type":"exact"}],"termid":"FYPO:0003155"}


id: FYPO:0003370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium fluoride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on sodium fluoride","synonyms":[{"name":"normal cell population growth in presence of sodium fluoride","type":"exact"},{"name":"normal cell population growth on sodium fluoride","type":"exact"},{"name":"normal cellular response to sodium fluoride","type":"related"},{"name":"normal growth on NaF","type":"exact"},{"name":"normal vegetative cell population growth on sodium fluoride","type":"exact"}],"termid":"FYPO:0003370"}


id: PBO:0031244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_by_small_RNA","termid":"PBO:0031244"}


id: PBO:0016947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mde1","termid":"PBO:0016947"}


id: MONDO:0030846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 48","secondary_identifiers":["DOID:0112176","OMIM:619108","MEDGEN:1761843","UMLS:C5436823","GARD:16420"],"synonyms":[{"name":"SPGF48","type":"exact"},{"name":"spermatogenic failure 48","type":"exact"}],"termid":"MONDO:0030846","xrefs":{"Monarch":{"xref_id":"0030846"}}}


id: GO:1990181
data:
  {"annotated_genes":["SJAG_01139"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116493],"is_not":false,"summary":null,"term":"GO:1990181"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetyl-CoA from pantothenate via phosphopantothenate and CoA.","definition_xrefs":["GOC:mah","PMID:23091701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA biosynthetic process","termid":"GO:0006085"},{"relation_name":"is_a","term_name":"pantothenate metabolic process","termid":"GO:0015939"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01139":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0006790","GO:0006766"],"is_obsolete":false,"name":"acetyl-CoA biosynthetic process from pantothenate","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acetyl-CoA anabolism from pantothenate","type":"exact"},{"name":"acetyl-CoA formation from pantothenate","type":"related"},{"name":"acetyl-CoA synthesis from pantothenate","type":"related"}],"termid":"GO:1990181","terms_by_termid":{"GO:1990181":null}}


id: PBO:0113121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-resident glycoprotein involved in high-pressure tolerance; proposed role promoting proper folding of nutrient permeases in the ER during hydrostatic pressure stress; contains two transmembrane domains, a C-terminal cytoplasmic domain and a luminal region containing 12 N-linked glycans; null mutant is synthetically sick with cdc13-1; SWAT-GFP and mCherry fusion proteins localize to the vacuole while SWAT-GFP fusion also localizes to the endoplasmic reticulum","termid":"PBO:0113121"}


id: MONDO:0012489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CRYBA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 23","secondary_identifiers":["DOID:0110271","OMIM:610425","MEDGEN:814342","UMLS:C3808012"],"synonyms":[{"name":"CRYBA4 early-onset non-syndromic cataract","type":"exact"},{"name":"CTRCT23","type":"exact"},{"name":"cataract 23","type":"exact"},{"name":"cataract 23, lamellar","type":"related"},{"name":"cataract 23, multiple types","type":"related"},{"name":"cataract 23, multiple types, with or without microcornea","type":"related"},{"name":"cataract type 23","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in CRYBA4","type":"exact"},{"name":"lamellar cataract 23","type":"exact"}],"termid":"MONDO:0012489","xrefs":{"Monarch":{"xref_id":"0012489"}}}


id: PBO:0089483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein","termid":"PBO:0089483"}


id: GO:0046972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 16) = CoA + histone H4 N6-acetyl-L-lysine (position 16). This reaction represents the addition of an acetyl group to the lysine at position 16 of histone H4.","definition_xrefs":["PMID:19056256","PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0034212","GO:0016746","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"histone H4K16 acetyltransferase activity","synonyms":[{"name":"histone acetylase activity (H4-K16 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K16 specific)","type":"exact"},{"name":"histone lysine acetyltransferase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0046972"}


id: GO:0060798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands and ultimately resulting in the specification of a mesodermal fate.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in mesodermal cell fate specification (obsolete GO:0060798)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in mesodermal cell fate specification","type":"exact"}],"termid":"GO:0060798"}


id: GO:0045707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination in an adult organism.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of salivary gland boundary specification","termid":"GO:0045704"},{"relation_name":"regulates","term_name":"adult salivary gland boundary specification","termid":"GO:0007434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adult salivary gland boundary specification","synonyms":[{"name":"regulation of adult salivary gland determination","type":"exact"}],"termid":"GO:0045707"}


id: GO:0015149
data:
  {"annotated_genes":["SJAG_00057","SJAG_03608","SJAG_03820"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102470],"is_not":false,"summary":null,"term":"GO:0015149"},{"annotations":[110100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005354"},{"annotations":[113620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[116653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a hexose sugar, a monosaccharide with 6 carbon atoms, from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"hexose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5638222","Reactome:R-HSA-189242"],"termid":"GO:0015149","terms_by_termid":{"GO:0005354":null,"GO:0005358":null,"GO:0015149":null,"GO:0140108":null}}


id: GO:1901618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of organic hydroxy compound from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic hydroxy compound transmembrane transporter activity (obsolete GO:1901618)","termid":"GO:1901618"}


id: GO:0051677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pullulan, a neutral linear polysaccharide composed of repeating units of maltotriose joined by alpha-(1,6)-linkages.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"pullulan metabolic process","termid":"GO:0051676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pullulan biosynthetic process","termid":"GO:0051677"}


id: GO:0043482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of coloring matter in a particular location in a cell, occurring in response to some external stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular pigmentation","termid":"GO:0033059"},{"relation_name":"is_a","term_name":"pigment accumulation","termid":"GO:0043476"},{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular pigment accumulation","termid":"GO:0043482"}


id: PBO:0048161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 6","termid":"PBO:0048161"}


id: PR:Q9P7D9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsv1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7D9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein rsv1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.09","synonyms":[{"name":"Spom972h-rsv1","type":"exact"},{"name":"required for stationary phase viability protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7D9"}


id: MONDO:0003288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of leiomyoma characterized by the presence of pleomorphic muscle cells with bizarre hyperchromatic nuclei and eosinophilic cytoplasm.","definition_xrefs":["NCIT:C4257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bizarre leiomyoma","secondary_identifiers":["UMLS:C0334478","DOID:5127","ICDO:8893/0","MEDGEN:90789"],"synonyms":[{"name":"Symplastic leiomyoma","type":"exact"},{"name":"atypical leiomyoma","type":"exact"},{"name":"bizarre leiomyoma","type":"exact"},{"name":"pleomorphic leiomyoma","type":"exact"}],"termid":"MONDO:0003288","xrefs":{"Monarch":{"xref_id":"0003288"}}}


id: MONDO:0009144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ebstein's malformation is a rare congenital cardiac anomaly characterized by rotational displacement of the septal and inferior leaflets of the tricuspid valve such that they are hinged within the right ventricle, rather than as expected at the atrioventricular junction.","definition_xrefs":["Orphanet:1880"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic cardiac malformation (obsolete MONDO:0018797)","termid":"MONDO:0018797"},{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Ebstein anomaly","secondary_identifiers":["MedDRA:10014075","NCIT:C84681","EFO:0007244","GARD:6313","NANDO:2200260","UMLS:C0013481","MEDGEN:4435","NANDO:2100080","MESH:D004437","DOID:14289","icd11.foundation:307157712","ICD9:746.2","NANDO:1200711","OMIM:224700"],"synonyms":[{"name":"Ebstein anomaly","type":"exact"},{"name":"Ebstein anomaly (disease)","type":"exact"},{"name":"Ebstein anomaly of the tricuspid valve","type":"exact"},{"name":"Ebstein malformation","type":"related"},{"name":"Ebstein's anomaly","type":"exact"},{"name":"Ebstein's anomaly (disorder) [ambiguous]","type":"exact"},{"name":"Ebstein's anomaly of common atrioventricular valve","type":"exact"},{"name":"Ebstein's anomaly of right atrioventricular valve","type":"exact"},{"name":"Ebstein's anomaly of tricuspid valve","type":"exact"},{"name":"Ebstein's malformation","type":"related"}],"termid":"MONDO:0009144","xrefs":{"Monarch":{"xref_id":"0009144"}}}


id: GO:0003818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the inactivation of complement subcomponents C3b, iC3b and C4b by proteolytic cleavage.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement factor I activity (obsolete GO:0003818)","synonyms":[{"name":"C3b inactivator activity","type":"narrow"},{"name":"C3b/C4b inactivator activity","type":"related"},{"name":"C3bINA","type":"related"},{"name":"complement C3b inactivator","type":"related"},{"name":"complement C3b/C4b inactivator","type":"related"},{"name":"complement C4b inactivator","type":"related"},{"name":"complement C4bi","type":"related"},{"name":"complement component C3b inactivator activity","type":"related"},{"name":"complement factor I activity","type":"exact"},{"name":"conglutinogen-activating factor C","type":"related"},{"name":"factor I","type":"related"}],"termid":"GO:0003818"}


id: PBO:0084749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial malic enzyme; catalyzes the oxidative decarboxylation of malate to pyruvate, which is a key intermediate in sugar metabolism and a precursor for synthesis of several amino acids","termid":"PBO:0084749"}


id: PBO:0090967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-adenosyl)-triphosphatase Nit1","termid":"PBO:0090967"}


id: GO:0046471
data:
  {"annotated_genes":["SJAG_03563","SJAG_04323","SJAG_04317","SJAG_03700","SJAG_00168"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035965"},{"annotations":[105676,92545,112461,117289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidylglycerols, any of a class of phospholipids in which the phosphatidyl group is esterified to the hydroxyl group of glycerol. They are important constituents of cell membranes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_03563":null,"SJAG_03700":null,"SJAG_04317":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylglycerol metabolism","type":"exact"}],"termid":"GO:0046471","terms_by_termid":{"GO:0032049":null,"GO:0035965":null}}


id: GO:0034012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FAD = AMP + H+ + riboflavin cyclic-4',5'-phosphate.","definition_xrefs":["RHEA:13729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0009975","GO:0016829"],"is_obsolete":false,"name":"FAD-AMP lyase (cyclizing) activity","secondary_identifiers":["EC:4.6.1.15"],"synonyms":[{"name":"FAD AMP-lyase (cyclic-FMN-forming) activity","type":"related"},{"name":"FAD AMP-lyase (riboflavin-cyclic-4',5'-phosphate-forming) activity","type":"related"},{"name":"FMN cyclase activity","type":"related"}],"termid":"GO:0034012"}


id: GO:1905661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of telomerase RNA reverse transcriptase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:22633954","GO_REF:0000059","GOC:BHF_telomere","GOC:nc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of telomerase RNA reverse transcriptase activity (obsolete GO:1905661)","synonyms":[{"name":"regulation of telomerase, catalyst","type":"exact"}],"termid":"GO:1905661"}


id: PBO:0044586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-box binding PAR bZIP transcription factor","termid":"PBO:0044586"}


id: PBO:0049201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIK1 antisense RNA 2","termid":"PBO:0049201"}


id: GO:0018083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine or peptidyl-serine to peptidyl-L-3-oxoalanine; characteristic of the active sites of arylsulfatases.","definition_xrefs":["RESID:AA0185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-3-oxoalanine biosynthetic process from peptidyl-cysteine or peptidyl-serine","synonyms":[{"name":"peptidyl-L-3-oxoalanine anabolism from peptidyl-cysteine or peptidyl-serine","type":"exact"},{"name":"peptidyl-L-3-oxoalanine formation from peptidyl-cysteine or peptidyl-serine","type":"exact"},{"name":"peptidyl-L-3-oxoalanine synthesis from peptidyl-cysteine or peptidyl-serine","type":"exact"}],"termid":"GO:0018083"}


id: PR:O36033
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tetratricopeptide repeat protein 27 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02024","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat-containing protein C19B12.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.01","secondary_identifiers":["UniProtKB:O36033"],"synonyms":[{"name":"Spom972h-TTC27","type":"exact"}],"termid":"PR:O36033"}


id: GO:0001054
data:
  {"annotated_genes":["SJAG_00731","SJAG_01313","SJAG_04106","SJAG_02101","SJAG_03578","SJAG_04261","SJAG_01444","SJAG_03144","SJAG_01765","SJAG_02070"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89073,91546,93416,102176,102827,105265,110133,112585,113245,113659],"is_not":false,"summary":null,"term":"GO:0001054"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains an RNA polymerase I specific promoter to direct initiation and catalyzes DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed 5'-3' RNA polymerase activity","termid":"GO:0003899"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_03144":null,"SJAG_03578":null,"SJAG_04106":null,"SJAG_04261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase I activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase activity involved in transcription from RNA polymerase I promoter","type":"exact"}],"termid":"GO:0001054","terms_by_termid":{"GO:0001054":null}}


id: PBO:0081132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP3 divergent transcript","termid":"PBO:0081132"}


id: GO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress.","definition_xrefs":["GOC:add","PMID:12925704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane repair","termid":"GO:0001778"}


id: GO:0071966
data:
  {"annotated_genes":["SJAG_02916","SJAG_02222","SJAG_04184","SJAG_01835","SJAG_00610","SJAG_05285","SJAG_03646","SJAG_01453","SJAG_02192","SJAG_02278","SJAG_03057","SJAG_01290","SJAG_04327","SJAG_01288","SJAG_01171","SJAG_03123","SJAG_05001","SJAG_00876","SJAG_04864","SJAG_04666","SJAG_03587","SJAG_04483","SJAG_00218","SJAG_04771","SJAG_01028","SJAG_00424","SJAG_04236"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88209,106159],"is_not":false,"summary":null,"term":"GO:0071966"},{"annotations":[93969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[108759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[113822,88658,108533,117230,103655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[91105,105570,87584,107241,112606,91094,115263,108761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[102130,108073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[101434,107531,101435,94604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[105572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051278"},{"annotations":[91929,87036],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[88952,91935,94441,102335],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the polysaccharides which make up the fungal-type cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"part_of","term_name":"fungal-type cell wall organization or biogenesis","termid":"GO:0071852"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01028":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04327":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"fungal-type cell wall polysaccharide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071966","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0051278":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071966":null,"GO:0071970":null,"GO:0140748":null}}


id: MONDO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of rheumatic pericarditis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic pericarditis","termid":"MONDO:0024655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"chronic rheumatic pericarditis","secondary_identifiers":["icd11.foundation:1473004877","MEDGEN:510021","ICD10CM:I09.2","DOID:1869","SCTID:78069008","ICD9:393","UMLS:C0155561"],"synonyms":[{"name":"rheumatic pericarditis, chronic","type":"exact"}],"termid":"MONDO:0002133","xrefs":{"Monarch":{"xref_id":"0002133"}}}


id: GO:0032169
data:
  {"annotated_genes":["SJAG_01769","SJAG_00663","SJAG_03688","SJAG_04470"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94008,99607,105477,115413],"is_not":false,"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane at the site of cytokinesis in a prospore; composed of septins as well as septin-associated proteins.","definition_xrefs":["PMID:16151244","GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01769":null,"SJAG_03688":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"prospore septin ring","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032169","terms_by_termid":{"GO:0032169":null}}


id: MONDO:0005200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An dilated cardiomyopathy caused by infection with Viruses.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dilated cardiomyopathy","termid":"MONDO:0005021"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"viral dilated cardiomyopathy","secondary_identifiers":["MEDGEN:538852","UMLS:C0264797","EFO:0002629","SCTID:30496006","Wikipedia:Viral_cardiomyopathy"],"synonyms":[{"name":"Viruses caused dilated cardiomyopathy","type":"exact"},{"name":"Viruses dilated cardiomyopathy","type":"exact"}],"termid":"MONDO:0005200","xrefs":{"Monarch":{"xref_id":"0005200"}}}


id: PBO:0060073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 20","termid":"PBO:0060073"}


id: MONDO:0016371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial neuralgia","termid":"MONDO:0016374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"combined hyperactive dysfunction syndrome of the cranial nerves","secondary_identifiers":["UMLS:C5190851","GARD:20541","MEDGEN:1677292","icd11.foundation:457686735","Orphanet:221078"],"termid":"MONDO:0016371","xrefs":{"Monarch":{"xref_id":"0016371"}}}


id: PBO:0013109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP GTPase subunit Cwf10","termid":"PBO:0013109"}


id: MONDO:0001469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cascade stomach","secondary_identifiers":["MEDGEN:540460","DOID:12234","UMLS:C0267183","ICD9:537.6","SCTID:54051005"],"synonyms":[{"name":"hourglass stricture or stenosis of stomach","type":"exact"}],"termid":"MONDO:0001469","xrefs":{"Monarch":{"xref_id":"0001469"}}}


id: GO:0051118
data:
  {"annotated_genes":["SJAG_03444","SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88608,110769],"is_not":false,"summary":null,"term":"GO:0051118"}]},"cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->3)-alpha-D-glucosidic linkages in isolichenin, pseudonigeran and nigeran.","definition_xrefs":["EC:3.2.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02718":null,"SJAG_03444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"glucan endo-1,3-alpha-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.59-RXN"],"synonyms":[{"name":"1,3(1,3;1,4)-alpha-D-glucan 3-glucanohydrolase activity","type":"related"},{"name":"cariogenanase activity","type":"related"},{"name":"cariogenase activity","type":"related"},{"name":"endo-(1->3)-alpha-glucanase activity","type":"related"},{"name":"endo-1,3-alpha-D-glucanase activity","type":"related"},{"name":"endo-1,3-alpha-glucanase activity","type":"related"},{"name":"mutanase activity","type":"related"}],"termid":"GO:0051118","terms_by_termid":{"GO:0051118":null}}


id: PATO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility quality inhering in a bearer by virtue of the bearer's being incapable to move freely.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobility","termid":"PATO:0000004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immobile","synonyms":[{"name":"fixed","type":"related"}],"termid":"PATO:0000300"}


id: PBO:0002314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 3","termid":"PBO:0002314"}


id: PBO:0062028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily Q member 1 pseudogene","termid":"PBO:0062028"}


id: PBO:0031761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_in_mitotic_G2_phase","termid":"PBO:0031761"}


id: PBO:0056521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound transcription factor peptidase, site 1","termid":"PBO:0056521"}


id: PBO:0016950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Slt1","termid":"PBO:0016950"}


id: GO:0044155
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small pit, depression, or invagination, such as any of the minute pits or incuppings of the host cell membrane formed during pinocytosis, that communicates with the outside of a host cell and extends inward, indenting the host cytoplasm and the host cell membrane. Such caveolae may be pinched off to form free vesicles within the host cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host caveola","termid":"GO:0044155"}


id: FYPO:0002655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more exocytic vesicles than normal, and the vesicles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"},{"relation_name":"has_part","term_name":"enlarged exocytic vesicles","termid":"FYPO:0002654"},{"relation_name":"is_a","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"},{"relation_name":"is_a","term_name":"enlarged exocytic vesicles","termid":"FYPO:0002654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"enlarged exocytic vesicles present in increased numbers","synonyms":[{"name":"accumulation of enlarged exocytic vesicles","type":"related"},{"name":"additional enlarged exocytic vesicles present","type":"exact"},{"name":"enlarged exocytic vesicles present in greater numbers","type":"exact"},{"name":"enlarged exocytic vesicles present in increased numbers during mitotic cell cycle","type":"related"},{"name":"enlarged exocytic vesicles present in increased numbers during vegetative growth","type":"exact"},{"name":"enlarged exocytotic vesicles present in increased numbers","type":"exact"},{"name":"enlarged post-Golgi secretory vesicles present in increased numbers","type":"related"},{"name":"extra enlarged exocytic vesicles","type":"exact"}],"termid":"FYPO:0002655"}


id: FYPO:0000344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"enlarged nucleus","termid":"FYPO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002403"],"is_obsolete":false,"name":"enlarged nucleus during vegetative growth","synonyms":[{"name":"enlarged nuclei during vegetative growth","type":"exact"},{"name":"enlarged nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000344"}


id: GO:0005277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of acetylcholine from one side of a membrane to the other. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transmembrane transporter activity","termid":"GO:0005326"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"acetate ester transmembrane transporter activity","termid":"GO:1901375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"acetylcholine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-264615"],"termid":"GO:0005277"}


id: PBO:0072804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescence associated long non-coding RNA 3","termid":"PBO:0072804"}


id: FYECO:0000006
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[118868,118768,118765,118766,118767,118866,118771,118747,118748,118749,118763,118878,118867],"is_not":false,"summary":null,"term":"FYECO:0000006"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was performed, or cells were grown, at a low temperature (typically lower than ~25 degrees Celsius).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01946":null,"SJAG_01956":null,"SJAG_03048":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_05207":null},"genotype_count":10,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"cem1delta":{"display_name":"cem1delta","display_uniquename":"cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-51(Y189D cold sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"oar2delta":{"display_name":"oar2delta","display_uniquename":"oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"low temperature","references_by_uniquename":{"PMID:23786411":null,"PMID:25318672":null,"PMID:30664646":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01946","SJAG_01956","SJAG_03198","SJAG_03575","SJAG_00426","SJAG_03048","SJAG_05207"],"single_locus_genotype_uniquenames":["oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","oar2delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","cem1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"17 degrees Celsius","type":"narrow"},{"name":"18 degrees Celsius","type":"narrow"},{"name":"19 degrees Celsius","type":"narrow"},{"name":"20 degrees Celsius","type":"narrow"},{"name":"21 degrees Celsius","type":"narrow"},{"name":"22 degrees Celsius","type":"narrow"},{"name":"23 degrees Celsius","type":"narrow"},{"name":"24 degrees Celsius","type":"narrow"},{"name":"cold","type":"related"}],"termid":"FYECO:0000006","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO_EXT:0000001":null}}


id: PBO:0053230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing G protein-coupled receptor 6","termid":"PBO:0053230"}


id: GO:0008354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell specialized to produce haploid gametes through the embryo from its site of production to the place where the gonads will form.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell migration","synonyms":[{"name":"germ-cell migration","type":"exact"},{"name":"pole cell migration","type":"narrow"},{"name":"primordial germ cell migration","type":"related"}],"termid":"GO:0008354"}


id: PBO:0055620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3059","termid":"PBO:0055620"}


id: GO:0008734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + O2 = iminosuccinate + H2O2. Can also use fumatate as electron acceptor under anaerobic conditions, yielding succinate.","definition_xrefs":["EC:1.4.3.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-aspartate oxidase activity","synonyms":[{"name":"L-aspartate:oxygen oxidoreductase","type":"related"}],"termid":"GO:0008734"}


id: FYPO:0000775
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[118845,118841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[118835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null},"genotype_count":4,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551","SJAG_01787"],"single_locus_genotype_uniquenames":["pck2delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck1delta"],"synonyms":[{"name":"abnormal protein phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000775","terms_by_termid":{"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null}}


id: PBO:0047036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 99 member A","termid":"PBO:0047036"}


id: PBO:0090531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Rossman fold DUF1776 family protein","termid":"PBO:0090531"}


id: MONDO:0013097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 8","secondary_identifiers":["UMLS:C2751637","MEDGEN:416601","OMIM:613033"],"synonyms":[{"name":"GLM8","type":"exact"},{"name":"glioma susceptibility 8","type":"exact"}],"termid":"MONDO:0013097","xrefs":{"Monarch":{"xref_id":"0013097"}}}


id: MONDO:0002272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A laboratory test result indicating abnormally high proliferation of gamma globulins in the blood originating from multiple cell lines.","definition_xrefs":["NCIT:C35885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma protein metabolism disease","termid":"MONDO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"polyclonal hypergammaglobulinemia","secondary_identifiers":["SCTID:190808009","UMLS:C0154254","ICD10CM:D89.0","DOID:2344","ICD9:273.0","MEDGEN:56337"],"synonyms":[{"name":"polyclonal hypergammaglobulinemia","type":"exact"}],"termid":"MONDO:0002272","xrefs":{"Monarch":{"xref_id":"0002272"}}}


id: GO:0061716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a processed miRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:BHF","PMID:15738428","PMID:21554756","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"is_a","term_name":"miRNA transport","termid":"GO:1990428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0051179","GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"miRNA export from nucleus","termid":"GO:0061716"}


id: PBO:0075764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 3","termid":"PBO:0075764"}


id: GO:0061323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}


id: PBO:0004151
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xeroderma pigmentosum","termid":"PBO:0004151"}


id: PBO:0072420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 25","termid":"PBO:0072420"}


id: PBO:0089816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Ppk26","termid":"PBO:0089816"}


id: GO:1900288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"regulates","term_name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:0052799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"regulation of coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:1900288"}


id: PBO:0059678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 44","termid":"PBO:0059678"}


id: GO:1902707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to ethanol.","definition_xrefs":["GO_REF:0000093","PMID:19539744","PMID:18727018","GOC:mengo_curators","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to ethanol (obsolete GO:1902707)","synonyms":[{"name":"hexose breakdown to ethanol","type":"exact"},{"name":"hexose catabolism to ethanol","type":"exact"},{"name":"hexose degradation to ethanol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902707"}


id: PBO:0071353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 12","termid":"PBO:0071353"}


id: PBO:0069779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1064, pseudogene","termid":"PBO:0069779"}


id: PATO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a cone (a 3-D shape with a round cross section that tapers).","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Cone_(geometry)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conical","secondary_identifiers":["Image:http\\://upload.wikimedia.org/wikipedia/commons/d/d2/Cone_3d.png"],"synonyms":[{"name":"cone-shaped","type":"exact"}],"termid":"PATO:0002021"}


id: PBO:0042126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 200","termid":"PBO:0042126"}


id: FYPO:0007262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, morphology, or other physical characteristic of the eisosome is abnormal. The eisosome consists of a furrow-like plasma membrane sub-domain and associated integral transmembrane proteins, and the proteins (eisosome filaments) that form a scaffolding lattice on the cytoplasmic face.","definition_xrefs":["PomBase:mah","GO:0032126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal eisosome","synonyms":[{"name":"abnormal eisosome during mitotic cell cycle","type":"related"},{"name":"abnormal eisosome during vegetative growth","type":"exact"},{"name":"abnormal eisosomes","type":"exact"}],"termid":"FYPO:0007262"}


id: MONDO:0008164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 1","secondary_identifiers":["MEDGEN:1639517","UMLS:C4551901","DOID:0060920","OMIM:166800"],"synonyms":[{"name":"OTS","type":"related"},{"name":"OTSC1","type":"exact"},{"name":"otosclerosis 1","type":"exact"}],"termid":"MONDO:0008164","xrefs":{"Monarch":{"xref_id":"0008164"}}}


id: PBO:0081702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 623","termid":"PBO:0081702"}


id: PR:O59719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3B8.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.11","synonyms":[{"name":"Spom972h-rrn6","type":"exact"}],"termid":"PR:O59719"}


id: GO:1900801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cspyrone B1.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"cspyrone B1 metabolic process","termid":"GO:1900800"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"cspyrone B1 catabolic process","synonyms":[{"name":"cspyrone B1 breakdown","type":"exact"},{"name":"cspyrone B1 catabolism","type":"exact"},{"name":"cspyrone B1 degradation","type":"exact"}],"termid":"GO:1900801"}


id: GO:0047658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-amino acid ester + H2O = an alpha-amino acid + an alcohol.","definition_xrefs":["EC:3.1.1.43","MetaCyc:ALPHA-AMINO-ACID-ESTERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"alpha-amino-acid esterase activity","secondary_identifiers":["RHEA:17241","Reactome:R-HSA-6784959"],"synonyms":[{"name":"a-amino-acid esterase activity","type":"exact"},{"name":"alpha-amino acid ester hydrolase activity","type":"related"},{"name":"alpha-amino-acid ester hydrolase activity","type":"related"},{"name":"alpha-amino-acid-ester aminoacylhydrolase activity","type":"related"}],"termid":"GO:0047658"}


id: PBO:0113115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum protein of unknown function; deletion confers resistance to fluconazole and to osmotic stress","termid":"PBO:0113115"}


id: GO:0015822
data:
  {"annotated_genes":["SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"}]},"cv_name":"biological_process","definition":"The directed movement of ornithine, 2,5-diaminopentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ornithine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-ornithine transport","type":"narrow"}],"termid":"GO:0015822","terms_by_termid":{"GO:1990575":null}}


id: GO:0015203
data:
  {"annotated_genes":["SJAG_02060","SJAG_02344","SJAG_02125","SJAG_02059"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015489"},{"annotations":[106550,108913,110385,116792,108907,108901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015606"},{"annotations":[108914,109807,108902,108908,110386,116793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000297"}]},"cv_name":"molecular_function","definition":"Enables the transfer of polyamines, organic compounds containing two or more amino groups, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"polyamine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amine/amide/polyamine channel activity","type":"related"}],"termid":"GO:0015203","terms_by_termid":{"GO:0000297":null,"GO:0015489":null,"GO:0015606":null}}


id: PBO:0109625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 79 (pseudogene)","termid":"PBO:0109625"}


id: GO:0015573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-glucosides from one side of a membrane to the other. Beta-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in a beta configuration.","definition_xrefs":["PMID:7883710","GOC:jl","GOC:mtg_transport","ISBN:0815340729","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"beta-glucoside transmembrane transporter activity","secondary_identifiers":["GO:0015582"],"synonyms":[{"name":"beta-glucoside permease activity","type":"exact"}],"termid":"GO:0015573"}


id: PBO:0087969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transverse filament protein of the synaptonemal complex; required for normal levels of meiotic recombination and pairing between homologous chromosome during meiosis; required for meiotic recombination between non-allelc sites; potential Cdc28p substrate","termid":"PBO:0087969"}


id: PBO:0013123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, localizing to double strand breaks Dbl1","termid":"PBO:0013123"}


id: PBO:0057139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 219a-2","termid":"PBO:0057139"}


id: MONDO:0013407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the SAG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 47","secondary_identifiers":["UMLS:C3151061","MEDGEN:462411","DOID:0110369","GARD:15702","ICD10CM:H35.5","OMIM:613758"],"synonyms":[{"name":"RP47","type":"exact"},{"name":"SAG retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 47","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in SAG","type":"exact"},{"name":"retinitis pigmentosa type 47","type":"exact"}],"termid":"MONDO:0013407","xrefs":{"Monarch":{"xref_id":"0013407"}}}


id: PBO:0031679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cell_cycle_arrest_in_response_to_pheromone","termid":"PBO:0031679"}


id: GO:0005457
data:
  {"annotated_genes":["SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92844],"is_not":false,"summary":null,"term":"GO:0005457"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a GDP-fucose from one side of a membrane to the other. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide-sugar transmembrane transporter activity","termid":"GO:0036080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"GDP-fucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-742345","Reactome:R-HSA-5653596"],"termid":"GO:0005457","terms_by_termid":{"GO:0005457":null}}


id: PBO:0069034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 279, pseudogene","termid":"PBO:0069034"}


id: MONDO:0012609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with variation in the region 8p12-q22.","definition_xrefs":["PMID:16825432","DOID:0110045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"Alzheimer disease 12","secondary_identifiers":["MEDGEN:410013","OMIM:611073","MESH:C567022","GARD:16516","UMLS:C1970209"],"synonyms":[{"name":"AD12","type":"exact"},{"name":"Ad12","type":"related"},{"name":"Alzheimer disease 12","type":"exact"},{"name":"Alzheimer disease familial 12","type":"exact"},{"name":"Alzheimer disease type 12","type":"exact"},{"name":"Alzheimer disease, familial, 12","type":"related"},{"name":"Alzheimer's disease 12","type":"exact"},{"name":"Alzheimer's disease type 12","type":"exact"}],"termid":"MONDO:0012609","xrefs":{"Monarch":{"xref_id":"0012609"}}}


id: PBO:0039096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase like 2","termid":"PBO:0039096"}


id: MONDO:0007950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clonal myeloproliferative neoplasm characterized by the proliferation and accumulation of neoplastic mast cells in one or multiple organs or organ systems. It is a heterogeneous group of neoplasms, ranging from cutaneous proliferations which may regress spontaneously, to aggressive neoplasms associated with organ failure and short survival.","definition_xrefs":["NCIT:C84269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mast cell neoplasm","termid":"MONDO:0002724"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"mastocytosis","secondary_identifiers":["MEDGEN:9902","DOID:350","GARD:6987","ONCOTREE:MCD","MedDRA:10026891","NORD:1408","MESH:D008415","EFO:0009001","ICD10WHO:Q82.2","icd11.foundation:691643472","Orphanet:98292","UMLS:C0024899"],"synonyms":[{"name":"MAST cell disease","type":"related"},{"name":"Mast cell disease","type":"exact"},{"name":"mast cell hyperplasia","type":"exact"},{"name":"mastocytosis","type":"exact"},{"name":"urticaria pigmentosa","type":"related"}],"termid":"MONDO:0007950","xrefs":{"Monarch":{"xref_id":"0007950"}}}


id: PBO:0082067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-adenine DNA glycosylase; initiates base excision repair (BER) by removing damaged bases to create abasic sites that are subsequently repaired; expansion of BER repair removes alkylated bases resulting from alkylating agent-induced DNA damage, compensating for the lack of DNA repair by oxidative dealkylation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082067"}


id: GO:0000270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptidoglycans, any of a class of glycoconjugates found only in bacterial cell walls and consisting of strands of glycosaminoglycan cross-linked by oligopeptides to form a huge and rigid network.","definition_xrefs":["ISBN:0198506732","PMID:33139480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidoglycan metabolic process","secondary_identifiers":["GO:0009284"],"synonyms":[{"name":"murein metabolic process","type":"exact"},{"name":"murein metabolism","type":"exact"},{"name":"peptidoglycan metabolism","type":"exact"}],"termid":"GO:0000270"}


id: PBO:0077895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrapeptide repeat homeobox 1","termid":"PBO:0077895"}


id: GO:0047026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+.","definition_xrefs":["EC:1.1.1.213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"androsterone dehydrogenase [NAD(P)+] activity","termid":"GO:0047023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"androsterone dehydrogenase (A-specific) activity","secondary_identifiers":["Wikipedia:3alpha-hydroxysteroid_dehydrogenase_(A-specific)"],"synonyms":[{"name":"3-alpha-hydroxysteroid dehydrogenase (A-specific) activity","type":"broad"},{"name":"3alpha-hydroxysteroid dehydrogenase (A-specific)","type":"broad"},{"name":"3alpha-hydroxysteroid:NAD(P)+ oxidoreductase (A-specific)","type":"broad"}],"termid":"GO:0047026"}


id: MONDO:0014013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ariboflavinosis","termid":"MONDO:0004573"},{"relation_name":"is_a","term_name":"disorder of metabolite absorption and transport","termid":"MONDO:0017757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"maternal riboflavin deficiency","secondary_identifiers":["MEDGEN:1657395","UMLS:C4750953","GARD:17686","Orphanet:411712"],"synonyms":[{"name":"RBFVD","type":"broad"},{"name":"maternal riboflavin deficiency","type":"exact"},{"name":"riboflavin deficiency","type":"broad"}],"termid":"MONDO:0014013","xrefs":{"Monarch":{"xref_id":"0014013"}}}


id: PR:O94322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC725.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C725.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.03","synonyms":[{"name":"Spom972h-SPBC725.03","type":"exact"}],"termid":"PR:O94322"}


id: GO:0030009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cofactor for the serine protease complement factor I.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete complement factor H activity (obsolete GO:0030009)","synonyms":[{"name":"complement factor H activity","type":"exact"}],"termid":"GO:0030009"}


id: PBO:0073312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small EDRK-rich factor 1A pseudogene 1","termid":"PBO:0073312"}


id: PBO:0034486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_lipid_metabolism_gene_mRNA_during_cellular_response_to_hypoxia","termid":"PBO:0034486"}


id: GO:0030985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kininogen of high molecular mass.","definition_xrefs":["PMID:9520414","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kininogen binding","termid":"GO:0030984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"high molecular weight kininogen binding","synonyms":[{"name":"HK binding","type":"exact"},{"name":"HMW kininogen binding","type":"exact"}],"termid":"GO:0030985"}


id: PBO:0072044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 14","termid":"PBO:0072044"}


id: GO:0047066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a hydroperoxy polyunsaturated fatty acid + 2 glutathione = a hydroxy polyunsaturated fatty acid + glutathione disulfide + H2O.","definition_xrefs":["PMID:3978121","RHEA:19057","PMID:8617728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phospholipid-hydroperoxide glutathione peroxidase activity","secondary_identifiers":["Reactome:R-HSA-9020271","Reactome:R-HSA-9018868","EC:1.11.1.12","Reactome:R-HSA-9018895","Reactome:R-HSA-9020273","MetaCyc:1.11.1.12-RXN"],"synonyms":[{"name":"hydroperoxide glutathione peroxidase activity","type":"related"},{"name":"peroxidation-inhibiting protein activity","type":"related"},{"name":"phospholipid hydroperoxide glutathione peroxidase activity","type":"related"}],"termid":"GO:0047066"}


id: MOD:00800
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-histidine residue, homocitric acid and a one-vanadium seven-iron nine-sulfur cluster to L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide.","definition_xrefs":["PubMed:2345152","RESID:AA0393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"vanadium containing modified residue","termid":"MOD:00772"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide","synonyms":[{"name":"CysHis-[V7Fe9S]","type":"exact"},{"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide carbide","type":"exact"},{"name":"nitrogenase iron-vanadium cofactor","type":"exact"}],"termid":"MOD:00800"}


id: MONDO:0060707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ververi-Brady syndrome","secondary_identifiers":["MEDGEN:1647785","OMIM:617982","GARD:18015","UMLS:C4693824","Orphanet:580940"],"synonyms":[{"name":"VERBRAS","type":"related"},{"name":"Ververi-Brady syndrome","type":"exact"}],"termid":"MONDO:0060707","xrefs":{"Monarch":{"xref_id":"0060707"}}}


id: PBO:0057702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1289-2","termid":"PBO:0057702"}


id: GO:0035488
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97680],"is_not":false,"summary":null,"term":"GO:0035488"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a C/T mispair.","definition_xrefs":["GOC:bf","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"cytosine/thymine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C/T mispair binding","type":"exact"},{"name":"T/C mispair binding","type":"exact"},{"name":"thymine/cytosine mispair binding","type":"exact"}],"termid":"GO:0035488","terms_by_termid":{"GO:0035488":null}}


id: GO:0035593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the Wnt signaling pathway by the directed movement of a Wnt protein within the extracellular region.","definition_xrefs":["PMID:19906850","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway by establishment of Wnt protein localization to extracellular region (obsolete GO:0035593)","synonyms":[{"name":"positive regulation of Wnt diffusion","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway by establishment of Wnt protein localisation in extracellular region","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway by establishment of Wnt protein localization in extracellular region","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway by establishment of Wnt protein localization to extracellular region","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway by establishment of Wnt protein localization in extracellular region","type":"exact"},{"name":"positive regulation of Wnt signaling range","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway by establishment of Wnt protein localization to extracellular region","type":"exact"}],"termid":"GO:0035593"}


id: PBO:0031189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_during_cellular_response_to_salt_stress","termid":"PBO:0031189"}


id: PATO:0001871
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having the shape of a kidney.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reniform","synonyms":[{"name":"bean shaped","type":"related"},{"name":"kidney-shaped","type":"exact"}],"termid":"PATO:0001871"}


id: GO:0031203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the signal sequence of a translated protein binds to and forms a complex with the Sec complex.","definition_xrefs":["PMID:8707814","PMID:12518217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"post-translational protein targeting to endoplasmic reticulum membrane","termid":"GO:0006620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"post-translational protein targeting to membrane, docking","synonyms":[{"name":"Sec-translated protein complex assembly","type":"exact"},{"name":"posttranslational protein membrane targeting, docking","type":"exact"},{"name":"posttranslational protein targeting to membrane, docking","type":"exact"},{"name":"protein docking during posttranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0031203"}


id: PBO:0066656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIO kinase 3 pseudogene 1","termid":"PBO:0066656"}


id: MONDO:0009621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-cervical spine fusion anomalies syndrome is characterized by microcephaly, facial dysmorphism (beaked nose, low-set ears, downslanting palpebral fissures, micrognathia), mild intellectual deficit, short stature, and cervical spine fusion anomalies producing spinal cord compression. It has been described in two brothers born to consanguineous parents. Transmission is likely to be autosomal recessive.","definition_xrefs":["Orphanet:2522"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-cervical spine fusion anomalies syndrome","secondary_identifiers":["UMLS:C0796066","SCTID:715462003","MEDGEN:208663","GARD:3610","MESH:C537325","OMIM:251250"],"synonyms":[{"name":"microcephaly cervical spine fusion anomalies","type":"related"},{"name":"microcephaly with cervical spine fusion anomalies","type":"related"},{"name":"microcephaly, mild intellectual disability, short stature, and skeletal anomalies","type":"related"},{"name":"microcephaly, mild mental retardation, short stature, and skeletal anomalies","type":"related"}],"termid":"MONDO:0009621","xrefs":{"Monarch":{"xref_id":"0009621"}}}


id: MONDO:1012686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in American flamingo due to a mutation in the HEXA gene.","definition_xrefs":["OMIA:001461-9217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, non-human animal","termid":"MONDO:1010167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, HEXA-related, American flamingo","synonyms":[{"name":"gangliosidosis, GM2, type I (B variant), American flamingo","type":"related"}],"termid":"MONDO:1012686","xrefs":{"Monarch":{"xref_id":"1012686"}}}


id: GO:0033359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine, via the intermediates diaminopimelate and N-succinyl-2-amino-6-ketopimelate; in this pathway tetrahydrodipicolinate is converted to meso-diaminopimelate in four enzymatic steps.","definition_xrefs":["GOC:mah","MetaCyc:DAPLYSINESYN-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via diaminopimelate","termid":"GO:0009089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"lysine biosynthetic process via diaminopimelate and N-succinyl-2-amino-6-ketopimelate","synonyms":[{"name":"lysine anabolism via diaminopimelate and N-succinyl-2-amino-6-ketopimelate","type":"exact"},{"name":"lysine biosynthesis via diaminopimelic acid and N-succinyl-2-amino-6-ketopimelate","type":"exact"},{"name":"lysine biosynthetic process via diaminopimelic acid and N-succinyl-2-amino-6-ketopimelate","type":"exact"},{"name":"lysine formation via diaminopimelate and N-succinyl-2-amino-6-ketopimelate","type":"exact"},{"name":"lysine synthesis via diaminopimelate and N-succinyl-2-amino-6-ketopimelate","type":"exact"}],"termid":"GO:0033359"}


id: GO:1904286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein-pyridoxal-5-phosphate linkage.","definition_xrefs":["GOC:TermGenie","PMID:25957689","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein-pyridoxal-5-phosphate linkage","termid":"GO:1904285"},{"relation_name":"negatively_regulates","term_name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein-pyridoxal-5-phosphate linkage","synonyms":[{"name":"down regulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"down-regulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"downregulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"inhibition of protein-pyridoxal-5-phosphate linkage","type":"narrow"}],"termid":"GO:1904286"}


id: GO:0097129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D2 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D2-CDK4 complex","termid":"GO:0097129"}


id: PBO:0068782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 19, pseudogene","termid":"PBO:0068782"}


id: FYPO:0001703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which a specific mitotic cell cycle checkpoint is normal (i.e. indistinguishable from wild type). A cell cycle checkpoint controls cell cycle progression by monitoring the timing and integrity of specific cell cycle events.","definition_xrefs":["GO:0000075","GO:0007093","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint phenotype","termid":"FYPO:0000137"},{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0000257","FYPO:0001312","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic cell cycle checkpoint","synonyms":[{"name":"normal cell cycle checkpoint activation","type":"exact"}],"termid":"FYPO:0001703"}


id: PBO:0017807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease type C2 protein hE1 homolog Npc2 (predicted)","termid":"PBO:0017807"}


id: GO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aging dependent sterility (sensu Fungi) (obsolete GO:0030464)","synonyms":[{"name":"aging dependent sterility (sensu Fungi)","type":"exact"}],"termid":"GO:0030464"}


id: GO:1990520
data:
  {"annotated_genes":["SJAG_00460","SJAG_02542"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102760,117014],"is_not":false,"summary":null,"term":"GO:1990520"}]},"cv_name":"cellular_component","definition":"A protein complex that includes separase (a protease which cleaves cohesin as part of chromosome separation) and securin, a protease inhibitor. Chromosome separation is inhibited until securin is degraded by the Anaphase Promoting Complex (APC).","definition_xrefs":["GOC:dos","GOC:vw","PMID:8978688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase complex","termid":"GO:1905369"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_02542":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"separase-securin complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cut1-2 complex","type":"exact"}],"termid":"GO:1990520","terms_by_termid":{"GO:1990520":null}}


id: GO:0018197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-aspartic acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}


id: PBO:0073928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 1","termid":"PBO:0073928"}


id: MONDO:0032655
data:
  {"annotated_genes":["SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85795],"is_not":false,"summary":null,"term":"MONDO:0032655"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02838":null},"genotype_count":0,"is_obsolete":false,"name":"visual impairment and progressive phthisis bulbi","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618283","DOID:0070356","MEDGEN:1648430","UMLS:C4748978"],"synonyms":[{"name":"VIPB","type":"related"},{"name":"VISUAL IMPAIRMENT AND PROGRESSIVE PHTHISIS BULBI","type":"related"}],"termid":"MONDO:0032655","terms_by_termid":{"MONDO:0032655":null},"xrefs":{"Monarch":{"xref_id":"0032655"}}}


id: GO:1905337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aggrephagy.","definition_xrefs":["GO_REF:0000058","PMID:25686248","GOC:pad","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of aggrephagy","termid":"GO:1905335"},{"relation_name":"positively_regulates","term_name":"aggrephagy","termid":"GO:0035973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of aggrephagy","synonyms":[{"name":"activation of aggrephagy","type":"narrow"},{"name":"up regulation of aggrephagy","type":"exact"},{"name":"up-regulation of aggrephagy","type":"exact"},{"name":"upregulation of aggrephagy","type":"exact"}],"termid":"GO:1905337"}


id: GO:0008758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + UDP-2,3-bis(3-hydroxymyristoyl)glucosamine = 2,3-bis(3-hydroxymyristoyl)-beta-D-glucosaminyl 1-phosphate + UMP.","definition_xrefs":["MetaCyc:LIPIDXSYNTHESIS-RXN","PMID:12000770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"UDP-2,3-diacylglucosamine hydrolase activity","secondary_identifiers":["RHEA:25213"],"termid":"GO:0008758"}


id: GO:0102197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: but-3-enoate + H2O = allyl alcohol + formate.","definition_xrefs":["GOC:pz","PMID:19555778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vinylacetate caboxylester hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12087"],"termid":"GO:0102197"}


id: PBO:0059361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 7","termid":"PBO:0059361"}


id: GO:0007286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"part_of","term_name":"spermatid differentiation","termid":"GO:0048515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid development","secondary_identifiers":["Wikipedia:Spermiogenesis"],"synonyms":[{"name":"spermatid cell development","type":"exact"},{"name":"spermiogenesis","type":"exact"}],"termid":"GO:0007286"}


id: PBO:0027032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nuclear_envelope","termid":"PBO:0027032"}


id: PBO:0066478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFK pseudogene 5","termid":"PBO:0066478"}


id: GO:0015817
data:
  {"annotated_genes":["SJAG_03256","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[103320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"}]},"cv_name":"biological_process","definition":"The directed movement of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transport","termid":"GO:0015802"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"histidine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-histidine transport","type":"narrow"}],"termid":"GO:0015817","terms_by_termid":{"GO:0089708":null,"GO:0090513":null}}


id: PBO:0074947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111","termid":"PBO:0074947"}


id: PBO:0088330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi multispanning membrane VanZ-like family protein","termid":"PBO:0088330"}


id: PBO:0039302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG14 antisense RNA 1","termid":"PBO:0039302"}


id: MOD:00833
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-glucosyl-asparagine.","definition_xrefs":["RESID:AA0421","PubMed:3410849","PubMed:1569073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"N4-hexosylated asparagine","termid":"MOD:01346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-glucosyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-(D-glucopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (Glc)","type":"exact"},{"name":"CARBOHYD N-linked (Glc) asparagine","type":"exact"},{"name":"N4-(D-glucopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-asparagine-glucoside","type":"exact"},{"name":"N4-glucosyl-L-asparagine","type":"exact"},{"name":"N4-glucosylasparagine","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4GlcAsn","type":"exact"}],"termid":"MOD:00833"}


id: GO:1990429
data:
  {"annotated_genes":["SJAG_05315","SJAG_03324","SJAG_00891","SJAG_02693"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95972,96457,100796,102574],"is_not":false,"summary":null,"term":"GO:1990429"}]},"cv_name":"cellular_component","definition":"A protein complex responsible for transporting proteins into the peroxisomal matrix. An example of this complex is Pex14 found in S. cerevisae which has 9 core components and 12 transient interaction partners.","definition_xrefs":["PMID:12667447","PMID:20154681","PMID:22375831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00891":null,"SJAG_02693":null,"SJAG_03324":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"peroxisomal importomer complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990415"],"synonyms":[{"name":"Pex14 complex","type":"narrow"},{"name":"Pex17p-Pex14p docking complex","type":"related"},{"name":"peroxisomal import pore","type":"exact"},{"name":"peroxisomal protein import machinery","type":"exact"}],"termid":"GO:1990429","terms_by_termid":{"GO:1990429":null}}


id: GO:0102935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + gypsogenin = gypsogenin-28-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gypsogenin-UDP-glucosyltransferase activity (obsolete GO:0102935)","termid":"GO:0102935"}


id: PBO:0069511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 780, pseudogene","termid":"PBO:0069511"}


id: PBO:0089532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Pcr1","termid":"PBO:0089532"}


id: PBO:0062163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 4 pseudogene","termid":"PBO:0062163"}


id: PR:G2TRP5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox7 gene.","definition_xrefs":["UniProtKB:G2TRP5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.17","synonyms":[{"name":"Spom972h-cox7","type":"exact"}],"termid":"PR:G2TRP5"}


id: PBO:0069446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 711, pseudogene","termid":"PBO:0069446"}


id: PR:P40383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5'-3' exoribonuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00728","PANTHER:PTHR12341:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.14","secondary_identifiers":["UniProtKB:P40383"],"synonyms":[{"name":"Exo II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-XRN1","type":"exact"},{"name":"exonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"exonuclease II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p140 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:P40383"}


id: PBO:0004132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopolin-like complex subunit Mde4","termid":"PBO:0004132"}


id: MONDO:1011773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative suspensory ligament desmitis, non-human animal","secondary_identifiers":["OMIA:002086"],"termid":"MONDO:1011773","xrefs":{"Monarch":{"xref_id":"1011773"}}}


id: PBO:0085680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in prospore membrane morphogenesis; peripheral membrane protein that localizes to the prospore membrane and at numerous membrane contact sites; involved in sporulation, vacuolar protein sorting, prospore membrane formation during sporulation, and protein-Golgi retention; required for mitochondrial integrity; contains a PH-like domain; homologous to human CHAC and COH1 which are involved in Chorea-acanthocytosis and Cohen syndrome, respectively","termid":"PBO:0085680"}


id: PBO:0063393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6IP divergent transcript","termid":"PBO:0063393"}


id: PATO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's exhibiting concentration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concentrated","termid":"PATO:0001159"}


id: PR:O74469
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cti1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex protein C1739.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.07","synonyms":[{"name":"Spom972h-cti1","type":"exact"}],"termid":"PR:O74469"}


id: GO:0102093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acryloyl-CoA + H2O = acrylate + coenzyme A + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete acrylate:acyl-coA CoA transferase activity (obsolete GO:0102093)","termid":"GO:0102093"}


id: PBO:0109954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-III regulator Alx1","termid":"PBO:0109954"}


id: MONDO:0005107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatocellular adenoma (obsolete MONDO:0005107)","termid":"MONDO:0005107","xrefs":{"Monarch":{"xref_id":"0005107"}}}


id: PBO:0068534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 136, pseudogene","termid":"PBO:0068534"}


id: GO:0047858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydroxyfumarate + H+ = 2-hydroxy-3-oxopropanoate + CO2.","definition_xrefs":["EC:4.1.1.54","RHEA:13845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"dihydroxyfumarate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03127","MetaCyc:DIHYDROXYFUMARATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"dihydroxyfumarate carboxy-lyase (tartronate-semialdehyde-forming)","type":"related"},{"name":"dihydroxyfumarate carboxy-lyase activity","type":"related"}],"termid":"GO:0047858"}


id: GO:0035814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal sodium excretion","termid":"GO:0035813"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}


id: PBO:0028273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_microtubule_dwell_time_at_cell_tip","termid":"PBO:0028273"}


id: PBO:0036297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible membrane linking protein involved in beta-glucan biosynthesis (predicted)","termid":"PBO:0036297"}


id: GO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete effector caspase activity (obsolete GO:0004207)","synonyms":[{"name":"effector caspase activity","type":"exact"}],"termid":"GO:0004207"}


id: PBO:0089471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-bS1m","termid":"PBO:0089471"}


id: PBO:0039889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 44","termid":"PBO:0039889"}


id: FYPO:0007302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is too low to detect when the cell is subject to heat shock. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah","PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein absent from cell during vegetative growth","termid":"FYPO:0001984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"protein absent from cell during heat shock","synonyms":[{"name":"protein absent from cell during heat shock during mitotic cell cycle","type":"related"},{"name":"protein absent from cell during heat shock during vegetative growth","type":"exact"},{"name":"undetectable cellular protein level during heat shock","type":"exact"}],"termid":"FYPO:0007302"}


id: GO:0031023
data:
  {"annotated_genes":["SJAG_03200","SJAG_02529","SJAG_04003","SJAG_03544","SJAG_03052","SJAG_01760","SJAG_04558","SJAG_03915","SJAG_04745","SJAG_01805","SJAG_00773","SJAG_03264","SJAG_04901","SJAG_00794","SJAG_00719","SJAG_02795","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031025"},{"annotations":[94810],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140456"},{"annotations":[94811,75224,94274],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[101813,112208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031024"},{"annotations":[93300,114567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990395"},{"annotations":[89641,106894,112081,112286,114568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903087"},{"annotations":[97782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905047"},{"annotations":[96374,113373,90806],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"},{"annotations":[94874,89158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051300"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microtubule organizing center, a structure from which microtubules grow.","definition_xrefs":["GOC:mah","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00719":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_01760":null,"SJAG_01805":null,"SJAG_02529":null,"SJAG_02795":null,"SJAG_03052":null,"SJAG_03200":null,"SJAG_03264":null,"SJAG_03544":null,"SJAG_03915":null,"SJAG_04003":null,"SJAG_04558":null,"SJAG_04745":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"microtubule organizing center organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"microtubule organising center organisation","type":"exact"},{"name":"microtubule organizing center organization and biogenesis","type":"related"}],"termid":"GO:0031023","terms_by_termid":{"GO:0000073":null,"GO:0031024":null,"GO:0031025":null,"GO:0051300":null,"GO:0140456":null,"GO:1902441":null,"GO:1903087":null,"GO:1905047":null,"GO:1990395":null}}


id: PBO:0030828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoribosylformylglycinamidine_cyclo-ligase_activity","termid":"PBO:0030828"}


id: GO:0047382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-3-phospho-1-thio-D-glycerate + H2O = S-methyl-1-thio-D-glycerate + phosphate.","definition_xrefs":["EC:3.1.3.14","RHEA:16081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"methylphosphothioglycerate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R04317","MetaCyc:3.1.3.14-RXN"],"synonyms":[{"name":"S-methyl-3-phospho-1-thio-D-glycerate phosphohydrolase activity","type":"related"},{"name":"methylthiophosphoglycerate phosphatase activity","type":"related"}],"termid":"GO:0047382"}


id: PATO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000486 moderate response (obsolete PATO:0000486)","termid":"PATO:0000486"}


id: PBO:0086921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Zn(II)2Cys6 motif containing transcription factor; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; similar to S. kluyveri Urc2p involved in uracil catabolism","termid":"PBO:0086921"}


id: GO:0048192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Strengthening of a bond with a peptide antigen; a fragment of a foreign protein derived by proteolysis within the cell.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide antigen stabilization activity (obsolete GO:0048192)","synonyms":[{"name":"peptide antigen stabilization activity","type":"exact"}],"termid":"GO:0048192"}


id: PBO:0059796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 22","termid":"PBO:0059796"}


id: PBO:0064133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2","termid":"PBO:0064133"}


id: MONDO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the submandibular gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland disorder","termid":"MONDO:0001142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submandibular gland disorder","secondary_identifiers":["DOID:12897","UMLS:C0038557","MEDGEN:52535","MESH:D013364"],"synonyms":[{"name":"disease of submandibular gland","type":"exact"},{"name":"disease or disorder of submandibular gland","type":"exact"},{"name":"disorder of submandibular gland","type":"exact"},{"name":"submandibular gland disease","type":"exact"},{"name":"submandibular gland disease or disorder","type":"exact"}],"termid":"MONDO:0001597","xrefs":{"Monarch":{"xref_id":"0001597"}}}


id: PATO:0015006
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a structure by virtue of it consisting of many of repeated, similar or identical subunits, arranged in some orderly array.","definition_xrefs":["GOC:DOS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymeric","termid":"PATO:0015006"}


id: GO:0090385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of a phagolysosome from a phagosome and a lysosome.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"phagolysosome assembly","termid":"GO:0001845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0016192","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"phagosome-lysosome fusion","termid":"GO:0090385"}


id: GO:0071499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a laminar fluid shear stress stimulus. Laminar fluid flow is the force acting on an object in a system where the fluid is moving across a solid surface in parallel layers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to laminar fluid shear stress","termid":"GO:0034616"},{"relation_name":"is_a","term_name":"cellular response to fluid shear stress","termid":"GO:0071498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to laminar fluid shear stress","termid":"GO:0071499"}


id: PBO:0091089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MVB sorting pathway protein Ist1","termid":"PBO:0091089"}


id: PR:Q09675
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3102 gene.","definition_xrefs":["UniProtKB:Q09675","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3102 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.02c","synonyms":[{"name":"Spom972h-hsp3102","type":"exact"},{"name":"glyoxalase 3 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09675"}


id: GO:0035949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of gluconeogenesis by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17875938","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035949)","synonyms":[{"name":"positive regulation of gluconeogenesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of gluconeogenesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of glucose biosynthetic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035949"}


id: MOD:00763
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation - missing ref","definition_xrefs":["Unimod:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"biantennary (-1 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Biantennary (-1 galactose)","type":"related"},{"name":"Hex(4)HexNAc(4)","type":"related"}],"termid":"MOD:00763"}


id: GO:0044017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 27) = CoA + histone H3 N6-acetyl-L-lysine (position 27).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0034212","GO:0140096","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"histone H3K27 acetyltransferase activity","synonyms":[{"name":"histone H3-K27 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K27 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K27 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0044017"}


id: FYPO:0004975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which depolymerization (i.e. removal of tubulin dimers) of microtubules extending behind a moving spindle pole body occurs at a lower rate, or speed, than normal.","definition_xrefs":["GO:0036078","PomBase:mah","PMID:16611238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization behind moving spindle pole body","synonyms":[{"name":"decreased microtubule shrinkage behind moving spindle pole body","type":"related"},{"name":"decreased rate of backward-extending microtubule depolymerization","type":"exact"},{"name":"decreased rate of microtubule catastrophe behind moving spindle pole body","type":"related"},{"name":"decreased rate of microtubule depolymerisation behind moving spindle pole body","type":"exact"},{"name":"decreased rate of microtubule depolymerization behind moving SPB","type":"exact"},{"name":"decreased rate of microtubule depolymerization behind moving spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule depolymerization behind moving spindle pole body during vegetative growth","type":"exact"},{"name":"increased microtubule stability behind moving spindle pole body","type":"related"},{"name":"increased stability of backwards-extending microtubules","type":"related"},{"name":"reduced rate of microtubule depolymerization behind moving spindle pole body","type":"exact"}],"termid":"FYPO:0004975"}


id: MONDO:0031045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, IIa 11","secondary_identifiers":["OMIM:620019","UMLS:C5774205","MEDGEN:1823978"],"synonyms":[{"name":"DA11","type":"exact"},{"name":"arthrogryposis, distal, IIa 11","type":"exact"}],"termid":"MONDO:0031045","xrefs":{"Monarch":{"xref_id":"0031045"}}}


id: PBO:0073654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIM1 antisense RNA 1","termid":"PBO:0073654"}


id: GO:0004825
data:
  {"annotated_genes":["SJAG_01159","SJAG_16456"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94748,104679],"is_not":false,"summary":null,"term":"GO:0004825"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-methionyl-tRNA(Met).","definition_xrefs":["EC:6.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01159":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0140098","GO:0003824","GO:0140101"],"is_obsolete":false,"name":"methionine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:13481","Reactome:R-HSA-380157","MetaCyc:METHIONINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379994"],"synonyms":[{"name":"L-methionine:tRNAMet ligase (AMP-forming)","type":"related"},{"name":"MetRS activity","type":"related"},{"name":"methionine translase activity","type":"related"},{"name":"methionyl-tRNA synthetase activity","type":"exact"},{"name":"methionyl-transfer RNA synthetase activity","type":"related"},{"name":"methionyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"methionyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004825","terms_by_termid":{"GO:0004825":null}}


id: PBO:0091106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex platform subcomplex scaffold subunit Apc1","termid":"PBO:0091106"}


id: MONDO:0032681
data:
  {"annotated_genes":["SJAG_04618"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85598],"is_not":false,"summary":null,"term":"MONDO:0032681"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04618":null},"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, progressive, early-onset, with episodic rhabdomyolysis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1682670","UMLS:C5193033","OMIM:618331"],"synonyms":[{"name":"ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH EPISODIC RHABDOMYOLYSIS","type":"related"},{"name":"PEERB","type":"related"}],"termid":"MONDO:0032681","terms_by_termid":{"MONDO:0032681":null},"xrefs":{"Monarch":{"xref_id":"0032681"}}}


id: MONDO:0015606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xp22.3 microdeletion syndrome is a microdeletion syndrome resulting from a partial deletion of the chromosome X. Phenotype is highly variable (depending on length of deletion), but is mainly characterized by X linked ichthyosis, mild-moderate intellectual deficit, Kallmann syndrome, short stature, chondrodysplasia punctata and ocular albinism. Epilepsy, attention deficit-hyperactivity disorder, autism and difficulties with social communication can be associated.","definition_xrefs":["Orphanet:1643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the short arm of chromosome X","termid":"MONDO:0017004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xp22.3 microdeletion syndrome","secondary_identifiers":["SCTID:726733007","MEDGEN:1388343","UMLS:C4512072","GARD:18733"],"synonyms":[{"name":"Del(X)(p23)","type":"exact"}],"termid":"MONDO:0015606","xrefs":{"Monarch":{"xref_id":"0015606"}}}


id: PBO:0035812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_tRNA_genes_during_vegetative_growth","termid":"PBO:0035812"}


id: MONDO:0012960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the SYNGAP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 5","secondary_identifiers":["GARD:12558","MEDGEN:382611","DOID:0070035","MESH:C567234","OMIM:612621","UMLS:C2675473"],"synonyms":[{"name":"MRD5","type":"exact"},{"name":"SYNGAP1 Gene mutation linked to intellectual disability, schizophrenia and autism","type":"related"},{"name":"SYNGAP1 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"SYNGAP1 syndrome","type":"related"},{"name":"SYNGAP1-related NSID","type":"related"},{"name":"SYNGAP1-related non-syndromic intellectual disability","type":"related"},{"name":"autosomal dominant intellectual disability 5","type":"exact"},{"name":"autosomal dominant mental retardation 5","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 5","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in SYNGAP1","type":"exact"},{"name":"intellectual disability, autosomal dominant 5","type":"exact"},{"name":"intellectual disability, autosomal dominant type 5","type":"exact"},{"name":"mental retardation, autosomal dominant 5","type":"related"},{"name":"mental retardation, autosomal dominant type 5","type":"exact"}],"termid":"MONDO:0012960","xrefs":{"Monarch":{"xref_id":"0012960"}}}


id: PBO:0084435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; transcription factor; part of the complex locus MAL6, plays a positive role in the regulation of maltose fermentation","termid":"PBO:0084435"}


id: MONDO:0032809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis, fulminant viral, susceptibility to","secondary_identifiers":["MEDGEN:1684882","OMIM:618549","UMLS:C5231406"],"synonyms":[{"name":"FVH","type":"related"},{"name":"HEPATITIS, FULMINANT VIRAL, SUSCEPTIBILITY TO","type":"related"}],"termid":"MONDO:0032809","xrefs":{"Monarch":{"xref_id":"0032809"}}}


id: MONDO:0013214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bile acid malabsorption, primary, 1","secondary_identifiers":["MEDGEN:1794144","MESH:C567652","OMIM:613291","Orphanet:449262","UMLS:C5561934"],"synonyms":[{"name":"Bile acid malabsorption, primary, 1","type":"exact"},{"name":"PBAM","type":"related"},{"name":"bile acid malabsorption, primary","type":"exact"}],"termid":"MONDO:0013214","xrefs":{"Monarch":{"xref_id":"0013214"}}}


id: PBO:0058032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4253","termid":"PBO:0058032"}


id: PATO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000121 relative height (obsolete PATO:0000121)","termid":"PATO:0000121"}


id: SO:0000822
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a cyanelle.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"cyanelle_sequence","termid":"SO:0000746"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_chromosome","synonyms":[{"name":"cyanelle chromosome","type":"exact"}],"termid":"SO:0000822"}


id: PBO:0071298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 21","termid":"PBO:0071298"}


id: SO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements with respect to the TSS (+1). Consensus sequence is YGGTCACACTR. Marked spatial preference within core promoter; tend to occur near the TSS, although not as tightly as INR (SO:0000014).","definition_xrefs":["PMID:16827941:12537576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMv4_motif","synonyms":[{"name":"DMv4","type":"exact"},{"name":"DMv4 motif","type":"exact"},{"name":"YGGTCACATR","type":"narrow"},{"name":"directional motif v4","type":"exact"},{"name":"motif 1 element","type":"exact"},{"name":"promoter motif 1","type":"exact"}],"termid":"SO:0001157"}


id: MONDO:0019229
data:
  {"annotated_genes":["SJAG_00413","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008760"},{"annotations":[86076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009492"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of ketone body catabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"disorder of fatty acid and ketone body metabolism","termid":"MONDO:0019223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_02769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of ketolysis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681845","GARD:18960","icd11.foundation:1454722246","MEDGEN:1842927","Orphanet:79183"],"synonyms":[{"name":"disorder of ketolysis","type":"broad"},{"name":"inborn error of ketone body catabolic process","type":"exact"},{"name":"inborn ketone body catabolic process disorder","type":"exact"},{"name":"rare inborn error of ketone body catabolic process","type":"exact"}],"termid":"MONDO:0019229","terms_by_termid":{"MONDO:0008760":null,"MONDO:0009492":null},"xrefs":{"Monarch":{"xref_id":"0019229"}}}


id: GO:0051969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"regulates","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transmission of nerve impulse","synonyms":[{"name":"regulation of conduction of nerve impulse","type":"exact"}],"termid":"GO:0051969"}


id: MONDO:0016246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenocarcinoma of ovary (obsolete MONDO:0016246)","termid":"MONDO:0016246","xrefs":{"Monarch":{"xref_id":"0016246"}}}


id: MONDO:0700098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm, non-human animal","termid":"MONDO:0700098","xrefs":{"Monarch":{"xref_id":"0700098"}}}


id: GO:0075331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of formation of structure involved in a symbiotic process","termid":"GO:0044147"},{"relation_name":"is_a","term_name":"regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075329"},{"relation_name":"negatively_regulates","term_name":"formation of arbuscule for nutrient acquisition","termid":"GO:0075328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075331"}


id: MONDO:0030908
data:
  {"annotated_genes":["SJAG_04176"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84829],"is_not":false,"summary":null,"term":"MONDO:0030908"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04176":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked, syndromic, 35","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080241","MEDGEN:1392054","OMIM:300998","UMLS:C4478383"],"synonyms":[{"name":"MRXS35","type":"related"},{"name":"intellectual developmental disorder, X-linked, syndromic, 35, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, 35","type":"exact"},{"name":"mental retardation, X-linked, syndromic, 35","type":"related"},{"name":"syndromic X-linked intellectual disability 35","type":"related"},{"name":"syndromic X-linked mental retardation 35","type":"related"}],"termid":"MONDO:0030908","terms_by_termid":{"MONDO:0030908":null},"xrefs":{"Monarch":{"xref_id":"0030908"}}}


id: PBO:0005730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf20","termid":"PBO:0005730"}


id: GO:1902343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltose transport.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:23770568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"maltose transport","termid":"GO:0015768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of maltose transport","termid":"GO:1902343"}


id: PBO:0029281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0029281"}


id: PBO:0082168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent methyltransferase; involved in a novel 3-methylhistidine modification of multiple proteins, including ribosomal protein Rpl3p; seven beta-strand MTase family member; null mutant exhibits a weak vacuolar protein sorting defect and caspofungin resistance","termid":"PBO:0082168"}


id: PBO:0030497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_iron-sulfur_cluster_binding","termid":"PBO:0030497"}


id: GO:0000114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are transcribed as part of the G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in G1 phase of mitotic cell cycle (obsolete GO:0000114)","synonyms":[{"name":"G1-specific transcription in mitotic cell cycle","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter during G1 phase of cell cycle","type":"exact"},{"name":"regulation of transcription involved in G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000114"}


id: PR:Q09674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.01 gene.","definition_xrefs":["UniProtKB:Q09674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0317 protein C5H10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.01","synonyms":[{"name":"Spom972h-SPAC5H10.01","type":"exact"}],"termid":"PR:Q09674"}


id: GO:2000525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell costimulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of T cell costimulation","termid":"GO:2000523"},{"relation_name":"positively_regulates","term_name":"T cell costimulation","termid":"GO:0031295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell costimulation","synonyms":[{"name":"positive regulation of T cell co-stimulation","type":"exact"},{"name":"positive regulation of T lymphocyte costimulation","type":"exact"},{"name":"positive regulation of T-cell co-stimulation","type":"exact"},{"name":"positive regulation of T-cell costimulation","type":"exact"},{"name":"positive regulation of T-lymphocyte costimulation","type":"exact"}],"termid":"GO:2000525"}


id: PBO:0080912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 1","termid":"PBO:0080912"}


id: PBO:0028998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_proline_nitrogen_source","termid":"PBO:0028998"}


id: PBO:0054827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2240","termid":"PBO:0054827"}


id: PBO:0082696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the kinetochore-associated Ndc80 complex; involved in chromosome segregation, spindle checkpoint activity, and kinetochore clustering; evolutionarily conserved; other members include Ndc80p, Nuf2p, Spc24p, and Spc25p","termid":"PBO:0082696"}


id: PBO:0041928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 1 pseudogene 3","termid":"PBO:0041928"}


id: MONDO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gangliocytoma (obsolete MONDO:0002294)","termid":"MONDO:0002294","xrefs":{"Monarch":{"xref_id":"0002294"}}}


id: GO:0046839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from a phosphorylated lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phospholipid dephosphorylation","termid":"GO:0046839"}


id: GO:0099531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway leading to secretion of a neurotransmitter from the presynapse as part of synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"presynaptic process involved in chemical synaptic transmission","termid":"GO:0099531"}


id: PBO:0052235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9 pseudogene 3","termid":"PBO:0052235"}


id: PR:O13339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A telomerase reverse transcriptase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12066:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase reverse transcriptase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.14c","secondary_identifiers":["UniProtKB:O13339"],"synonyms":[{"name":"SPBC29A3.14c","type":"related"},{"name":"Spom972h-TERT","type":"exact"},{"name":"telomerase catalytic subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13339"}


id: GO:0160193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of L-lactate dehydrogenase.","definition_xrefs":["PMID:33406399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0098772","GO:0004857","GO:0003674"],"is_obsolete":false,"name":"L-lactate dehydrogenase inhibitor activity","termid":"GO:0160193"}


id: GO:0052912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanine(748) in 23S rRNA = N(1)-methylguanine(748) in 23S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N1-)-methyltransferase activity","termid":"GO:0008989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"23S rRNA (guanine(748)-N(1))-methyltransferase activity","secondary_identifiers":["RHEA:42904","MetaCyc:RXN-11599"],"synonyms":[{"name":"23S rRNA m(1)G(748) methyltransferase activity","type":"broad"}],"termid":"GO:0052912"}


id: GO:0016156
data:
  {"annotated_genes":["SJAG_00203"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89684],"is_not":false,"summary":null,"term":"GO:0016156"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + succinate = fumarate + H+ + NADH.","definition_xrefs":["RHEA:18281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate dehydrogenase activity","termid":"GO:0000104"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"fumarate reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00402","MetaCyc:FUMARATE-REDUCTASE-NADH-RXN","EC:1.3.1.6"],"synonyms":[{"name":"NADH-dependent fumarate reductase activity","type":"related"}],"termid":"GO:0016156","terms_by_termid":{"GO:0016156":null}}


id: GO:0010012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-alpha-campestanaol + O2 = 6-deoxocathasterone + H2O.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete steroid 22-alpha hydroxylase activity (obsolete GO:0010012)","termid":"GO:0010012"}


id: PBO:0070310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 16","termid":"PBO:0070310"}


id: PBO:0054182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1556","termid":"PBO:0054182"}


id: GO:0045618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of keratinocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epidermal cell differentiation","termid":"GO:0045606"},{"relation_name":"is_a","term_name":"regulation of keratinocyte differentiation","termid":"GO:0045616"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte differentiation","synonyms":[{"name":"activation of keratinocyte differentiation","type":"narrow"},{"name":"stimulation of keratinocyte differentiation","type":"narrow"},{"name":"up regulation of keratinocyte differentiation","type":"exact"},{"name":"up-regulation of keratinocyte differentiation","type":"exact"},{"name":"upregulation of keratinocyte differentiation","type":"exact"}],"termid":"GO:0045618"}


id: GO:0001177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a process involved the melting of the DNA hybrid of the core promoter region within the transcriptional closed complex of an RNA polymerase II preinitiation complex (PIC) to produce an open complex where the DNA duplex around the transcription initiation site is unwound to form the transcription bubble.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"transcription open complex formation at RNA polymerase II promoter","termid":"GO:0001113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transcription open complex formation at RNA polymerase II promoter","synonyms":[{"name":"regulation of transcriptional open complex formation at RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001177"}


id: PBO:0054492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1892","termid":"PBO:0054492"}


id: MONDO:0013077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Santos syndrome","secondary_identifiers":["OMIM:613005","MESH:C567819","MEDGEN:414444","UMLS:C2751698"],"synonyms":[{"name":"Santos syndrome","type":"exact"},{"name":"fibular agenesis/hypoplasia, oligodactylous clubfeet, and anonychia/nail hypoplasia syndrome","type":"related"}],"termid":"MONDO:0013077","xrefs":{"Monarch":{"xref_id":"0013077"}}}


id: PBO:0065754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen phosphorylase L","termid":"PBO:0065754"}


id: MONDO:0017896
data:
  {"annotated_genes":["SJAG_01970","SJAG_03453","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86827,86828,85385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"Familial nonmedullary thyroid carcinoma (fNMTC) is a rare non-syndromic form of thyroid cancer characterized by occurrence of thyroid carcinoma (TC) as the primary feature in a familial setting.","definition_xrefs":["Orphanet:319494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial nonmedullary thyroid carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3501843","MEDGEN:502247","GARD:21421","OMIMPS:188550"],"synonyms":[{"name":"thyroid cancer, nonmedullary","type":"exact"}],"termid":"MONDO:0017896","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0017896"}}}


id: MONDO:0002869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the cardial valve.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"heart valve disorder","secondary_identifiers":["MEDGEN:5463","NCIT:C45525","EFO:0009551","DOID:4079","UMLS:C0018824","ICD9:424.99","NANDO:2100105","MESH:D006349","SCTID:368009"],"synonyms":[{"name":"cardial valve disease","type":"exact"},{"name":"cardial valve disease or disorder","type":"exact"},{"name":"disease of cardial valve","type":"exact"},{"name":"disease or disorder of cardial valve","type":"exact"},{"name":"disorder of cardial valve","type":"exact"},{"name":"disorder of heart valve","type":"exact"},{"name":"heart valve disorder","type":"exact"},{"name":"valvular heart disease","type":"exact"},{"name":"valvular heart disorder","type":"exact"}],"termid":"MONDO:0002869","xrefs":{"Monarch":{"xref_id":"0002869"}}}


id: PBO:0113512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type V myosin motor involved in actin-based transport of cargos; required for the polarized delivery of secretory vesicles, the vacuole, late Golgi elements, peroxisomes, lipid droplets, and the mitotic spindle; effector of Ypt11p, a rab-type small GTPase; MYO2 has a paralog, MYO4, that arose from the whole genome duplication","termid":"PBO:0113512"}


id: GO:2000594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric DCT cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of metanephric DCT cell differentiation","termid":"GO:2000592"},{"relation_name":"positively_regulates","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric DCT cell differentiation","synonyms":[{"name":"positive regulation of metanephric distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:2000594"}


id: PBO:0030527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin","termid":"PBO:0030527"}


id: GO:0047940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronate + ATP = 1-phospho-alpha-D-glucuronate + ADP + 2 H+.","definition_xrefs":["RHEA:17005","EC:2.7.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"glucuronokinase activity","secondary_identifiers":["MetaCyc:GLUCURONOKINASE-RXN","KEGG_REACTION:R01476"],"synonyms":[{"name":"ATP:D-glucuronate 1-phosphotransferase activity","type":"related"},{"name":"glucurono-glucuronokinase activity","type":"related"},{"name":"glucuronokinase (phosphorylating)","type":"related"}],"termid":"GO:0047940"}


id: PBO:0056938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-3","termid":"PBO:0056938"}


id: PATO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation inhering in a bearer by virtue of the bearer's placement at an angle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angle","termid":"PATO:0002326"}


id: PBO:0073328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 4","termid":"PBO:0073328"}


id: GO:0050187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-phosphocreatine + H2O = creatine + phosphate.","definition_xrefs":["RHEA:12977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid phosphorus-nitrogen bonds","termid":"GO:0016825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"phosphoamidase activity","secondary_identifiers":["EC:3.9.1.1","KEGG_REACTION:R01882","MetaCyc:PHOSPHOAMIDASE-RXN"],"synonyms":[{"name":"creatine phosphatase activity","type":"related"},{"name":"phosphamide hydrolase activity","type":"related"}],"termid":"GO:0050187"}


id: SO:0000646
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small RNA molecule that is the product of a longer exogenous or endogenous dsRNA, which is either a bimolecular duplex or very long hairpin, processed (via the Dicer pathway) such that numerous siRNAs accumulate from both strands of the dsRNA. siRNAs trigger the cleavage of their target molecules.","definition_xrefs":["PMID:12592000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/SiRNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:siRNA","type":"exact"},{"name":"small interfering RNA","type":"exact"}],"termid":"SO:0000646"}


id: GO:0032729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon.","definition_xrefs":["PMID:15546383","GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of type II interferon production","termid":"GO:0032649"},{"relation_name":"positively_regulates","term_name":"type II interferon production","termid":"GO:0032609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of type II interferon production","secondary_identifiers":["GO:0045078","GO:1902715"],"synonyms":[{"name":"activation of interferon-gamma production","type":"narrow"},{"name":"positive regulation of interferon-gamma biosynthetic process","type":"narrow"},{"name":"positive regulation of interferon-gamma production","type":"exact"},{"name":"positive regulation of interferon-gamma secretion","type":"narrow"},{"name":"stimulation of interferon-gamma production","type":"narrow"},{"name":"up regulation of interferon-gamma production","type":"exact"},{"name":"up-regulation of interferon-gamma production","type":"exact"},{"name":"upregulation of interferon-gamma production","type":"exact"}],"termid":"GO:0032729"}


id: MONDO:0019059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare parkinsonian disorder.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare parkinsonian disorder (obsolete MONDO:0019059)","secondary_identifiers":["Orphanet:68402"],"synonyms":[{"name":"rare hypokinetic movement disorder","type":"exact"},{"name":"rare parkinsonian disorder","type":"exact"}],"termid":"MONDO:0019059","xrefs":{"Monarch":{"xref_id":"0019059"}}}


id: MONDO:0043759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectopic pregnancy characterized by the implantation of the embryo in the peritoneal cavity or abdominal organs.","definition_xrefs":["NCIT:C92921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectopic pregnancy","termid":"MONDO:0000755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abdominal ectopic pregnancy","secondary_identifiers":["MESH:D011269","SCTID:82661006","MEDGEN:46072","UMLS:C0032984"],"synonyms":[{"name":"Pregnancies, abdominal","type":"related"},{"name":"abdomen ectopic pregnancy","type":"exact"},{"name":"abdominal Pregnancies","type":"related"},{"name":"abdominal pregnancy","type":"exact"},{"name":"ectopic pregnancy of abdomen","type":"exact"},{"name":"intra-abdominal pregnancy","type":"exact"}],"termid":"MONDO:0043759","xrefs":{"Monarch":{"xref_id":"0043759"}}}


id: GO:0090511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell division process where the division plane is parallel to the surface of the organ. It creates a new cell layer or cell file.","definition_xrefs":["PMID:21391814","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periclinal cell division","termid":"GO:0090511"}


id: PBO:0067493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 628, pseudogene","termid":"PBO:0067493"}


id: GO:0070464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to the alpha3 chain of type VI collagen; the integrin binds most strongly to unfolded collagen.","definition_xrefs":["PMID:8387021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphav-beta3 integrin-collagen alpha3(VI) complex","termid":"GO:0070464"}


id: PR:P0CT43
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-8 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.09c","synonyms":[{"name":"Spom972h-Tf2-8","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT43"}


id: MONDO:0016367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatomyositis (DM) is a type of idiopathic inflammatory myopathy characterized by evocative skin lesions and symmetrical proximal muscle weakness.","definition_xrefs":["Orphanet:221"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic disease with skin involvement (obsolete MONDO:0017368)","termid":"MONDO:0017368"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"polymyositis","termid":"MONDO:0019127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005093"],"is_obsolete":false,"name":"dermatomyositis","secondary_identifiers":["MESH:D003882","MedDRA:10012503","NANDO:1200274","DOID:10223","NORD:1048","EFO:0000398","UMLS:C0011633","GARD:6263","ICD9:710.3","MEDGEN:8331","icd11.foundation:739030149","NCIT:C26744","SCTID:396230008"],"synonyms":[{"name":"Amyopathic dermatomyositis","type":"related"},{"name":"DM","type":"exact"},{"name":"adult dermatomyositis","type":"narrow"},{"name":"dermatomyositis","type":"exact"},{"name":"dermatopolymyositis","type":"exact"},{"name":"polymyositis with skin involvement","type":"exact"}],"termid":"MONDO:0016367","xrefs":{"Monarch":{"xref_id":"0016367"}}}


id: PBO:0061200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOC2 like nucleolar associated transcriptional repressor","termid":"PBO:0061200"}


id: GO:0039721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear viral factory formed at the periphery of the host cell nucleus by Baculoviruses.","definition_xrefs":["VZ:1951","PMID:18434402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear viral factory","termid":"GO:0039715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"peristromal region viral factory","synonyms":[{"name":"PR","type":"related"}],"termid":"GO:0039721"}


id: MONDO:0012253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple epiphyseal dysplasia, with severe proximal femoral dysplasia is a rare primary bone dysplasia characterized by severe, early-onset dysplasia of the proximal femurs, with almost complete absence of the secondary ossification centers and abnormal development of the femoral necks (short and broad with irregular metaphyses). It is associated with gait abnormality, mild short stature, arthralgia, joint stiffness with limited mobility of the hips and irregular acetabula, and hip and knee pain. Coxa vara and mild spinal changes are also associated.","definition_xrefs":["Orphanet:166029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia, with severe proximal femoral dysplasia","secondary_identifiers":["ICD10CM:Q77.3","GARD:17015","MEDGEN:324484","MESH:C563736","UMLS:C1836315","OMIM:609324"],"synonyms":[{"name":"epiphyseal dysplasia, multiple, with severe proximal femoral dysplasia","type":"related"}],"termid":"MONDO:0012253","xrefs":{"Monarch":{"xref_id":"0012253"}}}


id: PBO:0029987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_glycosylation","termid":"PBO:0029987"}


id: GO:0110045
data:
  {"annotated_genes":["SJAG_01311","SJAG_00457","SJAG_03048","SJAG_04813","SJAG_02723","SJAG_02404","SJAG_03371"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101852,103926,105280,105438,106115,108724,117801],"is_not":false,"summary":null,"term":"GO:0110045"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["GOC:al","PMID:17674143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0110044"},{"relation_name":"negatively_regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_01311":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_04813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110045","terms_by_termid":{"GO:0110045":null}}


id: PBO:0084543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PAK family of serine/threonine protein kinases; similar to Ste20p; involved in down-regulation of sterol uptake; proposed to be a downstream effector of Cdc42p during polarized growth; SKM1 has a paralog, CLA4, that arose from the whole genome duplication","termid":"PBO:0084543"}


id: PBO:0049471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme A pseudogene 1","termid":"PBO:0049471"}


id: PR:O74776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial ribosome-associated GTPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome-associated GTPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.04c","secondary_identifiers":["UniProtKB:O74776"],"synonyms":[{"name":"SPBC25B2.04c","type":"related"},{"name":"Spom972h-MTG1","type":"exact"}],"termid":"PR:O74776"}


id: PR:O14460
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23115:SF4","OMA:SCHPO04354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.01c","secondary_identifiers":["UniProtKB:O14460"],"synonyms":[{"name":"EF-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EEF2","type":"exact"}],"termid":"PR:O14460"}


id: FYPO:0004772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular histidine level","termid":"FYPO:0001567"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased vacuolar histidine level","synonyms":[{"name":"increased level of histidine in vacuole","type":"exact"},{"name":"increased vacuolar L-histidine level","type":"exact"},{"name":"increased vacuolar histidine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar histidine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004772"}


