# terms

id: MONDO:1011341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Omphalitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalitis, non-human animal","termid":"MONDO:1011341","xrefs":{"Monarch":{"xref_id":"1011341"}}}


id: PBO:0085797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; conserved among S. cerevisiae strains, not conserved in closely related Saccharomyces species; protein detected via large-scale protein-protein interaction studies and enrichment-based proteogenomics; YJL199C is not an essential gene","termid":"PBO:0085797"}


id: PBO:0089995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-diacylglycerol acyltransferase Plh1/Lro1","termid":"PBO:0089995"}


id: PBO:0084813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant has a respiratory growth defect and displays reduced peroxide-induced mitochondrial ROS; partially overlaps the verified gene MRPL51/YPR100W","termid":"PBO:0084813"}


id: MONDO:0022642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoid tumor that occurs during childhood.","definition_xrefs":["NCIT:C118810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood carcinoid tumor","secondary_identifiers":["MEDGEN:859267","GARD:9315","UMLS:C3899673"],"synonyms":[{"name":"carcinoid tumor (disease) of childhood","type":"exact"},{"name":"carcinoid tumor childhood","type":"related"},{"name":"carcinoid tumour (disease) of childhood","type":"exact"},{"name":"carcinoid tumour childhood","type":"related"},{"name":"childhood carcinoid tumor","type":"exact"},{"name":"childhood carcinoid tumor (disease)","type":"exact"},{"name":"childhood carcinoid tumour (disease)","type":"exact"},{"name":"paediatric carcinoid tumour (disease)","type":"exact"},{"name":"pediatric carcinoid tumor (disease)","type":"exact"}],"termid":"MONDO:0022642","xrefs":{"Monarch":{"xref_id":"0022642"}}}


id: PBO:0003051
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains CCAAT element","termid":"PBO:0003051"}


id: PBO:0076251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUZ12 pseudogene 2","termid":"PBO:0076251"}


id: MONDO:1012162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital melanoma, non-human animal","termid":"MONDO:1011811"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital melanoma, pig","secondary_identifiers":["OMIA:000634-9823"],"termid":"MONDO:1012162","xrefs":{"Monarch":{"xref_id":"1012162"}}}


id: PBO:0040801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member e23","termid":"PBO:0040801"}


id: PBO:0034807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rei1 (predicted)","termid":"PBO:0034807"}


id: PBO:0034187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_orthology_relationship_with","termid":"PBO:0034187"}


id: PBO:0086891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane protein involved in export of ammonia; ammonia is a starvation signal that promotes cell death in aging colonies; phosphorylated in mitochondria; member of the TC 9.B.33 YaaH family; homolog of Y. lipolytica Gpr1p; ATO2 has a paralog, ADY2, that arose from the whole genome duplication","termid":"PBO:0086891"}


id: PBO:0056466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAST3 antisense RNA 1","termid":"PBO:0056466"}


id: GO:1903297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hypoxia-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of hypoxia-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of hypoxia-induced apoptosis","type":"related"},{"name":"regulation of hypoxic stress-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"}],"termid":"GO:1903297"}


id: PBO:0051289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-39","termid":"PBO:0051289"}


id: GO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dCMP, deoxycytidine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009177"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dCMP metabolic process","termid":"GO:0046063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dCMP biosynthetic process","synonyms":[{"name":"dCMP anabolism","type":"exact"},{"name":"dCMP biosynthesis","type":"exact"},{"name":"dCMP formation","type":"exact"},{"name":"dCMP synthesis","type":"exact"}],"termid":"GO:0046064"}


id: PBO:0044880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND6A antisense RNA 1","termid":"PBO:0044880"}


id: SO:0001044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nuclear pseudogene of either coding or non-coding mitochondria derived sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear_mt_pseudogene","secondary_identifiers":["http://en.wikipedia.org/wiki/Numt"],"synonyms":[{"name":"NUMT","type":"exact"},{"name":"nuclear mitochondrial pseudogene","type":"exact"},{"name":"nuclear mt pseudogene","type":"exact"}],"termid":"SO:0001044"}


id: PBO:0030181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population","termid":"PBO:0030181"}


id: FYPO:0002949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount a specific substance measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of substance in cell during G0","synonyms":[{"name":"increased accumulation of substance in cell during G0","type":"related"},{"name":"increased level of substance in cell during cell quiescence","type":"exact"},{"name":"increased level of substance in cell during quiescence","type":"exact"},{"name":"increased substance level during G0","type":"exact"}],"termid":"FYPO:0002949"}


id: MONDO:0017924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by progressive calcification of the brain and spinal cord, growth retardation, psychomotor anomalies, deafness and anemia. Renal tubular acidosis was found in one patient. To date, this syndrome has been described in only two patients from one family.","definition_xrefs":["Orphanet:3240"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system calcification-deafness-tubular acidosis-anemia syndrome","secondary_identifiers":["UMLS:C4512024","GARD:18789","MEDGEN:1384620"],"synonyms":[{"name":"Yoshimura-Takeshita syndrome","type":"exact"}],"termid":"MONDO:0017924","xrefs":{"Monarch":{"xref_id":"0017924"}}}


id: GO:1990931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative demethylation of N6-methyladenosine RNA, with concomitant decarboxylation of 2-oxoglutarate and releases oxidized methyl group on N6-methyladenosine as formaldehyde.","definition_xrefs":["PMID:26458103","PMID:22002720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidative RNA demethylase activity","termid":"GO:0035515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"mRNA N6-methyladenosine dioxygenase activity","secondary_identifiers":["EC:1.14.11.53","RHEA:49520"],"synonyms":[{"name":"RNA N6-methyladenosine dioxygenase activity","type":"related"},{"name":"mRNA N(6)-methyladenine demethylase","type":"exact"},{"name":"mRNA N(6)-methyladenosine dioxygenase activity","type":"exact"}],"termid":"GO:1990931"}


id: PBO:0004729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial threonine ammonia-lyase (predicted)","termid":"PBO:0004729"}


id: PBO:0043934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytotoxic and regulatory T cell molecule","termid":"PBO:0043934"}


id: GO:0004119
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115828],"is_not":false,"summary":null,"term":"GO:0004119"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is decreased in the presence of cGMP.","definition_xrefs":["PMID:35216259","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3',5'-cGMP-inhibited cyclic-nucleotide phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0004119","terms_by_termid":{"GO:0004119":null}}


id: FYPO:0004524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad54 (also called Rhp54) accumulates is lower than normal during a cellular response to doxorubicin.","definition_xrefs":["PMID:25701403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of Rad54 foci during cellular response to doxorubicin","synonyms":[{"name":"decreased number of Rad54 foci during cellular response to doxorubicin during mitotic cell cycle","type":"related"},{"name":"decreased number of Rad54 foci during cellular response to doxorubicin during vegetative growth","type":"exact"},{"name":"decreased number of Rhp54 foci during cellular response to doxorubicin","type":"exact"},{"name":"reduced number of Rad54 foci during cellular response to doxorubicin","type":"exact"}],"termid":"FYPO:0004524"}


id: PBO:0080558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 2 pseudogene 1","termid":"PBO:0080558"}


id: FYPO:0001069
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118756,118757,118758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more mitotic cell cycle phases is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of cell cycle phase","termid":"FYPO:0000408"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle phase","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01956","SJAG_03575"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased duration of mitotic cell cycle phase during vegetative growth","type":"exact"},{"name":"prolonged mitotic cell cycle phase","type":"exact"}],"termid":"FYPO:0001069","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: GO:0071932
data:
  {"annotated_genes":["SJAG_04183","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103640,111966],"is_not":false,"summary":null,"term":"GO:0071932"}]},"cv_name":"biological_process","definition":"Replication fork processing that involves the unwinding of blocked forks to form four-stranded structures resembling Holliday junctions, which are subsequently resolved.","definition_xrefs":["PMID:19406929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork processing","termid":"GO:0031297"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03780":null,"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"replication fork reversal","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071932","terms_by_termid":{"GO:0071932":null}}


id: MONDO:0004312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the suprasellar region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suprasellar meningioma","secondary_identifiers":["DOID:7634","MEDGEN:234911","UMLS:C1336535","NCIT:C6776"],"synonyms":[{"name":"meningioma (disease) of sella turcica","type":"exact"},{"name":"sella turcica meningioma (disease)","type":"exact"}],"termid":"MONDO:0004312","xrefs":{"Monarch":{"xref_id":"0004312"}}}


id: PBO:0081515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 423","termid":"PBO:0081515"}


id: PBO:0049751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxycarboxylic acid receptor 1","termid":"PBO:0049751"}


id: PBO:0076944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferrin receptor 2","termid":"PBO:0076944"}


id: GO:2000359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of binding of sperm to the zona pellucida.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"binding of sperm to zona pellucida","termid":"GO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of binding of sperm to zona pellucida","synonyms":[{"name":"regulation of ZPG binding","type":"related"}],"termid":"GO:2000359"}


id: PBO:0088332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin family protein, implicated in sulfur cluster assembly","termid":"PBO:0088332"}


id: GO:0043318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of cytotoxic T cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated cytotoxicity","termid":"GO:0001915"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of cytotoxic T cell degranulation","termid":"GO:0043317"},{"relation_name":"negatively_regulates","term_name":"cytotoxic T cell degranulation","termid":"GO:0043316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytotoxic T cell degranulation","synonyms":[{"name":"down regulation of cytotoxic T cell degranulation","type":"exact"},{"name":"down-regulation of cytotoxic T cell degranulation","type":"exact"},{"name":"downregulation of cytotoxic T cell degranulation","type":"exact"},{"name":"inhibition of cytotoxic T cell degranulation","type":"narrow"},{"name":"negative regulation of cytotoxic T cell granule exocytosis","type":"exact"},{"name":"negative regulation of cytotoxic T lymphocyte degranulation","type":"exact"},{"name":"negative regulation of cytotoxic T lymphocyte granule exocytosis","type":"exact"},{"name":"negative regulation of cytotoxic T-cell degranulation","type":"exact"},{"name":"negative regulation of cytotoxic T-cell granule exocytosis","type":"exact"},{"name":"negative regulation of cytotoxic T-lymphocyte degranulation","type":"exact"},{"name":"negative regulation of cytotoxic T-lymphocyte granule exocytosis","type":"exact"}],"termid":"GO:0043318"}


id: PBO:0070785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 15","termid":"PBO:0070785"}


id: MONDO:0019400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular seminomatous germ cell tumor (obsolete MONDO:0019400)","termid":"MONDO:0019400","xrefs":{"Monarch":{"xref_id":"0019400"}}}


id: PBO:0004940
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of PIm","termid":"PBO:0004940"}


id: GO:0005188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete larval serum protein (sensu Insecta) (obsolete GO:0005188)","synonyms":[{"name":"arylphorin","type":"narrow"},{"name":"larval serum protein (sensu Insecta)","type":"exact"}],"termid":"GO:0005188"}


id: PBO:0053515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 504","termid":"PBO:0053515"}


id: GO:0071230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"cellular response to acid chemical","termid":"GO:0071229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amino acid stimulus","synonyms":[{"name":"cellular response to amino acid","type":"exact"}],"termid":"GO:0071230"}


id: GO:0072150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a juxtaglomerulus cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"juxtaglomerulus cell fate commitment","termid":"GO:0072150"}


id: MONDO:0010839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant congenital benign spinal muscular atrophy is a rare distal hereditary motor neuropathy, with a variable clinical phenotype, typically characterized by congenital, non-progressive, predominantly distal, lower limb muscle weakness and atrophy and congenital (or early-onset) flexion contractures of the hip, knee and ankle joints. Reduced or absent lower limb deep tendon reflexes, skeletal anomalies (bilateral talipes equinovarus, scoliosis, kyphoscoliosis, lumbar hyperlordisis), late ambulation, waddling gait, joint hyperlaxity and/or bladder and bowel dysfunction are usually also associated.","definition_xrefs":["Orphanet:1216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant 8","secondary_identifiers":["SCTID:763067000","GARD:1474","UMLS:C1838492","MEDGEN:373984","OMIM:600175","MESH:C563981","DOID:0111215"],"synonyms":[{"name":"HMN8","type":"related"},{"name":"autosomal dominant benign distal spinal muscular atrophy","type":"exact"},{"name":"autosomal dominant congenital benign spinal muscular atrophy","type":"exact"},{"name":"congenital benign spinal muscular atrophy with contractures","type":"exact"},{"name":"congenital nonprogressive spinal muscular atrophy","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type 8","type":"related"},{"name":"neuronopathy, distal hereditary motor, type VIII","type":"related"},{"name":"neuropathy, distal hereditary motor, type 8","type":"related"},{"name":"spinal muscular atrophy, congenital benign, with contractures","type":"related"},{"name":"spinal muscular atrophy, distal, congenital nonprogressive","type":"related"}],"termid":"MONDO:0010839","xrefs":{"Monarch":{"xref_id":"0010839"}}}


id: GO:0052478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the deposition of callose by the symbiont in its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont cell wall callose deposition (obsolete GO:0052478)","synonyms":[{"name":"negative regulation by organism of defense-related symbiont cell wall callose deposition","type":"exact"}],"termid":"GO:0052478"}


id: MONDO:0007041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Apert syndrome (AS) is a frequent form of acrocephalosyndactyly, a group of inherited congenital malformation disorders, characterized by craniosynostosis, midface hypoplasia, and finger and toe anomalies and/or syndactyly.","definition_xrefs":["Orphanet:87"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"acrocephalosyndactyly","termid":"MONDO:0019796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Apert syndrome","secondary_identifiers":["icd11.foundation:1962779847","NORD:793","NCIT:C99099","NANDO:1200667","UMLS:C0001193","MEDGEN:7858","MESH:D000168","GARD:5833","MedDRA:10002943","OMIM:101200","NANDO:2200844","SCTID:205258009"],"synonyms":[{"name":"ACS 1","type":"related"},{"name":"ACS 2","type":"related"},{"name":"ACS1","type":"exact"},{"name":"Apert syndrome","type":"exact"},{"name":"Apert-Crouzon disease","type":"related"},{"name":"Vogt Cephalodactyly","type":"related"},{"name":"acrocephalo-syndactyly type 1","type":"related"},{"name":"acrocephalosyndactyly type 1","type":"exact"},{"name":"acrocephalosyndactyly type I","type":"exact"},{"name":"acrocephalosyndactyly, type 1","type":"related"},{"name":"acrocephalosyndactyly, type 2","type":"related"},{"name":"syndactylic oxycephaly","type":"related"},{"name":"type I Acrocephalosyndactyly","type":"exact"}],"termid":"MONDO:0007041","xrefs":{"Monarch":{"xref_id":"0007041"}}}


id: GO:0120112
data:
  {"annotated_genes":["SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111818],"is_not":false,"summary":null,"term":"GO:0120112"}]},"cv_name":"biological_process","definition":"The directed movement of UDP-glucose from cytosol to endoplasmic reticulum.","definition_xrefs":["PMID:27587357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucose transmembrane transport","termid":"GO:0015786"},{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"UDP-glucose transmembrane transport into endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120112","terms_by_termid":{"GO:0120112":null}}


id: PBO:0070591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 57","termid":"PBO:0070591"}


id: PBO:0077401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 134","termid":"PBO:0077401"}


id: GO:0061760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An defense response against a fungus mediated through an innate immune response. An innate immune response is mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:dph","PMID:22470487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antifungal innate immune response","termid":"GO:0061760"}


id: PBO:0012274
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HAP2","termid":"PBO:0012274"}


id: PBO:0075043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-6","termid":"PBO:0075043"}


id: PBO:0044957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 4","termid":"PBO:0044957"}


id: GO:1990708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The associative learning process by which an animal learns and remembers an association between a neutral, unchanging environment and a putatively rewarding, internal state produced by a xenobiotic or drug.","definition_xrefs":["PMID:21549821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"associative learning","termid":"GO:0008306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conditioned place preference","termid":"GO:1990708"}


id: GO:0035091
data:
  {"annotated_genes":["SJAG_02657","SJAG_01722","SJAG_05245","SJAG_00663","SJAG_02852","SJAG_00117","SJAG_00173","SJAG_00115","SJAG_03405","SJAG_01382","SJAG_01945","SJAG_04960","SJAG_01564","SJAG_02248","SJAG_01783","SJAG_01309","SJAG_03721","SJAG_00971","SJAG_02989","SJAG_03851","SJAG_05179","SJAG_03250","SJAG_00368","SJAG_00053","SJAG_00970","SJAG_00907","SJAG_04221","SJAG_02392","SJAG_04010","SJAG_04077","SJAG_02468","SJAG_04963","SJAG_00638","SJAG_00821","SJAG_02587","SJAG_00118","SJAG_04219","SJAG_01519","SJAG_02912","SJAG_00152","SJAG_04024","SJAG_02166","SJAG_01769","SJAG_03170","SJAG_04275","SJAG_02492","SJAG_02728","SJAG_01516","SJAG_01143","SJAG_04644","SJAG_01135","SJAG_01324","SJAG_03756","SJAG_00314","SJAG_02572","SJAG_01748","SJAG_00216","SJAG_02613","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62471,89928,91799,92983,96958,98482,101209,103865,104446,106838,107095,108203,112309,114218,114648,115689,116995,117435,118453],"is_not":false,"summary":null,"term":"GO:0035091"},{"annotations":[107668,105493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005545"},{"annotations":[95363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901981"},{"annotations":[101915,87576,116906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005547"},{"annotations":[97109,98113,98828,99779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[99336,102918,114669,99202,91016,109103,108117,90094,95436,97110,98114,104308,109254,109453,111903,99337,99780,101204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032266"},{"annotations":[101260,101413,98791,114328,105495,87508,106064,116974,116482,118411,90263,101251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"},{"annotations":[99614,98223,98792,94014,101916,111944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070273"}]},"cv_name":"molecular_function","definition":"Binding to an inositol-containing glycerophospholipid, i.e. phosphatidylinositol (PtdIns) and its phosphorylated derivatives.","definition_xrefs":["ISBN:0198506732","PMID:11395417","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00115":null,"SJAG_00117":null,"SJAG_00118":null,"SJAG_00152":null,"SJAG_00173":null,"SJAG_00216":null,"SJAG_00314":null,"SJAG_00368":null,"SJAG_00638":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00907":null,"SJAG_00970":null,"SJAG_00971":null,"SJAG_01135":null,"SJAG_01143":null,"SJAG_01309":null,"SJAG_01324":null,"SJAG_01382":null,"SJAG_01516":null,"SJAG_01519":null,"SJAG_01564":null,"SJAG_01722":null,"SJAG_01748":null,"SJAG_01769":null,"SJAG_01783":null,"SJAG_01794":null,"SJAG_01945":null,"SJAG_02166":null,"SJAG_02248":null,"SJAG_02392":null,"SJAG_02468":null,"SJAG_02492":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02613":null,"SJAG_02657":null,"SJAG_02728":null,"SJAG_02852":null,"SJAG_02912":null,"SJAG_02989":null,"SJAG_03170":null,"SJAG_03250":null,"SJAG_03405":null,"SJAG_03721":null,"SJAG_03756":null,"SJAG_03851":null,"SJAG_04010":null,"SJAG_04024":null,"SJAG_04077":null,"SJAG_04219":null,"SJAG_04221":null,"SJAG_04275":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_04963":null,"SJAG_05179":null,"SJAG_05245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphoinositide binding","type":"exact"}],"termid":"GO:0035091","terms_by_termid":{"GO:0005545":null,"GO:0005546":null,"GO:0005547":null,"GO:0032266":null,"GO:0035091":null,"GO:0070273":null,"GO:0080025":null,"GO:1901981":null}}


id: MONDO:0054677
data:
  {"annotated_genes":["SJAG_03155","SJAG_03104"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84748,84749],"is_not":false,"summary":null,"term":"MONDO:0054677"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03104":null,"SJAG_03155":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 33","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1623699","NCIT:C174440","DOID:0111495","OMIM:617713","UMLS:C4540209"],"synonyms":[{"name":"COXPD33","type":"related"},{"name":"combined oxidative phosphorylation deficiency 33","type":"exact"}],"termid":"MONDO:0054677","terms_by_termid":{"MONDO:0054677":null},"xrefs":{"Monarch":{"xref_id":"0054677"}}}


id: GO:0097568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane bound, semi-organized microtubule array of unknown function found in Giardia species (trophozoite stage). It is located on the dorsal side of the trophozoite, slightly posterior to the ventral disc.","definition_xrefs":["PMID:5961344","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"median body","synonyms":[{"name":"parabasal body","type":"related"}],"termid":"GO:0097568"}


id: PBO:0003569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain, implicated in splicing (predicted)","termid":"PBO:0003569"}


id: GO:0033946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xyloglucan + H2O = xyloglucan oligosaccharides. This reaction is the endohydrolysis of (1->4)-beta-D-glucosidic linkages in xyloglucan.","definition_xrefs":["EC:3.2.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"xyloglucan-specific endo-beta-1,4-glucanase activity","secondary_identifiers":["MetaCyc:3.2.1.151-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan glucanohydrolase activity","type":"broad"},{"name":"XEG","type":"related"},{"name":"XH","type":"related"},{"name":"[(1->6)-beta-D-xylo]-(1->4)-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"xyloglucan endo-beta-1,4-glucanase activity","type":"related"},{"name":"xyloglucanase activity","type":"related"},{"name":"xyloglucanendohydrolase activity","type":"related"}],"termid":"GO:0033946"}


id: MONDO:0020199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete conjunctival vascular anomaly (obsolete MONDO:0020199)","secondary_identifiers":["Orphanet:98611"],"termid":"MONDO:0020199","xrefs":{"Monarch":{"xref_id":"0020199"}}}


id: GO:0070320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of an inwardly rectifying potassium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"inward rectifier potassium channel inhibitor activity","termid":"GO:0070320"}


id: GO:0010078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of root meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"},{"relation_name":"part_of","term_name":"root morphogenesis","termid":"GO:0010015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of root meristem identity","termid":"GO:0010078"}


id: PBO:0011962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"other","termid":"PBO:0011962"}


id: PBO:0070015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1312, pseudogene","termid":"PBO:0070015"}


id: PBO:0088452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein Pdp2","termid":"PBO:0088452"}


id: PBO:0051965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intersectin 1","termid":"PBO:0051965"}


id: PATO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's consisting of keratin.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinous","termid":"PATO:0002507"}


id: PBO:0068837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 75, pseudogene","termid":"PBO:0068837"}


id: PBO:0027519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_meiotic_interphase","termid":"PBO:0027519"}


id: PBO:0088890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine/serine/threonine phosphatase","termid":"PBO:0088890"}


id: PBO:0063127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARP11 antisense RNA 1","termid":"PBO:0063127"}


id: GO:0090513
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103320],"is_not":false,"summary":null,"term":"GO:0090513"}]},"cv_name":"biological_process","definition":"The directed movement of L-histidine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane import into vacuole","termid":"GO:0034490"},{"relation_name":"is_a","term_name":"L-histidine transmembrane transport","termid":"GO:0089709"},{"relation_name":"is_a","term_name":"L-histidine transport","termid":"GO:1902024"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"L-histidine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090457"],"synonyms":[{"name":"histidine transmembrane import into vacuole","type":"broad"},{"name":"vacuolar histidine import","type":"broad"}],"termid":"GO:0090513","terms_by_termid":{"GO:0090513":null}}


id: PBO:0046703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 3","termid":"PBO:0046703"}


id: MONDO:0033652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 17","secondary_identifiers":["UMLS:C5436718","DOID:0070502","GARD:16414","MEDGEN:1730423","OMIM:619061"],"synonyms":[{"name":"MC4DN17","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 17","type":"exact"}],"termid":"MONDO:0033652","xrefs":{"Monarch":{"xref_id":"0033652"}}}


id: MONDO:0007578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esterase B (obsolete MONDO:0007578)","secondary_identifiers":["MESH:C049262","OMIM:133260"],"synonyms":[{"name":"ESB","type":"related"},{"name":"esterase B","type":"exact"},{"name":"esterase type B","type":"exact"}],"termid":"MONDO:0007578","xrefs":{"Monarch":{"xref_id":"0007578"}}}


id: PBO:0070112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 26 pseudogene","termid":"PBO:0070112"}


id: PBO:0039571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD65 antisense RNA 1","termid":"PBO:0039571"}


id: MONDO:0015031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extraneural perineurioma is a rare tumor of cranial and spinal nerves arising from peripheral nerve sheet and composed exclusively or predominantly of cells showing perineurial differentiation. It presents as a well-circumscribed, rarely encapsulated mass, not associated with a recognizable nerve, most commonly arising in the dermis and subcutis of the extremities or trunk, or, rarely, in deep soft tissue or skin (e.g., in the stomach, kidney, pancreas, maxillary sinus, mandible, bronchial tree and the face). The clinical presentation depends on the localization.","definition_xrefs":["Orphanet:100002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perineurioma","termid":"MONDO:0019404"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extraneural perineurioma","secondary_identifiers":["SCTID:768926005","UMLS:C4708595","GARD:19730","icd11.foundation:691853283","MEDGEN:1643216","NCIT:C6912"],"synonyms":[{"name":"soft tissue perineurioma","type":"exact"}],"termid":"MONDO:0015031","xrefs":{"Monarch":{"xref_id":"0015031"}}}


id: GO:1900995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ubiquinone-6. Ubiquinone-6 is a ubiquinone compound having a (2E,6E,10E,14E,18E)-3,7,11,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaen-1-yl substituent at position 2.","definition_xrefs":["GOC:al","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone binding","termid":"GO:0048039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ubiquinone-6 binding","termid":"GO:1900995"}


id: PBO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga2","termid":"PBO:0015665"}


id: GO:0033103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are transferred into the extracellular milieu or directly into host cells by the type VI secretion system. Proteins secreted by this system do not require an N-terminal signal sequence.","definition_xrefs":["GOC:mlg","PMID:16432199","PMID:16763151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type VI secretion system","synonyms":[{"name":"protein secretion by the T6SS","type":"exact"},{"name":"protein secretion by the type VI protein secretion system","type":"exact"},{"name":"type VI protein secretion system","type":"exact"}],"termid":"GO:0033103"}


id: MONDO:0958300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A round cell sarcoma with EWSR1-non-ETS fusion that is characterized by the presence of EWSR1-PATZ1 gene fusion.","definition_xrefs":["DOID:0081409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"round cell sarcoma with EWSR1-non-ETS fusion","termid":"MONDO:0958160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"round cell sarcoma with EWSR1-PATZ1 gene fusion","secondary_identifiers":["MEDGEN:1791494","UMLS:C5555053"],"termid":"MONDO:0958300","xrefs":{"Monarch":{"xref_id":"0958300"}}}


id: PBO:0049845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 6","termid":"PBO:0049845"}


id: PBO:0066789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 88","termid":"PBO:0066789"}


id: MONDO:0006790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A regressive change of teeth characterized by excessive development of secondary cementum on the tooth surface. It may occur on any part of the root, but the apical two-thirds are most commonly affected. (Dorland, 27th ed)","definition_xrefs":["MESH:D006936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypercementosis","secondary_identifiers":["ICD10CM:K03.4","ICD9:521.5","DOID:12733","MEDGEN:9360","EFO:1000970","UMLS:C0020441","MedDRA:10020596","SCTID:78537008"],"synonyms":[{"name":"cementation hyperplasia","type":"exact"}],"termid":"MONDO:0006790","xrefs":{"Monarch":{"xref_id":"0006790"}}}


id: MOD:01458
data:
  {"annotated_genes":["SJAG_02522","SJAG_00733"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80001,80290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an acetyl group.","definition_xrefs":["OMSSA:10","Unimod:1#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylated residue","termid":"MOD:00408"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00733":null,"SJAG_02522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"alpha-amino acetylated residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"N2AcRes","type":"exact"},{"name":"ntermacetyl","type":"exact"}],"termid":"MOD:01458","terms_by_termid":{"MOD:00050":null}}


id: MONDO:0005208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A amelanotic melanoma that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelanotic melanoma","termid":"MONDO:0002971"},{"relation_name":"is_a","term_name":"cutaneous melanoma","termid":"MONDO:0005012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"amelanotic skin melanoma","secondary_identifiers":["DOID:10054","EFO:0002894","Wikipedia:Amelanotic_melanoma","MEDGEN:91149","NCIT:C4633","UMLS:C0349515"],"synonyms":[{"name":"amelanotic cutaneous (skin) melanoma","type":"exact"},{"name":"amelanotic malignant melanoma (of skin)","type":"exact"},{"name":"amelanotic malignant melanoma of skin","type":"exact"},{"name":"amelanotic malignant melanoma of the skin","type":"exact"},{"name":"amelanotic malignant skin melanoma","type":"exact"},{"name":"amelanotic melanoma of skin","type":"exact"},{"name":"amelanotic melanoma of the skin","type":"exact"},{"name":"amelanotic melanoma of zone of skin","type":"exact"},{"name":"amelanotic skin melanoma","type":"exact"},{"name":"skin amelanotic malignant melanoma","type":"exact"},{"name":"skin amelanotic melanoma","type":"exact"},{"name":"zone of skin amelanotic melanoma","type":"exact"}],"termid":"MONDO:0005208","xrefs":{"Monarch":{"xref_id":"0005208"}}}


id: GO:1904737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation using acyl-CoA dehydrogenase.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25416781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid beta-oxidation","termid":"GO:0032000"},{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:1904735"},{"relation_name":"positively_regulates","term_name":"fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:0033539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","synonyms":[{"name":"activation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"narrow"},{"name":"up regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"up-regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"upregulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"}],"termid":"GO:1904737"}


id: GO:2000749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of rDNA heterochromatin formation.","definition_xrefs":["PMID:10899127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterochromatin formation","termid":"GO:0031453"},{"relation_name":"is_a","term_name":"regulation of rDNA heterochromatin formation","termid":"GO:0061187"},{"relation_name":"positively_regulates","term_name":"rDNA heterochromatin formation","termid":"GO:0000183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of rDNA heterochromatin formation","synonyms":[{"name":"positive regulation of chromatin silencing at rDNA","type":"broad"},{"name":"positive regulation of chromatin silencing at ribosomal DNA","type":"broad"},{"name":"positive regulation of heterochromatic silencing at rDNA","type":"broad"},{"name":"positive regulation of rDNA chromatin silencing","type":"broad"},{"name":"positive regulation of rDNA heterochromatin assembly","type":"exact"},{"name":"positive regulation of ribosomal DNA heterochromatin assembly","type":"exact"}],"termid":"GO:2000749"}


id: PBO:0070304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 10","termid":"PBO:0070304"}


id: MONDO:0020083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid hemopathy","termid":"MONDO:0015757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"immunodeficiency-associated lymphoproliferative disease","secondary_identifiers":["GARD:19443","MEDGEN:1843142","icd11.foundation:1678636940","Orphanet:98290","UMLS:C5681530"],"termid":"MONDO:0020083","xrefs":{"Monarch":{"xref_id":"0020083"}}}


id: PBO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Brr2 (predicted)","termid":"PBO:0000990"}


id: GO:0042057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to transforming growth factor beta receptor and anchors it to a particular subcellular location.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor anchoring activity (obsolete GO:0042057)","synonyms":[{"name":"TGF-beta receptor anchoring activity","type":"exact"},{"name":"TGFbeta receptor anchoring activity","type":"exact"},{"name":"transforming growth factor beta receptor anchor activity","type":"exact"},{"name":"transforming growth factor beta receptor anchoring activity","type":"exact"}],"termid":"GO:0042057"}


id: MONDO:0006208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serous adenocarcinoma that arises from the fallopian tube. It is usually a high grade invasive adenocarcinoma.","definition_xrefs":["NCIT:C40099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube adenocarcinoma","termid":"MONDO:0002746"},{"relation_name":"is_a","term_name":"serous adenocarcinoma","termid":"MONDO:0005278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube serous adenocarcinoma","secondary_identifiers":["EFO:1000253","DOID:5598","UMLS:C1517124","MEDGEN:274490"],"synonyms":[{"name":"fallopian tube serous adenocarcinoma","type":"exact"}],"termid":"MONDO:0006208","xrefs":{"Monarch":{"xref_id":"0006208"}}}


id: FYPO:0003375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ubiquinone binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal ubiquinone binding","synonyms":[{"name":"normal coenzyme Q binding","type":"exact"}],"termid":"FYPO:0003375"}


id: GO:0018168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of the chromophore phycoerythrobilin to phycoerythrocyanin via S-phycoerythrobilin-L-cysteine.","definition_xrefs":["RESID:AA0132"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-phycoerythrobilin linkage via S-phycoerythrobilin-L-cysteine (obsolete GO:0018168)","termid":"GO:0018168"}


id: FYPO:0002312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to ionizing radiation during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to ionizing radiation","type":"exact"},{"name":"resistance to gamma irradiation during vegetative growth","type":"narrow"},{"name":"resistance to gamma radiation during vegetative growth","type":"narrow"},{"name":"resistance to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"resistant to IR during vegetative growth","type":"exact"},{"name":"resistant to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0002312"}


id: MONDO:1012966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital disorder of glycosylation that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycosylation, non-human animal","termid":"MONDO:1011314"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital disorder of glycosylation, non-human animal","termid":"MONDO:1012966","xrefs":{"Monarch":{"xref_id":"1012966"}}}


id: FYPO:0003043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the Mei2 nuclear dot is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to Mei2 nuclear dot","termid":"FYPO:0002958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to Mei2 nuclear dot","synonyms":[{"name":"increased protein localisation to Mei2 nuclear dot","type":"exact"},{"name":"increased protein localization to meiRNA nuclear dot","type":"related"}],"termid":"FYPO:0003043"}


id: GO:0090010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the formation of the primitive streak.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in primitive streak formation (obsolete GO:0090010)","synonyms":[{"name":"TGFbeta signaling pathway involved in primitive streak formation","type":"related"},{"name":"transforming growth factor beta receptor signalling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090010"}


id: PBO:0038401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-helper_property_(not_for_use_in_curation)","termid":"PBO:0038401"}


id: GO:0018890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanamide, NCNH2, a cyanide compound which has been used as a fertilizer, defoliant and in many manufacturing processes. It often occurs as the calcium salt, sometimes also referred to as cyanamide. The citrated calcium salt is used in the treatment of alcoholism.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanamide metabolic process","secondary_identifiers":["UM-BBD_pathwayID:cnm"],"synonyms":[{"name":"cyanamide metabolism","type":"exact"}],"termid":"GO:0018890"}


id: PR:Q9HE02
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med13 gene.","definition_xrefs":["UniProtKB:Q9HE02","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.02c","synonyms":[{"name":"Spom972h-med13","type":"exact"},{"name":"mediator complex subunit 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B srb9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE02"}


id: MONDO:0009154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypothyroidism, congenital, nongoitrous in which the cause of the disease is a mutation in the NKX2-5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism, congenital, nongoitrous","termid":"MONDO:0000045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothyroidism, congenital, nongoitrous, 5","secondary_identifiers":["DOID:0070125","GARD:15165","MEDGEN:388687","OMIM:225250","UMLS:C2673630","MESH:C567123"],"synonyms":[{"name":"CHNG5","type":"exact"},{"name":"NKX2-5 hypothyroidism, congenital, nongoitrous","type":"exact"},{"name":"congenital nongoitrous hypothyroidism 5","type":"related"},{"name":"hypothyroidism, congenital nongoitrous, 5","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous caused by mutation in NKX2-5","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, 5","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, type 5","type":"exact"}],"termid":"MONDO:0009154","xrefs":{"Monarch":{"xref_id":"0009154"}}}


id: PBO:0051171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-57 (pseudogene)","termid":"PBO:0051171"}


id: GO:0021553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the olfactory nerve over time, from its formation to the mature structure. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","ISBN:0838580343","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve development","synonyms":[{"name":"CN 1 development","type":"related"},{"name":"cranial nerve 1 development","type":"exact"},{"name":"cranial nerve I development","type":"exact"}],"termid":"GO:0021553"}


id: PR:P87242
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An HD domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain-containing protein C4G3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.17","secondary_identifiers":["UniProtKB:P87242"],"synonyms":[{"name":"Spom972h-HDDC2","type":"exact"}],"termid":"PR:P87242"}


id: MOD:01184
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two selenium atoms for two sulfur atoms in L-cystine to form L-selenocystine.","definition_xrefs":["PubMed:17715293","RESID:AA0437#CYS2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium substitution for sulfur","termid":"MOD:00007"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-selenocystine (selenium disubstituted L-cystine)","synonyms":[{"name":"(R,R)-3,3'-diselane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-diselenobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-diselenobisalanine","type":"exact"},{"name":"3,3'-diselenodialanine","type":"exact"},{"name":"CROSSLNK Selenocystine (Sec-Sec)","type":"exact"},{"name":"L-selenocystine","type":"exact"},{"name":"Se2(S2)Cys2","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldiselenide","type":"exact"},{"name":"beta,beta'-diselenodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-diselenide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)diselenide","type":"exact"},{"name":"diselenocysteine","type":"exact"},{"name":"selenium cystine","type":"exact"}],"termid":"MOD:01184"}


id: GO:0072070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the loop of Henle over time, from its formation to the mature structure. The loop of Henle is a nephron tubule that connects the proximal convoluted tubule to the distal convoluted tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"loop of Henle development","secondary_identifiers":["GO:0072018"],"synonyms":[{"name":"intermediate tubule development","type":"exact"}],"termid":"GO:0072070"}


id: GO:1905629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serotonin biosynthetic process.","definition_xrefs":["PMID:25642596","GO_REF:0000058","GOC:PARL","GOC:pad","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of serotonin biosynthetic process","termid":"GO:1905627"},{"relation_name":"positively_regulates","term_name":"serotonin biosynthetic process","termid":"GO:0042427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serotonin biosynthetic process","synonyms":[{"name":"activation of serotonin anabolism","type":"narrow"},{"name":"activation of serotonin biosynthesis","type":"narrow"},{"name":"activation of serotonin biosynthetic process","type":"narrow"},{"name":"activation of serotonin formation","type":"narrow"},{"name":"activation of serotonin synthesis","type":"narrow"},{"name":"positive regulation of serotonin anabolism","type":"exact"},{"name":"positive regulation of serotonin biosynthesis","type":"exact"},{"name":"positive regulation of serotonin formation","type":"exact"},{"name":"positive regulation of serotonin synthesis","type":"exact"},{"name":"up regulation of serotonin anabolism","type":"exact"},{"name":"up regulation of serotonin biosynthesis","type":"exact"},{"name":"up regulation of serotonin biosynthetic process","type":"exact"},{"name":"up regulation of serotonin formation","type":"exact"},{"name":"up regulation of serotonin synthesis","type":"exact"},{"name":"up-regulation of serotonin anabolism","type":"exact"},{"name":"up-regulation of serotonin biosynthesis","type":"exact"},{"name":"up-regulation of serotonin biosynthetic process","type":"exact"},{"name":"up-regulation of serotonin formation","type":"exact"},{"name":"up-regulation of serotonin synthesis","type":"exact"},{"name":"upregulation of serotonin anabolism","type":"exact"},{"name":"upregulation of serotonin biosynthesis","type":"exact"},{"name":"upregulation of serotonin biosynthetic process","type":"exact"},{"name":"upregulation of serotonin formation","type":"exact"},{"name":"upregulation of serotonin synthesis","type":"exact"}],"termid":"GO:1905629"}


id: PBO:0050984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 56","termid":"PBO:0050984"}


id: MONDO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tenosynovitis","termid":"MONDO:0004855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"tenosynovitis of foot and ankle","secondary_identifiers":["DOID:312","ICD9:727.06","MEDGEN:1843483","UMLS:C0158331"],"termid":"MONDO:0002517","xrefs":{"Monarch":{"xref_id":"0002517"}}}


id: FYPO:0002621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of malate dehydrogenase (decarboxylating) (NAD+) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"abnormal 'malic' enzyme activity","type":"related"},{"name":"abnormal (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"abnormal NAD-linked malic enzyme activity","type":"related"},{"name":"abnormal NAD-malic enzyme activity","type":"broad"},{"name":"abnormal NAD-specific malic enzyme activity","type":"related"},{"name":"abnormal malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"FYPO:0002621"}


id: PATO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's length being notably lower than its width.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shortened","termid":"PATO:0002364"}


id: PBO:0046464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Era like 12S mitochondrial rRNA chaperone 1","termid":"PBO:0046464"}


id: GO:0005652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane.","definition_xrefs":["ISBN:0198506732","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear periphery","termid":"GO:0034399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0034399"}],"interesting_parent_ids":["GO:0034399","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear lamina","secondary_identifiers":["NIF_Subcellular:sao1455996588","Wikipedia:Nuclear_lamina"],"termid":"GO:0005652"}


id: PBO:0058544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6090","termid":"PBO:0058544"}


id: PBO:0034591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore_during_vegetative_growth","termid":"PBO:0034591"}


id: SO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in 3 prime overhangs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_sticky_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"three prime sticky end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001976"}


id: PBO:0004589
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIP box","termid":"PBO:0004589"}


id: FYPO:0004008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of ribosomal DNA into ribosomal RNA occurs to a normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000294","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal rRNA transcription","synonyms":[{"name":"normal rDNA transcription","type":"exact"},{"name":"normal rRNA transcription during mitotic cell cycle","type":"related"},{"name":"normal rRNA transcription during vegetative growth","type":"exact"},{"name":"normal ribosomal RNA transcription","type":"exact"}],"termid":"FYPO:0004008"}


id: PBO:0079238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 12","termid":"PBO:0079238"}


id: MOD:00060
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N-acetyl-L-serine.","definition_xrefs":["PubMed:15350136","PubMed:11999733","PubMed:2106685","PubMed:6997045","PubMed:1880797","PubMed:11857757","PubMed:12175151","PubMed:14730666","RESID:AA0051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated L-serine","termid":"MOD:00647"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-serine","synonyms":[{"name":"(2S)-2-acetamido-3-hydroxypropanoic acid","type":"exact"},{"name":"2-acetylamino-3-hydroxypropanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-hydroxypropanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetylserine","type":"exact"},{"name":"N-acetyl-L-serine","type":"exact"},{"name":"N-acetylated L-serine","type":"exact"},{"name":"N-acetylserine","type":"exact"},{"name":"NAcSer","type":"exact"}],"termid":"MOD:00060"}


id: MONDO:0014191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any catecholaminergic polymorphic ventricular tachycardia in which the cause of the disease is a mutation in the TRDN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholaminergic polymorphic ventricular tachycardia","termid":"MONDO:0017990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"catecholaminergic polymorphic ventricular tachycardia 5","secondary_identifiers":["MEDGEN:815866","OMIM:615441","GARD:15967","UMLS:C3809536","DOID:0060679","ICD10CM:I47.2"],"synonyms":[{"name":"CPVT5","type":"related"},{"name":"CVPT5","type":"exact"},{"name":"TRDN catecholaminergic polymorphic ventricular tachycardia","type":"exact"},{"name":"cardiac arrhythmia syndrome, with or without skeletal muscle weakness","type":"exact"},{"name":"catecholaminergic polymorphic ventricular tachycardia 5","type":"exact"},{"name":"catecholaminergic polymorphic ventricular tachycardia caused by mutation in TRDN","type":"exact"},{"name":"catecholaminergic polymorphic ventricular tachycardia type 5","type":"exact"},{"name":"ventricular tachycardia, catecholaminergic polymorphic, 5, with or without muscle weakness","type":"related"}],"termid":"MONDO:0014191","xrefs":{"Monarch":{"xref_id":"0014191"}}}


id: MONDO:0000560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia type 4 (obsolete MONDO:0000560)","termid":"MONDO:0000560","xrefs":{"Monarch":{"xref_id":"0000560"}}}


id: GO:0050619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3Z)-phytochromobilin + oxidized ferredoxin = biliverdin IXa + reduced ferredoxin.","definition_xrefs":["EC:1.3.7.4","MetaCyc:1.3.7.4-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phytochromobilin:ferredoxin oxidoreductase activity","secondary_identifiers":["RHEA:16377"],"synonyms":[{"name":"(3Z)-phytochromobilin:ferredoxin oxidoreductase activity","type":"related"},{"name":"HY2","type":"related"},{"name":"P-Phi-B synthase activity","type":"related"},{"name":"PFB synthase activity","type":"related"},{"name":"PPhiB synthase activity","type":"related"},{"name":"phytochromobilin synthase activity","type":"related"}],"termid":"GO:0050619"}


id: MONDO:0008319
data:
  {"annotated_genes":["SJAG_01841"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84682],"is_not":false,"summary":null,"term":"MONDO:0008319"}]},"cv_name":"mondo","definition":"Erythropoietic protoporphyria caused by a compound heterozygous or homozygous mutation in the gene encoding ferrochelatase (FECH) on chromosome 18q21.","definition_xrefs":["OMIM:177000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal erythropoietic protoporphyria","termid":"MONDO:0019263"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005093","MONDO:0019142","MONDO:0005066"],"is_obsolete":false,"name":"protoporphyria, erythropoietic, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4692546","NANDO:1200815","NANDO:2201266","NCIT:C84698","MEDGEN:1643471"],"synonyms":[{"name":"EPP","type":"related"},{"name":"EPP1","type":"exact"},{"name":"erythrohepatic protoporphyria","type":"related"},{"name":"erythropoietic protoporphyria","type":"broad"},{"name":"ferrochelatase deficiency","type":"exact"},{"name":"heme synthetase deficiency","type":"exact"},{"name":"protoporphyria, erythropoietic","type":"broad"},{"name":"protoporphyria, erythropoietic, 1","type":"exact"}],"termid":"MONDO:0008319","terms_by_termid":{"MONDO:0008319":null},"xrefs":{"Monarch":{"xref_id":"0008319"}}}


id: PBO:0063150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POZ/BTB and AT hook containing zinc finger 1","termid":"PBO:0063150"}


id: GO:0106118
data:
  {"annotated_genes":["SJAG_04018","SJAG_01307","SJAG_02104","SJAG_02044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[109311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[109312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[88079,88080,105310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a sterol biosynthetic process.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:16459310","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"regulates","term_name":"sterol biosynthetic process","termid":"GO:0016126"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of sterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106118","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: GO:1903222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which quinolinic acid is transported across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:23457190","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"quinolinic acid transmembrane transport","termid":"GO:1903222"}


id: MONDO:0021674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A post-infectious disorder that follows viral infection but is distinct from the viral infection itself and its usual manifestations.","direct_ancestors":[{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-viral disorder","secondary_identifiers":["MEDGEN:688821","SCTID:123948009","ICD9:139.8","UMLS:C1264605"],"synonyms":[{"name":"sequela of viral disease","type":"exact"}],"termid":"MONDO:0021674","xrefs":{"Monarch":{"xref_id":"0021674"}}}


id: SO:0000700
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A comment about the sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"remark","termid":"SO:0000700"}


id: MONDO:0003026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiosarcoma that is located in the gallbladder.","direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder sarcoma","termid":"MONDO:0002857"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder angiosarcoma","secondary_identifiers":["UMLS:C1333742","MEDGEN:232222","DOID:4513","NCIT:C5840"],"synonyms":[{"name":"angiosarcoma (disease) of gall bladder","type":"exact"},{"name":"angiosarcoma of gallbladder","type":"exact"},{"name":"angiosarcoma of the gallbladder","type":"exact"},{"name":"gall bladder angiosarcoma (disease)","type":"exact"},{"name":"gallbladder angiosarcoma","type":"exact"},{"name":"gallbladder hemangiosarcoma","type":"exact"},{"name":"hemangiosarcoma of gallbladder","type":"exact"},{"name":"hemangiosarcoma of the gallbladder","type":"exact"}],"termid":"MONDO:0003026","xrefs":{"Monarch":{"xref_id":"0003026"}}}


id: FYPO:0008006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton phenotype observed during mitotic interphase in which the microtubule minus ends are dynamic (they alternate between growth and shrinkage phases).","definition_xrefs":["PMID:21444751","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"dynamic microtubule minus ends in interphase bundles","synonyms":[{"name":"dynamic microtubule minus ends during interphase","type":"broad"},{"name":"uncapped microtubule minus ends during interphase","type":"broad"},{"name":"uncapped microtubule minus ends in interphase bundles","type":"broad"}],"termid":"FYPO:0008006"}


id: PBO:0049881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 2","termid":"PBO:0049881"}


id: GO:0071239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a streptomycin stimulus. Streptomycin is a commonly used antibiotic in cell culture media which acts only on prokaryotes and blocks transition from initiation complex to chain elongating ribosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to streptomycin","termid":"GO:0046679"},{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to streptomycin","termid":"GO:0071239"}


id: FYPO:0005884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing myxothiazol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on myxothiazol","synonyms":[{"name":"normal cell population growth in presence of myxothiazol","type":"exact"},{"name":"normal cell population growth on MXT","type":"exact"},{"name":"normal cell population growth on myxothiazol","type":"exact"},{"name":"normal vegetative cell population growth on myxothiazol","type":"exact"}],"termid":"FYPO:0005884"}


id: PBO:0044161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 pseudogene 1","termid":"PBO:0044161"}


id: GO:0018011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal alanine of proteins.","definition_xrefs":["RESID:AA0062","RESID:AA0061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine methylation","termid":"GO:0018011"}


id: FYPO:0002657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) occurs to the same extent as in wild-type cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal NETO","termid":"FYPO:0001396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal occurrence of NETO","synonyms":[{"name":"normal NETO frequency","type":"exact"},{"name":"normal NETO occurrence","type":"exact"},{"name":"normal frequency of NETO","type":"exact"},{"name":"normal occurrence of NETO during mitotic cell cycle","type":"related"},{"name":"normal occurrence of NETO during vegetative growth","type":"exact"},{"name":"normal occurrence of activation of bipolar cell growth","type":"related"},{"name":"normal occurrence of cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"normal occurrence of new end take-off","type":"exact"},{"name":"normal occurrence of switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0002657"}


id: PBO:0033827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm1/Smc1","termid":"PBO:0033827"}


id: GO:0051006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme lipoprotein lipase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of triglyceride lipase activity","termid":"GO:0061365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein lipase activity","synonyms":[{"name":"activation of lipoprotein lipase activity","type":"narrow"},{"name":"stimulation of lipoprotein lipase activity","type":"narrow"},{"name":"up regulation of lipoprotein lipase activity","type":"exact"},{"name":"up-regulation of lipoprotein lipase activity","type":"exact"},{"name":"upregulation of lipoprotein lipase activity","type":"exact"}],"termid":"GO:0051006"}


id: PBO:0091363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, stationary phase specific","termid":"PBO:0091363"}


id: GO:0009291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of unidirectional (polarized) transfer of genetic information involving direct cellular contact between a donor and recipient cell; the contact is followed by the formation of a cellular bridge that physically connects the cells. Some or all of the chromosome(s) of the donor cell is transferred into the recipient cell.","definition_xrefs":["Wikipedia:Bacterial_conjugation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gene transfer","termid":"GO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"unidirectional conjugation","synonyms":[{"name":"bacterial conjugation","type":"related"}],"termid":"GO:0009291"}


id: PBO:0042677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 11","termid":"PBO:0042677"}


id: PBO:0090189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom40","termid":"PBO:0090189"}


id: SO:0000869
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift caused by inserting two bases.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift","termid":"SO:0000865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_2_framshift","synonyms":[{"name":"plus 2 framshift","type":"exact"}],"termid":"SO:0000869"}


id: GO:0023047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a chemical signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by chemical mediator (obsolete GO:0023047)","synonyms":[{"name":"signal initiation by chemical mediator","type":"exact"}],"termid":"GO:0023047"}


id: PBO:0064941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAC2 small nuclear protein","termid":"PBO:0064941"}


id: PBO:0043778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A4","termid":"PBO:0043778"}


id: PBO:0070039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1336, pseudogene","termid":"PBO:0070039"}


id: RO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is sequentially adjacent to y iff x and y do not overlap and if there are no base units intervening between x and y","direct_ancestors":[{"relation_name":"is_a","term_name":"does_not_overlap_sequence_of","termid":"RO:0002527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequentially_adjacent_to","termid":"RO:0002515"}


id: PBO:0070265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U105C small nucleolar","termid":"PBO:0070265"}


id: PR:O94361
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 1-acyl-sn-glycerol-3-phosphate acyltransferase delta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized acyltransferase C428.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.14","secondary_identifiers":["UniProtKB:O94361"],"synonyms":[{"name":"Spom972h-AGPAT4","type":"exact"}],"termid":"PR:O94361"}


id: GO:0002791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of peptide transport","termid":"GO:0090087"},{"relation_name":"regulates","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of peptide secretion","termid":"GO:0002791"}


id: PBO:0072693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX family transcription factor 3","termid":"PBO:0072693"}


id: SO:0001644
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An engineered vector that is able to take part in homologous recombination in a host with the intent of introducing site specific genomic modifications.","definition_xrefs":["MGD:tm","PMID:10354467"],"direct_ancestors":[{"relation_name":"has_part","term_name":"homologous_region","termid":"SO:0000853"},{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"targeting_vector","synonyms":[{"name":"targeting vector","type":"related"}],"termid":"SO:0001644"}


id: PBO:0026697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_melibiose_carbon_source","termid":"PBO:0026697"}


id: GO:0071285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lithium (Li+) ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lithium ion","termid":"GO:0010226"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lithium ion","termid":"GO:0071285"}


id: PBO:0076254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic vesicle glycoprotein 2C","termid":"PBO:0076254"}


id: PBO:0053798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1053","termid":"PBO:0053798"}


id: PBO:0056457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARVEL domain containing 3","termid":"PBO:0056457"}


id: PR:Q06975
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23237:SF0","PRO:DNx","OMA:SCHPO03642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.01","secondary_identifiers":["UniProtKB:Q06975"],"synonyms":[{"name":"Spom972h-GAR1","type":"exact"},{"name":"snoRNP protein GAR1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q06975"}


id: PBO:0068517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 109, pseudogene","termid":"PBO:0068517"}


id: PBO:0048269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 7","termid":"PBO:0048269"}


id: PBO:0052914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-6, pseudogene","termid":"PBO:0052914"}


id: PBO:0053636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 682","termid":"PBO:0053636"}


id: MONDO:0001395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular keratitis","secondary_identifiers":["DOID:11871","ICD9:370.22","UMLS:C0155076","MEDGEN:509772","SCTID:2853006","icd11.foundation:1283506871"],"termid":"MONDO:0001395","xrefs":{"Monarch":{"xref_id":"0001395"}}}


id: GO:0070631
data:
  {"annotated_genes":["SJAG_02332","SJAG_01460","SJAG_03200","SJAG_05196","SJAG_01422","SJAG_04558"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100092,102307,112287,110885,89642,102945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"},{"annotations":[89643,102946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990608"}]},"cv_name":"biological_process","definition":"Any process in which a spindle pole body is transported to, or maintained in, a specific location. A spindle pole body is a type of microtubule organizing center found in fungal cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular localization","termid":"GO:0051641"},{"relation_name":"is_a","term_name":"microtubule organizing center localization","termid":"GO:0061842"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"spindle pole body localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0071790","GO:1990944"],"synonyms":[{"name":"maintenance of spindle pole body localization","type":"narrow"},{"name":"spindle pole body localisation","type":"exact"}],"termid":"GO:0070631","terms_by_termid":{"GO:0140480":null,"GO:1990608":null}}


id: PBO:0062102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily B member 2 pseudogene","termid":"PBO:0062102"}


id: SO:0000959
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, linear DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"single_stranded_DNA_chromosome","termid":"SO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_single_stranded_DNA_chromosome","synonyms":[{"name":"linear single stranded DNA chromosome","type":"exact"}],"termid":"SO:0000959"}


id: GO:0061077
data:
  {"annotated_genes":["SJAG_02367","SJAG_02014","SJAG_02919","SJAG_04228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93355,94543,116231,117280],"is_not":false,"summary":null,"term":"GO:0061077"}]},"cv_name":"biological_process","definition":"The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02014":null,"SJAG_02367":null,"SJAG_02919":null,"SJAG_04228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0006457","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"chaperone-mediated protein folding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061077","terms_by_termid":{"GO:0061077":null}}


id: MONDO:0010853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicobacter pylori infection, susceptibility to","secondary_identifiers":["MEDGEN:325004","OMIM:600263","UMLS:C1838332"],"synonyms":[{"name":"H. pylori infection, susceptibility to","type":"exact"},{"name":"Helicobacter pylori infection, susceptibility to","type":"exact"}],"termid":"MONDO:0010853","xrefs":{"Monarch":{"xref_id":"0010853"}}}


id: PBO:0065251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20D","termid":"PBO:0065251"}


id: PBO:0014605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smg1","termid":"PBO:0014605"}


id: PBO:0084281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the ER; physically interacts with Kre6p; has a role in the synthesis of beta-1,6-glucan in the cell wall; required for cell viability","termid":"PBO:0084281"}


id: MONDO:0030835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay, impaired growth, dysmorphic facies, and axonal neuropathy","secondary_identifiers":["MEDGEN:1765507","UMLS:C5436781","OMIM:619090"],"synonyms":[{"name":"DIGFAN","type":"exact"}],"termid":"MONDO:0030835","xrefs":{"Monarch":{"xref_id":"0030835"}}}


id: GO:1901987
data:
  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id: PBO:0003493
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id: GO:0098855
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id: PBO:0053293
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id: PBO:0046291
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id: PBO:0069708
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id: PBO:0088252
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id: PBO:0088954
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id: MONDO:0014194
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id: MONDO:0006184
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id: GO:0016063
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id: PBO:0056832
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT2 pseudogene 1","termid":"PBO:0056832"}


id: PBO:0067506
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id: PBO:0071733
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id: GO:0070018
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id: PBO:0090813
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id: MONDO:0010020
data:
  {"annotated_genes":["SJAG_01537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84623],"is_not":false,"summary":null,"term":"MONDO:0010020"}]},"cv_name":"mondo","definition":"Any congenital generalized lipodystrophy in which the cause of the disease is a mutation in the BSCL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"},{"relation_name":"is_a","term_name":"Berardinelli-Seip congenital lipodystrophy","termid":"MONDO:0018883"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"congenital generalized lipodystrophy type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:318593","DOID:0111136","UMLS:C1720863","GARD:10212","OMIM:269700"],"synonyms":[{"name":"BSCL2 congenital generalised lipodystrophy (disease)","type":"exact"},{"name":"BSCL2 congenital generalized lipodystrophy (disease)","type":"exact"},{"name":"BSCL2-related Brunzell syndrome","type":"related"},{"name":"Berardinelli Seip congenital lipodystrophy type 2","type":"related"},{"name":"Berardinelli syndrome","type":"related"},{"name":"Berardinelli-Seip congenital lipodystrophy type 2","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy, type 2","type":"related"},{"name":"Berardinelli-Seip syndrome","type":"exact"},{"name":"Brunzell syndrome BSCL2-related","type":"exact"},{"name":"Brunzell syndrome, BSCL2-related","type":"related"},{"name":"CGL2","type":"exact"},{"name":"Seip syndrome","type":"related"},{"name":"congenital generalised lipodystrophy (disease) caused by mutation in BSCL2","type":"exact"},{"name":"congenital generalized lipodystrophy (disease) caused by mutation in BSCL2","type":"exact"},{"name":"congenital lipoatrophic diabetes","type":"exact"},{"name":"lipoatrophic diabetes, congenital","type":"related"},{"name":"lipodystrophy, Berardinelli-Seip congenital, type 2","type":"related"},{"name":"lipodystrophy, congenital generalized, type 2","type":"related"},{"name":"lipodystrophy, total, and acromegaloid gigantism","type":"related"},{"name":"total lipodystrophy and acromegaloid gigantism","type":"exact"}],"termid":"MONDO:0010020","terms_by_termid":{"MONDO:0010020":null},"xrefs":{"Monarch":{"xref_id":"0010020"}}}


id: GO:0035540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SNARE complex disassembly","termid":"GO:0035495"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of SNARE complex disassembly","termid":"GO:0035540"}


id: PBO:0003168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit (predicted)","termid":"PBO:0003168"}


id: GO:1901125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving candicidin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"candicidin metabolic process","synonyms":[{"name":"candicidin metabolism","type":"exact"}],"termid":"GO:1901125"}


id: GO:0018580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethylnitronate + O2 = acetaldehyde + nitrite.","definition_xrefs":["RHEA:28767","EC:1.13.12.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitronate monooxygenase activity","secondary_identifiers":["MetaCyc:2-NITROPROPANE-DIOXYGENASE-RXN"],"synonyms":[{"name":"2-nitropropane dioxygenase activity","type":"related"},{"name":"nitronate:oxygen 2-oxidoreductase (nitrite-forming) activity","type":"exact"}],"termid":"GO:0018580"}


id: MONDO:1012290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic active hepatitis, non-human animal","termid":"MONDO:1011778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic active hepatitis, dog","secondary_identifiers":["OMIA:001093-9615"],"termid":"MONDO:1012290","xrefs":{"Monarch":{"xref_id":"1012290"}}}


id: PBO:0054680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2088","termid":"PBO:0054680"}


id: PBO:0059320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 3","termid":"PBO:0059320"}


id: PBO:0087282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal recognition particle (SRP) receptor alpha subunit; contain GTPase domains; involved in SRP-dependent protein targeting; interacts with the beta subunit, Srp102p","termid":"PBO:0087282"}


id: GO:0120152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an outer dynein arm in the presence of calcium.","definition_xrefs":["GOC:krc","PMID:18620543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-dependent protein binding","termid":"GO:0048306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calcium-dependent outer dynein arm binding","termid":"GO:0120152"}


id: MONDO:0044033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or subacute reversible condition characterized by headaches, mental status changes, visual disturbances, and seizures associated with imaging findings of posterior leukoencephalopathy. It has been observed in association with hypertensive encephalopathy, eclampsia, and immunosuppressive and cytotoxic drug treatment.","definition_xrefs":["NCIT:C78598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hypertensive encephalopathy","termid":"MONDO:0006796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior leukoencephalopathy syndrome","secondary_identifiers":["MEDGEN:163898","UMLS:C0878576","MESH:D054038","SCTID:450886002"],"synonyms":[{"name":"PRES","type":"exact"},{"name":"Posterior reversible encephalopathy syndrome","type":"exact"},{"name":"RPLE","type":"exact"},{"name":"leukoencephalopathy syndrome, Posterior","type":"related"},{"name":"leukoencephalopathy syndromes, Posterior","type":"related"},{"name":"posterior reversible encephalopathy syndrome","type":"exact"},{"name":"reversible Posterior cerebral edema syndrome","type":"exact"},{"name":"reversible Posterior cerebral oedema syndrome","type":"exact"},{"name":"reversible Posterior leukoencephalopathy syndrome","type":"exact"},{"name":"reversible occipital parietal encephalopathy","type":"exact"},{"name":"reversible posterior leukoencephalopathy syndrome","type":"exact"},{"name":"syndrome, Posterior leukoencephalopathy","type":"related"},{"name":"syndromes, Posterior leukoencephalopathy","type":"related"}],"termid":"MONDO:0044033","xrefs":{"Monarch":{"xref_id":"0044033"}}}


id: PBO:0039323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase, 12R type","termid":"PBO:0039323"}


id: MONDO:0034021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"linkeropathy","termid":"MONDO:1040022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondylodysplastic Ehlers-Danlos syndrome","secondary_identifiers":["Orphanet:536471","MEDGEN:1814455","GARD:22214","UMLS:C5680154"],"synonyms":[{"name":"spondylodysplastic EDS","type":"exact"}],"termid":"MONDO:0034021","xrefs":{"Monarch":{"xref_id":"0034021"}}}


id: SO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature where recombination has occurred for the purpose of generating a diversity in the immune system.","direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature_of_rearranged_gene","termid":"SO:0000300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_gene_recombination_feature","synonyms":[{"name":"vertebrate immune system gene recombination feature","type":"exact"}],"termid":"SO:0000301"}


id: MONDO:0009228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gingival fibromatosis - facial dysmorphism is a very rare syndrome characterized by the association of gingival fibromatosis and craniofacial dysmorphism.","definition_xrefs":["Orphanet:2025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival fibromatosis-facial dysmorphism syndrome","secondary_identifiers":["UMLS:C1856761","MESH:C565567","GARD:10528","MEDGEN:346437","OMIM:228560"],"synonyms":[{"name":"fibromatosis, gingival, with distinctive facies","type":"related"},{"name":"gingival fibromatosis with craniofacial dysmorphism","type":"related"},{"name":"gingival fibromatosis with distinctive facies","type":"related"}],"termid":"MONDO:0009228","xrefs":{"Monarch":{"xref_id":"0009228"}}}


id: PBO:0073258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 2","termid":"PBO:0073258"}


id: MONDO:1010416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myoclonus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus, non-human animal","termid":"MONDO:1010002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, horse","secondary_identifiers":["OMIA:000689-9796"],"termid":"MONDO:1010416","xrefs":{"Monarch":{"xref_id":"1010416"}}}


id: PBO:0086697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to endoplasmic reticulum and cytoplasm; null mutant exhibits abnormal lipid metabolic phenotype; predicted to encode a membrane transporter based on phylogenetic analysis; not an essential gene; YJR015W has a paralog, SNG1, that arose from the whole genome duplication","termid":"PBO:0086697"}


id: PBO:0084561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-binding component of the CORVET complex; involved in endosomal vesicle tethering and fusion in the endosome to vacuole protein targeting pathway; interacts with Vps21p; contains RING finger motif","termid":"PBO:0084561"}


id: PBO:0075546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPECC1L-ADORA2A readthrough (NMD candidate)","termid":"PBO:0075546"}


id: PBO:0081845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF778 divergent transcript","termid":"PBO:0081845"}


id: GO:0141031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton by actin crosslinking the host actin filaments. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22814176","PMID:14512630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via actin crosslinking","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via actin crosslinking","type":"exact"}],"termid":"GO:0141031"}


id: GO:0098726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The symmetric division of a skeletal muscle satellite stem cell, resulting in two skeletal muscle satellite stem cells. This process is involved in amplification of the pool of these cells.","definition_xrefs":["PMID:23303905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic stem cell division","termid":"GO:0048103"},{"relation_name":"is_a","term_name":"symmetric stem cell division","termid":"GO:0098724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symmetric division of skeletal muscle satellite stem cell","termid":"GO:0098726"}


id: PBO:0017896
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human Int6","termid":"PBO:0017896"}


id: PBO:0045254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1","termid":"PBO:0045254"}


id: PBO:0049243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrin releasing peptide","termid":"PBO:0049243"}


id: GO:0035171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized hemocyte precursor cell acquires the specialized features of a lamellocyte. Lamellocytes are a hemocyte lineage that exists only in larvae, but are seldom observed in healthy animals. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["GOC:bf","PMID:14734104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval lymph gland hemocyte differentiation","termid":"GO:0035168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lamellocyte differentiation","synonyms":[{"name":"lamellocyte cell differentiation","type":"exact"}],"termid":"GO:0035171"}


id: MONDO:1011152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anodontia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anodontia, non-human animal","termid":"MONDO:1010293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anodontia, domestic cat","secondary_identifiers":["OMIA:000048-9685"],"termid":"MONDO:1011152","xrefs":{"Monarch":{"xref_id":"1011152"}}}


id: GO:0050282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + H2O + NAD+ = 3-hydroxypyruvate + NH3 + NADH.","definition_xrefs":["EC:1.4.1.7","MetaCyc:SERINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"serine 2-dehydrogenase activity","secondary_identifiers":["RHEA:20884"],"synonyms":[{"name":"L-serine:NAD oxidoreductase (deaminating) activity","type":"related"},{"name":"L-serine:NAD+ 2-oxidoreductase (deaminating)","type":"related"},{"name":"serine dehydrogenase activity","type":"exact"}],"termid":"GO:0050282"}


id: PBO:0045263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta/notch like EGF repeat containing","termid":"PBO:0045263"}


id: FYPO:0005745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype in which the export of protein from the nucleus is abnormal. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"},{"relation_name":"is_a","term_name":"abnormal protein transport","termid":"FYPO:0005744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein export from nucleus","termid":"FYPO:0005745"}


id: GO:1905829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of prostaglandin catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:12432938","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of prostaglandin catabolic process","termid":"GO:1905828"},{"relation_name":"negatively_regulates","term_name":"prostaglandin catabolic process","termid":"GO:1905344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of prostaglandin catabolic process","synonyms":[{"name":"down regulation of prostaglandin breakdown","type":"exact"},{"name":"down regulation of prostaglandin catabolic process","type":"exact"},{"name":"down regulation of prostaglandin catabolism","type":"exact"},{"name":"down regulation of prostaglandin degradation","type":"exact"},{"name":"down-regulation of prostaglandin breakdown","type":"exact"},{"name":"down-regulation of prostaglandin catabolic process","type":"exact"},{"name":"down-regulation of prostaglandin catabolism","type":"exact"},{"name":"down-regulation of prostaglandin degradation","type":"exact"},{"name":"downregulation of prostaglandin breakdown","type":"exact"},{"name":"downregulation of prostaglandin catabolic process","type":"exact"},{"name":"downregulation of prostaglandin catabolism","type":"exact"},{"name":"downregulation of prostaglandin degradation","type":"exact"},{"name":"inhibition of prostaglandin breakdown","type":"narrow"},{"name":"inhibition of prostaglandin catabolic process","type":"narrow"},{"name":"inhibition of prostaglandin catabolism","type":"narrow"},{"name":"inhibition of prostaglandin degradation","type":"narrow"},{"name":"negative regulation of prostaglandin breakdown","type":"exact"},{"name":"negative regulation of prostaglandin catabolism","type":"exact"},{"name":"negative regulation of prostaglandin degradation","type":"exact"}],"termid":"GO:1905829"}


id: PBO:0079398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 5","termid":"PBO:0079398"}


id: GO:0046099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanine, 2-amino-6-hydroxypurine, a purine that is one of the five main bases found in nucleic acids and a component of a number of phosphorylated guanosine derivatives whose metabolic or regulatory functions are important.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase biosynthetic process","termid":"GO:0009113"},{"relation_name":"is_a","term_name":"guanine metabolic process","termid":"GO:0046098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanine biosynthetic process","synonyms":[{"name":"guanine anabolism","type":"exact"},{"name":"guanine biosynthesis","type":"exact"},{"name":"guanine formation","type":"exact"},{"name":"guanine synthesis","type":"exact"}],"termid":"GO:0046099"}


id: PBO:0062402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 25 pseudogene","termid":"PBO:0062402"}


id: PBO:0067105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 147, pseudogene","termid":"PBO:0067105"}


id: MONDO:0500018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pulmonary disease with histological pattern of interstitial pneumonitis characterized by the deposit of intra-alveolar fibrin and diffuse organizing pneumonia within the alveolar ducts and bronchioles, with large etiological spectra.","definition_xrefs":["PMID:31076239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute fibrinous and organizing pneumonia","synonyms":[{"name":"AFOP","type":"exact"}],"termid":"MONDO:0500018","xrefs":{"Monarch":{"xref_id":"0500018"}}}


id: FYPO:0007817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell has a nucleus in an abnormal location during G0 phase. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mislocalized nucleus during G0","synonyms":[{"name":"abnormal nucleus location during G0","type":"exact"},{"name":"abnormal nucleus position during G0","type":"exact"},{"name":"displaced nucleus during G0","type":"exact"},{"name":"mislocalised nucleus during G0","type":"exact"},{"name":"mislocalized nucleus during cell quiescence","type":"exact"},{"name":"mislocalized nucleus during quiescence","type":"exact"},{"name":"misplaced nuclei during G0","type":"exact"},{"name":"misplaced nucleus during G0","type":"exact"},{"name":"nuclear displacement during G0","type":"exact"}],"termid":"FYPO:0007817"}


id: PBO:0075679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SQLE divergent transcript","termid":"PBO:0075679"}


id: PBO:0067469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 598, pseudogene","termid":"PBO:0067469"}


id: MONDO:0009038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis-fibular aplasia is an extremely rare genetic disease, reported in only 2 brothers to date, characterized by the combination of craniosynostosis (involving both coronal sutures), congenital absence of the fibula, cryptorchidism, and bilateral simian creases. Intelligence is normal and an autosomal recessive mode of inheritance has been proposed. There have been no further reports in the literature since 1972.","definition_xrefs":["Orphanet:1533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis-fibular aplasia syndrome","secondary_identifiers":["UMLS:C1857492","MESH:C565665","SCTID:732250002","OMIM:218550","MEDGEN:347468"],"synonyms":[{"name":"Lowry syndrome","type":"exact"},{"name":"craniosynostosis with fibular aplasia","type":"related"}],"termid":"MONDO:0009038","xrefs":{"Monarch":{"xref_id":"0009038"}}}


id: GO:0070032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, and complexin I (or orthologs thereof).","definition_xrefs":["PMID:7553862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex","synonyms":[{"name":"SNARE complex (Vamp2, Snap25, Stx1a, Cplx1)","type":"narrow"},{"name":"Vamp2-Snap25-Stx1a-Cplx1 complex","type":"narrow"}],"termid":"GO:0070032"}


id: PBO:0016569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siva family protein, human apoptosis-inducing factor ortholog (predicted)","termid":"PBO:0016569"}


id: PBO:0070616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1","termid":"PBO:0070616"}


id: MOD:00407
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxyl group with a carboxy methyl ester group. OBSOLETE because Unimod:14 merged with entry 34, remap to MOD:00599.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00407 residue methyl ester (obsolete MOD:00407)","synonyms":[{"name":"ResOMe","type":"exact"}],"termid":"MOD:00407"}


id: PBO:0046766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 6","termid":"PBO:0046766"}


id: PATO:0001755
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A peramorphic growth quality which is due to a delayed offset.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peramorphic growth","termid":"PATO:0001752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypermorphic growth","termid":"PATO:0001755"}


id: MONDO:0018239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aggrecan-related bone disorder (obsolete MONDO:0018239)","secondary_identifiers":["Orphanet:364817"],"termid":"MONDO:0018239","xrefs":{"Monarch":{"xref_id":"0018239"}}}


id: PBO:0059803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 29","termid":"PBO:0059803"}


id: PBO:0034406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_anatomical_entity_(obsolete_has_target_anatomical_entity)","termid":"PBO:0034406"}


id: MONDO:0034987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neoplasm","termid":"MONDO:0021040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intraductal tubulopapillary neoplasm of pancreas","secondary_identifiers":["UMLS:C2987189","MEDGEN:459415","GARD:22331","Orphanet:580572"],"termid":"MONDO:0034987","xrefs":{"Monarch":{"xref_id":"0034987"}}}


id: PATO:0001184
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001184 maturity value (obsolete PATO:0001184)","termid":"PATO:0001184"}


id: MONDO:0002914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that affects the brain stem and occurs during childhood.","definition_xrefs":["NCIT:C5969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brainstem cancer","termid":"MONDO:0002912"},{"relation_name":"is_a","term_name":"childhood infratentorial neoplasm","termid":"MONDO:0002915"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood brain stem neoplasm","secondary_identifiers":["UMLS:C1332951","DOID:4206","MEDGEN:272459"],"synonyms":[{"name":"brain stem neoplasm","type":"exact"},{"name":"brainstem cancer of childhood","type":"exact"},{"name":"childhood brain stem neoplasm","type":"exact"},{"name":"childhood brain stem tumor","type":"exact"},{"name":"childhood brain stem tumour","type":"exact"},{"name":"childhood brainstem cancer","type":"exact"},{"name":"childhood brainstem neoplasm","type":"exact"},{"name":"childhood brainstem tumor","type":"exact"},{"name":"childhood brainstem tumour","type":"exact"},{"name":"childhood neoplasm of brain stem","type":"exact"},{"name":"childhood neoplasm of brainstem","type":"exact"},{"name":"childhood neoplasm of the brain stem","type":"exact"},{"name":"childhood neoplasm of the brainstem","type":"exact"},{"name":"childhood tumor of brain stem","type":"exact"},{"name":"childhood tumor of brainstem","type":"exact"},{"name":"childhood tumor of the brain stem","type":"exact"},{"name":"childhood tumor of the brainstem","type":"exact"},{"name":"childhood tumour of brain stem","type":"exact"},{"name":"childhood tumour of brainstem","type":"exact"},{"name":"childhood tumour of the brain stem","type":"exact"},{"name":"childhood tumour of the brainstem","type":"exact"},{"name":"paediatric brain stem neoplasm","type":"exact"},{"name":"paediatric brain stem tumour","type":"exact"},{"name":"paediatric brainstem cancer","type":"exact"},{"name":"paediatric brainstem neoplasm","type":"exact"},{"name":"paediatric brainstem tumour","type":"exact"},{"name":"paediatric neoplasm of brain stem","type":"exact"},{"name":"paediatric neoplasm of brainstem","type":"exact"},{"name":"paediatric neoplasm of the brain stem","type":"exact"},{"name":"paediatric neoplasm of the brainstem","type":"exact"},{"name":"paediatric tumour of brain stem","type":"exact"},{"name":"paediatric tumour of brainstem","type":"exact"},{"name":"paediatric tumour of the brain stem","type":"exact"},{"name":"paediatric tumour of the brainstem","type":"exact"},{"name":"pediatric brain stem neoplasm","type":"exact"},{"name":"pediatric brain stem tumor","type":"exact"},{"name":"pediatric brainstem cancer","type":"exact"},{"name":"pediatric brainstem neoplasm","type":"exact"},{"name":"pediatric brainstem tumor","type":"exact"},{"name":"pediatric neoplasm of brain stem","type":"exact"},{"name":"pediatric neoplasm of brainstem","type":"exact"},{"name":"pediatric neoplasm of the brain stem","type":"exact"},{"name":"pediatric neoplasm of the brainstem","type":"exact"},{"name":"pediatric tumor of brain stem","type":"exact"},{"name":"pediatric tumor of brainstem","type":"exact"},{"name":"pediatric tumor of the brain stem","type":"exact"},{"name":"pediatric tumor of the brainstem","type":"exact"}],"termid":"MONDO:0002914","xrefs":{"Monarch":{"xref_id":"0002914"}}}


id: PBO:0067262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 336, pseudogene","termid":"PBO:0067262"}


id: PBO:0070169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 83 pseudogene","termid":"PBO:0070169"}


id: PBO:0054580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1982","termid":"PBO:0054580"}


id: GO:0062021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The protein localization to chromatin by which a cohesin ring complex is topologically linked to dsDNA (leading strand) as part of the mitotic cell cycle.","definition_xrefs":["PMID:29358048","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cohesin dsDNA (leading strand) loading (obsolete GO:0062021)","termid":"GO:0062021"}


id: PBO:0047853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(q21)","termid":"PBO:0047853"}


id: PBO:0072940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 20","termid":"PBO:0072940"}


id: GO:0120502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (omega-1)-ethyl fatty acid + O2 + reduced [NADPH--hemoprotein reductase] = an (omega-1)-hydroxy fatty acid + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:44548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fatty acid omega-1 hydroxylase activity","termid":"GO:0120502"}


id: PBO:0050579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 3B1","termid":"PBO:0050579"}


id: FYPO:0003863
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is increased, resulting in the accumulation of proteins with oxidative modifications including carbonylated proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification","termid":"FYPO:0002499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased protein oxidation","synonyms":[{"name":"accumulation of carbonylated proteins","type":"related"},{"name":"increased level of disulfides","type":"related"},{"name":"increased level of oxidised thiols in proteins","type":"related"},{"name":"increased level of oxidized protein thiols","type":"related"}],"termid":"FYPO:0003863"}


id: GO:0046994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces quinone or similar compound.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, with a quinone or similar compound as acceptor","secondary_identifiers":["EC:1.12.5.-"],"termid":"GO:0046994"}


id: GO:0060507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an epidermal growth factor-type receptor binding to one of its physiological ligands. This process contributes to lung development.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"part_of","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epidermal growth factor receptor signaling pathway involved in lung development","synonyms":[{"name":"epidermal growth factor receptor signalling pathway involved in lung development","type":"exact"}],"termid":"GO:0060507"}


id: MONDO:0021275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin papilloma","termid":"MONDO:0002536"},{"relation_name":"is_a","term_name":"benign eyelid neoplasm","termid":"MONDO:0021605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"papilloma of eyelid","secondary_identifiers":["NCIT:C4061","MEDGEN:256159","SCTID:314515006","UMLS:C1142491","icd11.foundation:643260480"],"synonyms":[{"name":"eyelid papilloma","type":"exact"},{"name":"papilloma of the eyelid","type":"exact"}],"termid":"MONDO:0021275","xrefs":{"Monarch":{"xref_id":"0021275"}}}


id: PBO:0031127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_proline_nitrogen_source","termid":"PBO:0031127"}


id: GO:0009655
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigment-protein complex primarily associated to PSII in higher plants, green algae and cyanobacteria that directly transfers electrons to the reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II","termid":"GO:0009517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, core complex","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIa subcomplex","type":"narrow"},{"name":"PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex","type":"narrow"},{"name":"PSII associated light-harvesting complex II, core complex, LHCIId subcomplex","type":"narrow"}],"termid":"GO:0009655"}


id: PBO:0063809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1 pseudogene 1","termid":"PBO:0063809"}


id: PBO:0077828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member G, pseudogene","termid":"PBO:0077828"}


id: PBO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MIZ","termid":"PBO:0000656"}


id: MONDO:0000881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloid and lymphoid neoplasms with eosinophilia and abnormalities of PDGFRA, PDGFRB, and FGFR1 (obsolete MONDO:0000881)","termid":"MONDO:0000881","xrefs":{"Monarch":{"xref_id":"0000881"}}}


id: PR:O59814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.04c gene.","definition_xrefs":["UniProtKB:O59814","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C794.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.04c","synonyms":[{"name":"Spom972h-SPCC794.04c","type":"exact"}],"termid":"PR:O59814"}


id: GO:0015255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of propanediol through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propanediol transmembrane transporter activity","termid":"GO:0015170"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"propanediol channel activity","termid":"GO:0015255"}


id: PBO:0066485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 2","termid":"PBO:0066485"}


id: PR:Q9HE00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A metaxin-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01294","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.04","secondary_identifiers":["UniProtKB:Q9HE00"],"synonyms":[{"name":"Spom972h-MTX2","type":"exact"}],"termid":"PR:Q9HE00"}


id: PBO:0052930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-2","termid":"PBO:0052930"}


id: MONDO:0002681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the choroid plexus","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"choroid plexus neoplasm","termid":"MONDO:0016717"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"choroid plexus cancer","secondary_identifiers":["EFO:0007206","UMLS:C0346289","DOID:3540","MEDGEN:138053","NCIT:C4533"],"synonyms":[{"name":"cancer of choroid plexus","type":"exact"},{"name":"choroid plexus cancer","type":"exact"},{"name":"choroid plexus neoplasm","type":"broad"},{"name":"malignant choroid plexus neoplasm","type":"exact"},{"name":"malignant choroid plexus neoplasms","type":"exact"},{"name":"malignant choroid plexus tumor","type":"exact"},{"name":"malignant choroid plexus tumors","type":"exact"},{"name":"malignant choroid plexus tumour","type":"exact"},{"name":"malignant choroid plexus tumours","type":"exact"},{"name":"malignant neoplasm of choroid plexus","type":"exact"},{"name":"malignant neoplasm of the choroid plexus","type":"exact"},{"name":"malignant tumor of choroid plexus","type":"exact"},{"name":"malignant tumor of the choroid plexus","type":"exact"},{"name":"malignant tumour of choroid plexus","type":"exact"},{"name":"malignant tumour of the choroid plexus","type":"exact"},{"name":"tumor of choroid plexus","type":"broad"},{"name":"tumour of choroid plexus","type":"broad"},{"name":"tumour of the choroid plexus","type":"broad"}],"termid":"MONDO:0002681","xrefs":{"Monarch":{"xref_id":"0002681"}}}


id: PR:P36614
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase 6 catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11668:SF24","OMA:SCHPO04922","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase ppe1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.12","secondary_identifiers":["UniProtKB:P36614"],"synonyms":[{"name":"Spom972h-PPP6C","type":"exact"},{"name":"phosphatase esp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36614"}


id: GO:0060096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a cell, in which released serotonin acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion","termid":"GO:0001820"},{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"serotonin secretion, neurotransmission","synonyms":[{"name":"serotonin release, neurotransmission","type":"related"}],"termid":"GO:0060096"}


id: MONDO:0019315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diffuse cutaneous mastocytosis (DCM) is a rare form of cutaneous mastocytosis (CM) characterized by generalized erythroderma, various degrees of blistering, skin with a ''peau d'orange'' appearance and the accumulation of mast cells in the skin. At least two DCM variants are recognized, one with extreme blistering (Bullous DCM) and one with infiltrations (Pseudoxanthomatous DCM).","definition_xrefs":["Orphanet:79456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mastocytosis","termid":"MONDO:0019023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"diffuse cutaneous mastocytosis","secondary_identifiers":["MedDRA:10012812","MEDGEN:44303","NCIT:C3218","UMLS:C0024901","DOID:3665","ICDO:9740/1","GARD:12686","icd11.foundation:193128939"],"synonyms":[{"name":"DCM","type":"broad"},{"name":"diffuse cutaneous maculopapulous mastocytosis","type":"exact"},{"name":"diffuse cutaneous mastocytosis","type":"exact"}],"termid":"MONDO:0019315","xrefs":{"Monarch":{"xref_id":"0019315"}}}


id: MONDO:0030471
data:
  {"annotated_genes":["SJAG_06560"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85566],"is_not":false,"summary":null,"term":"MONDO:0030471"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619603","MEDGEN:1794226","UMLS:C5562016"],"synonyms":[{"name":"GAMOS9","type":"exact"}],"termid":"MONDO:0030471","terms_by_termid":{"MONDO:0030471":null},"xrefs":{"Monarch":{"xref_id":"0030471"}}}


id: GO:0006895
data:
  {"annotated_genes":["SJAG_02912","SJAG_00380","SJAG_04338","SJAG_04966","SJAG_01598","SJAG_04112","SJAG_01027","SJAG_02282","SJAG_03756","SJAG_04609","SJAG_01488","SJAG_03005","SJAG_02177","SJAG_02240"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88663,91795,94400,99407,99743,99803,100610,101057,103547,106835,112449,116410,117865,117934],"is_not":false,"summary":null,"term":"GO:0006895"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes.","definition_xrefs":["ISBN:0716731363","PMID:10873832","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-Golgi vesicle-mediated transport","termid":"GO:0006892"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00380":null,"SJAG_01027":null,"SJAG_01488":null,"SJAG_01598":null,"SJAG_02177":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03756":null,"SJAG_04112":null,"SJAG_04338":null,"SJAG_04609":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"Golgi to endosome transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0048218"],"synonyms":[{"name":"Golgi to endosome vesicle-mediated transport","type":"exact"},{"name":"TGN to endosome transport","type":"exact"},{"name":"trans-Golgi to endosome transport","type":"exact"}],"termid":"GO:0006895","terms_by_termid":{"GO:0006895":null}}


id: PBO:0058886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10523","termid":"PBO:0058886"}


id: PBO:0072098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 29","termid":"PBO:0072098"}


id: GO:0007390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The spreading of the amnioserosa from its compressed state to cover the whole of the dorsal surface. Initiating in the thorax and spreading posteriorly, it is accompanied by the transition from a parasegmental to segmental division of the embryo.","definition_xrefs":["GOC:bf","PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-band shortening","synonyms":[{"name":"germ-band retraction","type":"exact"}],"termid":"GO:0007390"}


id: GO:0061694
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A catalytic protein complex that is capable of alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity.","definition_xrefs":["PMID:22089136","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase complex","termid":"GO:0061694"}


id: MONDO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm arising from the sweat glands.","definition_xrefs":["NCIT:C3398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"sweat gland disorder","termid":"MONDO:0006615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sweat gland neoplasm","secondary_identifiers":["MONDO:0021219","UMLS:C0038987","ICD9:239.2","DOID:2664","EFO:1001204","ICDO:8400/1","MEDGEN:21039","MESH:D013544","SCTID:126490003"],"synonyms":[{"name":"neoplasm of sweat gland","type":"exact"},{"name":"neoplasm of the sweat gland","type":"exact"},{"name":"sweat gland neoplasm","type":"exact"},{"name":"sweat gland neoplasm (disease)","type":"exact"},{"name":"sweat gland neoplasms","type":"exact"},{"name":"sweat gland tumor","type":"exact"},{"name":"sweat gland tumor (morphologic abnormality)","type":"exact"},{"name":"sweat gland tumor NOS (morphologic abnormality)","type":"exact"},{"name":"sweat gland tumour","type":"exact"},{"name":"sweat gland tumour (morphologic abnormality)","type":"exact"},{"name":"sweat gland tumour NOS (morphologic abnormality)","type":"exact"},{"name":"tumor of sweat gland","type":"exact"},{"name":"tumor of the sweat gland","type":"exact"},{"name":"tumour of sweat gland","type":"exact"},{"name":"tumour of the sweat gland","type":"exact"}],"termid":"MONDO:0002381","xrefs":{"Monarch":{"xref_id":"0002381"}}}


id: GO:0098608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methylselenol + H2O => H2Se + CH3OH.","definition_xrefs":["PMID:17451884","PMID:17988700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylselenol demethylase activity","secondary_identifiers":["Reactome:R-HSA-2408530"],"termid":"GO:0098608"}


id: SO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 5th residue (a lysine), from the start of the H2A histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2A_acetylation_site","termid":"SO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AK5_acetylation_site","synonyms":[{"name":"H2AK5 acetylation site","type":"exact"},{"name":"H2AK5ac","type":"exact"}],"termid":"SO:0001938"}


id: PBO:0034566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_J-shaped_vegetative_cell_with_curved_cytoplasmic_microtubules","termid":"PBO:0034566"}


id: MONDO:0027677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoniazid toxicity","secondary_identifiers":["Orphanet:240887"],"termid":"MONDO:0027677","xrefs":{"Monarch":{"xref_id":"0027677"}}}


id: GO:0034209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of an acetyl group to a sterol molecule. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:rb","PMID:18034159"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol acetylation (obsolete GO:0034209)","termid":"GO:0034209"}


id: PBO:0064947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 regulation associated lncRNA","termid":"PBO:0064947"}


id: GO:0044876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 L-selenocysteine + 2 hercynine + O2 = 2 H2O + 2 hercynylselenocysteine.","definition_xrefs":["GOC:jl","PMID:24828577"],"gene_count":0,"genotype_count":0,"name":"obsolete hercynylselenocysteine synthase (obsolete GO:0044876)","termid":"GO:0044876"}


id: PBO:0073228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 1","termid":"PBO:0073228"}


id: GO:1901785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-cresol.","definition_xrefs":["GOC:yaf","UniPathway:UPA00708","GOC:TermGenie","PMID:10623531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol catabolic process","termid":"GO:0046199"},{"relation_name":"is_a","term_name":"p-cresol metabolic process","termid":"GO:1901784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-cresol catabolic process","synonyms":[{"name":"p-cresol breakdown","type":"exact"},{"name":"p-cresol catabolism","type":"exact"},{"name":"p-cresol degradation","type":"exact"}],"termid":"GO:1901785"}


id: PBO:0075749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 2","termid":"PBO:0075749"}


id: GO:0045251
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex facilitating the electron transfer from an acyl-CoA molecule to ubiquinone via its flavin adenine dinucleotide (FAD) cofactor. Usually contains an alpha and a beta subunit and the structural cofactor adenosine monophosphate (AMP). Part of a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the electron transport system.","definition_xrefs":["GOC:bhm","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"electron transfer flavoprotein complex","synonyms":[{"name":"ETF complex","type":"exact"}],"termid":"GO:0045251"}


id: FYPO:0004263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after entering stationary phase, under conditions of nitrogen limitation, such as in a medium that contains a low level of NH4Cl and no other nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal viability in stationary phase","termid":"FYPO:0001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal viability in stationary phase during nitrogen limitation","synonyms":[{"name":"normal cell population viability in stationary phase during nitrogen limitation","type":"exact"}],"termid":"FYPO:0004263"}


id: PBO:0013129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triacylglycerol lipase ptl1","termid":"PBO:0013129"}


id: MOD:00401
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct of a cysteine residue with the Gygi isotope-coded affinity tag d0 reagent.","definition_xrefs":["Unimod:8#C","PubMed:10504701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Gygi ICAT(TM) d0 modified cysteine","synonyms":[{"name":"Gygi ICAT(TM) d0","type":"related"},{"name":"ICAT-G","type":"related"}],"termid":"MOD:00401"}


id: GO:0061484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of hematopoietic stem cells within a population of cells.","definition_xrefs":["GOC:dph","PMID:21508411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell homeostasis","termid":"GO:0061484"}


id: PBO:0112182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional GLNase (glutamine amidotransferase)/CPSase (carbamoylphosphate synthetase)/ATCase (aspartate transcarbamoylase) Ura1","termid":"PBO:0112182"}


id: PBO:0012295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit Spt16","termid":"PBO:0012295"}


id: FYPO:0002404
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118816,118809,118743,118814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003779"},{"annotations":[118864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006433"},{"annotations":[118655,118654,118657,118669,118666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001784"},{"annotations":[118652,118656,118668,118660,118665,118653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001556"},{"annotations":[118950],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the endomembrane system is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03940":null,"SJAG_04464":null},"genotype_count":12,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal endomembrane system","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_01745","SJAG_04464","SJAG_00426","SJAG_03449","SJAG_02763","SJAG_01906","SJAG_03940"],"single_locus_genotype_uniquenames":["nem1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","lem2delta","nem2delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal endomembrane system during mitotic cell cycle","type":"related"},{"name":"abnormal endomembrane system during vegetative growth","type":"exact"},{"name":"abnormal endomembrane system physical object quality","type":"exact"}],"termid":"FYPO:0002404","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null}}


id: GO:0021542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus.","definition_xrefs":["GOC:cls","GOC:dgh","ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hippocampus development","termid":"GO:0021766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dentate gyrus development","termid":"GO:0021542"}


id: PBO:0055066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2482","termid":"PBO:0055066"}


id: FYPO:0006305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin monomers is normal (i.e. indistinguishable from wild type). The relevant actin-binding protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal actin monomer binding","synonyms":[{"name":"normal G-actin binding","type":"exact"}],"termid":"FYPO:0006305"}


id: PBO:0068931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 174, pseudogene","termid":"PBO:0068931"}


id: PR:Q9Y7R3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A condensin complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04301","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.03c","secondary_identifiers":["UniProtKB:Q9Y7R3"],"synonyms":[{"name":"CAPH homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NCAPH","type":"exact"},{"name":"barren homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p105 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:Q9Y7R3"}


id: PBO:0025417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sodium ion/proton antiporter Nhe1/Sod2","termid":"PBO:0025417"}


id: MONDO:0017300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pericardium anomaly comprises a group of rare congenital cardiac malformations characterized by the complete (Congenital complete agenesis of pericardium) or partial absence of the pericardium (Congenital partial agenesis of pericardium), or by the presence of pericardial cysts (Pleuropericardial cyst).","definition_xrefs":["Orphanet:2846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pericardium anomaly","secondary_identifiers":["UMLS:C0685699","icd11.foundation:1188459532","MEDGEN:672640","SCTID:93018000","GARD:18779","ICD9:746.89"],"termid":"MONDO:0017300","xrefs":{"Monarch":{"xref_id":"0017300"}}}


id: GO:2000963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellooligosaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide metabolic process","termid":"GO:2000960"},{"relation_name":"regulates","term_name":"cellooligosaccharide catabolic process","termid":"GO:2000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cellooligosaccharide catabolic process","synonyms":[{"name":"regulation of cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000963"}


id: PBO:0043771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX20","termid":"PBO:0043771"}


id: GO:0017186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptidyl-pyroglutamic acid, catalyzed by glutaminyl-peptide cyclotransferase.","definition_xrefs":["RESID:AA0031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamine modification","termid":"GO:0018199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase","synonyms":[{"name":"2-pyrrolidone-5-carboxylic acid biosynthesis","type":"exact"},{"name":"2-pyrrolidone-5-carboxylic acid biosynthetic process","type":"exact"},{"name":"peptidyl-pyroglutamic acid anabolism, using glutaminyl-peptide cyclotransferase","type":"exact"},{"name":"peptidyl-pyroglutamic acid formation, using glutaminyl-peptide cyclotransferase","type":"exact"},{"name":"peptidyl-pyroglutamic acid synthesis, using glutaminyl-peptide cyclotransferase","type":"exact"}],"termid":"GO:0017186"}


id: GO:0005209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma protein (obsolete GO:0005209)","synonyms":[{"name":"plasma protein","type":"exact"}],"termid":"GO:0005209"}


id: FYPO:0006496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of phosphatidylserine in the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:27852900","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal membrane lipid distribution","termid":"FYPO:0006546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal plasma membrane phosphatidylserine distribution","synonyms":[{"name":"normal plasma membrane PS distribution","type":"exact"},{"name":"normal plasma membrane phosphatidylserine distribution during mitotic cell cycle","type":"related"},{"name":"normal plasma membrane phosphatidylserine distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0006496"}


id: PBO:0083033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta 1-pyrroline-5-carboxylate reductase; catalyzes the last step in proline biosynthesis","termid":"PBO:0083033"}


id: PBO:0061801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ODF2 antisense RNA 1","termid":"PBO:0061801"}


id: PBO:0031554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peptidase_activity","termid":"PBO:0031554"}


id: MONDO:0006611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation of non-necrotizing granulomas in the skin. It may be a manifestation of systemic sarcoidosis or may also arise in isolation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin sarcoidosis","secondary_identifiers":["MEDGEN:19872","ICD10CM:D86.3","SCTID:55941000","Wikipedia:Cutaneous_manifestations_of_sarcoidosis","NCIT:C34996","EFO:1000767","UMLS:C0036203","DOID:13402"],"synonyms":[{"name":"cutaneous sarcoid","type":"exact"},{"name":"cutaneous sarcoidosis","type":"exact"},{"name":"sarcoidosis of zone of skin","type":"exact"},{"name":"zone of skin sarcoidosis","type":"exact"}],"termid":"MONDO:0006611","xrefs":{"Monarch":{"xref_id":"0006611"}}}


id: PBO:0041915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellin 3 precursor","termid":"PBO:0041915"}


id: FYPO:0000733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long spindle","termid":"FYPO:0000730"},{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000120"],"is_obsolete":false,"name":"long mitotic spindle","synonyms":[{"name":"elongated mitotic spindle","type":"exact"},{"name":"increased mitotic spindle length","type":"exact"},{"name":"long bipolar mitotic spindle","type":"exact"},{"name":"long mitotic spindle during vegetative growth","type":"exact"},{"name":"long mitotic spindles","type":"exact"},{"name":"long spindle during mitosis","type":"exact"},{"name":"long spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000733"}


id: GO:1905860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of heparan sulfate proteoglycan binding.","definition_xrefs":["GOC:TermGenie","GOC:aruk","GOC:bc","GO_REF:0000059","PMID:7683668"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of heparan sulfate proteoglycan binding (obsolete GO:1905860)","synonyms":[{"name":"activation of heparan sulfate proteoglycan binding","type":"narrow"},{"name":"activation of heparin proteoglycan binding","type":"related"},{"name":"positive regulation of heparin proteoglycan binding","type":"related"},{"name":"up regulation of heparan sulfate proteoglycan binding","type":"exact"},{"name":"up regulation of heparin proteoglycan binding","type":"related"},{"name":"up-regulation of heparan sulfate proteoglycan binding","type":"exact"},{"name":"up-regulation of heparin proteoglycan binding","type":"related"},{"name":"upregulation of heparan sulfate proteoglycan binding","type":"exact"},{"name":"upregulation of heparin proteoglycan binding","type":"related"}],"termid":"GO:1905860"}


id: GO:0008476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + protein tyrosine = adenosine 3',5'-bisphosphate + protein tyrosine-O-sulfate.","definition_xrefs":["EC:2.8.2.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016782","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein-tyrosine sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-9668148","RHEA:16801","Reactome:R-HSA-8954262","Reactome:R-HSA-9668023","MetaCyc:PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:protein-tyrosine O-sulfotransferase activity","type":"related"},{"name":"protein-tyrosine sulphotransferase activity","type":"exact"},{"name":"tyrosylprotein sulfotransferase activity","type":"related"}],"termid":"GO:0008476"}


id: PBO:0068578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 29, pseudogene","termid":"PBO:0068578"}


id: MONDO:0016740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor of the central nervous system characterized by extra-embryonic differentiation along trophoblastic lines. The diagnosis requires the identification of cytotrophoblastic elements, as well as syncytiotrophoblastic giant cells. (WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"},{"relation_name":"is_a","term_name":"central nervous system nongerminomatous germ cell tumor","termid":"MONDO:0020574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"choriocarcinoma of the central nervous system","secondary_identifiers":["NCIT:C7012","icd11.foundation:511691786","Orphanet:252015","UMLS:C1332876","GARD:20734","MEDGEN:234100"],"synonyms":[{"name":"central nervous system choriocarcinoma","type":"exact"},{"name":"central nervous system choriocarcinoma (disease)","type":"exact"},{"name":"choriocarcinoma of CNS","type":"exact"},{"name":"choriocarcinoma of the CNS","type":"exact"}],"termid":"MONDO:0016740","xrefs":{"Monarch":{"xref_id":"0016740"}}}


id: GO:0018412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a protein by glucuronidation on an amino acid oxygen atom.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein O-glucuronidation (obsolete GO:0018412)","synonyms":[{"name":"protein amino acid O-glucuronidation","type":"exact"}],"termid":"GO:0018412"}


id: PBO:0071129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 131","termid":"PBO:0071129"}


id: GO:1990700
data:
  {"annotated_genes":["SJAG_02778","SJAG_01075","SJAG_04039","SJAG_01579","SJAG_03844","SJAG_00934","SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111557,112738,113862,89562,103576,107624,91582],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000183"}]},"cv_name":"biological_process","definition":"Any process that results in the specification, formation or maintenance of the physical structure of nucleolar chromatin.","definition_xrefs":["PMID:18362178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"},{"relation_name":"part_of","term_name":"nucleolus organization","termid":"GO:0007000"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_01075":null,"SJAG_01579":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null,"SJAG_04039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"nucleolar chromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment or maintenance of nucleolar chromatin architecture","type":"exact"},{"name":"nucleolar chromatin organisation","type":"exact"}],"termid":"GO:1990700","terms_by_termid":{"GO:0000183":null}}


id: PBO:0087584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); necessary for maintaining sister chromatid cohesion in prophase I of meiosis by inhibiting premature ubiquitination and subsequent degradation of substrates by the APC(Ama1) ubiquitin ligase","termid":"PBO:0087584"}


id: PBO:0075238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX9 antisense RNA 1","termid":"PBO:0075238"}


id: GO:0060319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Erythrocyte differentiation which occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:dph","GOC:add","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"},{"relation_name":"part_of","term_name":"primitive hemopoiesis","termid":"GO:0060215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive erythrocyte differentiation","synonyms":[{"name":"primitive RBC differentiation","type":"exact"},{"name":"primitive erythropoiesis","type":"exact"},{"name":"primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0060319"}


id: GO:2000199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ribonucleoprotein complex localization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"positively_regulates","term_name":"ribonucleoprotein complex localization","termid":"GO:0071166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ribonucleoprotein complex localization","synonyms":[{"name":"positive regulation of RNP localization","type":"exact"},{"name":"positive regulation of cellular ribonucleoprotein complex localization","type":"exact"},{"name":"positive regulation of establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"positive regulation of ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:2000199"}


id: MONDO:0006797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinopathy due to hypertension.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hypertensive retinopathy","secondary_identifiers":["EFO:1000977","ICD9:362.11","MedDRA:10020839","icd11.foundation:218513628","DOID:11561","MEDGEN:101819","MESH:D058437","NCIT:C3514","SCTID:6962006","UMLS:C0152132"],"termid":"MONDO:0006797","xrefs":{"Monarch":{"xref_id":"0006797"}}}


id: PBO:0051620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 2 pseudogene 2","termid":"PBO:0051620"}


id: PBO:0089418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L28","termid":"PBO:0089418"}


id: GO:0072023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thick ascending limb over time, from its formation to the mature structure. The thick ascending limb is the last part of the loop of Henle. Its thick, mitochondria-rich epithelium characterizes the outer medulla, and is responsible for very avid active salt transport. At the macula densa, the thick ascending limb connects to the distal convoluted tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thick ascending limb development","secondary_identifiers":["GO:0072026"],"synonyms":[{"name":"TAL development","type":"exact"}],"termid":"GO:0072023"}


id: MONDO:0004555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiomyolipoma arising from the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"},{"relation_name":"is_a","term_name":"angiomyolipoma","termid":"MONDO:0002603"},{"relation_name":"is_a","term_name":"benign PEComa","termid":"MONDO:0020581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney angiomyolipoma","secondary_identifiers":["NCIT:C3888","UMLS:C0241961","ONCOTREE:RAML","DOID:8411","SCTID:254921004","MEDGEN:69146"],"synonyms":[{"name":"RAML","type":"related"},{"name":"angiomyolipoma of kidney","type":"exact"},{"name":"angiomyolipoma of the kidney","type":"exact"},{"name":"kidney angiomyolipoma","type":"exact"},{"name":"renal angiomyolipoma","type":"exact"}],"termid":"MONDO:0004555","xrefs":{"Monarch":{"xref_id":"0004555"}}}


id: GO:0019909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to and modulates of the activity of [pyruvate dehydrogenase (lipoamide)] phosphatase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete [pyruvate dehydrogenase (lipoamide)] phosphatase regulator activity (obsolete GO:0019909)","synonyms":[{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0019909"}


id: PBO:0000686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferease subunit (predicted)","termid":"PBO:0000686"}


id: PBO:0044490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 46 subfamily A member 4, pseudogene","termid":"PBO:0044490"}


id: PBO:0052767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 59","termid":"PBO:0052767"}


id: MONDO:0021254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of uterus","termid":"MONDO:0021353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus uteri neoplasm","secondary_identifiers":["UMLS:C1263777","MONDO:0021256","SCTID:126909004","NCIT:C6300","MEDGEN:226810","MONDO:0021255"],"synonyms":[{"name":"body of uterus neoplasm","type":"exact"},{"name":"body of uterus neoplasm (disease)","type":"exact"},{"name":"body of uterus tumor","type":"exact"},{"name":"body of uterus tumour","type":"exact"},{"name":"corpus uteri tumor","type":"exact"},{"name":"corpus uteri tumour","type":"exact"},{"name":"neoplasm of body of uterus","type":"exact"},{"name":"neoplasm of corpus uteri","type":"exact"},{"name":"neoplasm of the body of uterus","type":"exact"},{"name":"neoplasm of the corpus uteri","type":"exact"},{"name":"neoplasm of the uterine body","type":"exact"},{"name":"neoplasm of the uterine corpus","type":"exact"},{"name":"neoplasm of uterine body","type":"exact"},{"name":"neoplasm of uterine corpus","type":"exact"},{"name":"tumor of body of uterus","type":"exact"},{"name":"tumor of corpus uteri","type":"exact"},{"name":"tumor of the corpus uteri","type":"exact"},{"name":"tumor of the uterine body","type":"exact"},{"name":"tumor of the uterine corpus","type":"exact"},{"name":"tumor of uterine body","type":"exact"},{"name":"tumor of uterine corpus","type":"exact"},{"name":"tumour of body of uterus","type":"exact"},{"name":"tumour of corpus uteri","type":"exact"},{"name":"tumour of the corpus uteri","type":"exact"},{"name":"tumour of the uterine body","type":"exact"},{"name":"tumour of the uterine corpus","type":"exact"},{"name":"tumour of uterine body","type":"exact"},{"name":"tumour of uterine corpus","type":"exact"},{"name":"uterine body neoplasm","type":"exact"},{"name":"uterine body tumor","type":"exact"},{"name":"uterine body tumour","type":"exact"},{"name":"uterine corpus neoplasm","type":"exact"},{"name":"uterine corpus tumor","type":"exact"},{"name":"uterine corpus tumour","type":"exact"}],"termid":"MONDO:0021254","xrefs":{"Monarch":{"xref_id":"0021254"}}}


id: MONDO:0007421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deafness-ear malformation-facial palsy syndrome is characterized by profound conductive deafness due to stapedial abnormalities associated with variable malformations of the external ears and facial paralysis. It has been described in three sibs and their mother. Inheritance is autosomal dominant.","definition_xrefs":["Orphanet:3232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-ear malformation-facial palsy syndrome","secondary_identifiers":["MESH:C565123","SCTID:716243005","UMLS:C1852292","MEDGEN:338900","OMIM:124490","GARD:1684"],"synonyms":[{"name":"Sellars-Beighton syndrome","type":"exact"},{"name":"deafness, conductive stapedial, with EAR malformation and facial palsy","type":"related"}],"termid":"MONDO:0007421","xrefs":{"Monarch":{"xref_id":"0007421"}}}


id: PBO:0060866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 9","termid":"PBO:0060866"}


id: PBO:0043699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 5","termid":"PBO:0043699"}


id: GO:0044406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host via either adhesion molecules, general stickiness, or other mechanisms. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc","GOC:bf","GOC:dos","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host","secondary_identifiers":["GO:0051856","GO:0051825"],"synonyms":[{"name":"adhesion to host","type":"related"},{"name":"adhesion to other organism during symbiotic interaction","type":"related"},{"name":"adhesion to other organism involved in symbiotic interaction","type":"exact"},{"name":"host adhesion","type":"narrow"}],"termid":"GO:0044406"}


id: GO:1905153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane invagination.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058","PMID:26589353","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"membrane invagination","termid":"GO:0010324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of membrane invagination","termid":"GO:1905153"}


id: SO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The attribute of how many strands are present in a nucleotide polymer.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strand_attribute","synonyms":[{"name":"strand attribute","type":"exact"}],"termid":"SO:0000983"}


id: GO:0018746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-3,4-oxide + H2O = trans-3,4-dihydrodiolphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-3,4-epoxide hydrolase activity (obsolete GO:0018746)","termid":"GO:0018746"}


id: PBO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl6 (predicted)","termid":"PBO:0001579"}


id: MONDO:0013953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary immunodeficiency disease in which the cause of the disease is a mutation in the IFNGR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 28","secondary_identifiers":["UMLS:C4013947","DOID:0111995","MEDGEN:862384","OMIM:614889"],"synonyms":[{"name":"IFNGR2 primary immunodeficiency disease","type":"exact"},{"name":"IMD28","type":"related"},{"name":"Ifngr2 deficiency","type":"related"},{"name":"immunodeficiency 28","type":"exact"},{"name":"immunodeficiency 28, Mycobacteriosis","type":"related"},{"name":"immunodeficiency type 28","type":"exact"},{"name":"primary immunodeficiency disease caused by mutation in IFNGR2","type":"exact"}],"termid":"MONDO:0013953","xrefs":{"Monarch":{"xref_id":"0013953"}}}


id: GO:0033833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxymethylfurfural + NADH + H+ = 2,5-bis-hydroxymethylfuran + NAD+.","definition_xrefs":["PMID:15338422","PMID:16652391","GOC:mah","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxymethylfurfural reductase (NADH) activity","secondary_identifiers":["MetaCyc:RXN-10738"],"termid":"GO:0033833"}


id: GO:0102662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-oxopropanoate + coenzyme A(4-) + NAD(1-) = acetyl-CoA(4-) + carbon dioxide + NADH(2-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity (obsolete GO:0102662)","termid":"GO:0102662"}


id: PBO:0055831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 1","termid":"PBO:0055831"}


id: PBO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat protein","termid":"PBO:0001938"}


id: PBO:0069539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 809, pseudogene","termid":"PBO:0069539"}


id: GO:0047544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biphenyl-2-ol + H+ + NADH + O2 = biphenyl-2,3-diol + H2O + NAD+. Also converts 2,2'-dihydroxybiphenyl into 2,2',3-trihydroxy-biphenyl.","definition_xrefs":["EC:1.14.13.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxybiphenyl 3-monooxygenase (NADH) activity","secondary_identifiers":["KEGG_REACTION:R03964","UM-BBD_reactionID:r1423"],"synonyms":[{"name":"2-hydroxybiphenyl,NADH:oxygen oxidoreductase (3-hydroxylating)","type":"related"}],"termid":"GO:0047544"}


id: PBO:0074466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small muscle protein X-linked","termid":"PBO:0074466"}


id: PBO:0027823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_single-stranded_DNA_binding","termid":"PBO:0027823"}


id: PBO:0072888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding kinase family member 3","termid":"PBO:0072888"}


id: PBO:0053863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1138","termid":"PBO:0053863"}


id: GO:0052497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within the xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves, of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by organism of xylem in other organism involved in symbiotic interaction (obsolete GO:0052497)","synonyms":[{"name":"occlusion by organism of xylem in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052497"}


id: MONDO:0044964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma arising from the minor salivary glands in the oral cavity. It is often asymptomatic and detected during a routine dental examination.","definition_xrefs":["NCIT:C8177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"oral cavity mucoepidermoid carcinoma","secondary_identifiers":["UMLS:C0280309","MEDGEN:83629"],"synonyms":[{"name":"mucoepidermoid carcinoma of oral cavity","type":"exact"},{"name":"mucoepidermoid carcinoma of the oral cavity","type":"exact"},{"name":"oral cavity mucoepidermoid cancer","type":"exact"},{"name":"oral cavity mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0044964","xrefs":{"Monarch":{"xref_id":"0044964"}}}


id: GO:0042594
data:
  {"annotated_genes":["SJAG_00256","SJAG_01509","SJAG_02878","SJAG_01184","SJAG_00457","SJAG_00845","SJAG_00534","SJAG_01885","SJAG_03371","SJAG_02699","SJAG_04677","SJAG_00209","SJAG_03048","SJAG_01970","SJAG_00380","SJAG_03602","SJAG_04067","SJAG_02380","SJAG_02424","SJAG_04873","SJAG_01245","SJAG_03519","SJAG_03309","SJAG_00233","SJAG_04032","SJAG_00169","SJAG_03256","SJAG_00781","SJAG_03486","SJAG_02026","SJAG_02785","SJAG_02973","SJAG_04743","SJAG_04725","SJAG_04031","SJAG_02474"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88932,110407,94723,90816,87536,109129,94184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[99931,115927,97933,92483,110823,88723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042149"},{"annotations":[103272,91961,99975,93609,93617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010106"},{"annotations":[107041,112780,112779,115233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016036"},{"annotations":[100608,91862,98059,103183,79961,117799,108722,94133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009267"},{"annotations":[115029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[103318],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901481"},{"annotations":[102289,103321],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901482"},{"annotations":[87364,100875],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"},{"annotations":[101877],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nourishment.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00233":null,"SJAG_00256":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00534":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01509":null,"SJAG_01885":null,"SJAG_01970":null,"SJAG_02026":null,"SJAG_02380":null,"SJAG_02424":null,"SJAG_02474":null,"SJAG_02699":null,"SJAG_02785":null,"SJAG_02878":null,"SJAG_02973":null,"SJAG_03048":null,"SJAG_03256":null,"SJAG_03309":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03519":null,"SJAG_03602":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04067":null,"SJAG_04677":null,"SJAG_04725":null,"SJAG_04743":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to starvation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0042594","terms_by_termid":{"GO:0009267":null,"GO:0010106":null,"GO:0016036":null,"GO:0031142":null,"GO:0034198":null,"GO:0042149":null,"GO:1901481":null,"GO:1901482":null,"GO:1904547":null,"GO:1905287":null}}


id: GO:0090248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that contributes to somitogenic axis elongation.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"axis elongation involved in somitogenesis","termid":"GO:0090245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in somitogenic axis elongation","secondary_identifiers":["GO:0090247"],"synonyms":[{"name":"cell motility involved in somitogenic axis elongation","type":"broad"}],"termid":"GO:0090248"}


id: MONDO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clonal neoplasm of small B-lymphocytes, lymphoplasmacytoid cells, and plasma cells involving the bone marrow, lymph nodes, and the spleen. The majority of patients have a serum IgM paraprotein.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell neoplasm","termid":"MONDO:0004095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"lymphoplasmacytic lymphoma","secondary_identifiers":["NCIT:C3212","icd11.foundation:2058944823","ONCOTREE:LPL","MEDGEN:473052","UMLS:C0334633","ICDO:9671/3","DOID:0050747","ICD9:273.3","SCTID:190817009","ICDO:9761/3"],"synonyms":[{"name":"Immunocytoma, lymphoplasmacytic type","type":"exact"},{"name":"lymphoma, lymphoplasmacytic, malignant","type":"exact"},{"name":"lymphoma, plasmacytic","type":"exact"},{"name":"lymphoplasmacytic lymphoma","type":"exact"},{"name":"lymphoplasmacytic lymphoma (Waldenstrom macroglobulinemia)","type":"exact"},{"name":"lymphoplasmacytoid lymphoma","type":"exact"}],"termid":"MONDO:0000432","xrefs":{"Monarch":{"xref_id":"0000432"}}}


id: PBO:0090203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nob1","termid":"PBO:0090203"}


id: FYPO:0005067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane (DETA NONOate). Cells stop growing (and may die) at a concentration of 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","synonyms":[{"name":"hypersensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","type":"exact"},{"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane during mitotic cell cycle","type":"related"},{"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane during vegetative growth","type":"exact"},{"name":"sensitive to DETA NONOate","type":"exact"},{"name":"sensitive to diethylenetriamine NONOate","type":"exact"}],"termid":"FYPO:0005067"}


id: PBO:0074800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13E","termid":"PBO:0074800"}


id: PBO:0062486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 2","termid":"PBO:0062486"}


id: PBO:0004113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv41 (predicted)","termid":"PBO:0004113"}


id: PBO:0059369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 2","termid":"PBO:0059369"}


id: MONDO:0700027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome X is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonosome anomaly","termid":"MONDO:0020058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X disorder","termid":"MONDO:0700027","xrefs":{"Monarch":{"xref_id":"0700027"}}}


id: RO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a specifically dependent continuant (the dependent), in which the dependent specifically depends on the bearer for its existence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bearer_of","termid":"RO:0000053"}


id: GO:2000568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of memory T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of memory T cell activation","termid":"GO:2000567"},{"relation_name":"positively_regulates","term_name":"memory T cell activation","termid":"GO:0035709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of memory T cell activation","termid":"GO:2000568"}


id: MONDO:0017491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tibial hemimelia","termid":"MONDO:0010144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibial hemimelia, bilateral","secondary_identifiers":["MEDGEN:1776601","Orphanet:295079","UMLS:C5438440","icd11.foundation:1562926182"],"synonyms":[{"name":"tibial longitudinal meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017491","xrefs":{"Monarch":{"xref_id":"0017491"}}}


id: PBO:0069476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 743, pseudogene","termid":"PBO:0069476"}


id: GO:0098572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the plastid thylakoid membrane that faces the stroma, and any proteins embedded in it or loosely bound to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"plastid thylakoid membrane","termid":"GO:0055035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"stromal side of plastid thylakoid membrane","termid":"GO:0098572"}


id: GO:0120083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcompartment of the rough endoplasmic reticulum consisting of lumenal expansion into a flattened, disc-shaped cavity.","definition_xrefs":["PMID:12112448","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum","termid":"GO:0005791"},{"relation_name":"part_of","term_name":"endoplasmic reticulum cisternal network","termid":"GO:0071781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"rough endoplasmic reticulum cisterna","termid":"GO:0120083"}


id: MONDO:0008139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OSLAM syndrome is characterized by the association of osteosarcoma, limb anomalies (clinodactyly with brachymesophalangy, bilateral radioulnar synostosis and absence of one digital ray of the foot) and red cell macrocytosis without anemia.","definition_xrefs":["Orphanet:2760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSLAM syndrome","secondary_identifiers":["SCTID:733064004","MESH:C537138","OMIM:165660","GARD:4129","MEDGEN:331588","UMLS:C1833792"],"synonyms":[{"name":"OSLAM syndrome","type":"exact"},{"name":"osteosarcoma, limb anomalies (clinodactyly, absence of digital ray in foot, bilateral radioulnar synostosis) and macrocytosis without anaemia","type":"related"},{"name":"osteosarcoma, limb anomalies (clinodactyly, absence of digital ray in foot, bilateral radioulnar synostosis) and macrocytosis without anemia","type":"related"},{"name":"osteosarcoma, limb anomalies, and erythroid macrocytosis with megaloblastic marrow","type":"related"},{"name":"osteosarcoma, limb anomalies, and macrocytosis","type":"related"},{"name":"osteosarcoma-limb anomalies-erythroid macrocytosis syndrome","type":"exact"}],"termid":"MONDO:0008139","xrefs":{"Monarch":{"xref_id":"0008139"}}}


id: PBO:0050410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPD divergent transcript","termid":"PBO:0050410"}


id: PBO:0087365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific homolog of the CDC3/10/11/12 family of genes; meiotic septin expressed at high levels during meiotic divisions and ascospore formation; the yeast CDC3/10/11/12 family is a family of bud neck microfilament genes","termid":"PBO:0087365"}


id: PBO:0110260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb11","termid":"PBO:0110260"}


id: PBO:0055665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINGO1 antisense RNA 2","termid":"PBO:0055665"}


id: GO:0044774
data:
  {"annotated_genes":["SJAG_01076","SJAG_01084","SJAG_03720","SJAG_03048","SJAG_01010","SJAG_01429","SJAG_04140","SJAG_01044","SJAG_03160","SJAG_02026","SJAG_00640","SJAG_04280","SJAG_02576","SJAG_01680","SJAG_01146","SJAG_05373","SJAG_00623","SJAG_00327","SJAG_03942","SJAG_03927","SJAG_00364","SJAG_03529","SJAG_01205","SJAG_01855","SJAG_02563","SJAG_02266","SJAG_00429","SJAG_01605","SJAG_01677","SJAG_03898","SJAG_02074","SJAG_04287","SJAG_03695","SJAG_00169","SJAG_00486","SJAG_03026","SJAG_01873","SJAG_02098","SJAG_04332","SJAG_01708","SJAG_02771","SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98690,106083,113702,115449,117151,77532,91301,113912,79553,93444,108773,93066,115678,110650,101847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[111484,116246,93466,93445,98691,92035,106084,107301,116716,102805,115505,116547,108774,90941,88632,100028,98857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[90817,109132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[90942,98859,116461,91302,100543,111180,100029,108775,93446,117152,113703,106085,88633,88062,89724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[94046,100348,115506,115507,88679,101013,92036,90943,98860,111181,101849,95515,106086,98692,111485,89959,88634,116548,107131,88063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signaling process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA during mitosis. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and ends with signal transduction.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03529":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902403","GO:0070683"],"synonyms":[{"name":"intracellular signal transduction involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"intracellular signal transduction involved in topo II checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"narrow"},{"name":"intracellular signal transduction pathway involved in topo II checkpoint","type":"narrow"},{"name":"intracellular signal transduction pathway involved in topoisomerase II checkpoint","type":"narrow"},{"name":"intracellular signaling cascade involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in topo II checkpoint","type":"exact"},{"name":"intracellular signaling chain involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signaling chain involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"related"},{"name":"intracellular signaling pathway involved in topo II checkpoint","type":"narrow"},{"name":"intracellular signaling pathway involved in topoisomerase II checkpoint","type":"related"},{"name":"mitotic DNA integrity checkpoint","type":"exact"},{"name":"mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"signal transduction via intracellular signaling cascade involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in topo II checkpoint","type":"related"}],"termid":"GO:0044774","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0044773":null}}


id: GO:1900861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cordyol C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"cordyol C biosynthetic process","termid":"GO:1900799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of cordyol C biosynthetic process","termid":"GO:1900861"}


id: MONDO:0100477
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018767"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that has its basis in the disruption of methylamine metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peptide and amine metabolism","termid":"MONDO:0100473"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of methylamine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100477","terms_by_termid":{"MONDO:0018767":null},"xrefs":{"Monarch":{"xref_id":"0100477"}}}


id: MONDO:0019963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine neoplasm that involves the bronchus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial neoplasm","termid":"MONDO:0002807"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchial endocrine tumor","secondary_identifiers":["Orphanet:97287","GARD:19360"],"synonyms":[{"name":"bronchial NET","type":"exact"},{"name":"bronchial neuroendocrine tumor","type":"related"},{"name":"bronchial neuroendocrine tumour","type":"related"},{"name":"bronchus NET","type":"exact"},{"name":"bronchus neuroendocrine neoplasm","type":"exact"},{"name":"bronchus neuroendocrine tumor","type":"exact"},{"name":"bronchus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"bronchus neuroendocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of bronchus","type":"exact"}],"termid":"MONDO:0019963","xrefs":{"Monarch":{"xref_id":"0019963"}}}


id: GO:1903934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA primase activity.","definition_xrefs":["PMID:14766746","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"positive regulation of RNA biosynthetic process","termid":"GO:1902680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA primase activity","synonyms":[{"name":"activation of DNA primase activity","type":"narrow"},{"name":"up regulation of DNA primase activity","type":"exact"},{"name":"up-regulation of DNA primase activity","type":"exact"},{"name":"upregulation of DNA primase activity","type":"exact"}],"termid":"GO:1903934"}


id: GO:0015394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: uridine(out) + H+(out) = uridine(in) + H+(in).","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridine transmembrane transporter activity","termid":"GO:0015213"},{"relation_name":"is_a","term_name":"nucleoside:proton symporter activity","termid":"GO:0015506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"uridine:proton symporter activity","synonyms":[{"name":"nucleoside (uridine) permease activity","type":"related"},{"name":"uridine:hydrogen ion symporter activity","type":"exact"}],"termid":"GO:0015394"}


id: GO:0002536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases following a stimulus as part of an inflammatory response; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals, resulting in an increase in their intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"},{"relation_name":"is_a","term_name":"respiratory burst involved in defense response","termid":"GO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst involved in inflammatory response","synonyms":[{"name":"oxidative burst during acute inflammatory response","type":"broad"},{"name":"production of reactive oxygen species during acute inflammatory response","type":"broad"},{"name":"respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002536"}


id: PBO:0069634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 911, pseudogene","termid":"PBO:0069634"}


id: MONDO:0700178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oral squamous cell carcinoma that occurs in a cat.","definition_xrefs":["NCIT:C132824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"mouth disorder, non-human animal","termid":"MONDO:1011333"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline oral squamous cell carcinoma","termid":"MONDO:0700178","xrefs":{"Monarch":{"xref_id":"0700178"}}}


id: _global:negatively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of negatively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulated_by","secondary_identifiers":["RO:0002335"],"termid":"_global:negatively_regulated_by"}


id: MONDO:0009206
data:
  {"annotated_genes":["SJAG_02839"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85852],"is_not":false,"summary":null,"term":"MONDO:0009206"}]},"cv_name":"mondo","definition":"Any combined deficiency of factor V and factor VIII in which the cause of the disease is a mutation in the LMAN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined deficiency of factor V and factor VIII","termid":"MONDO:0018175"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02839":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor V and factor VIII, combined deficiency of, type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18630","OMIM:227300","SCTID:84048006","MEDGEN:1637212","UMLS:C4551981"],"synonyms":[{"name":"F5F8D1","type":"related"},{"name":"FMFD 1","type":"related"},{"name":"LMAN1 combined deficiency of factor V and factor VIII","type":"exact"},{"name":"combined deficiency of factor V and factor VIII caused by mutation in LMAN1","type":"exact"},{"name":"combined factor V and VIII deficiency","type":"exact"},{"name":"factor 5 and Factor VIII, combined deficiency of, 1","type":"exact"},{"name":"factor V and factor VIII, combined deficiency of, 1","type":"related"},{"name":"factor V and factor VIII, combined deficiency of, type 1","type":"exact"},{"name":"familial multiple coagulation Factor deficiency 1","type":"related"},{"name":"multiple coagulation Factor deficiency 1","type":"related"}],"termid":"MONDO:0009206","terms_by_termid":{"MONDO:0009206":null},"xrefs":{"Monarch":{"xref_id":"0009206"}}}


id: PBO:0079111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 2 pseudogene 1","termid":"PBO:0079111"}


id: PBO:0089615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-Golgi vesicle-mediated transport protein Avl9","termid":"PBO:0089615"}


id: PBO:0073127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC13 homolog, nuclear pore and COPII coat complex component pseudogene 1","termid":"PBO:0073127"}


id: PBO:0004329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic-spindle disanchored Msd1","termid":"PBO:0004329"}


id: PBO:0085013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulatory subunit of protein phosphatase 1 (Ppz1p); involved in coenzyme A biosynthesis; subunit of phosphopantothenoylcysteine decarboxylase (PPCDC: Cab3p, Sis2p, Vhs3p) complex and the CoA-Synthesizing Protein Complex (CoA-SPC: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p); SIS2 has a paralog, VHS3, that arose from the whole genome duplication","termid":"PBO:0085013"}


id: PBO:0045824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 14","termid":"PBO:0045824"}


id: GO:0060199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing glutamate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted glutamate transport vesicle","synonyms":[{"name":"clathrin sculpted glutamate constitutive secretory pathway transport vesicle","type":"exact"},{"name":"clathrin sculpted glutamate transport vesicle","type":"exact"}],"termid":"GO:0060199"}


id: PBO:0043563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 2 chain","termid":"PBO:0043563"}


id: PBO:0067368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 469, pseudogene","termid":"PBO:0067368"}


id: GO:0032153
data:
  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eventual plane of cell division (also known as cell cleavage or cytokinesis) in a dividing cell. In Eukaryotes, the cleavage apparatus, composed of septin structures and the actomyosin contractile ring, forms along this plane, and the mitotic, or meiotic, spindle is aligned perpendicular to the division plane. 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id: PBO:0074469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine synthase","termid":"PBO:0074469"}


id: PBO:0082020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 family member A, cell cycle regulator","termid":"PBO:0082020"}


id: PBO:0060249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL proto-oncogene, bHLH transcription factor","termid":"PBO:0060249"}


id: PBO:0085734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in threonylcarbamoyl adenosine biosynthesis; Sua5p and Qri7p are necessary and sufficient for RNA t6A modification in vitro; highly conserved mitochondrial protein; essential for t6A modification of mitochondrial tRNAs that decode ANN codons; similar to Kae1p and E. coli YgjD, both of which are also required for tRNA t6A modification; when directed to the cytoplasm, complements the essential function of Kae1p in the KEOPS complex","termid":"PBO:0085734"}


id: MONDO:0003693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm characterized by the presence of cystic glandular and fibrous tissues and clear cells.","definition_xrefs":["NCIT:C8988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenofibroma","termid":"MONDO:0003460"},{"relation_name":"is_a","term_name":"cystadenofibroma","termid":"MONDO:0003464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell cystadenofibroma","secondary_identifiers":["DOID:5895","MEDGEN:235121","UMLS:C1377853"],"synonyms":[{"name":"clear cell cystadenofibroma","type":"exact"}],"termid":"MONDO:0003693","xrefs":{"Monarch":{"xref_id":"0003693"}}}


id: GO:0047193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: CDP-acylglycerol + arachidonyl-CoA = CDP-diacylglycerol + CoA.","definition_xrefs":["EC:2.3.1.70","MetaCyc:2.3.1.70-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete CDP-acylglycerol O-arachidonoyltransferase activity (obsolete GO:0047193)","synonyms":[{"name":"CDP-acylglycerol O-arachidonoyltransferase activity","type":"exact"},{"name":"CDP-acylglycerol O-arachidonyltransferase activity","type":"exact"},{"name":"CDPacylglycerol O-arachidonyltransferase activity","type":"related"},{"name":"arachidonoyl-CoA:CDP-acylglycerol O-arachidonoyltransferase activity","type":"related"},{"name":"arachidonyl-CoA:CDP-acylglycerol O-arachidonyltransferase activity","type":"related"}],"termid":"GO:0047193"}


id: PBO:0070885
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 17","termid":"PBO:0070885"}


id: PBO:0055112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2531","termid":"PBO:0055112"}


id: PBO:0024832
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYosin II of Pombe","termid":"PBO:0024832"}


id: PR:Q9P7I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC105.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7I0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat-containing protein C105.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC105.02c","synonyms":[{"name":"Spom972h-SPAC105.02c","type":"exact"}],"termid":"PR:Q9P7I0"}


id: MONDO:0003024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the breast.","definition_xrefs":["NCIT:C5184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast angiosarcoma","secondary_identifiers":["MEDGEN:272382","GARD:9974","UMLS:C1332614","DOID:4511","MESH:C536368","ONCOTREE:BA"],"synonyms":[{"name":"BA","type":"related"},{"name":"angiosarcoma (disease) of breast","type":"exact"},{"name":"angiosarcoma of breast","type":"exact"},{"name":"angiosarcoma of the breast","type":"exact"},{"name":"breast angiosarcoma","type":"exact"},{"name":"breast angiosarcoma (disease)","type":"exact"},{"name":"breast hemangiosarcoma","type":"exact"},{"name":"hemangiosarcoma of breast","type":"exact"},{"name":"hemangiosarcoma of the breast","type":"exact"}],"termid":"MONDO:0003024","xrefs":{"Monarch":{"xref_id":"0003024"}}}


id: GO:0102253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: neoagarobiose + H2O = 3,6-anhydro-alpha-L-galactopyranose + beta-D-galactoside.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete neoagarobiose 1,3-alpha-3,6-anhydro-L-galactosidase activity (obsolete GO:0102253)","termid":"GO:0102253"}


id: PBO:0065747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase 2","termid":"PBO:0065747"}


id: PBO:0053498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 477","termid":"PBO:0053498"}


id: GO:0050175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + H2O + NAD+ = phenylpyruvate + NH3 + NADH.","definition_xrefs":["MetaCyc:PHENYLALANINE-DEHYDROGENASE-RXN","EC:1.4.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenylalanine dehydrogenase activity","secondary_identifiers":["RHEA:21408"],"synonyms":[{"name":"L-phenylalanine dehydrogenase activity","type":"related"},{"name":"L-phenylalanine:NAD+ oxidoreductase (deaminating)","type":"related"},{"name":"PHD","type":"related"},{"name":"PheDH activity","type":"related"}],"termid":"GO:0050175"}


id: MONDO:0030538
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 34, myoclonic","secondary_identifiers":["MEDGEN:1805016","UMLS:C5676907","DOID:0060957","OMIM:619724"],"synonyms":[{"name":"DYT34","type":"exact"}],"termid":"MONDO:0030538","xrefs":{"Monarch":{"xref_id":"0030538"}}}


id: GO:1901128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gentamycin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gentamycin metabolic process","synonyms":[{"name":"gentamycin metabolism","type":"exact"}],"termid":"GO:1901128"}


id: FYPO:0004202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which spliced forms of RNAs transcribed from dg repeats in the centromere outer repeat region are present at lower levels than normal.","definition_xrefs":["PMID:25274039","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased centromeric outer repeat transcript level","termid":"FYPO:0003094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased spliced cen-dg RNA level","synonyms":[{"name":"decreased level of spliced cen-dg RNA","type":"exact"},{"name":"decreased level of spliced cen-dg transcripts","type":"exact"},{"name":"decreased level of spliced centromeric dg repeat RNA","type":"exact"},{"name":"decreased level of spliced centromeric dg repeat transcripts","type":"exact"},{"name":"decreased spliced cen-dg RNA accumulation","type":"related"},{"name":"decreased spliced cen-dg RNA level during mitotic cell cycle","type":"related"},{"name":"decreased spliced cen-dg RNA level during vegetative growth","type":"exact"},{"name":"decreased spliced cen-dg transcript level","type":"exact"},{"name":"reduced spliced cen-dg RNA level","type":"exact"}],"termid":"FYPO:0004202"}


id: PBO:0030737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_arrest_in_mitotic_G1_phase_during_nitrogen_starvation","termid":"PBO:0030737"}


id: FYPO:0002120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sodium:hydrogen antiporter activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transmembrane transporter activity","termid":"FYPO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002114"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652","FYPO:0000257","FYPO:0002114"],"is_obsolete":false,"name":"normal sodium:hydrogen antiporter activity","termid":"FYPO:0002120"}


id: GO:0010457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the two centrioles within a centrosome remain tightly paired.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"centriole-centriole cohesion","termid":"GO:0010457"}


id: PBO:0014253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insertional Suppressor of Sme2","termid":"PBO:0014253"}


id: GO:1990567
data:
  {"annotated_genes":["SJAG_01599","SJAG_03500","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99791,111400,117653],"is_not":false,"summary":null,"term":"GO:1990567"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex that in S. pombe consists of the proteins Dis2, Ppn1, and Swd22.","definition_xrefs":["PMID:24945319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01599":null,"SJAG_03126":null,"SJAG_03500":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DPS complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990567","terms_by_termid":{"GO:1990567":null}}


id: PBO:0087467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a replication-pausing checkpoint complex; Tof1p-Mrc1p-Csm3p acts at the stalled replication fork to promote sister chromatid cohesion after DNA damage, facilitating gap repair of damaged DNA; interacts with the MCM helicase; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087467"}


id: PATO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A complete three dimensional shape in which there is a line connecting pair of points on the object that lies outside the object. Or: a shape with cavities. Contrast: concave.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"has_part","term_name":"concave","termid":"PATO:0001857"},{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concave 3-D shape","secondary_identifiers":["Image:http\\://en.wikipedia.org/wiki/Image\\:Convex_polygon_illustration2.png"],"termid":"PATO:0002008"}


id: GO:0034793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyclopropanecarboxylate + CoASH = cyclopropanecarboxyl-CoA + OH-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclopropanecarboxylate-CoA ligase activity (obsolete GO:0034793)","termid":"GO:0034793"}


id: PBO:0108696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp51","termid":"PBO:0108696"}


id: GO:0015372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (glutamate or aspartate)(out) + Na+(out) = (glutamate or aspartate)(in) + Na+(in).","definition_xrefs":["TC:2.A.23.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate/aspartate:sodium symporter activity (obsolete GO:0015372)","synonyms":[{"name":"glutamate/aspartate:sodium symporter activity","type":"exact"}],"termid":"GO:0015372"}


id: MONDO:0021683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE A disease that can be transmitted from one organism to another, typically but not always by an infectious process.","gene_count":0,"genotype_count":0,"name":"obsolete transmissible disease (obsolete MONDO:0021683)","termid":"MONDO:0021683","xrefs":{"Monarch":{"xref_id":"0021683"}}}


id: PR:P87126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf2 gene.","definition_xrefs":["UniProtKB:P87126","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.11c","synonyms":[{"name":"Spom972h-cwf2","type":"exact"},{"name":"complexed with cdc5 protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-mRNA-processing protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87126"}


id: GO:0038169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by somatostatin binding to the somatostatin receptor (SSTR) on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:18006219","PMID:8769369","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"somatostatin receptor signaling pathway","synonyms":[{"name":"SST receptor signaling pathway","type":"exact"},{"name":"SSTR signaling pathway","type":"related"}],"termid":"GO:0038169"}


id: GO:0072547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricoumaroyl spermidine + NADPH + O2 = dicoumaroyl monocaffeoyl spermidine + NADP+ + H2O.","definition_xrefs":["PMID:19779199","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tricoumaroylspermidine meta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11260"],"synonyms":[{"name":"tricoumaroyl spermidine meta-hydroxylase activity","type":"exact"}],"termid":"GO:0072547"}


id: PBO:0065762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridine nucleotide-disulphide oxidoreductase domain 2","termid":"PBO:0065762"}


id: PBO:0005548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk33 (predicted)","termid":"PBO:0005548"}


id: GO:0002939
data:
  {"annotated_genes":["SJAG_00255","SJAG_04993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98906,100870],"is_not":false,"summary":null,"term":"GO:0002939"}]},"cv_name":"biological_process","definition":"The process whereby a guanine in tRNA is methylated at position N1 of the guanine.","definition_xrefs":["ISBN:155581073X","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_04993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA N1-guanine methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA m1-guanine biosynthesis","type":"related"}],"termid":"GO:0002939","terms_by_termid":{"GO:0002939":null}}


id: MONDO:0032878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with behavioral abnormalities, absent speech, and hypotonia","secondary_identifiers":["MEDGEN:1684663","OMIM:618718","UMLS:C5231471"],"synonyms":[{"name":"NEDBASH","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH BEHAVIORAL ABNORMALITIES, ABSENT SPEECH, AND HYPOTONIA","type":"related"}],"termid":"MONDO:0032878","xrefs":{"Monarch":{"xref_id":"0032878"}}}


id: PBO:0065077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 4","termid":"PBO:0065077"}


id: PBO:0028436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_myriocin_during_vegetative_growth","termid":"PBO:0028436"}


id: GO:0048550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pinocytosis. Pinocytosis is the process in which cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of pinocytosis","termid":"GO:0048548"},{"relation_name":"negatively_regulates","term_name":"pinocytosis","termid":"GO:0006907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of pinocytosis","synonyms":[{"name":"down regulation of pinocytosis","type":"exact"},{"name":"down-regulation of pinocytosis","type":"exact"},{"name":"downregulation of pinocytosis","type":"exact"},{"name":"inhibition of pinocytosis","type":"narrow"}],"termid":"GO:0048550"}


id: PBO:0053894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1179","termid":"PBO:0053894"}


id: PR:Q9HDW9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12993:SF2","OMA:SCHPO01136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.01c","secondary_identifiers":["UniProtKB:Q9HDW9"],"synonyms":[{"name":"Spom972h-PIGL","type":"exact"}],"termid":"PR:Q9HDW9"}


id: PR:O13671
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exportin-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02811","PRO:DNx","PANTHER:PTHR10997:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin-alpha re-exporter (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.05","secondary_identifiers":["UniProtKB:O13671"],"synonyms":[{"name":"Spom972h-CSE1L","type":"exact"},{"name":"cellular apoptosis susceptibility protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13671"}


id: PR:P87118
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inorganic pyrophosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00572","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase C3A12.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.02","secondary_identifiers":["UniProtKB:P87118"],"synonyms":[{"name":"PPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPA1","type":"exact"},{"name":"pyrophosphate phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87118"}


id: GO:0004449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH.","definition_xrefs":["RHEA:23632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isocitrate dehydrogenase [NAD(P)+] activity","termid":"GO:0004448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.1.1.41","Reactome:R-HSA-70967"],"synonyms":[{"name":"NAD dependent isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD isocitric dehydrogenase activity","type":"exact"},{"name":"NAD-linked isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD-specific isocitrate dehydrogenase activity","type":"exact"},{"name":"isocitrate dehydrogenase (NAD) activity","type":"exact"},{"name":"isocitrate:NAD+ oxidoreductase (decarboxylating)","type":"exact"},{"name":"nicotinamide adenine dinucleotide isocitrate dehydrogenase activity","type":"exact"}],"termid":"GO:0004449"}


id: GO:0086043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a bundle of His cell.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"},{"relation_name":"part_of","term_name":"bundle of His cell to Purkinje myocyte signaling","termid":"GO:0086028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"bundle of His cell action potential","synonyms":[{"name":"bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086043"}


id: GO:0036162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of oxytocin, a cyclic nonapeptide hormone with amino acid sequence CYIQNCPLG, due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Oxytocin is the principal uterine-contracting and milk-ejecting hormone of the posterior pituitary, and together with the neuropeptide vasopressin, is believed to influence social cognition and behavior. It also acts as a neurotransmitter in the brain.","definition_xrefs":["GOC:cjm","Wikipedia:Oxytocin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"oxytocin production","synonyms":[{"name":"oxytocin biosynthesis","type":"narrow"},{"name":"oxytocin secretion","type":"narrow"}],"termid":"GO:0036162"}


id: FYPO:0002520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population undergoes conjugation with wild type h+ cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased conjugation frequency","termid":"FYPO:0000303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased frequency of conjugation with h+ cells","synonyms":[{"name":"decreased conjugation with WT h+ cells","type":"exact"},{"name":"decreased frequency of conjugation with h plus cells","type":"exact"},{"name":"decreased frequency of mating with h+ cells","type":"exact"},{"name":"reduced frequency of conjugation with h+ cells","type":"exact"}],"termid":"FYPO:0002520"}


id: FYPO:0006705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more pentose phosphates measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular pentose phosphate level","synonyms":[{"name":"decreased cellular pentose phosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular pentose phosphate level during vegetative growth","type":"exact"},{"name":"decreased cellular pentose-phosphate level","type":"exact"},{"name":"decreased pentose phosphate accumulation","type":"related"},{"name":"reduced cellular pentose phosphate level","type":"exact"}],"termid":"FYPO:0006705"}


id: PBO:0070300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 6","termid":"PBO:0070300"}


id: PBO:0012035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein involved in ER-nucleus signaling (predicted)","termid":"PBO:0012035"}


id: PBO:0028180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cysteine_synthase_activity","termid":"PBO:0028180"}


id: GO:0047192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-sn-glycero-3-phosphocholine + acetyl-CoA = 1-alkyl-2-acetyl-sn-glycero-3-phosphocholine + CoA.","definition_xrefs":["MetaCyc:2.3.1.67-RXN","EC:2.3.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"1-alkylglycerophosphocholine O-acetyltransferase activity","secondary_identifiers":["RHEA:18461"],"synonyms":[{"name":"1-alkyl-2-lyso-sn-glycero-3-phosphocholine acetyltransferase activity","type":"related"},{"name":"1-alkyl-2-lysolecithin acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:1-alkyl-2-lyso-sn-glycero-3-phosphocholine 2-O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:1-alkyl-sn-glycero-3-phosphocholine 2-O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:lyso-PAF acetyltransferase activity","type":"related"},{"name":"acyl-CoA:1-alkyl-sn-glycero-3-phosphocholine acyltransferase activity","type":"related"},{"name":"blood platelet-activating factor acetyltransferase activity","type":"broad"},{"name":"lyso-GPC:acetyl CoA acetyltransferase activity","type":"broad"},{"name":"lyso-platelet activating factor:acetyl-CoA acetyltransferase activity","type":"broad"},{"name":"lyso-platelet-activating factor:acetyl-CoA acetyltransferase activity","type":"broad"},{"name":"lysopaf:acetyl CoA acetyltransferase activity","type":"broad"},{"name":"platelet-activating factor acylhydrolase activity","type":"broad"},{"name":"platelet-activating factor-synthesizing enzyme activity","type":"broad"}],"termid":"GO:0047192"}


id: PBO:0005365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase, Arb family ABCF1-like (predicted)","termid":"PBO:0005365"}


id: MONDO:0009695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"myeloproliferative disease, autosomal recessive","secondary_identifiers":["MEDGEN:338119","MESH:C564977","OMIM:254700","UMLS:C1850779"],"synonyms":[{"name":"myeloproliferative disease, autosomal recessive","type":"exact"}],"termid":"MONDO:0009695","xrefs":{"Monarch":{"xref_id":"0009695"}}}


id: MONDO:0018036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency due to absence of thymus (obsolete MONDO:0018036)","secondary_identifiers":["Orphanet:331220"],"termid":"MONDO:0018036","xrefs":{"Monarch":{"xref_id":"0018036"}}}


id: PBO:0055071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2488","termid":"PBO:0055071"}


id: PBO:0081611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 536","termid":"PBO:0081611"}


id: PBO:0081692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 614","termid":"PBO:0081692"}


id: PBO:0079995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 33","termid":"PBO:0079995"}


id: PBO:0087657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HIR complex; HIR is a nucleosome assembly complex involved in regulation of histone gene transcription; mutants display synthetic defects with subunits of FACT, a complex that allows passage of RNA Pol II through nucleosomes","termid":"PBO:0087657"}


id: FYPO:0008029
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119008],"is_not":false,"summary":null,"term":"FYPO:0008029"}]},"cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed during fungal hyphal growth phase in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost.","definition_xrefs":["PMID:36058798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell lysis","termid":"FYPO:0002488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"cell lysis during hyphal growth phase","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"termid":"FYPO:0008029","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0008029":null}}


id: GO:0021593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the rhombomere is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.","definition_xrefs":["ISBN:0838580343","GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere morphogenesis","termid":"GO:0021593"}


id: PBO:0053605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 638","termid":"PBO:0053605"}


id: PBO:0004501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT II complex subunit Vps25","termid":"PBO:0004501"}


id: GO:0010853
data:
  {"annotated_genes":["SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010856"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an enzyme that catalyzes a ring closure reaction.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"cyclase regulator activity","termid":"GO:0010851"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"cyclase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010853","terms_by_termid":{"GO:0010856":null}}


id: MONDO:0016054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","termid":"MONDO:0015219"}],"gene_count":0,"genotype_count":0,"name":"obsolete cerebral malformation (obsolete MONDO:0016054)","secondary_identifiers":["Orphanet:199633","NANDO:2100217"],"synonyms":[{"name":"brain malformation","type":"exact"}],"termid":"MONDO:0016054","xrefs":{"Monarch":{"xref_id":"0016054"}}}


id: PBO:0085613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex","termid":"PBO:0085613"}


id: PBO:0073618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 1","termid":"PBO:0073618"}


id: GO:0009406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete virulence (obsolete GO:0009406)","synonyms":[{"name":"virulence","type":"exact"}],"termid":"GO:0009406"}


id: FYPO:0000109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to papulacandin B. Cells stop growing (and may die) at a concentration of papulacandin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to papulacandin B","synonyms":[{"name":"hypersensitive to papulacandin B","type":"exact"},{"name":"sensitive to papulacandin B during mitotic cell cycle","type":"related"},{"name":"sensitive to papulacandin B during vegetative growth","type":"exact"}],"termid":"FYPO:0000109"}


id: GO:0047116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate = NADH + CO2 + catechol.","definition_xrefs":["MetaCyc:1.3.1.25-RXN","EC:1.3.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase activity","secondary_identifiers":["RHEA:11560"],"synonyms":[{"name":"(1R,6R)-1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"2-hydro-1,2-dihydroxybenzoate dehydrogenase activity","type":"related"},{"name":"3,5-cyclohexadiene-1,2-diol-1-carboxylate dehydrogenase activity","type":"related"},{"name":"3,5-cyclohexadiene-1,2-diol-1-carboxylic acid dehydrogenase activity","type":"related"},{"name":"DHB dehydrogenase activity","type":"related"},{"name":"DHBDH activity","type":"related"},{"name":"cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate:NAD(+) oxidoreductase activity","type":"related"},{"name":"cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate:NAD+ oxidoreductase activity","type":"related"},{"name":"dihydrodihydroxybenzoate dehydrogenase activity","type":"related"}],"termid":"GO:0047116"}


id: _global:enabled_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of enables","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enabled_by","secondary_identifiers":["RO:0002333"],"termid":"_global:enabled_by"}


id: MONDO:0003472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious infestation of parasitic insects found on the head (Pediculus humanus capitis), body (Pediculus humanus corporis), or pubic area (Pthirus pubis) that typically cause itching and rash.","definition_xrefs":["NCIT:C128401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic ectoparasitic infectious disease","termid":"MONDO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lice infestation","secondary_identifiers":["ICD10CM:B85.2","MEDGEN:18339","MESH:D010373","UMLS:C0030756","DOID:5502","ICD9:132.9"],"synonyms":[{"name":"Pediculus humanus infection","type":"exact"},{"name":"infections, Pediculus humanus","type":"related"},{"name":"infestation by Pediculus","type":"exact"},{"name":"louse infestation","type":"exact"},{"name":"louse infestation (& [pediculosis and Phthirus] or [lice])","type":"exact"},{"name":"mixed pediculosis","type":"exact"},{"name":"mixed pediculosis infestation","type":"exact"},{"name":"pediculosis","type":"exact"},{"name":"pediculosis + lice","type":"exact"},{"name":"pediculosis and Phthirus infection","type":"exact"},{"name":"pediculosis and Phthirus infections","type":"exact"},{"name":"pediculosis and Phthirus infestation","type":"exact"},{"name":"pediculosis, unspecified","type":"exact"}],"termid":"MONDO:0003472","xrefs":{"Monarch":{"xref_id":"0003472"}}}


id: MONDO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adiaspiromycosis is a rare fungal infection in the lung and is caused by inhalation of spores of the saprophytic soil fungus Chrysosporium parvum var crescens (previously known as Emmonsia crescens).","direct_ancestors":[{"relation_name":"is_a","term_name":"primary systemic mycosis","termid":"MONDO:0000308"},{"relation_name":"is_a","term_name":"fungal lung infectious disease","termid":"MONDO:0005766"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adiaspiromycosis","secondary_identifiers":["MEDGEN:537148","DOID:0050072","MESH:C000656784","SCTID:23892008","UMLS:C0259737","ICD9:117.9"],"synonyms":[{"name":"adiaspiromycosis","type":"exact"},{"name":"adiaspirosis","type":"exact"},{"name":"haplosporangiosis","type":"exact"},{"name":"pulmonary adiaspiromycosis","type":"exact"}],"termid":"MONDO:0000239","xrefs":{"Monarch":{"xref_id":"0000239"}}}


id: PBO:0066570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid like 3","termid":"PBO:0066570"}


id: GO:0033975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-haloacid + H2O = (S)-2-hydroxyacid + halide.","definition_xrefs":["EC:3.8.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"(R)-2-haloacid dehalogenase activity","secondary_identifiers":["MetaCyc:RXN-6264","RHEA:22188"],"synonyms":[{"name":"(R)-2-haloacid halidohydrolase activity","type":"related"},{"name":"2-haloalkanoic acid dehalogenase activity","type":"broad"},{"name":"2-haloalkanoid acid halidohydrolase activity","type":"broad"},{"name":"D-2-haloacid dehalogenase activity","type":"related"},{"name":"D-DEX","type":"related"}],"termid":"GO:0033975"}


id: GO:0033094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: putrescine + 2-oxoglutarate = L-glutamate + 1-pyrroline + H2O. The enzymatic part of the reaction produces 4-aminobutanal that spontaneously cyclizes to form 1-pyrroline.","definition_xrefs":["EC:2.6.1.82","GOC:mlg","RHEA:12268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"putrescine--2-oxoglutarate transaminase activity","secondary_identifiers":["MetaCyc:PUTTRANSAM-RXN"],"synonyms":[{"name":"PAT activity","type":"related"},{"name":"YgjG","type":"related"},{"name":"butane-1,4-diamine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"putrescine aminotransferase activity","type":"broad"},{"name":"putrescine transaminase activity","type":"broad"},{"name":"putrescine-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"putrescine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"putrescine:alpha-ketoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0033094"}


id: GO:0098889
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic membrane (obsolete GO:0098889)","synonyms":[{"name":"intrinsic to presynaptic membrane","type":"narrow"}],"termid":"GO:0098889"}


id: MONDO:0003099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endophthalmitis (obsolete MONDO:0003099)","termid":"MONDO:0003099","xrefs":{"Monarch":{"xref_id":"0003099"}}}


id: PBO:0046457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS15 antisense RNA 1","termid":"PBO:0046457"}


id: GO:0043942
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042174"},{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"negatively_regulates","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043942","terms_by_termid":{"GO:0075297":null}}


id: PBO:0038993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthase 2","termid":"PBO:0038993"}


id: GO:0120331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an endothelial tube.","definition_xrefs":["GOC:sl","PMID:23239824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial tube formation","termid":"GO:0120331"}


id: PBO:0066144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB binding protein 4, chromatin remodeling factor","termid":"PBO:0066144"}


id: PBO:0089019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup132","termid":"PBO:0089019"}


id: PBO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein Rad25","termid":"PBO:0002121"}


id: GO:0072108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the transition where a mesenchymal cell establishes apical/basolateral polarity, forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003339"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0072108"}


id: PBO:0087965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of the ATP-binding cassette (ABC) family; role in plasma membrane sterol incorporation; implicated in pleiotropic drug resistance; provides resistance to ethanol stress and contributes to a decreased intracellular accumulation of ethanol; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0087965"}


id: PBO:0003893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase complex subunit (predicted)","termid":"PBO:0003893"}


id: MONDO:0007826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incisors, shovel-shaped","secondary_identifiers":["OMIM:147400","MEDGEN:278058","UMLS:C1409763"],"synonyms":[{"name":"Sinodonty","type":"related"},{"name":"incisors, shovel-shaped","type":"exact"}],"termid":"MONDO:0007826","xrefs":{"Monarch":{"xref_id":"0007826"}}}


id: PBO:0039443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and KH domain containing 1","termid":"PBO:0039443"}


id: MONDO:0005851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune process characterized by the clinical triad of ophthalmoplegia, ataxia, and areflexia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cerebellar disorder","termid":"MONDO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Miller Fisher syndrome","secondary_identifiers":["MESH:D019846","Orphanet:98919","SCTID:1767005","MedDRA:10049567","EFO:0007371","NCIT:C116958","UMLS:C0393799","GARD:3668","icd11.foundation:134795253","DOID:12889","MEDGEN:95994"],"synonyms":[{"name":"Fisher syndrome","type":"exact"},{"name":"Fisher's syndrome","type":"exact"},{"name":"Guillain Barre syndrome, Miller Fisher variant","type":"exact"},{"name":"Guillain-Barre syndrome, Miller Fisher variant","type":"exact"},{"name":"Miller Fisher variant of Guillain Barre syndrome","type":"exact"},{"name":"Miller-Fisher syndrome","type":"exact"},{"name":"Miller-Fisher variant of Guillain-Barre syndrome","type":"exact"},{"name":"cranial variant of GBS","type":"exact"},{"name":"cranial variant of Guillain-Barre syndrome","type":"exact"},{"name":"cranial variant of Guillain-Barré syndrome","type":"exact"},{"name":"ophthalmoplegia, ataxia and areflexia syndrome","type":"exact"},{"name":"syndrome, Fisher","type":"exact"},{"name":"syndrome, Miller Fisher","type":"exact"},{"name":"syndrome, Miller-Fisher","type":"exact"}],"termid":"MONDO:0005851","xrefs":{"Monarch":{"xref_id":"0005851"}}}


id: PBO:0089601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR2-SEACAT complex WD repeat subunit Seh1","termid":"PBO:0089601"}


id: GO:0008892
data:
  {"annotated_genes":["SJAG_01997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114474],"is_not":false,"summary":null,"term":"GO:0008892"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanine + H2O = xanthine + NH3.","definition_xrefs":["EC:3.5.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"guanine deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GUANINE-DEAMINASE-RXN","Reactome:R-HSA-74255","RHEA:14665"],"synonyms":[{"name":"GAH activity","type":"related"},{"name":"guanase activity","type":"related"},{"name":"guanine aminase activity","type":"related"},{"name":"guanine aminohydrolase activity","type":"related"}],"termid":"GO:0008892","terms_by_termid":{"GO:0008892":null}}


id: PBO:0043809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 1","termid":"PBO:0043809"}


id: GO:0008946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of oligonucleotides to yield nucleoside 5'-phosphates.","definition_xrefs":["EC:3.1.13.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"oligonucleotidase activity","secondary_identifiers":["MetaCyc:3.1.13.3-RXN"],"termid":"GO:0008946"}


id: PBO:0065053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 7","termid":"PBO:0065053"}


id: PBO:0003963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase phi","termid":"PBO:0003963"}


id: GO:0090072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the directed movement of sodium ions via the activity of voltage-gated sodium channels.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sodium ion transport via voltage-gated sodium channel activity (obsolete GO:0090072)","synonyms":[{"name":"positive regulation of sodium ion transport via voltage-gated sodium channel activity","type":"exact"}],"termid":"GO:0090072"}


id: GO:2000481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cAMP-dependent protein kinase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"},{"relation_name":"is_a","term_name":"regulation of cAMP-dependent protein kinase activity","termid":"GO:2000479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cAMP-dependent protein kinase activity","synonyms":[{"name":"positive regulation of 3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of 3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of AMPK","type":"related"},{"name":"positive regulation of ATP:protein phosphotransferase (cAMP-dependent) activity","type":"exact"},{"name":"positive regulation of PKA","type":"related"},{"name":"positive regulation of PKA C","type":"related"},{"name":"positive regulation of STK22","type":"related"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"positive regulation of cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of protein kinase A activity","type":"related"}],"termid":"GO:2000481"}


id: PBO:0091934
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P cleavage specificity not affected by sequences flanking the G+1 cleavage site","termid":"PBO:0091934"}


id: MONDO:0019202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant fibroblastic neoplasm arising from the soft tissue. It is characterized by the presence of spindle-shaped cells, cellular pleomorphism, thin-walled blood vessels, fibrous septa, and myxoid stroma.","definition_xrefs":["NCIT:C6496"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular tumor (obsolete MONDO:0016123)","termid":"MONDO:0016123"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxofibrosarcoma","secondary_identifiers":["DOID:0080534","GARD:18941","icd11.foundation:405689402","ICDO:8811/3","MedDRA:10066948","UMLS:C3714524","MEDGEN:811359","Orphanet:79105","ONCOTREE:MFS","SCTID:253042009"],"synonyms":[{"name":"MFS","type":"related"},{"name":"fibromyxosarcoma","type":"exact"},{"name":"myxofibrosarcoma","type":"exact"},{"name":"myxoid MFH","type":"exact"},{"name":"myxoid fibrous histiocytoma","type":"exact"},{"name":"myxoid malignant fibrous histiocytoma","type":"exact"}],"termid":"MONDO:0019202","xrefs":{"Monarch":{"xref_id":"0019202"}}}


id: PBO:0077493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM212 intronic transcript 1","termid":"PBO:0077493"}


id: PBO:0051098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin mu DNA binding protein 2","termid":"PBO:0051098"}


id: GO:0043399
data:
  {"annotated_genes":["SJAG_05228"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96531],"is_not":false,"summary":null,"term":"GO:0043399"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphoribosyl group from 5'-phosphoribosyl-1'-pyrophosphate to position 64 of initiator tRNA.","definition_xrefs":["PMID:22030622","PMID:7954819","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0016740","GO:0140098","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tRNA adenosine(64)-2'-O-ribosylphosphate transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"initiator tRNA phosphoribosyl-transferase activity","type":"exact"},{"name":"tRNA A64-2'-O-ribosylphosphate transferase activity","type":"exact"}],"termid":"GO:0043399","terms_by_termid":{"GO:0043399":null}}


id: MONDO:0009573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaepiphyseal dwarfism","secondary_identifiers":["OMIM:249230","UMLS:C1855310","MEDGEN:383654","MESH:C536140"],"synonyms":[{"name":"megaepiphyseal dwarfism","type":"exact"}],"termid":"MONDO:0009573","xrefs":{"Monarch":{"xref_id":"0009573"}}}


id: PBO:0074383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG6 nonsense mediated mRNA decay factor","termid":"PBO:0074383"}


id: MONDO:0017151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension (PAH) associated with connective tissue disease (PAH-CTD) is a form of pulmonary arterial hypertension (PAH) characterized by an elevated pulmonary arterial resistance leading to right heart failure observed as a complication of a connective tissue disease.","definition_xrefs":["Orphanet:275798"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with connective tissue disease (obsolete MONDO:0017151)","secondary_identifiers":["ICD9:416.8","SCTID:697903007"],"synonyms":[{"name":"PAH associated with connective tissue disease","type":"exact"}],"termid":"MONDO:0017151","xrefs":{"Monarch":{"xref_id":"0017151"}}}


id: GO:1901261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sorocarp spore cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sorocarp development","termid":"GO:0031156"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"sorocarp spore cell differentiation","termid":"GO:0044671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sorocarp spore cell differentiation","termid":"GO:1901261"}


id: MONDO:0005612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian leiomyosarcoma (obsolete MONDO:0005612)","termid":"MONDO:0005612","xrefs":{"Monarch":{"xref_id":"0005612"}}}


id: PBO:0059872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 9 like, pseudogene","termid":"PBO:0059872"}


id: GO:0031389
data:
  {"annotated_genes":["SJAG_00272","SJAG_02563","SJAG_00729","SJAG_01010","SJAG_02182"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88630,89086,93464,94769,111719],"is_not":false,"summary":null,"term":"GO:0031389"}]},"cv_name":"cellular_component","definition":"A pentameric protein complex related to replication factor C, which loads a trimeric complex of checkpoint proteins (known as the checkpoint clamp or 9-1-1 complex) onto DNA at damage sites; functions in DNA damage cell cycle checkpoints. In Schizosaccharomyces pombe the subunits are known as Rad17, Rfc2, Rfc3, Rfc4, and Rfc5, while in Saccharomyces cerevisiae the subunits are known as Rad24p, Rfc2p, Rfc3p, Rfc4p, and Rfc5p.","definition_xrefs":["PMID:14614842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Rad17 RFC-like complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RFC (Rad17)","type":"exact"},{"name":"Rad17-RFC","type":"exact"},{"name":"Rad17-RLC","type":"exact"},{"name":"Rad24p RFC-like complex","type":"exact"}],"termid":"GO:0031389","terms_by_termid":{"GO:0031389":null}}


id: GO:0034157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 7 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 7 signaling pathway","termid":"GO:0034155"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 7 signaling pathway","termid":"GO:0034154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 7 signaling pathway","synonyms":[{"name":"positive regulation of TLR7 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034157"}


id: PBO:0059781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 7","termid":"PBO:0059781"}


id: GO:0031527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a filopodium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"filopodium membrane","termid":"GO:0031527"}


id: GO:0008874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = 5-dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["EC:1.1.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate dehydrogenase activity","termid":"GO:0008875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gluconate 5-dehydrogenase activity","secondary_identifiers":["MetaCyc:GLUCONATE-5-DEHYDROGENASE-RXN"],"synonyms":[{"name":"5-keto-D-gluconate 5-reductase activity","type":"related"},{"name":"5-keto-D-gluconate reductase","type":"related"},{"name":"5-ketogluconate 5-reductase activity","type":"related"},{"name":"5-ketogluconate reductase activity","type":"related"},{"name":"D-gluconate:NAD(P)+ 5-oxidoreductase","type":"related"}],"termid":"GO:0008874"}


id: GO:1900079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arginine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"is_a","term_name":"regulation of arginine metabolic process","termid":"GO:0000821"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"L-arginine biosynthetic process","termid":"GO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of arginine biosynthetic process","synonyms":[{"name":"regulation of arginine anabolism","type":"exact"},{"name":"regulation of arginine biosynthesis","type":"exact"},{"name":"regulation of arginine formation","type":"exact"},{"name":"regulation of arginine synthesis","type":"exact"}],"termid":"GO:1900079"}


id: PBO:0053052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 pseudogene 3","termid":"PBO:0053052"}


id: PBO:0052531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 4","termid":"PBO:0052531"}


id: PBO:0054038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1374","termid":"PBO:0054038"}


id: PBO:0067913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 215","termid":"PBO:0067913"}


id: MONDO:0010841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2B","secondary_identifiers":["OMIM:600193","MEDGEN:373973","MESH:C536465","DOID:0110947","UMLS:C1838447","GARD:5522"],"synonyms":[{"name":"WS2B","type":"exact"},{"name":"Waardenburg syndrome type IIB","type":"exact"},{"name":"Waardenburg syndrome, type 2B","type":"related"}],"termid":"MONDO:0010841","xrefs":{"Monarch":{"xref_id":"0010841"}}}


id: FYPO:0003005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that has a larger diameter and volume than normal and forms branches, and does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with branched, elongated germ tube","termid":"FYPO:0002515"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with swollen elongated germ tube","termid":"FYPO:0002911"},{"relation_name":"is_a","term_name":"inviable branched, swollen, elongated vegetative cell","termid":"FYPO:0004494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with swollen, branched, elongated germ tube","synonyms":[{"name":"inviable after spore germination with elongated swollen branched germ tube","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen, branched, elongated cell","type":"exact"},{"name":"inviable following spore germination with swollen, branched, elongated germ tube","type":"exact"},{"name":"inviable germinated spore with swollen, branched, elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with swollen, branched, elongated germ tube","type":"exact"}],"termid":"FYPO:0003005"}


id: GO:0052544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response by cell wall thickening","termid":"GO:0052482"},{"relation_name":"is_a","term_name":"defense response by callose deposition","termid":"GO:0052542"},{"relation_name":"is_a","term_name":"callose deposition in cell wall","termid":"GO:0052543"},{"relation_name":"part_of","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"defense response by callose deposition in cell wall","synonyms":[{"name":"callose deposition in cell wall during defense response","type":"related"},{"name":"callose localization in cell wall during defense response","type":"exact"},{"name":"cell wall callose deposition during defense response","type":"exact"},{"name":"cell wall callose localization during defense response","type":"exact"}],"termid":"GO:0052544"}


id: PBO:0077581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMLHE pseudogene 1","termid":"PBO:0077581"}


id: PBO:0090496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus4","termid":"PBO:0090496"}


id: PBO:0083332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF YER152C","termid":"PBO:0083332"}


id: GO:0033979
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving box H/ACA type small nucleolar RNA.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016074","GO:0008150"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box H/ACA sRNA metabolic process","type":"narrow"},{"name":"box H/ACA snoRNA metabolic process","type":"narrow"}],"termid":"GO:0033979","terms_by_termid":{"GO:0000495":null}}


id: GO:0140889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of nucleosomes during DNA replication to allow the replication machinery to access the DNA.","definition_xrefs":["PMID:34471130","PMID:35308047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"DNA replication-dependent chromatin disassembly","termid":"GO:0140889"}


id: GO:0051461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of corticotropin hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of corticotropin secretion","termid":"GO:0051459"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"corticotropin secretion","termid":"GO:0051458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of corticotropin secretion","synonyms":[{"name":"activation of adrenocorticotropin secretion","type":"narrow"},{"name":"positive regulation of ACTH secretion","type":"exact"},{"name":"positive regulation of adrenocorticotropic hormone secretion","type":"exact"},{"name":"positive regulation of adrenocorticotropin secretion","type":"exact"},{"name":"positive regulation of adrenotropic hormone secretion","type":"exact"},{"name":"positive regulation of adrenotropin secretion","type":"exact"},{"name":"positive regulation of corticotropic hormone secretion","type":"exact"},{"name":"stimulation of adrenocorticotropin secretion","type":"narrow"},{"name":"up regulation of adrenocorticotropin secretion","type":"exact"},{"name":"up-regulation of adrenocorticotropin secretion","type":"exact"},{"name":"upregulation of adrenocorticotropin secretion","type":"exact"}],"termid":"GO:0051461"}


id: GO:0018091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-asparagine.","definition_xrefs":["RESID:AA0196"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine racemization (obsolete GO:0018091)","termid":"GO:0018091"}


id: PBO:0078911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 2-1","termid":"PBO:0078911"}


id: GO:0021806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial stages of cell motility involved in the glial-mediated movement of cells in the developing cerebral cortex.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GOC:jid","PMID:12626695","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"cell motility involved in cerebral cortex radial glia guided migration","termid":"GO:0021814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of movement involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"initiation of movement involved in cerebral cortex glial-mediated radial migration","type":"related"}],"termid":"GO:0021806"}


id: FYPO:0000405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G2/M transition of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cell cycle phase transition","termid":"FYPO:0006916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic G2/M phase transition","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: normal","type":"related"},{"name":"normal G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"normal cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"normal mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000405"}


id: GO:0003430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a growth plate cartilage chondrocyte, where growth contributes to the progression of the chondrocyte over time from one condition to another.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte hypertrophy","termid":"GO:0003415"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte development","termid":"GO:0003431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte growth","synonyms":[{"name":"growth plate cartilage chondrocyte hypertrophy","type":"exact"}],"termid":"GO:0003430"}


id: PBO:0088109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar alpha mannosidase; involved in free oligosaccharide (fOS) degradation; upregulated under glucose starvation; delivered to the vacuole in a novel pathway separate from the secretory pathway","termid":"PBO:0088109"}


id: MONDO:0016646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant optic atrophy and peripheral neuropathy (ADOAPN) is a form of autosomal dominant optic atrophy (ADOA), characterized by progressive and isolated visual loss in the first decade of life, decreased reflexes in the lower limbs and a mild cerebellar stance.","definition_xrefs":["Orphanet:250932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy","termid":"MONDO:0020250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0004069","MONDO:0005559","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"autosomal dominant optic atrophy and peripheral neuropathy","secondary_identifiers":["GARD:20686","MEDGEN:895207","UMLS:C4273829"],"termid":"MONDO:0016646","xrefs":{"Monarch":{"xref_id":"0016646"}}}


