# terms

id: PBO:0017865
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli fbp","termid":"PBO:0017865"}


id: GO:0044111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an organism from an initial condition to a later condition, occurring when the organism is in a symbiotic interaction.","definition_xrefs":["GO:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interspecies interaction between organisms","termid":"GO:0044419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of structure involved in a symbiotic process","secondary_identifiers":["GO:0044152","GO:0044115"],"synonyms":[{"name":"development during symbiotic interaction","type":"related"},{"name":"development involved in symbiotic interaction","type":"related"},{"name":"development of symbiont during interaction with host","type":"related"},{"name":"development of symbiont involved in interaction with host","type":"related"},{"name":"development on or near surface of other organism during symbiotic interaction","type":"related"},{"name":"development on or near surface of other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0044111"}


id: PR:O74913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.02c gene.","definition_xrefs":["UniProtKB:O74913","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C757.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.02c","synonyms":[{"name":"Spom972h-SPCC757.02c","type":"exact"}],"termid":"PR:O74913"}


id: PBO:0055007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2422","termid":"PBO:0055007"}


id: PBO:0065793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 2","termid":"PBO:0065793"}


id: PBO:0035831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_during_vegetative_growth","termid":"PBO:0035831"}


id: PBO:0068830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 68, pseudogene","termid":"PBO:0068830"}


id: PBO:0058881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10397","termid":"PBO:0058881"}


id: PBO:0044022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 alpha 1","termid":"PBO:0044022"}


id: GO:0004827
data:
  {"annotated_genes":["SJAG_01259","SJAG_02236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105395,106584],"is_not":false,"summary":null,"term":"GO:0004827"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro).","definition_xrefs":["EC:6.1.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01259":null,"SJAG_02236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0016874","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"proline-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380198","Reactome:R-HSA-379865","RHEA:14305","MetaCyc:PROLINE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"L-proline:tRNAPro ligase (AMP-forming)","type":"related"},{"name":"proline translase activity","type":"related"},{"name":"prolinyl-tRNA ligase activity","type":"related"},{"name":"prolyl-s-RNA synthetase activity","type":"related"},{"name":"prolyl-tRNA synthetase activity","type":"exact"},{"name":"prolyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"prolyl-transfer ribonucleic acid synthetase activity","type":"related"},{"name":"prolyl-transferRNA synthetase activity","type":"related"}],"termid":"GO:0004827","terms_by_termid":{"GO:0004827":null}}


id: PBO:0082776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SSU processome; SSU processome is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA","termid":"PBO:0082776"}


id: GO:0099617
data:
  {"annotated_genes":["SJAG_MIT15","SJAG_00133","SJAG_04122","SJAG_03114","SJAG_03925","SJAG_01249","SJAG_00852","SJAG_02598","SJAG_02564","SJAG_00542","SJAG_00985","SJAG_00077","SJAG_MIT09","SJAG_07003","SJAG_00797","SJAG_03282","SJAG_00438","SJAG_01806","SJAG_MIT37","SJAG_02105","SJAG_00836","SJAG_05204","SJAG_00915"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88640,89003,89466,92355,92781,93315,93367,94345,95752,101306,102517,103135,103164,104473,107272,107364,108244,115287,118491,118497,118502],"is_not":false,"summary":null,"term":"GO:0099617"},{"annotations":[103248,99946],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"}]},"cv_name":"cellular_component","definition":"The side (leaflet) of the mitochondrial inner membrane that faces the matrix.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00797":null,"SJAG_00836":null,"SJAG_00852":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01249":null,"SJAG_01806":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03282":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"matrix side of mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099617","terms_by_termid":{"GO:0099616":null,"GO:0099617":null}}


id: PBO:0017696
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptide Trna Hydrolase","termid":"PBO:0017696"}


id: GO:0044284
data:
  {"annotated_genes":["SJAG_02501","SJAG_02002","SJAG_03282","SJAG_02028","SJAG_05241"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89004,101192,106784,109478,114081],"is_not":false,"summary":null,"term":"GO:0044284"}]},"cv_name":"cellular_component","definition":"A tubular structure of relatively uniform size that connects a mitochondrial crista to the mitochondrial inner boundary membrane.","definition_xrefs":["PMID:21987634","GOC:mcc","PMID:21944719","PMID:22009199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02002":null,"SJAG_02028":null,"SJAG_02501":null,"SJAG_03282":null,"SJAG_05241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial crista junction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"crista junction","type":"exact"},{"name":"cristae junction","type":"exact"}],"termid":"GO:0044284","terms_by_termid":{"GO:0044284":null}}


id: GO:0004620
data:
  {"annotated_genes":["SJAG_04323","SJAG_02161","SJAG_03204","SJAG_01219","SJAG_01519","SJAG_04110","SJAG_02093","SJAG_00199","SJAG_02091","SJAG_04292","SJAG_02100","SJAG_00321","SJAG_01198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92076,113289],"is_not":false,"summary":null,"term":"GO:0004620"},{"annotations":[108278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052712"},{"annotations":[100307,116421,89633,102463,91398,114203,91390,93426,113505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[108279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[97268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[92888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[99249,91391,89634,100308,114204,91399,102464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[95437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[108280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a glycerophospholipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_00321":null,"SJAG_01198":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_03204":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6786650","Reactome:R-HSA-6792445"],"termid":"GO:0004620","terms_by_termid":{"GO:0004435":null,"GO:0004620":null,"GO:0004622":null,"GO:0004623":null,"GO:0004630":null,"GO:0004767":null,"GO:0034479":null,"GO:0052712":null,"GO:0052714":null}}


id: GO:0106272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the endoplasmic reticulum-Golgi intermediate compartment (ERGIC).","definition_xrefs":["PMID:32272059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to ERGIC","termid":"GO:0106272"}


id: PBO:0060324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IC","termid":"PBO:0060324"}


id: PBO:0062793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orosomucoid 1","termid":"PBO:0062793"}


id: GO:0060284
data:
  {"annotated_genes":["SJAG_03581","SJAG_00993","SJAG_02392","SJAG_00514","SJAG_04140","SJAG_04853","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95351,89375,94083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[110651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[90240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[101779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[91697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cell development","termid":"GO:0048468"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_00993":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060284","terms_by_termid":{"GO:0034307":null,"GO:0051517":null,"GO:0051519":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:0052522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of phagocytosis in other organism involved in symbiotic interaction (obsolete GO:0052522)","synonyms":[{"name":"activation by organism of phagocytosis in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"stimulation by organism of phagocytosis in other organism during symbiotic interaction","type":"narrow"},{"name":"up regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"up-regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"upregulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052522"}


id: MONDO:0012796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PROM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PROM1-related recessive retinopathy","termid":"MONDO:1040052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 41","secondary_identifiers":["MESH:C567422","ICD10CM:H35.5","UMLS:C2677516","GARD:10379","DOID:0110376","MEDGEN:383126","OMIM:612095"],"synonyms":[{"name":"PROM1 retinitis pigmentosa","type":"exact"},{"name":"RP 41","type":"related"},{"name":"RP41","type":"exact"},{"name":"retinal Degeneration, autosomal recessive, prominin-related","type":"related"},{"name":"retinitis pigmentosa 41","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PROM1","type":"exact"},{"name":"retinitis pigmentosa type 41","type":"exact"}],"termid":"MONDO:0012796","xrefs":{"Monarch":{"xref_id":"0012796"}}}


id: GO:0019981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-6.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-6 binding","synonyms":[{"name":"IL-6 binding","type":"exact"}],"termid":"GO:0019981"}


id: PR:Q9P6J5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1683.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6J5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized permease C1683.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.05","synonyms":[{"name":"Spom972h-SPBC1683.05","type":"exact"}],"termid":"PR:Q9P6J5"}


id: PBO:0089900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-pseudouridine synthase Deg1","termid":"PBO:0089900"}


id: PBO:0039952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C","termid":"PBO:0039952"}


id: PBO:0040896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 2","termid":"PBO:0040896"}


id: PBO:0038670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 4","termid":"PBO:0038670"}


id: GO:2000455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 17 cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000449"},{"relation_name":"regulates","term_name":"T-helper 17 cell extravasation","termid":"GO:0035699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 17 cell extravasation","termid":"GO:2000455"}


id: GO:0090047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.","definition_xrefs":["GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription regulator activity (obsolete GO:0090047)","synonyms":[{"name":"positive regulation of transcription regulator activity","type":"exact"}],"termid":"GO:0090047"}


id: PR:O14195
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56E4.07 gene.","definition_xrefs":["UniProtKB:O14195","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C56E4.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.07","synonyms":[{"name":"Spom972h-SPAC56E4.07","type":"exact"}],"termid":"PR:O14195"}


id: GO:0035833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of berbamunine, an isoquinoline alkaloid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzyl isoquinoline alkaloid biosynthetic process","termid":"GO:0009708"},{"relation_name":"is_a","term_name":"berbamunine metabolic process","termid":"GO:0035832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"berbamunine biosynthetic process","synonyms":[{"name":"berbamunine anabolism","type":"exact"},{"name":"berbamunine biosynthesis","type":"exact"},{"name":"berbamunine formation","type":"exact"},{"name":"berbamunine synthesis","type":"exact"}],"termid":"GO:0035833"}


id: PBO:0108552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 associated factor 1 Laf1","termid":"PBO:0108552"}


id: PR:Q9Y7I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.20 gene.","definition_xrefs":["UniProtKB:Q9Y7I1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1B3.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.20","synonyms":[{"name":"Spom972h-SPAC1B3.20","type":"exact"}],"termid":"PR:Q9Y7I1"}


id: GO:0047234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 raffinose = sucrose + 1F-alpha-D-galactosylraffinose.","definition_xrefs":["EC:2.4.1.166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"raffinose-raffinose alpha-galactotransferase activity","secondary_identifiers":["RHEA:14125","MetaCyc:RXN-11490"],"synonyms":[{"name":"raffinose (raffinose donor) galactosyltransferase activity","type":"related"},{"name":"raffinose-raffinose a-galactosyltransferase activity","type":"exact"},{"name":"raffinose-raffinose alpha-galactosyltransferase activity","type":"exact"},{"name":"raffinose:raffinose alpha-D-galactosyltransferase activity","type":"related"},{"name":"raffinose:raffinose alpha-galactosyltransferase activity","type":"related"}],"termid":"GO:0047234"}


id: PBO:0008152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein Csm1/Pcs1","termid":"PBO:0008152"}


id: FYPO:0001049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype in which a cell undergoes mitotic catastrophe (i.e. enters mitosis prematurely and with defective chromosome segregation), entering mitosis when smaller than wild type.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe, small cell (obsolete FYPO:0001049)","synonyms":[{"name":"mitotic catastrophe, small cell during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe, small cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001049"}


id: PBO:0068076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 382","termid":"PBO:0068076"}


id: GO:1903883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:krc","GO_REF:0000058","PMID:20054338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-17-mediated signaling pathway","termid":"GO:1903881"},{"relation_name":"positively_regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"activation of IL-17-mediated signaling pathway","type":"narrow"},{"name":"activation of IL-17-mediated signalling pathway","type":"narrow"},{"name":"activation of interleukin-17-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-17-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"positive regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"positive regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"up regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"up regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"up-regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"up-regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"upregulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"upregulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903883"}


id: GO:0019933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic AMP (cAMP), and ends with activation of downstream effectors that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cAMP-mediated signaling","synonyms":[{"name":"3',5' cAMP-mediated signaling","type":"exact"},{"name":"3',5' cAMP-mediated signalling","type":"exact"},{"name":"3',5'-cAMP-mediated signaling","type":"exact"},{"name":"3',5'-cAMP-mediated signalling","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-mediated signaling","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-mediated signalling","type":"exact"},{"name":"cAMP signaling","type":"exact"},{"name":"cAMP signalling","type":"exact"},{"name":"cAMP-mediated signal transduction","type":"exact"},{"name":"cAMP-mediated signalling","type":"exact"},{"name":"cyclic AMP-mediated signaling","type":"exact"},{"name":"cyclic AMP-mediated signalling","type":"exact"}],"termid":"GO:0019933"}


id: PBO:0063541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine binding protein 1","termid":"PBO:0063541"}


id: PBO:0040657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 1","termid":"PBO:0040657"}


id: PBO:0030256
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_acetylation","termid":"PBO:0030256"}


id: FYPO:0001719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to lithium ions. Cells stop growing (and may die) at a concentration of lithium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to lithium","synonyms":[{"name":"hypersensitive to lithium","type":"exact"},{"name":"sensitive to lithium during mitotic cell cycle","type":"related"},{"name":"sensitive to lithium during vegetative growth","type":"exact"},{"name":"sensitive to lithium ions","type":"exact"}],"termid":"FYPO:0001719"}


id: PBO:0061323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B1, pseudogene","termid":"PBO:0061323"}


id: GO:0034032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a purine nucleoside bisphosphate, a compound consisting of a purine base linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside bisphosphate metabolic process","synonyms":[{"name":"purine nucleoside bisphosphate metabolism","type":"exact"}],"termid":"GO:0034032"}


id: MONDO:0800343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rhegmatogenous retinal detachment, autosomal dominant (obsolete MONDO:0800343)","termid":"MONDO:0800343","xrefs":{"Monarch":{"xref_id":"0800343"}}}


id: GO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splicing of Group II introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group II introns and containing splice site consensus sequences, that is involved in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions (mechanistically similar to those for splicing of nuclear mRNAs) initiated by a bulged adenosine residue within the intron sequence as the initiating nucleophile. The intron is excised as a lariat.","definition_xrefs":["GOC:krc","PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","termid":"GO:0000377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"Group II intron splicing","synonyms":[{"name":"mRNA splicing","type":"related"}],"termid":"GO:0000373"}


id: GO:1902842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:24004945","GOC:kmv","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of netrin-activated signaling pathway","termid":"GO:1902841"},{"relation_name":"negatively_regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of netrin-activated signaling pathway","synonyms":[{"name":"down regulation of netrin signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"down-regulation of netrin signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down-regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down-regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"downregulation of netrin signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"downregulation of netrin-activated signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signalling pathway","type":"exact"},{"name":"downregulation of netrin-mediated signaling pathway","type":"exact"},{"name":"inhibition of netrin signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signal transduction pathway","type":"narrow"},{"name":"inhibition of netrin-activated signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signalling pathway","type":"narrow"},{"name":"inhibition of netrin-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of netrin signaling pathway","type":"exact"},{"name":"negative regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"negative regulation of netrin-activated signalling pathway","type":"exact"},{"name":"negative regulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902842"}


id: PBO:0088687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergothioneine biosynthesis protein Egt1","termid":"PBO:0088687"}


id: PBO:0085280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane E3 ubiquitin ligase; required for for Ubc4p-dependent Pex5p ubiquitination and peroxisomal matrix protein import; contains zinc-binding RING domain; mutations in human homolog cause various peroxisomal disorders","termid":"PBO:0085280"}


id: PBO:0029689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_iron_ion_starvation-induced_proteins","termid":"PBO:0029689"}


id: PBO:0072591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis regulator 1 homolog","termid":"PBO:0072591"}


id: MONDO:0019294
data:
  {"annotated_genes":["SJAG_03199","SJAG_03846","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007145"},{"annotations":[85487,85488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024552"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_03846":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"mixed dermis disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79380","UMLS:C5681484","MEDGEN:1842502"],"termid":"MONDO:0019294","terms_by_termid":{"MONDO:0007145":null,"MONDO:0024552":null},"xrefs":{"Monarch":{"xref_id":"0019294"}}}


id: PBO:0026980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_membrane","termid":"PBO:0026980"}


id: GO:0043537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the migration of the endothelial cells of blood vessels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell migration","termid":"GO:0010596"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell migration","termid":"GO:0043535"},{"relation_name":"negatively_regulates","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel endothelial cell migration","synonyms":[{"name":"down regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"down-regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"downregulation of blood vessel endothelial cell migration","type":"exact"},{"name":"inhibition of blood vessel endothelial cell migration","type":"narrow"}],"termid":"GO:0043537"}


id: MONDO:0006090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic polyp that arises from the appendix. It is characterized by the presence of elongated serrated crypts and the absence of atypia or dysplasia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplastic polyp","termid":"MONDO:0006249"},{"relation_name":"is_a","term_name":"polyp of large intestine","termid":"MONDO:0021392"},{"relation_name":"is_a","term_name":"disorder of appendix","termid":"MONDO:0056798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"appendix hyperplastic polyp","secondary_identifiers":["UMLS:C3272761","MEDGEN:474394","NCIT:C96416"],"synonyms":[{"name":"appendix metaplastic polyp","type":"exact"},{"name":"vermiform appendix hyperplastic polyp","type":"exact"}],"termid":"MONDO:0006090","xrefs":{"Monarch":{"xref_id":"0006090"}}}


id: GO:0042600
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protective, noncellular membrane that surrounds the eggs of various animals including insects and fish.","definition_xrefs":["ISBN:0721662544","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"egg chorion","termid":"GO:0042600"}


id: PBO:0057515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 633","termid":"PBO:0057515"}


id: GO:0034780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glyphosate + OH- = glyoxylate + aminomethylphosphonic acid + H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glyphosate dehydrogenase activity (obsolete GO:0034780)","termid":"GO:0034780"}


id: PBO:0066420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REPIN1 antisense RNA 1","termid":"PBO:0066420"}


id: PBO:0084924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monomeric glyoxalase I; catalyzes the detoxification of methylglyoxal (a by-product of glycolysis) via condensation with glutathione to produce S-D-lactoylglutathione; required for full activity of O-acetyl homoserine sulfhydrylase, Met17p; expression regulated by methylglyoxal levels and osmotic stress","termid":"PBO:0084924"}


id: PBO:0042334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD63 molecule","termid":"PBO:0042334"}


id: GO:2000065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cortisol biosynthetic process.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid biosynthetic process","termid":"GO:0031947"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"is_a","term_name":"regulation of cortisol biosynthetic process","termid":"GO:2000064"},{"relation_name":"negatively_regulates","term_name":"cortisol biosynthetic process","termid":"GO:0034651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"negative regulation of cortisol biosynthetic process","synonyms":[{"name":"negative regulation of cortisol anabolism","type":"related"},{"name":"negative regulation of cortisol biosynthesis","type":"exact"},{"name":"negative regulation of cortisol formation","type":"exact"},{"name":"negative regulation of cortisol synthesis","type":"exact"}],"termid":"GO:2000065"}


id: PBO:0034497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_topoisomerase-DNA_adduct_level","termid":"PBO:0034497"}


id: PBO:0018059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0018059"}


id: MONDO:0034931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare conjunctivitis (obsolete MONDO:0034931)","secondary_identifiers":["Orphanet:519280"],"termid":"MONDO:0034931","xrefs":{"Monarch":{"xref_id":"0034931"}}}


id: MONDO:0060722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurodevelopmental disorder with brain, liver, and lung abnormalities (obsolete MONDO:0060722)","termid":"MONDO:0060722","xrefs":{"Monarch":{"xref_id":"0060722"}}}


id: GO:0046760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral budding that starts with formation of a membrane curvature in the host Golgi membrane.","definition_xrefs":["VZ:1947","ISBN:0072370319","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from Golgi membrane","secondary_identifiers":["GO:0046750","GO:0046763"],"synonyms":[{"name":"Golgi membrane viral budding","type":"exact"},{"name":"Golgi membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from Golgi membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from Golgi membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from Golgi membrane","type":"exact"},{"name":"virus budding from Golgi membrane by viral capsid envelopment","type":"related"},{"name":"virus budding from Golgi membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046760"}


id: GO:0140135
data:
  {"annotated_genes":["SJAG_02877","SJAG_04668","SJAG_05229","SJAG_02532","SJAG_05342"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103254],"is_not":false,"summary":null,"term":"GO:0140135"},{"annotations":[99130,91915,91858,113367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens in response to a mechanical stress.","definition_xrefs":["GOC:ha","PMID:22343900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"mechanosensitive monoatomic ion channel activity","termid":"GO:0008381"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02532":null,"SJAG_02877":null,"SJAG_04668":null,"SJAG_05229":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"mechanosensitive monoatomic cation channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9663363","Reactome:R-HSA-9855089","Reactome:R-HSA-9659380"],"synonyms":[{"name":"mechanically-gated cation channel activity","type":"exact"},{"name":"mechanosensitive cation channel activity","type":"broad"}],"termid":"GO:0140135","terms_by_termid":{"GO:0015275":null,"GO:0140135":null}}


id: PBO:0114139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase family 3, Ghf3","termid":"PBO:0114139"}


id: GO:0004661
data:
  {"annotated_genes":["SJAG_04923","SJAG_03810","SJAG_04434","SJAG_03029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100892],"is_not":false,"summary":null,"term":"GO:0004661"},{"annotations":[100889,95223,95222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004662"},{"annotations":[114397,89042,100893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004663"}]},"cv_name":"molecular_function","definition":"Catalysis of the covalent addition of a geranylgeranyl (20-carbon isoprenoid) group via thioether linkages to a cysteine residue at or near the C terminus of a protein.","definition_xrefs":["PMID:8621375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03029":null,"SJAG_03810":null,"SJAG_04434":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140096","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"protein geranylgeranyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0018224","RHEA:21240"],"synonyms":[{"name":"protein-cysteine geranylgeranyltransferase activity","type":"exact"}],"termid":"GO:0004661","terms_by_termid":{"GO:0004661":null,"GO:0004662":null,"GO:0004663":null}}


id: PR:O43047
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GrpE protein homolog 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03957","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GrpE protein homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.19","secondary_identifiers":["UniProtKB:O43047"],"synonyms":[{"name":"Spom972h-GRPEL1","type":"exact"}],"termid":"PR:O43047"}


id: PBO:0013114
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisie STM1","termid":"PBO:0013114"}


id: PBO:0066469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C 5 pseudogene 1","termid":"PBO:0066469"}


id: PBO:0089999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase","termid":"PBO:0089999"}


id: SO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000244 four_cutter_restriction_site (obsolete SO:0000244)","synonyms":[{"name":"4-cutter_restriction_site","type":"related"},{"name":"four-cutter_restriction_sit","type":"related"}],"termid":"SO:0000244"}


id: PBO:0048006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 6","termid":"PBO:0048006"}


id: GO:0102801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4'''-demalonylsalvianin + malonyl-CoA = salvianin + coenzyme A.","definition_xrefs":["GOC:pz","RHEA:35515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"anthocyanin 5-O-glucoside-4'''-O-malonyltransferase activity","secondary_identifiers":["EC:2.3.1.214","MetaCyc:RXN-8139"],"termid":"GO:0102801"}


id: GO:1904845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-glutamine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23185570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to L-glutamine","termid":"GO:1904844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-glutamine","termid":"GO:1904845"}


id: PBO:0046304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENAH actin regulator","termid":"PBO:0046304"}


id: GO:0098942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by trans-synaptic protein complex.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling","termid":"GO:0098917"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by trans-synaptic protein complex","termid":"GO:0098942"}


id: PBO:0111742
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLEYA domain","termid":"PBO:0111742"}


id: GO:0018712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-5-oxohexanoyl-CoA + CoASH = 3-hydroxybutyryl-CoA + acetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA thiolase activity","secondary_identifiers":["MetaCyc:R7-RXN"],"termid":"GO:0018712"}


id: PBO:0048905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA7B divergent transcript","termid":"PBO:0048905"}


id: GO:0046872
data:
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id: PBO:0071148
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id: PBO:0054346
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id: PBO:0062055
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id: FYPO:0005410
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id: GO:0010332
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id: PBO:0056264
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id: PBO:0045139
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id: PBO:0040643
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id: GO:0050427
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id: PBO:0031364
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id: PBO:0060245
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id: GO:0035044
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id: PBO:0049982
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id: MONDO:0020405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cleft mitral valve","termid":"MONDO:0019818"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"straddling and/or overriding mitral valve","secondary_identifiers":["GARD:19631","UMLS:C5681625","Orphanet:99064","MEDGEN:1842816"],"termid":"MONDO:0020405","xrefs":{"Monarch":{"xref_id":"0020405"}}}


id: GO:0007150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process whereby cells develop a specific morphology under a specific set of circumstances.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete growth pattern (obsolete GO:0007150)","synonyms":[{"name":"growth pattern","type":"exact"}],"termid":"GO:0007150"}


id: PBO:0049273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 beta","termid":"PBO:0049273"}


id: PBO:0070077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 34, pseudogene","termid":"PBO:0070077"}


id: GO:0160013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2-hydroxyisobutanoyl)-L-lysyl-[protein] + NAD+ = 2''-O-(2-hydroxyisobutanoyl)-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["PMID:31328167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NAD-dependent protein de-2-hydroxyisobutyrylase activity","secondary_identifiers":["RHEA:24364"],"termid":"GO:0160013"}


id: PBO:0068243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal pseudogene 5","termid":"PBO:0068243"}


id: PBO:0049042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 33","termid":"PBO:0049042"}


id: PBO:0070631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 2","termid":"PBO:0070631"}


id: PBO:0057300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 514a-1","termid":"PBO:0057300"}


id: GO:0035955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of dipeptide transport by stopping, preventing or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17005992","PMID:9427760","PMID:10850718","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035955)","synonyms":[{"name":"negative regulation of dipeptide transport by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of dipeptide transport by negative regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035955"}


id: MONDO:0020823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"infantile miliaria","secondary_identifiers":["MEDGEN:697609","SCTID:402824003","UMLS:C1274264"],"termid":"MONDO:0020823","xrefs":{"Monarch":{"xref_id":"0020823"}}}


id: PBO:0064460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha 1, catalytic subunit","termid":"PBO:0064460"}


id: MONDO:0018704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete actinomycosis (obsolete MONDO:0018704)","termid":"MONDO:0018704","xrefs":{"Monarch":{"xref_id":"0018704"}}}


id: FYPO:0005744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein transport","termid":"FYPO:0005744"}


id: PBO:0060329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IG","termid":"PBO:0060329"}


id: PBO:0087093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L8A; required for processing of 27SA3 pre-rRNA to 27SB during assembly of large subunit; binds Domain I of 25S, 5.8 S rRNAs; mutation results in decreased amounts of free 60S subunits; RPL8B has paralog RPL8A from whole genome duplication; RPL8A or RPL8B ribosomes not functionally interchangeable; proportions of Rpl8ap, Rpl8bp in 80S ribosome differ in glucose and glycerol; homologous to mammalian ribosomal protein L7A, no bacterial homolog","termid":"PBO:0087093"}


id: PBO:0078635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 6","termid":"PBO:0078635"}


id: PBO:0028477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_galactose-specific_cell-cell_adhesion","termid":"PBO:0028477"}


id: MONDO:0001434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylitis","termid":"MONDO:0003937"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory spondylopathy","secondary_identifiers":["MEDGEN:215416","SCTID:202649003","DOID:12105","UMLS:C0949690","ICD9:720.89","ICD9:720.81","ICD9:720.9"],"synonyms":[{"name":"inflammatory spondylopathies in disease EC","type":"exact"},{"name":"inflammatory spondylopathies in disease classified elsewhere","type":"narrow"},{"name":"inflammatory spondylopathy in disease classified elsewhere","type":"narrow"}],"termid":"MONDO:0001434","xrefs":{"Monarch":{"xref_id":"0001434"}}}


id: PBO:0066984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 287","termid":"PBO:0066984"}


id: PBO:0002390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phoshorylceramide synthase regulatory subunit Kei1 (predicted)","termid":"PBO:0002390"}


id: PBO:0028827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028827"}


id: GO:0035028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a leading edge cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"leading edge cell fate commitment","termid":"GO:0035027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leading edge cell fate determination","termid":"GO:0035028"}


id: PBO:0079341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 25, pseudogene","termid":"PBO:0079341"}


id: GO:0070061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the D- or L-enantiomer of fructose, the ketohexose arabino-hex-2-ulose.","definition_xrefs":["GOC:BHF","GOC:mah","CHEBI:28757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"fructose binding","termid":"GO:0070061"}


id: MONDO:1011753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile with age-dependent emphysema hypotrichosis, non-human animal","secondary_identifiers":["OMIA:001458"],"termid":"MONDO:1011753","xrefs":{"Monarch":{"xref_id":"1011753"}}}


id: GO:0003199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of a cardiac valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"},{"relation_name":"part_of","term_name":"heart valve formation","termid":"GO:0003188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition involved in heart valve formation","synonyms":[{"name":"endocardial cushion to mesenchymal transition involved in valve formation","type":"exact"}],"termid":"GO:0003199"}


id: PBO:0051057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3-9","termid":"PBO:0051057"}


id: MONDO:1012205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteodystrophy, non-human animal","termid":"MONDO:1011951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteodystrophy, rabbit","secondary_identifiers":["OMIA:000753-9986"],"termid":"MONDO:1012205","xrefs":{"Monarch":{"xref_id":"1012205"}}}


id: PBO:0041841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 21","termid":"PBO:0041841"}


id: PBO:0081727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 655","termid":"PBO:0081727"}


id: MONDO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleromyxedema is a rare, severe skin disorder. Signs and symptoms include abnormal accumulation of mucin in the skin (mucinosis), causing papular and sclerodermoid bumps; increased production of fibroblasts (connective tissue cells) in the absence of a thyroid disorder; and monoclonal gammopathy (abnormal proteins in the blood). It often involves internal organs and may affect various body systems. The cause of scleromyxedema is not known. There is no standard treatment. Management may involve the use of intravenous immunoglobulin (IVIG), plasmapheresis, thalidomide and corticoids, or more aggressive interventions, such as autologous bone marrow transplantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"lichen myxedematosus","termid":"MONDO:0018432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scleromyxedema","secondary_identifiers":["MedDRA:10055046","NCIT:C85061","MEDGEN:120476","MESH:D053718","UMLS:C0263390","Orphanet:167635","GARD:7615","ICD9:701.8","SCTID:402468007"],"synonyms":[{"name":"Arndt-Gottron disease","type":"exact"},{"name":"Scleromyxedema","type":"exact"},{"name":"generalised lichenoid papular eruption","type":"exact"},{"name":"generalised papular and sclerodermoid","type":"related"},{"name":"generalised papular and sclerodermoid lichen myxedematosus","type":"exact"},{"name":"generalized lichenoid papular eruption","type":"exact"},{"name":"generalized papular and sclerodermoid","type":"related"},{"name":"generalized papular and sclerodermoid lichen myxedematosus","type":"exact"},{"name":"lichen myxedematosus","type":"related"},{"name":"mucinosis, papular","type":"related"},{"name":"myxedematosus, lichen","type":"related"},{"name":"papular mucinosis","type":"related"},{"name":"scleromyxoedema","type":"exact"}],"termid":"MONDO:0015665","xrefs":{"Monarch":{"xref_id":"0015665"}}}


id: MONDO:0005481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of allergic contact dermatitis that results from exposure to nickel","definition_xrefs":["EFO:0005320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contact dermatitis","termid":"MONDO:0005480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"contact dermatitis due to nickel","secondary_identifiers":["MEDGEN:671387","SCTID:93419003","UMLS:C0684345"],"termid":"MONDO:0005481","xrefs":{"Monarch":{"xref_id":"0005481"}}}


id: GO:0033336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the caudal fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin development","termid":"GO:0033338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal fin development","termid":"GO:0033336"}


id: PBO:0070996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 20","termid":"PBO:0070996"}


id: MONDO:0007209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Weismann-Netter syndrome is a rare, genetic, primary, bent bone dysplasia characterized by anterior diaphyseal bowing of the tibia and fibula, broadening of the fibula, posterior cortical thickening of both bones and short stature. Additional skeletal abnormalities include scoliosis with marked lumbar lordosis, horizontal sacrum and square iliac wings and/or, less frequently, vertebral malformations, abnormal shape of the clavicles and ribs, calvarial hyperostosis and delayed eruption of permanent teeth. Delayed ambulation is also frequently associated.","definition_xrefs":["Orphanet:3344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bent bone dysplasia","termid":"MONDO:0019698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weismann-Netter syndrome","secondary_identifiers":["NORD:1843","OMIM:112350","UMLS:C1862172","SCTID:715532007","icd11.foundation:180927608","GARD:5232","MEDGEN:350610","MESH:C537082"],"synonyms":[{"name":"Toxopachyosteose Diaphysaire Tibio-Peroniere","type":"related"},{"name":"WEISMANN-NETTER syndrome","type":"exact"},{"name":"WNS","type":"exact"},{"name":"Weismann Netter Stuhl Syndrome","type":"exact"},{"name":"Weismann Netter syndrome","type":"exact"},{"name":"Weismann-Netter syndrome","type":"exact"},{"name":"Weismann-Netter-Stuhl syndrome","type":"exact"},{"name":"anterior bowing of legs with dwarfism","type":"exact"},{"name":"bowing of legs, anterior with dwarfism","type":"related"},{"name":"bowing of legs, anterior, with dwarfism","type":"related"}],"termid":"MONDO:0007209","xrefs":{"Monarch":{"xref_id":"0007209"}}}


id: FYPO:0004266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cortical microtubule cytoskeleton does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abnormal protein localization to cortical microtubule cytoskeleton","termid":"FYPO:0004265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to cortical microtubule cytoskeleton","synonyms":[{"name":"abolished protein localisation to cortical microtubule cytoskeleton","type":"exact"},{"name":"protein absent from cortical microtubule cytoskeleton","type":"related"},{"name":"protein localization to cortical microtubule cytoskeleton abolished","type":"exact"}],"termid":"FYPO:0004266"}


id: PBO:0027423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_aseptate_vegetative_cell","termid":"PBO:0027423"}


id: GO:0045900
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translational elongation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"negatively_regulates","term_name":"translational elongation","termid":"GO:0006414"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of translational elongation","type":"exact"},{"name":"down-regulation of translational elongation","type":"exact"},{"name":"downregulation of translational elongation","type":"exact"},{"name":"inhibition of translational elongation","type":"narrow"}],"termid":"GO:0045900","terms_by_termid":{"GO:2001125":null}}


id: PBO:0066157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP8 N-terminal like","termid":"PBO:0066157"}


id: PBO:0001781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvyltransferase Pvg1","termid":"PBO:0001781"}


id: GO:0043907
data:
  {"annotated_genes":["SJAG_01259"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105394],"is_not":false,"summary":null,"term":"GO:0043907"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Cys-tRNA(Pro).","definition_xrefs":["PMID:15886196","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0140098","GO:0003674","GO:0003824","GO:0140101","GO:0016788"],"is_obsolete":false,"name":"Cys-tRNA(Pro) hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cys-tRNA(Pro) deacetylase activity","type":"exact"},{"name":"Cys-tRNAPro hydrolase activity","type":"exact"}],"termid":"GO:0043907","terms_by_termid":{"GO:0043907":null}}


id: GO:0035003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The most apical region of the lateral plasma membrane of an invertebrate epithelial cell. The subapical complex lies above the zonula adherens and the septate junction, and is comparable to the position of the tight junction of vertebrate cells.","definition_xrefs":["PMID:11752566","PMID:12500938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"apical junction complex","termid":"GO:0043296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"subapical complex","synonyms":[{"name":"SAC","type":"broad"}],"termid":"GO:0035003"}


id: PBO:0036509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent reductase for Dph3, Cbr1 (predicted)","termid":"PBO:0036509"}


id: PBO:0065111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCE antisense RNA 1","termid":"PBO:0065111"}


id: MONDO:0060671
data:
  {"annotated_genes":["SJAG_02712","SJAG_03557"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86836,86837],"is_not":false,"summary":null,"term":"MONDO:0060671"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02712":null,"SJAG_03557":null},"genotype_count":0,"is_obsolete":false,"name":"epilepsy, juvenile myoclonic, susceptibility to, 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111325","MEDGEN:1647781","OMIM:617924","UMLS:C4693613"],"synonyms":[{"name":"EJM10","type":"related"},{"name":"epilepsy, juvenile myoclonic, susceptibility to, 10","type":"exact"}],"termid":"MONDO:0060671","terms_by_termid":{"MONDO:0060671":null},"xrefs":{"Monarch":{"xref_id":"0060671"}}}


id: PBO:0088624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA-binding protein","termid":"PBO:0088624"}


id: FYPO:0001052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis when smaller than wild type, and then septates to give rise to a cut phenotype. In a cut phenotype, a cell undergoes septation despite abnormal mitosis such that the septum physically divides the nucleus into two parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"has_part","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"},{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000004","FYPO:0000032","FYPO:0000337","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"cut, small cell","synonyms":[{"name":"cut following advanced onset of mitosis","type":"exact"},{"name":"cut, small cell during mitotic cell cycle","type":"related"},{"name":"cut, small cell during vegetative growth","type":"exact"},{"name":"mitotic catastrophe with cut, small cell","type":"related"},{"name":"septation following abnormal nuclear division, small cell","type":"exact"},{"name":"small cut cell","type":"exact"}],"termid":"FYPO:0001052"}


id: PBO:0067006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 12, pseudogene","termid":"PBO:0067006"}


id: GO:0003382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"epithelial cell development","termid":"GO:0002064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell morphogenesis","termid":"GO:0003382"}


id: FYPO:0004605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the total distance travelled by the SPB during horsetail movement is decreased. Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I. PMID:24954111","definition_xrefs":["GO:0030989","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal horsetail movement","termid":"FYPO:0000197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0000631"],"is_obsolete":false,"name":"decreased distance travelled by the spindle pole body during horsetail movement","synonyms":[{"name":"decreased dynein-driven meiotic oscillatory nuclear movement","type":"related"},{"name":"decreased horsetail nuclear movement","type":"related"},{"name":"reduced horsetail movement","type":"related"}],"termid":"FYPO:0004605"}


id: PBO:0015702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair ligase Lig4","termid":"PBO:0015702"}


id: GO:0042330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to an external stimulus.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"part_of","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taxis","secondary_identifiers":["Wikipedia:Taxis"],"synonyms":[{"name":"directed movement in response to stimulus","type":"exact"}],"termid":"GO:0042330"}


id: PBO:0066792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 91","termid":"PBO:0066792"}


id: PBO:0057854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3165","termid":"PBO:0057854"}


id: GO:1903293
data:
  {"annotated_genes":["SJAG_01599","SJAG_03500","SJAG_03631","SJAG_02536","SJAG_04968","SJAG_00526","SJAG_00078","SJAG_00369","SJAG_03793","SJAG_00534","SJAG_03126","SJAG_03940","SJAG_01270","SJAG_03353","SJAG_03681","SJAG_01906","SJAG_00600","SJAG_01187","SJAG_04638","SJAG_00229","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112792,118002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005955"},{"annotations":[99791,117653,111400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990567"},{"annotations":[112187,109187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071595"},{"annotations":[106869,106045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030289"},{"annotations":[116027,111404,92482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000164"},{"annotations":[97356,92429,89472,99087,100762,115343,103980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000159"},{"annotations":[114921,117384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008287"},{"annotations":[111405,97195,116028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072357"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of phosphatase activity.","definition_xrefs":["GO_REF:0000088","PMID:24766807","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00229":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_00534":null,"SJAG_00600":null,"SJAG_00823":null,"SJAG_01187":null,"SJAG_01270":null,"SJAG_01599":null,"SJAG_01906":null,"SJAG_02536":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03500":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03793":null,"SJAG_03940":null,"SJAG_04638":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903293","terms_by_termid":{"GO:0000159":null,"GO:0000164":null,"GO:0005955":null,"GO:0008287":null,"GO:0030289":null,"GO:0071595":null,"GO:0072357":null,"GO:1990567":null}}


id: PBO:0081182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type and G-patch domain containing","termid":"PBO:0081182"}


id: GO:0090670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an RNA is transported to, or maintained in, a Cajal body.","definition_xrefs":["PMID:25467444","GOC:BHF","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization to nucleus","termid":"GO:0090685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"RNA localization to Cajal body","termid":"GO:0090670"}


id: GO:0038121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 21 (CCL21) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:15059845","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-C motif chemokine 21 receptor activity","synonyms":[{"name":"CCL21 receptor activity","type":"related"}],"termid":"GO:0038121"}


id: PBO:0059412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35 pseudogene 2","termid":"PBO:0059412"}


id: MONDO:0015311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the presence of a unilateral angioma on the face and autistic developmental problems characterized by language delay and atypical social interactions.","definition_xrefs":["Orphanet:137911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism-facial port-wine stain syndrome","secondary_identifiers":["GARD:10303"],"synonyms":[{"name":"autism with port-wine stain","type":"related"}],"termid":"MONDO:0015311","xrefs":{"Monarch":{"xref_id":"0015311"}}}


id: PBO:0044637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decorin","termid":"PBO:0044637"}


id: PBO:0087328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting factor, central regulator of spatial protein quality control; physically and functionally interacts with chaperones to promote sorting and deposition of misfolded proteins into cytosolic compartments; involved in destabilization of [URE3] prions; CUR1 has a paralog, BTN2, that arose from the whole genome duplication","termid":"PBO:0087328"}


id: PBO:0034637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_UV-damage_excision_repair_during_mitotic_G2_phase","termid":"PBO:0034637"}


id: GO:0070157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling proline to prolyl-tRNA in a mitochondrion, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolyl-tRNA aminoacylation","termid":"GO:0006433"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467","GO:0140053","GO:0006520"],"is_obsolete":false,"name":"mitochondrial prolyl-tRNA aminoacylation","termid":"GO:0070157"}


id: MONDO:0700214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Herpesviridae infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Herpesviridae infectious disease, non-human animal","termid":"MONDO:0700214","xrefs":{"Monarch":{"xref_id":"0700214"}}}


id: PBO:0091515
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein UBiquitin ligase","termid":"PBO:0091515"}


id: MONDO:0018793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"temporomandibular joint disorder","termid":"MONDO:0005473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary condylar hyperplasia","secondary_identifiers":["MEDGEN:1799993","GARD:21966","Orphanet:477781","UMLS:C5568570"],"synonyms":[{"name":"type 1 condylar hyperplasia","type":"exact"}],"termid":"MONDO:0018793","xrefs":{"Monarch":{"xref_id":"0018793"}}}


id: PBO:0060608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCBP2 antisense 2 (head to head)","termid":"PBO:0060608"}


id: PBO:0026709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_MCM_complex_binding","termid":"PBO:0026709"}


id: FYPO:0004004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which pre-replicative complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal protein-containing complex assembly","termid":"FYPO:0006839"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal pre-replicative complex assembly","synonyms":[{"name":"normal pre-RC assembly","type":"exact"},{"name":"normal pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"normal pre-replicative complex assembly during vegetative growth","type":"exact"},{"name":"normal pre-replicative complex formation","type":"exact"}],"termid":"FYPO:0004004"}


id: GO:0009786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of asymmetric cell division","termid":"GO:0009786"}


id: GO:0003131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from mesodermal cells to endodermal cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesodermal-endodermal cell signaling","synonyms":[{"name":"mesodermal-endodermal cell signalling","type":"exact"}],"termid":"GO:0003131"}


id: PBO:0004460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp43 (predicted)","termid":"PBO:0004460"}


id: PBO:0079383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI pseudogene 1","termid":"PBO:0079383"}


id: PBO:0039680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family A member 1","termid":"PBO:0039680"}


id: PBO:0061334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B12","termid":"PBO:0061334"}


id: GO:0061926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the formation of radial glial cell scaffolds.","definition_xrefs":["PMID:22076441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell morphogenesis","termid":"GO:0010770"},{"relation_name":"is_a","term_name":"regulation of formation of radial glial scaffolds","termid":"GO:0061924"},{"relation_name":"positively_regulates","term_name":"formation of radial glial scaffolds","termid":"GO:0021943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of radial glial scaffolds","synonyms":[{"name":"positive regulation of Bergmann fiber biosynthesis","type":"related"},{"name":"positive regulation of Bergmann fiber formation","type":"related"},{"name":"positive regulation of radial glial scaffold formation","type":"exact"}],"termid":"GO:0061926"}


id: PR:Q9P7R6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3B subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20978:SF0","OMA:SCHPO03892","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C211.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.05","secondary_identifiers":["UniProtKB:Q9P7R6"],"synonyms":[{"name":"Spom972h-SF3B5","type":"exact"}],"termid":"PR:Q9P7R6"}


id: PBO:0025549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-X ortholog, FANCM-MHF complex subunit Mhf2","termid":"PBO:0025549"}


id: PBO:0066573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh family C glycoprotein","termid":"PBO:0066573"}


id: GO:0102217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: n ATP + n H2O + a 6-phosphogluco-maltodextrin = n AMP + n hydrogenphosphate + a poly-6-phosphogluco-maltodextrin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-phosphoglucan, water dikinase activity (obsolete GO:0102217)","termid":"GO:0102217"}


id: PBO:0068296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 2 pseudogene 1","termid":"PBO:0068296"}


id: GO:0097084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a vascular smooth muscle cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell development","termid":"GO:0055001"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell development","synonyms":[{"name":"vascular smooth muscle cell development","type":"exact"}],"termid":"GO:0097084"}


id: PR:Q9Y7L9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC685.08 gene.","definition_xrefs":["UniProtKB:Q9Y7L9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C685.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.08","synonyms":[{"name":"Spom972h-SPBC685.08","type":"exact"}],"termid":"PR:Q9Y7L9"}


id: PBO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transporter (predicted)","termid":"PBO:0000380"}


id: PBO:0063710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5","termid":"PBO:0063710"}


id: PBO:0073910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A1 pseudogene 1","termid":"PBO:0073910"}


id: MONDO:0021155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of cone-rod dystrophy.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked cone-rod dystrophy","synonyms":[{"name":"cone-rod dystrophy, X-linked","type":"exact"}],"termid":"MONDO:0021155","xrefs":{"Monarch":{"xref_id":"0021155"}}}


id: GO:0023040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which information is sent from one location to another, within a living organism or between living organisms, via ionic flux.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signaling via ionic flux (obsolete GO:0023040)","synonyms":[{"name":"signaling via ionic flux","type":"exact"},{"name":"signalling via ionic flux","type":"exact"}],"termid":"GO:0023040"}


id: PBO:0062468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 159 pseudogene","termid":"PBO:0062468"}


id: PBO:0038409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_positively_regulates_activity_of","termid":"PBO:0038409"}


id: PR:Q9UT29
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8F11.08c gene.","definition_xrefs":["UniProtKB:Q9UT29","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8F11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.08c","synonyms":[{"name":"Spom972h-SPAC8F11.08c","type":"exact"}],"termid":"PR:Q9UT29"}


id: FYPO:0008033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is elongated, has no septum, and contains one nucleus, and is arrested in mototic S-phase","direct_ancestors":[{"relation_name":"is_a","term_name":"elongated mononucleate aseptate vegetative cell","termid":"FYPO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"elongated mononucleate aseptate cell with cell cycle arrest in mitotic S-phase","termid":"FYPO:0008033"}


id: GO:0099125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein kinase complex comprising a conserved PAK/GC/Ste20 family kinase, leucine rich repeat protein Sog2 family, which function as part of the cell shape network.","definition_xrefs":["PMID:23462181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PAK family kinase-Sog2 complex","termid":"GO:0099125"}


id: GO:2000933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellotriose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"cellotriose metabolic process","termid":"GO:2000893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellotriose metabolic process","synonyms":[{"name":"regulation of cellotriose metabolism","type":"exact"}],"termid":"GO:2000933"}


id: GO:0022881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetylgalactosamine(out) = protein histidine + N-acetylgalactosamine phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"N-acetylgalactosamine transmembrane transporter activity","termid":"GO:0015571"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0016740","GO:0003824","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N-acetylgalactosamine phosphotransferase system transporter activity","synonyms":[{"name":"N-acetylgalactosamine PTS transporter activity","type":"exact"}],"termid":"GO:0022881"}


id: FYPO:0003758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic spindle elongation begins, but mitotic sister chromatid segregation stops before completing separation of chromosomes.","definition_xrefs":["PMID:8978688","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"},{"relation_name":"output_of","term_name":"abnormal mitotic cell cycle arrest with replicated DNA","termid":"FYPO:0000444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0000337"],"is_obsolete":false,"name":"mitotic spindle elongation without chromosome separation","synonyms":[{"name":"archery-bow phenotype","type":"exact"},{"name":"incomplete mitotic sister chromatid segregation, with elongated mitotic spindle and unseparated DNA","type":"exact"},{"name":"incomplete mitotic sister chromatid segregation, with unseparated DNA","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with unseparated DNA","type":"related"},{"name":"spindle elongation in absence of chromosome separation","type":"exact"},{"name":"spindle elongation without chromosome separation during mitotic cell cycle","type":"related"},{"name":"spindle elongation without chromosome separation during vegetative growth","type":"exact"}],"termid":"FYPO:0003758"}


id: MONDO:0020172
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the skin of eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid neoplasm","termid":"MONDO:0002235"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"palpebral epidermal tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:712469","Orphanet:98581","SCTID:126499002","UMLS:C1290083"],"synonyms":[{"name":"neoplasm of skin of eyelid","type":"exact"},{"name":"skin of eyelid neoplasm","type":"exact"},{"name":"skin of eyelid neoplasm (disease)","type":"exact"},{"name":"skin of eyelid tumor","type":"exact"},{"name":"skin of eyelid tumour","type":"exact"},{"name":"tumor of skin of eyelid","type":"exact"},{"name":"tumour of skin of eyelid","type":"exact"}],"termid":"MONDO:0020172","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0020172"}}}


id: PBO:0087383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol/phosphatidylinositol-4-phosphate (PI(4)P) exchanger; one of seven members of the yeast oxysterol binding protein family; involved in negative regulation of Sec14p-dependent Golgi complex secretory functions, peripheral membrane protein that localizes to the Golgi complex; KES1 has a paralog, HES1, that arose from the whole genome duplication","termid":"PBO:0087383"}


id: FYPO:0003256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal proline import","synonyms":[{"name":"abnormal L-proline import","type":"exact"},{"name":"abnormal L-proline import across plasma membrane","type":"exact"},{"name":"abnormal proline import during mitotic cell cycle","type":"related"},{"name":"abnormal proline import during vegetative growth","type":"exact"},{"name":"abnormal proline import into cell","type":"exact"},{"name":"abnormal proline uptake","type":"exact"}],"termid":"FYPO:0003256"}


id: MONDO:0016735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I, indolent and relatively circumscribed brain tumor. Morphologically it is characterized by the presence of astrocytes that line vascular and hyalinized pseudopapillae. In between the pseudopapillae aggregates of neurocytes, large neurons, and ganglioid cells are present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary glioneuronal tumor","secondary_identifiers":["ICDO:9509/1","UMLS:C2985174","DOID:0081283","MEDGEN:457400","ONCOTREE:PGNT","NCIT:C92554","GARD:20730","Orphanet:251962"],"synonyms":[{"name":"PGNT","type":"exact"},{"name":"papillary glioneuronal tumor (WHO grade I)","type":"exact"},{"name":"papillary glioneuronal tumour (WHO grade I)","type":"exact"},{"name":"pseudopapillary ganglioglioneurocytoma","type":"exact"},{"name":"pseudopapillary neurocytoma with glial differentiation","type":"exact"}],"termid":"MONDO:0016735","xrefs":{"Monarch":{"xref_id":"0016735"}}}


id: PBO:0108911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP50 pseudogene 4","termid":"PBO:0108911"}


id: PBO:0059323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 8","termid":"PBO:0059323"}


id: PBO:0042950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 4","termid":"PBO:0042950"}


id: PBO:0072192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 9","termid":"PBO:0072192"}


id: GO:0009154
data:
  {"annotated_genes":["SJAG_06622","SJAG_02785","SJAG_04870","SJAG_02481","SJAG_00027","SJAG_03828","SJAG_04192","SJAG_04495","SJAG_03373","SJAG_04048","SJAG_02107","SJAG_02945","SJAG_00633","SJAG_00461","SJAG_00605","SJAG_00685","SJAG_01310","SJAG_02009","SJAG_04334","SJAG_05314","SJAG_03660","SJAG_03852","SJAG_02369","SJAG_06621","SJAG_03903","SJAG_02135","SJAG_00839","SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[115824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[94030,103126,102870,94517,105294,108386,108388,104926,108387,108385,103949,108389,108390,108848,108852,108853,108854,115796,97772,108849,97494,104924,104925,108384,108850,108851,105295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[103951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[88123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[111027,97690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[75583,72605],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[88726],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"},{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"ribonucleotide catabolic process","termid":"GO:0009261"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleotide breakdown","type":"exact"},{"name":"purine ribonucleotide catabolism","type":"exact"},{"name":"purine ribonucleotide degradation","type":"exact"}],"termid":"GO:0009154","terms_by_termid":{"GO:0006096":null,"GO:0006110":null,"GO:0006198":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1901911":null}}


id: GO:0047705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 bilirubin + O2 = 2 biliverdin + 2 H2O.","definition_xrefs":["EC:1.3.3.5","RHEA:20980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"bilirubin oxidase activity","secondary_identifiers":["KEGG_REACTION:R02394","MetaCyc:BILIRUBIN-OXIDASE-RXN"],"synonyms":[{"name":"bilirubin oxidase M-1","type":"related"},{"name":"bilirubin:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047705"}


id: GO:0042952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pathway of aromatic compound degradation by ortho-cleavage; one branch converts protocatechuate, derived from phenolic compounds, to beta-ketoadipate, and the other branch converts catechol, generated from various aromatic hydrocarbons, amino aromatics, and lignin monomers, also to beta-ketoadipate. Two additional steps accomplish the conversion of beta-ketoadipate to tricarboxylic acid cycle intermediates.","definition_xrefs":["GOC:jl","PMID:8905091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-ketoadipate pathway","synonyms":[{"name":"ortho-cleavage pathway","type":"broad"}],"termid":"GO:0042952"}


id: GO:1904853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an ascospore wall.","definition_xrefs":["GO_REF:0000087","PMID:24623719","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spore cell wall","termid":"GO:0099614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to ascospore wall","synonyms":[{"name":"protein localisation in ascospore wall","type":"exact"},{"name":"protein localisation to ascospore wall","type":"exact"},{"name":"protein localization in ascospore wall","type":"exact"}],"termid":"GO:1904853"}


id: GO:1904472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelin production.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15560120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of endothelin production","termid":"GO:1904470"},{"relation_name":"positively_regulates","term_name":"endothelin production","termid":"GO:1990775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of endothelin production","synonyms":[{"name":"activation of EDN1 secretion","type":"narrow"},{"name":"activation of EDN2 secretion","type":"narrow"},{"name":"activation of EDN3 secretion","type":"narrow"},{"name":"activation of endothelin secretion","type":"narrow"},{"name":"activation of endothelin-1 secretion","type":"narrow"},{"name":"activation of endothelin-2 secretion","type":"narrow"},{"name":"activation of endothelin-3 secretion","type":"narrow"},{"name":"positive regulation of EDN1 secretion","type":"narrow"},{"name":"positive regulation of EDN2 secretion","type":"narrow"},{"name":"positive regulation of EDN3 secretion","type":"narrow"},{"name":"positive regulation of endothelin secretion","type":"narrow"},{"name":"positive regulation of endothelin-1 secretion","type":"narrow"},{"name":"positive regulation of endothelin-2 secretion","type":"narrow"},{"name":"positive regulation of endothelin-3 secretion","type":"narrow"},{"name":"up regulation of EDN1 secretion","type":"narrow"},{"name":"up regulation of EDN2 secretion","type":"narrow"},{"name":"up regulation of EDN3 secretion","type":"narrow"},{"name":"up regulation of endothelin secretion","type":"exact"},{"name":"up regulation of endothelin-1 secretion","type":"narrow"},{"name":"up regulation of endothelin-2 secretion","type":"narrow"},{"name":"up regulation of endothelin-3 secretion","type":"narrow"},{"name":"up-regulation of EDN1 secretion","type":"narrow"},{"name":"up-regulation of EDN2 secretion","type":"narrow"},{"name":"up-regulation of EDN3 secretion","type":"narrow"},{"name":"up-regulation of endothelin secretion","type":"exact"},{"name":"up-regulation of endothelin-1 secretion","type":"narrow"},{"name":"up-regulation of endothelin-2 secretion","type":"narrow"},{"name":"up-regulation of endothelin-3 secretion","type":"narrow"},{"name":"upregulation of EDN1 secretion","type":"narrow"},{"name":"upregulation of EDN2 secretion","type":"narrow"},{"name":"upregulation of EDN3 secretion","type":"narrow"},{"name":"upregulation of endothelin secretion","type":"exact"},{"name":"upregulation of endothelin-1 secretion","type":"narrow"},{"name":"upregulation of endothelin-2 secretion","type":"narrow"},{"name":"upregulation of endothelin-3 secretion","type":"narrow"}],"termid":"GO:1904472"}


id: GO:0014842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle satellite cell proliferation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle","PMID:16607119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell proliferation","termid":"GO:0014857"},{"relation_name":"regulates","term_name":"skeletal muscle satellite cell proliferation","termid":"GO:0014841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle satellite cell proliferation","termid":"GO:0014842"}


id: GO:0018528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: iminodiacetate + OH- = H+ + 2 e- + glyoxylate + glycine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete iminodiacetate dehydrogenase activity (obsolete GO:0018528)","termid":"GO:0018528"}


id: SO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature start codon is gained.","definition_xrefs":["Sanger:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_premature_start_codon_variant","termid":"SO:0001983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_premature_start_codon_gain_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"5 prime UTR premature start codon gain variant","type":"exact"},{"name":"Jannovar:5_prime_UTR_premature_start_codon_gain_variant","type":"exact"},{"name":"snpEff:START_GAINED","type":"exact"}],"termid":"SO:0001988"}


id: GO:0050299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = ADP + 2 H+ + streptomycin 3''-phosphate.","definition_xrefs":["RHEA:18377","EC:2.7.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"streptomycin 3''-kinase activity","secondary_identifiers":["KEGG_REACTION:R02227","MetaCyc:STREPTOMYCIN-3-KINASE-RXN"],"synonyms":[{"name":"ATP:streptomycin 3''-phosphotransferase activity","type":"related"},{"name":"streptomycin 3''-kinase (phosphorylating)","type":"related"},{"name":"streptomycin 3''-phosphotransferase activity","type":"related"}],"termid":"GO:0050299"}


id: PBO:0028788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_heterochromatin_assembly","termid":"PBO:0028788"}


id: GO:0040035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of the hermaphrodite genitalia over time, from formation to the mature structures.","definition_xrefs":["GOC:ems","ISBN:0140512888"],"gene_count":0,"genotype_count":0,"name":"obsolete hermaphrodite genitalia development (obsolete GO:0040035)","termid":"GO:0040035"}


id: PBO:0018190
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axonal neuropathy","termid":"PBO:0018190"}


id: PBO:0027726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_at_high_temperature","termid":"PBO:0027726"}


id: GO:1900151
data:
  {"annotated_genes":["SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.","definition_xrefs":["GOC:TermGenie","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"GO:1900151","terms_by_termid":{"GO:0060212":null}}


id: GO:0031727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR2 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CCR2 chemokine receptor binding","synonyms":[{"name":"CCR2 chemokine receptor ligand","type":"narrow"},{"name":"monocyte chemoattractant protein 1 receptor binding","type":"exact"}],"termid":"GO:0031727"}


id: GO:1900046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemostasis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"regulates","term_name":"hemostasis","termid":"GO:0007599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemostasis","termid":"GO:1900046"}


id: GO:0003421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the columnar cartilage along the axis of a long bone that contributes to bone growth.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage axis specification","synonyms":[{"name":"growth plate cartilage axis determination","type":"related"}],"termid":"GO:0003421"}


id: MONDO:0043904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of LEISHMANIASIS, CUTANEOUS caused by Leishmania aethiopica in Ethiopia and Kenya, L. pifanoi in Venezuela, L. braziliensis in South America, and L. mexicana in Central America. This disease is characterized by massive dissemination of skin lesions without visceral involvement.","definition_xrefs":["MESH:D016774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous leishmaniasis","termid":"MONDO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"leishmaniasis, diffuse cutaneous","secondary_identifiers":["MEDGEN:39020","UMLS:C0085311","SCTID:38573008"],"synonyms":[{"name":"Leishmaniases, diffuse cutaneous","type":"related"},{"name":"cheloid leishmaniasis","type":"related"},{"name":"cutaneous Leishmaniases, diffuse","type":"related"},{"name":"cutaneous leishmaniasis, diffuse","type":"related"},{"name":"dcl - diffuse cutaneous leishmaniasis","type":"related"},{"name":"diffuse cutaneous Leishmaniases","type":"related"},{"name":"diffuse cutaneous leishmaniasis","type":"exact"},{"name":"leproid leishmaniasis","type":"related"},{"name":"lepromatous cutaneous leishmaniasis","type":"related"}],"termid":"MONDO:0043904","xrefs":{"Monarch":{"xref_id":"0043904"}}}


id: PBO:0070320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 9","termid":"PBO:0070320"}


id: GO:0009707
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the chloroplast envelope.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid outer membrane","termid":"GO:0009527"},{"relation_name":"is_a","term_name":"chloroplast membrane","termid":"GO:0031969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast outer membrane","synonyms":[{"name":"chloroplast outer envelope","type":"exact"}],"termid":"GO:0009707"}


id: PBO:0072120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 9","termid":"PBO:0072120"}


id: PBO:0001524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaffold protein Scd2","termid":"PBO:0001524"}


id: GO:0060429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelium development","termid":"GO:0060429"}


id: PBO:0080121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAC14 antisense RNA 1","termid":"PBO:0080121"}


id: MONDO:0021937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Asrar Facharzt Haque syndrome (obsolete MONDO:0021937)","termid":"MONDO:0021937","xrefs":{"Monarch":{"xref_id":"0021937"}}}


id: GO:0032188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a contractile ring is assembled in a specific location as part of a process of cell cycle cytokinesis.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of actomyosin contractile ring localization (obsolete GO:0032188)","synonyms":[{"name":"actomyosin ring positioning","type":"related"},{"name":"contractile ring positioning","type":"broad"},{"name":"cytokinesis site selection by contractile ring positioning","type":"exact"},{"name":"establishment of contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"establishment of contractile ring localization involved in cell cycle cytokinesis","type":"exact"},{"name":"establishment of contractile ring localization involved in cytokinesis during cell cycle","type":"related"}],"termid":"GO:0032188"}


id: PBO:0043937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRTC1 pseudogene 1","termid":"PBO:0043937"}


id: PBO:0067040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 57, pseudogene","termid":"PBO:0067040"}


id: GO:0051882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the potential difference across the mitochondrial membrane is reduced from its steady state level.","definition_xrefs":["Wikipedia:Mitochondrion","Wikipedia:Depolarization"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"},{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial depolarization","synonyms":[{"name":"mitochondria depolarization","type":"exact"},{"name":"mitochondrial depolarisation","type":"exact"},{"name":"mitochondrial membrane depolarization","type":"exact"},{"name":"mitochondrion depolarization","type":"exact"}],"termid":"GO:0051882"}


id: MONDO:0002232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the nasal cavity.","direct_ancestors":[{"relation_name":"is_a","term_name":"nasal disorder","termid":"MONDO:0002436"},{"relation_name":"is_a","term_name":"upper respiratory tract disorder","termid":"MONDO:0004867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal cavity disorder","secondary_identifiers":["MEDGEN:137929","SCTID:232340005","DOID:2163","UMLS:C0339820","NCIT:C27102"],"synonyms":[{"name":"disease of nasal cavity","type":"exact"},{"name":"disease or disorder of nasal cavity","type":"exact"},{"name":"disorder of nasal cavity","type":"exact"},{"name":"nasal cavity disease","type":"exact"},{"name":"nasal cavity disease or disorder","type":"exact"},{"name":"nasal cavity disorder","type":"exact"}],"termid":"MONDO:0002232","xrefs":{"Monarch":{"xref_id":"0002232"}}}


id: GO:0140972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of AIM2 inflammasome complex assembly.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of AIM2 inflammasome complex assembly","termid":"GO:0140971"},{"relation_name":"negatively_regulates","term_name":"AIM2 inflammasome complex assembly","termid":"GO:0140970"},{"relation_name":"part_of","term_name":"negative regulation of inflammasome-mediated signaling pathway","termid":"GO:0141086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of AIM2 inflammasome complex assembly","termid":"GO:0140972"}


id: MONDO:0020158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyelids malposition disorder (obsolete MONDO:0020158)","secondary_identifiers":["Orphanet:98567"],"termid":"MONDO:0020158","xrefs":{"Monarch":{"xref_id":"0020158"}}}


id: SO:0000823
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome with origin in a leucoplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"leucoplast_sequence","termid":"SO:0000747"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucoplast_chromosome","synonyms":[{"name":"leucoplast chromosome","type":"exact"}],"termid":"SO:0000823"}


id: MONDO:0003899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myxoid chondrosarcoma occurring in adults.","definition_xrefs":["NCIT:C27378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myxoid chondrosarcoma","termid":"MONDO:0003681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult myxoid chondrosarcoma","secondary_identifiers":["UMLS:C1706731","MEDGEN:312875","DOID:6495"],"synonyms":[{"name":"adult myxoid chondrosarcoma","type":"exact"},{"name":"myxoid chondrosarcoma of adults","type":"exact"}],"termid":"MONDO:0003899","xrefs":{"Monarch":{"xref_id":"0003899"}}}


id: MOD:01297
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 5x(13)C labeled L-proline.","definition_xrefs":["Unimod:772#P","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C labeled L-proline","synonyms":[{"name":"13C(5) Silac label","type":"related"},{"name":"Label:13C(5)","type":"related"}],"termid":"MOD:01297"}


id: MONDO:1012459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiosarcoma, non-human animal","termid":"MONDO:1011823"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiosarcoma, African hunting dog","secondary_identifiers":["OMIA:001813-9622"],"termid":"MONDO:1012459","xrefs":{"Monarch":{"xref_id":"1012459"}}}


id: PR:Q09911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC30D11.14c gene.","definition_xrefs":["UniProtKB:Q09911","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30D11.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.14c","synonyms":[{"name":"Spom972h-SPAC30D11.14c","type":"exact"}],"termid":"PR:Q09911"}


id: PBO:0081605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF528 antisense RNA 1","termid":"PBO:0081605"}


id: MONDO:1011980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dystrophy, non-human animal","secondary_identifiers":["OMIA:000869"],"termid":"MONDO:1011980","xrefs":{"Monarch":{"xref_id":"1011980"}}}


id: PBO:0055123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2542","termid":"PBO:0055123"}


id: FYPO:0001811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-phosphoribosyl diphosphate measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered 5-phosphoribosyl diphosphate level","synonyms":[{"name":"abnormal 5-phosphoribosyl diphosphate level","type":"exact"},{"name":"altered 5-O-phosphono-alpha-D-ribofuranosyl diphosphate level","type":"exact"},{"name":"altered 5-phosphoribosyl diphosphate level during mitotic cell cycle","type":"related"},{"name":"altered 5-phosphoribosyl diphosphate level during vegetative growth","type":"exact"},{"name":"altered cellular 5-phosphoribosyl diphosphate level","type":"exact"}],"termid":"FYPO:0001811"}


id: MONDO:0022323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"allergic contact dermatitis","termid":"MONDO:0006525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"2-hydroxyethyl methacrylate sensitization","secondary_identifiers":["MEDGEN:443922","MESH:C535305","UMLS:C2930873"],"synonyms":[{"name":"2-HEMA sensitization","type":"related"},{"name":"sensitization to 2-hydroxyethyl methacrylate","type":"related"}],"termid":"MONDO:0022323","xrefs":{"Monarch":{"xref_id":"0022323"}}}


id: PBO:0073225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semenogelin 1","termid":"PBO:0073225"}


id: PBO:0027931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_heat","termid":"PBO:0027931"}


id: PBO:0091859
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the S. japonicus gene is about 500 amino acids longer...possibly a gene merge in S. japonicus as this does not splice to adjacent gene","termid":"PBO:0091859"}


id: PBO:0090907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator Bag101","termid":"PBO:0090907"}


id: PBO:0017500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1445 family mitochondrial protein (predicted)","termid":"PBO:0017500"}


id: MONDO:0020168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete kinetic eyelid anomaly (obsolete MONDO:0020168)","secondary_identifiers":["Orphanet:98577"],"termid":"MONDO:0020168","xrefs":{"Monarch":{"xref_id":"0020168"}}}


id: FYPO:0007178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is abolished during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex during vegetative growth","termid":"FYPO:0002555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to medial cortex during mitosis","synonyms":[{"name":"abolished protein localisation to medial cortex during mitosis","type":"exact"},{"name":"abolished protein localization to medial cortex during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex during mitotic M phase","type":"related"},{"name":"abolished protein localization to medial cortex during mitotic nuclear division","type":"exact"},{"name":"abolished protein localization to medial ring during mitosis","type":"exact"},{"name":"protein localization to medial cortex abolished during mitosis","type":"exact"}],"termid":"FYPO:0007178"}


id: GO:0042561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = alpha-amyrin. This reaction is a cyclization and rearrangement of (S)-2,3-epoxysqualene (2,3-oxidosqualene) into alpha-amyrin.","definition_xrefs":["MetaCyc:RXN-8434","PMID:10848960","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"alpha-amyrin synthase activity","termid":"GO:0042561"}


id: GO:0046704
data:
  {"annotated_genes":["SJAG_04665","SJAG_00885","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91945,106726],"is_not":false,"summary":null,"term":"GO:0046704"},{"annotations":[115021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving CDP, cytidine (5'-)diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CDP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CDP metabolism","type":"exact"}],"termid":"GO:0046704","terms_by_termid":{"GO:0046704":null,"GO:0046705":null}}


id: MONDO:0020065
data:
  {"annotated_genes":["SJAG_04840","SJAG_03900"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030676"},{"annotations":[85377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010747"}]},"cv_name":"mondo","definition":"A dystonia that is combined with another movement disorder (e.g., myoclonus, parkinsonism).","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03900":null,"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"combined dystonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19432","MEDGEN:1842879","Orphanet:98203","UMLS:C5680244"],"synonyms":[{"name":"dystonia-plus syndrome","type":"exact"}],"termid":"MONDO:0020065","terms_by_termid":{"MONDO:0010747":null,"MONDO:0030676":null},"xrefs":{"Monarch":{"xref_id":"0020065"}}}


id: PR:O14463
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.07c","secondary_identifiers":["UniProtKB:O14463"],"synonyms":[{"name":"Spom972h-TXN","type":"exact"},{"name":"TR-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Trx-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14463"}


id: PBO:0039520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 1","termid":"PBO:0039520"}


id: GO:0015621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ferric triacetylfusarinine C from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ferric triacetylfusarinine C transmembrane transporter activity","termid":"GO:0015621"}


id: PBO:0046283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 2","termid":"PBO:0046283"}


id: GO:0080150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + S-adenosyl-L-methionine = methylbenzoate + S-adenosyl-L-homocysteine.","definition_xrefs":["MetaCyc:RXN-6722","PMID:10852939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity","secondary_identifiers":["RHEA:36099"],"synonyms":[{"name":"S-adenosyl-L-methionine:benzoate carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0080150"}


id: GO:0036395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of amylase from a cell of the pancreas.","definition_xrefs":["PMID:19028687","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylase secretion","termid":"GO:0036394"},{"relation_name":"part_of","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"pancreatic amylase secretion","termid":"GO:0036395"}


id: MONDO:1011653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniomandibular osteopathy, non-human animal","secondary_identifiers":["OMIA:000236"],"termid":"MONDO:1011653","xrefs":{"Monarch":{"xref_id":"1011653"}}}


id: PBO:0039192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"akirin 2","termid":"PBO:0039192"}


id: MONDO:0002950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of basal cell carcinoma characterized by the presence of clear cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin clear cell basal cell carcinoma","secondary_identifiers":["MEDGEN:275752","DOID:4293","NCIT:C27536","UMLS:C1516599"],"synonyms":[{"name":"clear cell basal cell carcinoma","type":"exact"},{"name":"skin clear cell basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002950","xrefs":{"Monarch":{"xref_id":"0002950"}}}


id: PBO:0108894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 7","termid":"PBO:0108894"}


id: PBO:0067678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 863, pseudogene","termid":"PBO:0067678"}


id: GO:0140260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitochondrial proton-transporting ATP synthase complex.","definition_xrefs":["PMID:12110673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex binding","termid":"GO:0140260"}


id: PBO:0052019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 8","termid":"PBO:0052019"}


id: GO:0140629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a small conductance calcium-activated potassium channel.","definition_xrefs":["PMID:20562108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel inhibitor activity","termid":"GO:0140629"}


id: PBO:0057568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR762 host gene","termid":"PBO:0057568"}


id: MONDO:0011103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the GJB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 3A","secondary_identifiers":["GARD:9933","DOID:0110564","MEDGEN:436512","OMIM:601544","UMLS:C2675750","MESH:C567277"],"synonyms":[{"name":"DFNA3","type":"narrow"},{"name":"DFNA3A","type":"narrow"},{"name":"GJB2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"NSRD1","type":"narrow"},{"name":"autosomal dominant deafness 3A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 3A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in GJB2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 3A","type":"narrow"},{"name":"deafness, autosomal dominant 3A","type":"narrow"},{"name":"deafness, autosomal dominant 3a","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 3","type":"narrow"},{"name":"deafness, autosomal dominant type 3A","type":"narrow"},{"name":"neurosensory nonsyndromic dominant deafness 1","type":"narrow"}],"termid":"MONDO:0011103","xrefs":{"Monarch":{"xref_id":"0011103"}}}


id: MONDO:0023021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism lethal type advanced bone age","termid":"MONDO:0023021","xrefs":{"Monarch":{"xref_id":"0023021"}}}


id: PBO:0030487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_malonic_acid_import","termid":"PBO:0030487"}


id: MONDO:0020076
data:
  {"annotated_genes":["SJAG_01748","SJAG_01013","SJAG_03453","SJAG_01349","SJAG_05979","SJAG_03905"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86888,86889,86736,86733,86734,86735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"}]},"cv_name":"mondo","definition":"A clonal hematopoietic stem cell disorder, characterized by proliferation in the bone marrow of one or more of the myeloid (i.e., granulocytic, erythroid, megakaryocytic, and mast cell) lineages. It is primarily a neoplasm of adults. (WHO 2008)","definition_xrefs":["NCIT:C4345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid neoplasm","termid":"MONDO:0005170"},{"relation_name":"is_a","term_name":"myeloid hemopathy","termid":"MONDO:0015756"},{"relation_name":"is_a","term_name":"bone marrow cancer","termid":"MONDO:0021138"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"myeloproliferative neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:98274","SCTID:425333006","UMLS:C1292778","GARD:9319","DOID:2226","ICDO:9975/1","MEDGEN:220955","ONCOTREE:MPN","ICDO:9960/3","ICD9:238.79","EFO:0002428","MedDRA:10028576"],"synonyms":[{"name":"CMPD","type":"exact"},{"name":"CMPD, U","type":"related"},{"name":"MPD","type":"exact"},{"name":"MPN","type":"exact"},{"name":"chronic myeloproliferative disease","type":"exact"},{"name":"chronic myeloproliferative disorder","type":"exact"},{"name":"chronic myeloproliferative disorders","type":"related"},{"name":"chronic myeloproliferative neoplasm","type":"exact"},{"name":"myeloproliferative disorder","type":"exact"},{"name":"myeloproliferative neoplasm","type":"exact"},{"name":"myeloproliferative neoplasm, chronic","type":"exact"},{"name":"myeloproliferative neoplasms","type":"related"},{"name":"myeloproliferative tumor","type":"exact"},{"name":"myeloproliferative tumour","type":"exact"}],"termid":"MONDO:0020076","terms_by_termid":{"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0020076"}}}


id: PBO:0086732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant displays elongated buds and a large fraction of budded cells have only one nucleus","termid":"PBO:0086732"}


id: PBO:0005701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucosidase Adg3 (predicted)","termid":"PBO:0005701"}


id: PBO:0082846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding protein of mitochondrial inner membrane; required for cytochrome c oxidase activity and respiration; may function to deliver copper to cytochrome c oxidase; similar to thioredoxins; SCO1 has a paralog, SCO2, that arose from the whole genome duplication","termid":"PBO:0082846"}


id: MONDO:0015847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare vaginal malformation (obsolete MONDO:0015847)","secondary_identifiers":["Orphanet:180151"],"termid":"MONDO:0015847","xrefs":{"Monarch":{"xref_id":"0015847"}}}


id: GO:1903662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-altrarate.","definition_xrefs":["GO_REF:0000068","PMID:17649980","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"L-altrarate metabolic process","synonyms":[{"name":"L-altrarate(1-) metabolism","type":"exact"}],"termid":"GO:1903662"}


id: GO:0015313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + fluconazole(in) = H+(in) + fluconazole(out).","definition_xrefs":["TC:2.A.1.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluconazole transmembrane transporter activity","termid":"GO:0015244"},{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"fluconazole:proton antiporter activity","synonyms":[{"name":"fluconazole:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015313"}


id: GO:0033931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-alpha-D-galactosaminidic linkages in poly(D-galactosamine).","definition_xrefs":["EC:3.2.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"endogalactosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.109-RXN"],"synonyms":[{"name":"galactosaminoglycan glycanohydrolase activity","type":"related"}],"termid":"GO:0033931"}


id: PBO:0064131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase inhibitor gamma","termid":"PBO:0064131"}


id: PBO:0091013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic/meiotic cohesin complex ATPase subunit Psm3/Smc3","termid":"PBO:0091013"}


id: GO:1905547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:BHF_telomere","GOC:nc","GOC:TermGenie","PMID:25819580"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of subtelomeric heterochromatin assembly (obsolete GO:1905547)","synonyms":[{"name":"regulation of telomeric heterochromatin assembly","type":"related"},{"name":"regulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905547"}


id: PBO:0000650
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RPC19","termid":"PBO:0000650"}


id: GO:0005436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + phosphate(out) = Na+(in) + phosphate(in).","definition_xrefs":["TC:2.A.1.14.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sodium:phosphate symporter activity","secondary_identifiers":["Reactome:R-HSA-2872498","Reactome:R-HSA-5687585","Reactome:R-HSA-428609","Reactome:R-HSA-5651697","Reactome:R-HSA-427605","Reactome:R-HSA-5651685","Reactome:R-HSA-427656","Reactome:R-HSA-427645","Reactome:R-HSA-5625123","Reactome:R-HSA-5651971","GO:0015321"],"synonyms":[{"name":"sodium-dependent phosphate transmembrane transporter activity","type":"related"},{"name":"sodium/phosphate symporter activity","type":"exact"}],"termid":"GO:0005436"}


id: MONDO:0011357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eccrine syringofibroadenomatosis with eyelid abnormalities","secondary_identifiers":["MEDGEN:355022","OMIM:603669","UMLS:C1863618","MESH:C566347"],"synonyms":[{"name":"eccrine syringofibroadenomatosis with eyelid abnormalities","type":"exact"}],"termid":"MONDO:0011357","xrefs":{"Monarch":{"xref_id":"0011357"}}}


id: GO:0060634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of 4,6-pyruvylated galactose residue biosynthetic process, the chemical reactions and pathways resulting in the formation of the pyruvylated galactose residue 4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-(1->3)-. The galactose residue is part of a larger polysaccharide chain.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide biosynthetic process","termid":"GO:0032885"},{"relation_name":"regulates","term_name":"4,6-pyruvylated galactose residue biosynthetic process","termid":"GO:0051072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of 4,6-pyruvylated galactose residue biosynthetic process","termid":"GO:0060634"}


id: MONDO:0019651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic steroid-sensitive nephrotic syndrome","termid":"MONDO:0019067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic steroid-sensitive nephrotic syndrome with diffuse mesangial proliferation","secondary_identifiers":["Orphanet:93209"],"termid":"MONDO:0019651","xrefs":{"Monarch":{"xref_id":"0019651"}}}


id: GO:0046366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of allose, allo-hexose, an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete allose biosynthetic process (obsolete GO:0046366)","synonyms":[{"name":"allose anabolism","type":"exact"},{"name":"allose biosynthesis","type":"exact"},{"name":"allose formation","type":"exact"},{"name":"allose synthesis","type":"exact"}],"termid":"GO:0046366"}


id: R0:0009004
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"'has consumer' is a relation between a material entity and an organism in which the former can normally be digested or otherwise absorbed by the latter without immediate or persistent ill effect.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_consumer","termid":"R0:0009004"}


id: GO:1903111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GOC:bhm","GO_REF:0000058","GOC:TermGenie","PMID:24339919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"},{"relation_name":"is_a","term_name":"negative regulation of single strand break repair","termid":"GO:1903517"},{"relation_name":"negatively_regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of single-strand break repair via homologous recombination","synonyms":[{"name":"down regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"down-regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"downregulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"inhibition of single-strand break repair via homologous recombination","type":"narrow"}],"termid":"GO:1903111"}


id: MONDO:0013859
data:
  {"annotated_genes":["SJAG_00404"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85841],"is_not":false,"summary":null,"term":"MONDO:0013859"}]},"cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the AGK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 38","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110245","MEDGEN:766408","OMIM:614691","UMLS:C3553494"],"synonyms":[{"name":"AGK early-onset non-syndromic cataract","type":"exact"},{"name":"CATC5","type":"exact"},{"name":"CTRCT38","type":"exact"},{"name":"autosomal recessive congenital cataract 5","type":"exact"},{"name":"cataract 38","type":"exact"},{"name":"cataract 38, autosomal recessive","type":"exact"},{"name":"cataract type 38","type":"exact"},{"name":"cataract, autosomal recessive congenital 5","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in AGK","type":"exact"}],"termid":"MONDO:0013859","terms_by_termid":{"MONDO:0013859":null},"xrefs":{"Monarch":{"xref_id":"0013859"}}}


id: PBO:0072105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 3","termid":"PBO:0072105"}


id: PBO:0087112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated chaperone; zuotin functions in ribosome biogenesis and as a chaperone for nascent polypeptide chains in partnership with Ssz1p and SSb1/2; contains a DnaJ domain and functions as a J-protein partner for Ssb1p and Ssb2p; human gene DNAJC2 can partially complement yeast zuo1 null mutant","termid":"PBO:0087112"}


id: PBO:0057874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3180-3","termid":"PBO:0057874"}


id: PR:O13813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tom22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import receptor subunit tom22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.16","synonyms":[{"name":"Spom972h-tom22","type":"exact"},{"name":"mitochondrial 22 kDa outer membrane protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translocase of outer membrane 22 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13813"}


id: PBO:0084985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP+ dependent arabinose dehydrogenase; involved in carbohydrate metabolism; purified as homodimer; naturally occurs with a N-terminus degradation product","termid":"PBO:0084985"}


id: PBO:0040019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 8","termid":"PBO:0040019"}


id: PBO:0083515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF KIP3/YGL216W","termid":"PBO:0083515"}


id: GO:0042565
data:
  {"annotated_genes":["SJAG_01534"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96007],"is_not":false,"summary":null,"term":"GO:0042565"}]},"cv_name":"cellular_component","definition":"A complex which usually consists of three components, e.g. in Xenopus and yeast, the export receptor CRM1 (also known as exportin 1), the Ran protein and any RNA with a nuclear export sequence (NES). The complex acts to export RNA molecules with a NES from the nucleus through a nuclear pore.","definition_xrefs":["PMID:9323123","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport complex","termid":"GO:0031074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01534":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA nuclear export complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042565","terms_by_termid":{"GO:0042565":null}}


id: PBO:0055999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM1 homolog, mRNA degradation associated pseudogene 2","termid":"PBO:0055999"}


id: PBO:0029026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle","termid":"PBO:0029026"}


id: GO:0039711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a helical viral capsid in the cytoplasm. Occurs by assembling around the viral genome.","definition_xrefs":["VZ:1950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic capsid assembly","termid":"GO:0039709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic helical capsid assembly","termid":"GO:0039711"}


id: PBO:0081060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 18","termid":"PBO:0081060"}


id: GO:1901039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptide antigen transport.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"is_a","term_name":"regulation of peptide transport","termid":"GO:0090087"},{"relation_name":"regulates","term_name":"peptide antigen transport","termid":"GO:0046968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of peptide antigen transport","termid":"GO:1901039"}


id: GO:0052814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain fatty aldehyde + H2O + NAD+ = a medium chain fatty acid + 2 H+ + NADH.","definition_xrefs":["RHEA:69763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty aldehyde dehydrogenase (NAD+) activity","termid":"GO:0102673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"medium-chain fatty aldehyde dehydrogenase (NAD+) activity","synonyms":[{"name":"medium-chain aliphatic aldehyde dehydrogenase activity","type":"related"},{"name":"medium-chain fatty aldehyde dehydrogenase activity","type":"related"},{"name":"medium-chain-aldehyde dehydrogenase activity","type":"exact"},{"name":"medium-chain-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0052814"}


id: MONDO:0008992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juberg-Hayward syndrome is a polymalformative syndrome that associates multiple skeletal anomalies with microcephaly, facial dysmorphism, urogenital anomalies and intellectual deficit.","definition_xrefs":["Orphanet:2319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Juberg-Hayward syndrome","secondary_identifiers":["OMIM:216100","MEDGEN:162906","SCTID:721874001","icd11.foundation:395922030","GARD:3060","UMLS:C0796099","MESH:C537690","NORD:1531"],"synonyms":[{"name":"JHS","type":"related"},{"name":"Juberg-Hayward syndrome","type":"exact"},{"name":"Orocraniodigital Syndrome","type":"exact"},{"name":"Orocraniodigital syndrome","type":"exact"},{"name":"cleft LIP/palate with abnormal thumbs and microcephaly","type":"related"},{"name":"cleft lip/palate-abnormal thumbs-microcephaly syndrome","type":"exact"}],"termid":"MONDO:0008992","xrefs":{"Monarch":{"xref_id":"0008992"}}}


id: GO:0030507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0008092","GO:0003674"],"is_obsolete":false,"name":"spectrin binding","termid":"GO:0030507"}


id: PATO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male receptivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male receptivity","termid":"PATO:0001721"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased male receptivity","synonyms":[{"name":"low male receptivity","type":"exact"}],"termid":"PATO:0001726"}


id: PBO:0040706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 12","termid":"PBO:0040706"}


id: GO:0030687
data:
  {"annotated_genes":["SJAG_04395","SJAG_04992","SJAG_00689","SJAG_04492","SJAG_02830","SJAG_04346","SJAG_00311","SJAG_01606","SJAG_00271","SJAG_02759","SJAG_03719","SJAG_03697","SJAG_04330","SJAG_01811","SJAG_02436","SJAG_00882","SJAG_03413","SJAG_04491","SJAG_03466","SJAG_02644","SJAG_01839","SJAG_00722","SJAG_01275","SJAG_02427","SJAG_01454","SJAG_01494"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89137,90332,91603,92311,92404,92712,94339,97468,97474,98680,98960,99894,102007,102992,105467,107413,110259,111729,115672,116093,116730,118332],"is_not":false,"summary":null,"term":"GO:0030687"},{"annotations":[91513,97378,87448],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[91514,111879,87449],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030691"}]},"cv_name":"cellular_component","definition":"A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00271":null,"SJAG_00311":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_01275":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02644":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_03413":null,"SJAG_03466":null,"SJAG_03697":null,"SJAG_03719":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04491":null,"SJAG_04492":null,"SJAG_04992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0030684"}],"interesting_parent_ids":["GO:0032991","GO:0030684","GO:0005575"],"is_obsolete":false,"name":"preribosome, large subunit precursor","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"66S preribosome","type":"narrow"}],"termid":"GO:0030687","terms_by_termid":{"GO:0030687":null,"GO:0030690":null,"GO:0030691":null}}


id: PBO:0088791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase (human ERCC2) subunit Rad15","termid":"PBO:0088791"}


id: GO:0004821
data:
  {"annotated_genes":["SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107834],"is_not":false,"summary":null,"term":"GO:0004821"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His).","definition_xrefs":["EC:6.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0140098","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"histidine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-379844","RHEA:17313","Reactome:R-HSA-380234","MetaCyc:HISTIDINE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"L-histidine:tRNAHis ligase (AMP-forming)","type":"related"},{"name":"histidine translase activity","type":"related"},{"name":"histidyl-tRNA synthetase activity","type":"exact"},{"name":"histidyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004821","terms_by_termid":{"GO:0004821":null}}


id: PBO:0051156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-36 (pseudogene)","termid":"PBO:0051156"}


id: PBO:0061487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurogranin","termid":"PBO:0061487"}


id: PBO:0050112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 22","termid":"PBO:0050112"}


id: GO:0044132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of a symbiont from an initial condition to a later condition, within the cells or tissues of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont on or near host (obsolete GO:0044132)","termid":"GO:0044132"}


id: MONDO:1010986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in tiger.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, tiger","secondary_identifiers":["OMIA:000487-9694"],"termid":"MONDO:1010986","xrefs":{"Monarch":{"xref_id":"1010986"}}}


id: GO:0033477
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033528"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving S-methyl-methionine (SMM). SMM can be converted to methionine by donating a methyl group to homocysteine, and concurrent operation of this reaction and that mediated by MMT sets up the SMM cycle.","definition_xrefs":["GOC:mah","PMID:12692340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"S-methylmethionine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"S-methylmethionine metabolism","type":"exact"}],"termid":"GO:0033477","terms_by_termid":{"GO:0033528":null}}


id: MONDO:0019460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute leukemia in which the blasts lack sufficient evidence to classify as myeloid or lymphoid or they have morphologic and/or immunophenotypic characteristics of both myeloid and lymphoid cells. (WHO, 2001)","definition_xrefs":["NCIT:C7464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute leukemia of ambiguous lineage","secondary_identifiers":["UMLS:C1301357","Orphanet:86851","MedDRA:10067399","NANDO:2200017","GARD:8638","SCTID:721308005","icd11.foundation:1062906118","MEDGEN:226983","NANDO:2200018"],"synonyms":[{"name":"ALL with myeloid markers","type":"related"},{"name":"AML with lymphoid markers","type":"related"},{"name":"BAL","type":"related"},{"name":"acute leukaemia of indeterminate lineage","type":"exact"},{"name":"acute leukaemia of undetermined lineage","type":"related"},{"name":"acute leukemia of ambiguous lineage","type":"exact"},{"name":"acute leukemia of indeterminate lineage","type":"exact"},{"name":"acute leukemia of undetermined lineage","type":"related"},{"name":"biphenotypic acute leukaemia","type":"related"},{"name":"biphenotypic acute leukemia","type":"related"},{"name":"hybrid acute leukaemia","type":"exact"},{"name":"hybrid acute leukemia","type":"exact"},{"name":"mixed lineage acute leukaemia","type":"exact"},{"name":"mixed lineage acute leukemia","type":"exact"},{"name":"mixed phenotype acute leukaemia","type":"related"},{"name":"mixed phenotype acute leukemia","type":"related"}],"termid":"MONDO:0019460","xrefs":{"Monarch":{"xref_id":"0019460"}}}


id: MOD:01163
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an amino acid residue and 5'-phosphoguanosine through either a phosphodiester or a phosphoramide bond.","definition_xrefs":["DeltaMass:304","Unimod:413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylated residue","synonyms":[{"name":"5'phos Guanosyl","type":"exact"},{"name":"Phosphoguanosine","type":"related"},{"name":"phospho-guanosine","type":"related"}],"termid":"MOD:01163"}


id: MOD:01133
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-12-hydroxyfarnesyl-L-cysteine methyl ester.","definition_xrefs":["RESID:AA0103#var","PubMed:17790543","RESID:AA0105#var"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"S-12-hydroxyfarnesyl-L-cysteine","termid":"MOD:00112"},{"relation_name":"has_functional_parent","term_name":"L-cysteine methyl ester","termid":"MOD:00114"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-12-hydroxyfarnesyl-L-cysteine methyl ester","synonyms":[{"name":"S12HyFarnOMeCys","type":"exact"}],"termid":"MOD:01133"}


id: PBO:0031614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuolar_transport_during_vegetative_growth","termid":"PBO:0031614"}


id: GO:0045723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of fatty acid biosynthetic process","synonyms":[{"name":"activation of fatty acid biosynthetic process","type":"narrow"},{"name":"positive regulation of fatty acid anabolism","type":"exact"},{"name":"positive regulation of fatty acid biosynthesis","type":"exact"},{"name":"positive regulation of fatty acid formation","type":"exact"},{"name":"positive regulation of fatty acid synthesis","type":"exact"},{"name":"stimulation of fatty acid biosynthetic process","type":"narrow"},{"name":"up regulation of fatty acid biosynthetic process","type":"exact"},{"name":"up-regulation of fatty acid biosynthetic process","type":"exact"},{"name":"upregulation of fatty acid biosynthetic process","type":"exact"}],"termid":"GO:0045723"}


id: GO:0032592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mitochondrial membrane (obsolete GO:0032592)","synonyms":[{"name":"integral to mitochondrial membrane","type":"narrow"}],"termid":"GO:0032592"}


id: PATO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000723 high yield (obsolete PATO:0000723)","termid":"PATO:0000723"}


id: FYPO:0003569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of a spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the cytoplasm. An open fenestra remains present in the nuclear envelope.","definition_xrefs":["PomBase:mah","PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in cytoplasm","synonyms":[{"name":"SPB unanchored to nuclear envelope","type":"related"},{"name":"abnormal establishment of mitotic spindle pole body localization to nuclear envelope, with spindle pole body in cytoplasm","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope, with spindle pole body in cytoplasm","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in cytoplasm, during vegetative growth","type":"exact"},{"name":"spindle pole body in cytoplasm, unanchored to nuclear envelope","type":"related"},{"name":"spindle pole body unanchored to nuclear envelope","type":"related"},{"name":"unanchored spindle pole bodies","type":"related"}],"termid":"FYPO:0003569"}


id: PBO:0054304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1696","termid":"PBO:0054304"}


id: PBO:0038872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aarF domain containing kinase 5","termid":"PBO:0038872"}


id: PBO:0066284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member H, pseudogene","termid":"PBO:0066284"}


id: MONDO:0000984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited blood disorder characterized by a decreased synthesis of one of the polypeptide chains that form hemoglobin. Anemia results from this abnormal hemoglobin formation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thalassemia","secondary_identifiers":["MESH:D013789","UMLS:C0039730","NANDO:2200626","NCIT:C35069","DOID:10241","ICD10CM:D56","SCTID:40108008","ICD9:282.40","ICD9:282.49","GARD:7756","EFO:1001996","ICD9:282.4","MEDGEN:21121"],"synonyms":[{"name":"sickle-cell thalassemia with crisis","type":"exact"},{"name":"sickle-cell thalassemia without crisis","type":"exact"},{"name":"thalassemia Hb-S disease with crisis","type":"exact"},{"name":"thalassemia Hb-S disease without crisis","type":"exact"}],"termid":"MONDO:0000984","xrefs":{"Monarch":{"xref_id":"0000984"}}}


id: GO:0061683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the seminal vesicle is generated and organized. A branch is a division or offshoot from a main stem.","definition_xrefs":["PMID:16916376","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"seminal vesicle epithelium development","termid":"GO:0061108"},{"relation_name":"part_of","term_name":"seminal vesicle morphogenesis","termid":"GO:0061682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in seminal vesicle morphogenesis","synonyms":[{"name":"gonecyst branching morphogenesis","type":"exact"},{"name":"seminal gland branching morphogenesis","type":"exact"},{"name":"seminal vesicle branching","type":"exact"},{"name":"seminal vesicle branching morphogenesis","type":"exact"}],"termid":"GO:0061683"}


id: PBO:0088863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Mgr2","termid":"PBO:0088863"}


id: FYPO:0006317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during the second meiotic nuclear division.","definition_xrefs":["PMID:29259000","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000054","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during meiosis II","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during meiosis II","type":"exact"},{"name":"decreased protein localization to meiotic SPB during meiosis II","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during meiosis II","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during meiosis II","type":"exact"}],"termid":"FYPO:0006317"}


id: PBO:0067807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 109","termid":"PBO:0067807"}


id: GO:0070910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways that result in the breakdown of macromolecules that form part of a cell wall, and contributes to the breakdown of the cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall macromolecule catabolic process","termid":"GO:0016998"},{"relation_name":"part_of","term_name":"cell wall disassembly","termid":"GO:0044277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall macromolecule catabolic process involved in cell wall disassembly","termid":"GO:0070910"}


id: PBO:0035925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035925"}


id: PR:Q9P799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP35G2.04c gene.","definition_xrefs":["UniProtKB:Q9P799","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P35G2.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.04c","synonyms":[{"name":"Spom972h-SPBP35G2.04c","type":"exact"}],"termid":"PR:Q9P799"}


id: PBO:0054804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2217","termid":"PBO:0054804"}


id: PBO:0078208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-1 (non-functional)","termid":"PBO:0078208"}


id: PBO:0067621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 793, pseudogene","termid":"PBO:0067621"}


id: PBO:0091889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter","termid":"PBO:0091889"}


id: PBO:0077372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM109 divergent transcript","termid":"PBO:0077372"}


id: MONDO:0017338
data:
  {"annotated_genes":["SJAG_03222","SJAG_01147","SJAG_02306","SJAG_04016","SJAG_02397","SJAG_03701","SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011582"},{"annotations":[85201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013675"},{"annotations":[85552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014132"},{"annotations":[84820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014611"},{"annotations":[84887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033282"},{"annotations":[85530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054785"},{"annotations":[85875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957382"}]},"cv_name":"mondo","definition":"Multiple mitochondrial dysfunctions syndrome describes a group of rare inborn errors of energy metabolism due to defects in mitochondrial [4Fe-4S] protein assembly. Patients present with a neonatal/infancy onset of metabolic lactic acidosis (that may be associated with hyperglycinemia and other abnormal metabolic testing results), muscular hypotonia, absence of psychomotor development or developmental regression, as well as abnormal neuroimaging findings (including leukodystrophy, brain developmental defects, white matter abnormalities, cerebral atrophy), and other variable clinical features (e.g., optic atrophy, cardiomyopathy, pulmonary hypertension, seizures, and dysmorphic features). Early fatal outcome is usual.","definition_xrefs":["Orphanet:289573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipoic acid biosynthesis defect","termid":"MONDO:0018424"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01147":null,"SJAG_02306":null,"SJAG_02397":null,"SJAG_03222":null,"SJAG_03641":null,"SJAG_03701":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0004069"],"is_obsolete":false,"name":"fatal multiple mitochondrial dysfunctions syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565304","GARD:12632","MEDGEN:502474","OMIMPS:605711","SCTID:720827002","UMLS:C3502075","DOID:0070330"],"synonyms":[{"name":"MMDS","type":"related"},{"name":"fatal multiple mitochondrial dysfunction syndrome","type":"related"},{"name":"multiple mitochondrial dysfunctions syndrome","type":"exact"}],"termid":"MONDO:0017338","terms_by_termid":{"MONDO:0011582":null,"MONDO:0013675":null,"MONDO:0014132":null,"MONDO:0014611":null,"MONDO:0033282":null,"MONDO:0054785":null,"MONDO:0957382":null},"xrefs":{"Monarch":{"xref_id":"0017338"}}}


id: PBO:0075805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 4, pseudogene","termid":"PBO:0075805"}


id: GO:0043995
data:
  {"annotated_genes":["SJAG_00676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87946],"is_not":false,"summary":null,"term":"GO:0043995"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 5) = CoA + histone H4 N6-acetyl-L-lysine (position 5).","definition_xrefs":["PMID:19056256","PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0034212","GO:0016746","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histone H4K5 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone acetylase activity (H4-K5 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K5 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H4-K5 specific)","type":"exact"}],"termid":"GO:0043995","terms_by_termid":{"GO:0043995":null}}


id: PBO:0054905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2319","termid":"PBO:0054905"}


id: PBO:0067809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 111","termid":"PBO:0067809"}


id: FYPO:0004069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II does not occur.","definition_xrefs":["PomBase:mah","GO:0071619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished phosphorylation of RNA polymerase II C-terminal domain serine 2 residues","synonyms":[{"name":"abolished phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"abolished phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","type":"exact"},{"name":"abolished phosphorylation of RNA polymerase II CTD serine 2 residues","type":"exact"},{"name":"phosphorylation of RNA polymerase II C-terminal domain serine 2 residues abolished","type":"exact"}],"termid":"FYPO:0004069"}


id: GO:0023024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class I major histocompatibility complex.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex binding","termid":"GO:0023023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class I protein complex binding","termid":"GO:0023024"}


id: PBO:0038789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase domain containing 1","termid":"PBO:0038789"}


id: PBO:0069694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 973, pseudogene","termid":"PBO:0069694"}


id: PBO:0042992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 5","termid":"PBO:0042992"}


id: PBO:0072742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7","termid":"PBO:0072742"}


id: PBO:0056356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP9 antisense RNA 1","termid":"PBO:0056356"}


id: GO:1900887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pentadecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentadecane metabolic process","termid":"GO:1900890"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"pentadecane biosynthetic process","termid":"GO:1900634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pentadecane biosynthetic process","synonyms":[{"name":"regulation of pentadecane anabolism","type":"exact"},{"name":"regulation of pentadecane biosynthesis","type":"exact"},{"name":"regulation of pentadecane formation","type":"exact"},{"name":"regulation of pentadecane synthesis","type":"exact"}],"termid":"GO:1900887"}


id: PBO:0061931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 1","termid":"PBO:0061931"}


id: PBO:0055313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2741","termid":"PBO:0055313"}


id: MONDO:0013805
data:
  {"annotated_genes":["SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85981],"is_not":false,"summary":null,"term":"MONDO:0013805"}]},"cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the DYNC1H1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"},{"relation_name":"is_a","term_name":"dyneinopathy","termid":"MONDO:1040031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3281202","GARD:16462","OMIM:614563","DOID:0070043","MEDGEN:482832"],"synonyms":[{"name":"DYNC1H1 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD13","type":"exact"},{"name":"autosomal dominant intellectual disability 13","type":"exact"},{"name":"autosomal dominant mental retardation 13","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 13","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in DYNC1H1","type":"exact"},{"name":"intellectual disability, autosomal dominant 13","type":"exact"},{"name":"intellectual disability, autosomal dominant 13, with neuronal migration defects","type":"exact"},{"name":"intellectual disability, autosomal dominant type 13","type":"exact"},{"name":"intellectual disability, autosomal dominant, 13, with neuronal migration defects","type":"related"},{"name":"mental retardation, autosomal dominant 13","type":"related"},{"name":"mental retardation, autosomal dominant 13, with neuronal migration defects","type":"exact"},{"name":"mental retardation, autosomal dominant type 13","type":"exact"},{"name":"mental retardation, autosomal dominant, 13, with neuronal migration defects","type":"related"}],"termid":"MONDO:0013805","terms_by_termid":{"MONDO:0013805":null},"xrefs":{"Monarch":{"xref_id":"0013805"}}}


id: MONDO:0023137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feigenbaum Bergeron syndrome","termid":"MONDO:0023137","xrefs":{"Monarch":{"xref_id":"0023137"}}}


id: GO:0140934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A deubiquitinase that cleaves ubiquitin from a histone protein to which it is conjugated.","definition_xrefs":["PMID:18206972","PMID:18226187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone deubiquitinase activity","synonyms":[{"name":"histone deubiquitination","type":"related"}],"termid":"GO:0140934"}


id: PBO:0045609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 20 (pseudogene)","termid":"PBO:0045609"}


id: PBO:0076334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYT2 antisense RNA 1","termid":"PBO:0076334"}


id: PBO:0044496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle regulator of NHEJ","termid":"PBO:0044496"}


id: FYPO:0002164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms an actomyosin contractile ring in an abnormal location, and the ring has a curved, or C-shaped, profile. The normal location is at the midpoint of, and perpendicular to, the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring displaced from midpoint","termid":"FYPO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000138","FYPO:0004803","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"mislocalized, curved actomyosin contractile ring","synonyms":[{"name":"actomyosin contractile ring displaced from midpoint and bent","type":"related"},{"name":"actomyosin contractile ring displaced from midpoint and curved","type":"exact"},{"name":"contractile ring displaced from cell centre and curved","type":"exact"},{"name":"mislocalised, curved actomyosin contractile ring","type":"exact"},{"name":"mislocalized, curved actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"mislocalized, curved actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"mislocalized, curved cytokinetic contractile ring","type":"exact"},{"name":"mislocalized, curved mitotic contractile ring","type":"exact"}],"termid":"FYPO:0002164"}


id: FYPO:0002839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromosome during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromosome during vegetative growth","type":"exact"}],"termid":"FYPO:0002839"}


id: PBO:0073827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 5 pseudogene 1","termid":"PBO:0073827"}


id: PBO:0079125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teashirt zinc finger homeobox 1","termid":"PBO:0079125"}


id: PBO:0035792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_deacetylation_during_vegetative_growth","termid":"PBO:0035792"}


id: PBO:0061963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 42","termid":"PBO:0061963"}


id: GO:0002692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of cellular extravasation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"negatively_regulates","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular extravasation","synonyms":[{"name":"down regulation of cellular extravasation","type":"exact"},{"name":"down-regulation of cellular extravasation","type":"exact"},{"name":"downregulation of cellular extravasation","type":"exact"},{"name":"inhibition of cellular extravasation","type":"narrow"}],"termid":"GO:0002692"}


id: GO:0046831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"regulates","term_name":"RNA export from nucleus","termid":"GO:0006405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"regulation of RNA export from nucleus","synonyms":[{"name":"regulation of RNA export from cell nucleus","type":"exact"},{"name":"regulation of RNA export out of nucleus","type":"exact"},{"name":"regulation of RNA transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of RNA-nucleus export","type":"exact"}],"termid":"GO:0046831"}


id: MONDO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm morphologically characterized by the presence of a villous architectural pattern. Most often it occurs in the large intestine, small intestine, and the stomach in which the neoplastic epithelial cells show dysplastic features. It may also arise in the urinary bladder, urethra, and vagina.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"villous adenoma","secondary_identifiers":["NCIT:C7399","ICDO:8261/0","MESH:D018253","DOID:0050869","MEDGEN:60206","UMLS:C0206674"],"synonyms":[{"name":"villous adenoma","type":"exact"}],"termid":"MONDO:0000502","xrefs":{"Monarch":{"xref_id":"0000502"}}}


id: FYPO:0004650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule in the mitotic spindle, occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule depolymerization during vegetative growth","termid":"FYPO:0005682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule depolymerization","synonyms":[{"name":"decreased mitotic spindle microtubule catastrophe","type":"related"},{"name":"decreased mitotic spindle microtubule depolymerisation","type":"exact"},{"name":"decreased mitotic spindle microtubule depolymerization during vegetative growth","type":"exact"},{"name":"decreased mitotic spindle microtubule shrinkage","type":"related"},{"name":"decreased spindle microtubule depolymerization during mitotic cell cycle","type":"exact"},{"name":"reduced mitotic spindle microtubule depolymerization","type":"exact"}],"termid":"FYPO:0004650"}


id: GO:0047870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-dimethylallyladenine + S-adenosyl-L-methionine(1+) = S-methyl-5'-thioadenosine + discadenine + H+.","definition_xrefs":["EC:2.5.1.24","RHEA:19581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"discadenine synthase activity","secondary_identifiers":["KEGG_REACTION:R03726","MetaCyc:DISCADENINE-SYNTHASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:6-N-(Delta2-isopentenyl)-adenine 3-(3-amino-3-carboxypropyl)-transferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:N6-(Delta2-isopentenyl)-adenine 3-(3-amino-3-carboxypropyl)-transferas","type":"related"},{"name":"discadenine synthetase activity","type":"related"}],"termid":"GO:0047870"}


id: PBO:0028997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_amino_acid_import_during_vegetative_growth","termid":"PBO:0028997"}


id: GO:0005484
data:
  {"annotated_genes":["SJAG_00899","SJAG_00826","SJAG_02204","SJAG_03536","SJAG_02586","SJAG_03347","SJAG_02103","SJAG_03552","SJAG_02241","SJAG_04513","SJAG_00171","SJAG_00557","SJAG_04978","SJAG_01324","SJAG_03848","SJAG_04701","SJAG_00804","SJAG_04739","SJAG_04023"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90086,93145,93397,95803,97600,99016,99401,99709,100575,102623,106855,107494,108147,109119,109272,112129,116996,117974,118062],"is_not":false,"summary":null,"term":"GO:0005484"}]},"cv_name":"molecular_function","definition":"Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion.","definition_xrefs":["GOC:mah","PMID:14570579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00557":null,"SJAG_00804":null,"SJAG_00826":null,"SJAG_00899":null,"SJAG_01324":null,"SJAG_02103":null,"SJAG_02204":null,"SJAG_02241":null,"SJAG_02586":null,"SJAG_03347":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04701":null,"SJAG_04739":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"SNAP receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005485","GO:0005486"],"synonyms":[{"name":"Q-SNARE activity","type":"narrow"},{"name":"R-SNARE activity","type":"narrow"},{"name":"SNAP-25","type":"narrow"},{"name":"SNARE","type":"exact"},{"name":"t-SNARE activity","type":"narrow"},{"name":"v-SNARE activity","type":"narrow"}],"termid":"GO:0005484","terms_by_termid":{"GO:0005484":null}}


id: PBO:0065859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB17, member RAS oncogene family","termid":"PBO:0065859"}


id: PBO:0002916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VanZ-like family protein","termid":"PBO:0002916"}


id: PBO:0026671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_microtubule_plus-end_directed_mitotic_chromosome_migration","termid":"PBO:0026671"}


id: GO:1901726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone deacetylase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rl","PMID:20497126"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylase activity (obsolete GO:1901726)","synonyms":[{"name":"down regulation of histone deacetylase activity","type":"exact"},{"name":"down-regulation of histone deacetylase activity","type":"exact"},{"name":"downregulation of histone deacetylase activity","type":"exact"},{"name":"inhibition of histone deacetylase activity","type":"narrow"}],"termid":"GO:1901726"}


id: MONDO:0700006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characteristic in which the disease has a known cause.","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic vs non-idiopathic","termid":"MONDO:0700004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-idiopathic","termid":"MONDO:0700006","xrefs":{"Monarch":{"xref_id":"0700006"}}}


id: GO:0019649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways in which formaldehyde is processed and used as a carbon source for the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde assimilation","termid":"GO:0019649"}


id: GO:0044480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of blood mast cell degranulation in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:21549739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of mast cell degranulation in another organism","termid":"GO:0044479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of mast cell degranulation in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0044480"}


id: GO:0036479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of peroxidase.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234","GO:0004857","GO:0140678"],"is_obsolete":false,"name":"peroxidase inhibitor activity","termid":"GO:0036479"}


id: MONDO:1011990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dysplasia and persistent primary vitreous, non-human animal","secondary_identifiers":["OMIA:001420"],"termid":"MONDO:1011990","xrefs":{"Monarch":{"xref_id":"1011990"}}}


id: PBO:0090733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase regulatory factor Ctr1","termid":"PBO:0090733"}


id: MONDO:0004865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute transudative otitis media involving thick, viscid and mucuslike fluid effusion due to which the drum appears blue in color.","definition_xrefs":["DOID:9736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute transudative otitis media","termid":"MONDO:0002738"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue drum syndrome","secondary_identifiers":["ICD9:381.02","MEDGEN:583099","SCTID:52353000","UMLS:C0395863"],"synonyms":[{"name":"acute mucoid otitis media","type":"exact"},{"name":"acute non-suppurative otitis media - mucoid","type":"related"},{"name":"blue drum syndrome","type":"exact"}],"termid":"MONDO:0004865","xrefs":{"Monarch":{"xref_id":"0004865"}}}


id: GO:1990577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a methyl group from the C-terminal amino acid of a protein.","definition_xrefs":["PMID:11060018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein demethylation","termid":"GO:0006482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein demethylation","termid":"GO:1990577"}


id: GO:0019820
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P2 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content; they are the least dense of the subforms observed.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005777","GO:0005737"],"is_obsolete":false,"name":"P2 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019820"}


id: PBO:0051178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-66","termid":"PBO:0051178"}


id: GO:0019345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cysteine, via the intermediate S-sulfo-L-cysteine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine biosynthetic process","termid":"GO:0019344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cysteine biosynthetic process via S-sulfo-L-cysteine","synonyms":[{"name":"cysteine anabolism via S-sulfo-L-cysteine","type":"exact"},{"name":"cysteine biosynthesis via S-sulpho-L-cysteine","type":"exact"},{"name":"cysteine biosynthetic process via S-sulpho-L-cysteine","type":"exact"},{"name":"cysteine formation via S-sulfo-L-cysteine","type":"exact"},{"name":"cysteine synthesis via S-sulfo-L-cysteine","type":"exact"}],"termid":"GO:0019345"}


id: GO:0006041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucosamine metabolic process","synonyms":[{"name":"chitosamine metabolic process","type":"exact"},{"name":"chitosamine metabolism","type":"exact"},{"name":"glucosamine metabolism","type":"exact"}],"termid":"GO:0006041"}


id: MONDO:0001103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection of the small intestine caused by the flagellated protozoan giardia lamblia. It is spread via contaminated food and water and by direct person-to-person contact.","definition_xrefs":["MESH:D005873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"giardiasis","secondary_identifiers":["SCTID:10679007","icd11.foundation:433310499","MEDGEN:42213","ICD9:007.1","UMLS:C0017536","DOID:10718"],"synonyms":[{"name":"Giardia","type":"related"},{"name":"Giardia infection","type":"exact"},{"name":"Giardiases","type":"related"},{"name":"Lambliases","type":"related"},{"name":"beaver feaver","type":"exact"},{"name":"infection by Giardia lamblia","type":"exact"},{"name":"infections, Giardia","type":"related"},{"name":"lambliasis","type":"related"}],"termid":"MONDO:0001103","xrefs":{"Monarch":{"xref_id":"0001103"}}}


id: PBO:0034030
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session_accepted_date","termid":"PBO:0034030"}


id: MONDO:0010123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An exceedingly rare, autosomal recessive immune disease characterized by thumb aplasia, short stature with skeletal abnormalities, and combined immunodeficiency described in three sibships from two possibly related families. The skeletal abnormalities included unfused olecranon and the immunodeficiency manifested with severe chickenpox and chronic candidiasis. No new cases have been reported since 1978.","definition_xrefs":["Orphanet:2951"],"gene_count":0,"genotype_count":0,"name":"obsolete absent thumb-short stature-immunodeficiency syndrome (obsolete MONDO:0010123)","secondary_identifiers":["OMIM:274190","MESH:C564770"],"synonyms":[{"name":"thumb agenesis, short stature, and immunodeficiency","type":"related"}],"termid":"MONDO:0010123","xrefs":{"Monarch":{"xref_id":"0010123"}}}


id: GO:0090409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonate + ATP + coenzyme A = malonyl-CoA + AMP + diphosphate.","definition_xrefs":["RHEA:32139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"malonyl-CoA synthetase activity","secondary_identifiers":["EC:6.2.1.76","MetaCyc:RXN-12359"],"termid":"GO:0090409"}


id: GO:0022019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of dorsal lateral ganglionic eminence cells, resulting in the expansion of the cell population.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"},{"relation_name":"part_of","term_name":"lateral ganglionic eminence cell proliferation","termid":"GO:0022018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal lateral ganglionic eminence cell proliferation","termid":"GO:0022019"}


id: PATO:0000456
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000456 abstract (obsolete PATO:0000456)","termid":"PATO:0000456"}


id: PBO:0016067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractile ring myosin V regulator Rng8","termid":"PBO:0016067"}


id: GO:0043936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a cellular spore derived from the products of mitosis. A cellular spore is a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and desiccation resistance, and/or for reproduction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"},{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asexual sporulation resulting in formation of a cellular spore","synonyms":[{"name":"asexual reproduction resulting in the formation of a cellular spore","type":"exact"},{"name":"asexual sporulation resulting in the formation of a viable spore","type":"broad"}],"termid":"GO:0043936"}


id: PATO:0001333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which ends later than the natural end time.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"offset quality","termid":"PATO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporally extended","termid":"PATO:0001333"}


id: MONDO:0017702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycerol kinase deficiency (obsolete MONDO:0017702)","termid":"MONDO:0017702","xrefs":{"Monarch":{"xref_id":"0017702"}}}


id: GO:0009233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the menaquinones, quinone-derived compounds synthesized by intestinal bacteria. Structurally, menaquinones consist of a methylated naphthoquinone ring structure and side chains composed of a variable number of unsaturated isoprenoid residues. Menaquinones have vitamin K activity and are known as vitamin K2.","definition_xrefs":["GOC:jl","PMID:8642453","PMID:6127606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menaquinone metabolic process","synonyms":[{"name":"menaquinone metabolism","type":"exact"},{"name":"menatetrenone metabolic process","type":"exact"},{"name":"menatetrenone metabolism","type":"exact"},{"name":"multiprenylmenaquinone metabolic process","type":"exact"},{"name":"multiprenylmenaquinone metabolism","type":"exact"},{"name":"vitamin K2 metabolic process","type":"exact"},{"name":"vitamin K2 metabolism","type":"exact"}],"termid":"GO:0009233"}


id: GO:0008869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactonate = 2-dehydro-3-deoxy-D-galactonate + H2O.","definition_xrefs":["RHEA:18649","EC:4.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactonate dehydratase activity","secondary_identifiers":["MetaCyc:GALACTONDEHYDRAT-RXN","KEGG_REACTION:R03033"],"synonyms":[{"name":"D-galactonate dehydrase activity","type":"related"},{"name":"D-galactonate dehydratase activity","type":"related"},{"name":"D-galactonate hydro-lyase (2-dehydro-3-deoxy-D-galactonate-forming)","type":"related"},{"name":"D-galactonate hydro-lyase activity","type":"related"}],"termid":"GO:0008869"}


id: MONDO:0033364
data:
  {"annotated_genes":["SJAG_02913"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84962],"is_not":false,"summary":null,"term":"MONDO:0033364"}]},"cv_name":"mondo","definition":"A developmental and epileptic encephalopathy characterized by onset in the first weeks or months of life of refractory seizures, profoundly impaired intellectual development, absent speech, spastic quadriplegia, and dyskinetic movements that has material basis in homozygous or compound heterozygous mutation in the PIGP gene on chromosome 21q22.","definition_xrefs":["DOID:0080283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0024322","MONDO:0700092","MONDO:0002320","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 55","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4539843","MEDGEN:1622363","GARD:16241","OMIM:617599"],"synonyms":[{"name":"DEE55","type":"exact"},{"name":"EIEE55","type":"exact"},{"name":"developmental and epileptic encephalopathy 55","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 55","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 14","type":"related"},{"name":"infantile epileptic encephalopathy 55","type":"related"}],"termid":"MONDO:0033364","terms_by_termid":{"MONDO:0033364":null},"xrefs":{"Monarch":{"xref_id":"0033364"}}}


id: PBO:0027887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_monomethylation","termid":"PBO:0027887"}


id: GO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage between the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000483"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000474"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000484"}


id: GO:0070264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIE contains a specific subset of ribosomal proteins.","definition_xrefs":["PMID:19116144","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIIE complex","termid":"GO:0070264"}


id: GO:2001316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving kojic acid.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"kojic acid metabolic process","synonyms":[{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one metabolic process","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one metabolism","type":"exact"},{"name":"C6H6O4 metabolic process","type":"related"},{"name":"C6H6O4 metabolism","type":"related"},{"name":"kojic acid metabolism","type":"exact"}],"termid":"GO:2001316"}


id: PBO:0042559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 1","termid":"PBO:0042559"}


id: PBO:0083853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain both S1 and KH RNA binding domains; mutations in the human homolog, EXOSC3, cause pontocerebellar hypoplasia with motor neuron degeneration","termid":"PBO:0083853"}


id: GO:0042286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-4-amino-5-oxopentanoate = 5-aminolevulinate.","definition_xrefs":["RHEA:14265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutase activity","secondary_identifiers":["KEGG_REACTION:R02272","EC:5.4.3.8","MetaCyc:GSAAMINOTRANS-RXN"],"synonyms":[{"name":"(S)-4-amino-5-oxopentanoate 4,5-aminomutase activity","type":"related"},{"name":"glutamate-1-semialdehyde aminotransferase activity","type":"related"}],"termid":"GO:0042286"}


id: PBO:0031143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chromosome_loss_during_mitotic_chromosome_segregation","termid":"PBO:0031143"}


id: GO:0120232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in prenyl-FMNH2, an essential cofactor for the decarboxylase enzymes UbiD and Fdc1.","definition_xrefs":["PMID:26083754","PMID:25647642","GOC:krc","PMID:26083743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"},{"relation_name":"is_a","term_name":"flavin-containing compound biosynthetic process","termid":"GO:0042727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"prenyl-FMNH2 biosynthetic process","synonyms":[{"name":"prenyl-FMNH2 synthesis","type":"exact"},{"name":"prenylated FMNH2 anabolism","type":"exact"},{"name":"prenylated FMNH2 biosynthesis","type":"exact"},{"name":"prenylated FMNH2 biosynthetic process","type":"exact"},{"name":"prenylated FMNH2 formation","type":"exact"},{"name":"prenylated FMNH2 synthesis","type":"exact"},{"name":"prenyl-FMNH2 anabolism","type":"exact"},{"name":"prenyl-FMNH2 biosynthesis","type":"exact"},{"name":"prenyl-FMNH2 formation","type":"exact"}],"termid":"GO:0120232"}


id: GO:0032897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of viral transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral transcription","termid":"GO:0046782"},{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"negatively_regulates","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral transcription","synonyms":[{"name":"down regulation of viral transcription","type":"exact"},{"name":"down-regulation of viral transcription","type":"exact"},{"name":"downregulation of viral transcription","type":"exact"},{"name":"inhibition of viral transcription","type":"narrow"}],"termid":"GO:0032897"}


id: GO:0031257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding the trailing edge of a motile cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"cell trailing edge","termid":"GO:0031254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cell trailing edge membrane","synonyms":[{"name":"trailing edge membrane","type":"exact"}],"termid":"GO:0031257"}


id: PBO:0043120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine induced apoptosis inhibitor 1","termid":"PBO:0043120"}


id: PBO:0074198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 8","termid":"PBO:0074198"}


id: PBO:0017059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mug2/mug135/meu2 family, with repeat expansion","termid":"PBO:0017059"}


id: PBO:0026944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_centromere_clustering_resulting_in_centromere-spindle_pole_body_colocalization","termid":"PBO:0026944"}


id: PBO:0050166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 22","termid":"PBO:0050166"}


id: PBO:0116411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type ATPase, potassium exporting Cta3","termid":"PBO:0116411"}


id: PBO:0081163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger translocation associated","termid":"PBO:0081163"}


id: PBO:0002730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin Grx1","termid":"PBO:0002730"}


id: GO:0072392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"phenol metabolic process","termid":"GO:0072390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol catabolic process","termid":"GO:0072392"}


id: MONDO:0007277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract-aberrant oral frenula-growth delay syndrome is characterized by cataracts and short stature associated with variable anomalies, including aberrant oral frenula, a characteristic facial appearance (posteriorly angulated ears, upslanting palpebral fissures, small nose, ptosis and epicanthal folds) cavernous hemangiomas and hernias. It has been described in a mother and her two children. It is transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:1373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"cataract-aberrant oral frenula-growth delay syndrome","secondary_identifiers":["SCTID:715988005","GARD:5554","MEDGEN:350520","UMLS:C1861835","MESH:C536691","OMIM:115645"],"synonyms":[{"name":"Wellesley Carmen French syndrome","type":"related"},{"name":"Wellesley-Carman-French syndrome","type":"exact"},{"name":"cataract, aberrant oral frenula, and growth retardation","type":"related"},{"name":"cataracts, aberrant oral frenula, and growth retardation","type":"related"}],"termid":"MONDO:0007277","xrefs":{"Monarch":{"xref_id":"0007277"}}}


id: MONDO:0017937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0019548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant intermediate Charcot-Marie-Tooth disease with neuropathic pain","secondary_identifiers":["UMLS:C4755257","GARD:21446","Orphanet:324585","MEDGEN:1650625"],"termid":"MONDO:0017937","xrefs":{"Monarch":{"xref_id":"0017937"}}}


id: GO:0008842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + a purine nucleoside = monophosphate + a purine mononucleotide.","definition_xrefs":["EC:2.7.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"diphosphate-purine nucleoside kinase activity","secondary_identifiers":["MetaCyc:2.7.1.143-RXN"],"synonyms":[{"name":"diphosphate-dependent nucleoside kinase activity","type":"related"},{"name":"diphosphate:purine nucleoside phosphotransferase activity","type":"related"},{"name":"pyrophosphate-dependent nucleoside kinase activity","type":"related"},{"name":"pyrophosphate-purine nucleoside kinase activity","type":"related"}],"termid":"GO:0008842"}


id: PBO:0054096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1449","termid":"PBO:0054096"}


id: PBO:0078897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 8-1","termid":"PBO:0078897"}


id: PBO:0084174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hippo-like kinase of the Mitotic Exit Network; promotes exit by activating the Dbf2p kinase; component of a non-canonical Hippo pathway with Sps1p required for prospore membrane closure, spindle disassembly and sustained release of Cdc14p during meiotic anaphase II; complexes with Sps1p and contributes to its phosphorylation; phosphorylates the RNAPII CTD during mitosis; localizes to the bud neck and SPB during anaphase and telophase; relocalizes to the cytoplasm upon DNA replication stress","termid":"PBO:0084174"}


id: PBO:0076598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 20","termid":"PBO:0076598"}


id: MONDO:0044255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Multiple genes influence normal human skin, hair, and/or eye pigmentation. Pigmentation phenotypes influenced by variation in the OCA2 gene are termed SHEP1. The SHEP2 association (OMIM:266300) is determined by variation at the MC1R locus (OMIM:155555) and describes a phenotype predominantly characterized by red hair and fair skin. SHEP3 (OMIM:601800) encompasses pigment variation influenced by the TYR gene (OMIM:606933); SHEP4 (OMIM:113750), that influenced by the SLC24A5 gene (OMIM:609802). Variation in the SLC45A2 (OMIM:606202) and SLC24A4 (OMIM:609840) genes result in the phenotypic associations SHEP5 (OMIM:227240) and SHEP6 (OMIM:210750), respectively. Sequence variation thought to affect expression of KITLG (OMIM:184745) results in the SHEP7 (OMIM:611664) phenotypic association. SHEP8 (OMIM:611724) is associated with variation in the IRF4 gene (OMIM:601900). Polymorphism in the 3-prime untranslated region of the ASIP gene (OMIM:600201) influences the SHEP9 association (OMIM:611742). The SHEP10 association (OMIM:612267) comprises variation in the TPCN2 gene (OMIM:612163), and SHEP11 (OMIM:612271) is associated with polymorphism near the TYRP1 gene (OMIM:115501).","definition_xrefs":["OMIM:227220"],"gene_count":0,"genotype_count":0,"name":"obsolete skin/hair/eye pigmentation, variation in, 1 (obsolete MONDO:0044255)","synonyms":[{"name":"Brown eye color 2","type":"related"},{"name":"SHEP1","type":"related"},{"name":"eye color 3","type":"related"},{"name":"eye color, Brown/blue","type":"related"},{"name":"eye color, blue/Nonblue","type":"related"},{"name":"hair color 3","type":"related"},{"name":"skin/hair/eye pigmentation 1, Blond/Brown hair","type":"related"},{"name":"skin/hair/eye pigmentation 1, blond/brown hair","type":"exact"},{"name":"skin/hair/eye pigmentation 1, blue/Brown eyes","type":"related"},{"name":"skin/hair/eye pigmentation 1, blue/Nonblue eyes","type":"related"},{"name":"skin/hair/eye pigmentation 1, blue/nonblue eyes","type":"exact"},{"name":"skin/hair/eye pigmentation, variation IN, 1","type":"related"}],"termid":"MONDO:0044255","xrefs":{"Monarch":{"xref_id":"0044255"}}}


id: MONDO:0011735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Hyper IgM syndrome characterized by mutations of the CD40 gene. In this type, Immature B cells cannot receive signal 2 from helper T cells which is necessary to mature into mature B cells.","definition_xrefs":["Wikipedia:Hyper-IgM_syndrome_type_3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgM syndrome","termid":"MONDO:0003947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hyper-IgM syndrome type 3","secondary_identifiers":["OMIM:606843","Orphanet:101090","GARD:10579","MEDGEN:328419","UMLS:C1720957","DOID:0060023"],"synonyms":[{"name":"CD40 deficiency","type":"related"},{"name":"CD40 hyper-IgM syndrome","type":"exact"},{"name":"HIGM3","type":"exact"},{"name":"hyper IgM syndrome 3","type":"related"},{"name":"hyper-IgM syndrome 3","type":"related"},{"name":"hyper-IgM syndrome caused by mutation in CD40","type":"exact"},{"name":"hyper-IgM syndrome due to CD40 deficiency","type":"exact"},{"name":"immunodeficiency with hyper IgM type 3","type":"related"},{"name":"immunodeficiency with hyper-IgM type 3","type":"exact"},{"name":"immunodeficiency with hyper-IgM, type 3","type":"related"},{"name":"type 3 hyper-IgM immunodeficiency","type":"exact"}],"termid":"MONDO:0011735","xrefs":{"Monarch":{"xref_id":"0011735"}}}


id: GO:0006569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process","termid":"GO:1902222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-tryptophan catabolic process","secondary_identifiers":["Reactome:R-HSA-71240"],"synonyms":[{"name":"tryptophan breakdown","type":"exact"},{"name":"tryptophan catabolic process","type":"related"},{"name":"tryptophan catabolic process, using tryptophanase","type":"narrow"},{"name":"tryptophan catabolism","type":"exact"},{"name":"tryptophan catabolism, using tryptophanase","type":"narrow"},{"name":"tryptophan degradation","type":"exact"}],"termid":"GO:0006569"}


id: GO:0010378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the circadian clock maintains robust and accurate timing over a broad range of physiological temperatures. The circadian clock is an endogenous 24-h timer found in most eukaryotes and in photosynthetic bacteria. The clock drives rhythms in the physiology, biochemistry, and metabolism of the organisms.","definition_xrefs":["PMID:16617099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"temperature compensation of the circadian clock","synonyms":[{"name":"regulation of the circadian clock by temperature","type":"related"}],"termid":"GO:0010378"}


id: MONDO:0015946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic epidermal disorder (obsolete MONDO:0015946)","secondary_identifiers":["Orphanet:183426"],"synonyms":[{"name":"genetic epidermal disorder","type":"related"}],"termid":"MONDO:0015946","xrefs":{"Monarch":{"xref_id":"0015946"}}}


id: PBO:0063179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX1 antisense RNA 1","termid":"PBO:0063179"}


id: PATO:0000978
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000978 relative permeability value (obsolete PATO:0000978)","termid":"PATO:0000978"}


id: MONDO:0020611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--kell system (obsolete MONDO:0020611)","secondary_identifiers":["OMIM:110900"],"synonyms":[{"name":"BLOOD GROUP--KELL SYSTEM","type":"related"},{"name":"Blood Group--Kell-Cellano System","type":"related"},{"name":"K(0)","type":"related"},{"name":"KEL","type":"related"},{"name":"Kell-Null","type":"related"},{"name":"Ko","type":"related"},{"name":"blood group, Kell","type":"exact"}],"termid":"MONDO:0020611","xrefs":{"Monarch":{"xref_id":"0020611"}}}


id: PBO:0086344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridine synthase; catalyzes pseudouridylation at positions 35 and 56 in U2 snRNA, position 50 in 5S rRNA, position 13 in cytoplasmic tRNAs, and position 35 in pre-tRNA(Tyr); also pseudouridylates some mRNAs; relocates from nucleus to cytoplasm during heat shock and differentially modifies some mRNAs during heat shock; conserved in archaea, vertebrates, and some bacteria","termid":"PBO:0086344"}


id: PBO:0018046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc15","termid":"PBO:0018046"}


id: FYECO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing peptone, yeast extract and other components. The concentration of glucose is typically around 2-3%. Note that peptone, which is a mixture of nutrients generated by proteolytic digestion of animal protein with trypsin, is not normally a component of S. pombe rich media (it is however normally present in S. cerevisiae rich media).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPD","synonyms":[{"name":"glucose rich medium, peptone/YE nitrogen source","type":"broad"}],"termid":"FYECO:0000201"}


id: MONDO:0002573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pleomorphic rhabdomyosarcoma (obsolete MONDO:0002573)","termid":"MONDO:0002573","xrefs":{"Monarch":{"xref_id":"0002573"}}}


id: GO:0006273
data:
  {"annotated_genes":["SJAG_05197","SJAG_00814","SJAG_02818","SJAG_02690","SJAG_02294","SJAG_05239","SJAG_00618","SJAG_05232","SJAG_00198","SJAG_02199","SJAG_04190","SJAG_04183","SJAG_04877","SJAG_03495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96929],"is_not":false,"summary":null,"term":"GO:0006273"},{"annotations":[94738,108569,103711,102315,104403,117621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[92158,100138,103637,100993,100102,94560,92069],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The process in which an existing DNA strand is extended in a net 3' to 5' direction by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication. Lagging strand DNA elongation proceeds by discontinuous synthesis of short stretches of DNA, known as Okazaki fragments, from RNA primers; these fragments are then joined by DNA ligase. Although each segment of nascent DNA is synthesized in the 5' to 3' direction, the overall direction of lagging strand synthesis is 3' to 5', mirroring the progress of the replication fork.","definition_xrefs":["GOC:mah","ISBN:071673706X","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in DNA replication","termid":"GO:0006271"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00618":null,"SJAG_00814":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_02818":null,"SJAG_03495":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"lagging strand elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006273","terms_by_termid":{"GO:0006273":null,"GO:1903459":null,"GO:1903461":null}}


id: PBO:0026669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle_phase_transition","termid":"PBO:0026669"}


id: MONDO:0007630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"North Carolina macular dystrophy (NCMD) is a non-progressive autosomal dominant macular disorder of congenital or infantile onset characterized by loss of central vision, the accumulation of drusen in the macula and atrophy of photoreceptor cells with a variable phenotype at macular examination.","definition_xrefs":["Orphanet:75327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular dystrophy, retinal","termid":"MONDO:0031166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"North Carolina macular dystrophy","secondary_identifiers":["DOID:0070439","icd11.foundation:1931008217","MESH:C537835","OMIM:136550","MEDGEN:147590","UMLS:C0730294","GARD:9179","ICD10CM:H35.5","SCTID:312925009"],"synonyms":[{"name":"CAPE dystrophy","type":"exact"},{"name":"CAPED","type":"exact"},{"name":"MCDR1","type":"exact"},{"name":"NCMD","type":"exact"},{"name":"North Carolina macular dystrophy","type":"exact"},{"name":"North Carolina macular dystrophy, retinal 1","type":"exact"},{"name":"caped","type":"exact"},{"name":"central areolar pigment epithelial dystrophy","type":"exact"},{"name":"central retinal pigment epithelial dystrophy","type":"exact"},{"name":"foveal dystrophy progressive","type":"related"},{"name":"foveal dystrophy, progressive","type":"related"},{"name":"foveal dystrophy, progressive, formerly","type":"related"},{"name":"macular dystrophy 1, North Carolina type","type":"exact"},{"name":"macular dystrophy retinal 1 North Carolina type","type":"related"},{"name":"macular dystrophy, retinal, 1, NORTH Carolina type","type":"related"},{"name":"progressive foveal dystrophy","type":"exact"},{"name":"retinal pigment epithelial dystrophy central","type":"related"},{"name":"retinal pigment epithelial dystrophy, central","type":"related"}],"termid":"MONDO:0007630","xrefs":{"Monarch":{"xref_id":"0007630"}}}


id: GO:0019692
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665","SJAG_04627","SJAG_02874","SJAG_02948","SJAG_04487","SJAG_03771","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[94990,106727,91946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[98490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[117461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[88889,107839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[88890,91947,117462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[117463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[98491,107840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[98492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose phosphate metabolism","type":"exact"}],"termid":"GO:0019692","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null,"GO:0035863":null,"GO:0046081":null}}


id: PBO:0043576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type X alpha 1 chain","termid":"PBO:0043576"}


id: MONDO:0002334
data:
  {"annotated_genes":["SJAG_05979","SJAG_01748","SJAG_03905","SJAG_00980","SJAG_02460","SJAG_01013","SJAG_01008","SJAG_03453","SJAG_03081","SJAG_03424","SJAG_01548","SJAG_02527","SJAG_01349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86888,86735,86733,86734,86736,86889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[85709,85710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"},{"annotations":[85200,85199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018881"},{"annotations":[85250,85251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[86855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"Neoplasms of the hematopoietic system, including hematopoietic cell neoplasms (e.g. leukemias, lymphomas) and non-hematopoietic cell neoplasms that can affect the hematopoietic system (e.g. lymph node and splenic sarcomas). --2003","definition_xrefs":["NCIT:C35813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01008":null,"SJAG_01013":null,"SJAG_01349":null,"SJAG_01548":null,"SJAG_01748":null,"SJAG_02460":null,"SJAG_02527":null,"SJAG_03081":null,"SJAG_03424":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hematopoietic and lymphoid system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1512393","MEDGEN:268180","SCTID:129154003","DOID:2531","MESH:D019337"],"synonyms":[{"name":"blood cancer","type":"narrow"},{"name":"blood neoplasm (disease)","type":"exact"},{"name":"blood tumor","type":"exact"},{"name":"blood tumour","type":"exact"},{"name":"haematological tumours","type":"exact"},{"name":"haematopoietic and lymphoid system tumour","type":"exact"},{"name":"haematopoietic cancer","type":"narrow"},{"name":"haematopoietic neoplasm","type":"broad"},{"name":"haematopoietic neoplasm (morphologic abnormality)","type":"broad"},{"name":"haematopoietic system neoplasm","type":"exact"},{"name":"haematopoietic system tumour","type":"exact"},{"name":"haematopoietic tumours","type":"exact"},{"name":"hematologic cancer","type":"related"},{"name":"hematologic malignancy","type":"narrow"},{"name":"hematologic neoplasm","type":"broad"},{"name":"hematological tumors","type":"exact"},{"name":"hematopoietic and lymphoid system neoplasm","type":"exact"},{"name":"hematopoietic and lymphoid system tumor","type":"exact"},{"name":"hematopoietic cancer","type":"narrow"},{"name":"hematopoietic neoplasm","type":"broad"},{"name":"hematopoietic neoplasm (morphologic abnormality)","type":"broad"},{"name":"hematopoietic system neoplasm","type":"exact"},{"name":"hematopoietic system tumor","type":"exact"},{"name":"hematopoietic tumors","type":"exact"},{"name":"malignant haematopoietic neoplasm","type":"related"},{"name":"malignant haematopoietic neoplasm (morphologic abnormality)","type":"narrow"},{"name":"malignant hematopoietic neoplasm (morphologic abnormality)","type":"narrow"},{"name":"neoplasm of blood","type":"exact"},{"name":"neoplasm of haematopoietic system","type":"exact"},{"name":"neoplasm of hematopoietic system","type":"exact"},{"name":"tumor of blood","type":"exact"},{"name":"tumor of hematopoietic system","type":"exact"},{"name":"tumour of blood","type":"exact"},{"name":"tumour of haematopoietic system","type":"exact"}],"termid":"MONDO:0002334","terms_by_termid":{"MONDO:0007925":null,"MONDO:0009693":null,"MONDO:0011508":null,"MONDO:0018874":null,"MONDO:0018881":null},"xrefs":{"Monarch":{"xref_id":"0002334"}}}


id: PBO:0055514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2948","termid":"PBO:0055514"}


id: PBO:0005432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug117","termid":"PBO:0005432"}


id: PBO:0057096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 192","termid":"PBO:0057096"}


id: GO:0098833
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region of the plasma membrane and underlying cytoplasm which surround the the active zone, into which synaptic vesicle membranes are recycled following exocytosis. It is especially enriched in endocytic proteins following intense activity.","definition_xrefs":["PMID:17455288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic endocytic zone","termid":"GO:0098833"}


id: GO:0003984
data:
  {"annotated_genes":["SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112699],"is_not":false,"summary":null,"term":"GO:0003984"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 2 pyruvate = (2S)-2-acetolactate + CO2. Can also convert 2-oxobutanoate and pyruvate to (S)-2-ethyl-2-hydroxy-3-oxobutanoate.","definition_xrefs":["EC:2.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016744"],"is_obsolete":false,"name":"acetolactate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ACETOLACTSYN-RXN"],"synonyms":[{"name":"acetohydroxy acid synthetase activity","type":"related"},{"name":"acetohydroxyacid synthase activity","type":"related"},{"name":"acetolactate pyruvate-lyase (carboxylating) activity","type":"related"},{"name":"acetolactic synthetase activity","type":"related"},{"name":"alpha-acetohydroxy acid synthetase activity","type":"related"},{"name":"alpha-acetohydroxyacid synthase activity","type":"related"},{"name":"alpha-acetolactate synthase activity","type":"related"},{"name":"alpha-acetolactate synthetase activity","type":"related"},{"name":"pyruvate:pyruvate acetaldehydetransferase (decarboxylating)","type":"related"}],"termid":"GO:0003984","terms_by_termid":{"GO:0003984":null}}


id: MONDO:0018198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute encephalopathy with biphasic seizures and late reduced diffusion (AESD) is a rare childhood-onset epilepsy syndrome associated with infection and characterized by a biphasic clinical course. The initial symptom is a prolonged febrile seizure on day 1 (the first phase). Afterwards, patients have variable levels of consciousness from normal to coma. Irrespective of the consciousness levels, magnetic resonance imaging (MRI) during the first 2 days shows no abnormality. During the second phase (usually days 4 - 6), patients show a cluster of seizures and deterioration of consciousness. Diffusion-weighted images (DWI) on MRI reveal the brain lesions with reduced diffusion predominantly in the subcortical white matter. After the second acute phase, consciousness levels improve with the emerging focal neurological signs. Neurological outcomes of AESD vary from normal to mild or severe sequelae including cerebral atrophy, mental retardation, paralysis and epilepsy.","definition_xrefs":["Orphanet:363549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"acute encephalopathy with biphasic seizures and late reduced diffusion","secondary_identifiers":["GARD:21552","MEDGEN:1645136","UMLS:C4707658","NANDO:2200901","SCTID:766044005","NANDO:2100247","NANDO:1200552"],"synonyms":[{"name":"AESD","type":"exact"},{"name":"AIEF","type":"exact"},{"name":"acute infantile encephalopathy predominantly affecting the frontal lobes","type":"exact"}],"termid":"MONDO:0018198","xrefs":{"Monarch":{"xref_id":"0018198"}}}


id: GO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized vacuole of eukaryotic cells, especially Protozoa, that fills with water from the cytoplasm and then discharges this externally by the opening of contractile vacuole pores. One of its functions is osmoregulatory.","definition_xrefs":["GOC:jl","PMID:10503189","PMID:23890380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"contractile vacuole complex","termid":"GO:0062159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"contractile vacuole","secondary_identifiers":["Wikipedia:Contractile_vacuole"],"synonyms":[{"name":"central bladder","type":"related"},{"name":"central vacuole","type":"related"}],"termid":"GO:0000331"}


id: FYPO:0007121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing iron ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on iron","synonyms":[{"name":"normal cell population growth in presence of iron","type":"exact"},{"name":"normal cell population growth on iron","type":"exact"},{"name":"normal cell population growth on iron ion","type":"exact"},{"name":"normal cellular response to iron","type":"related"},{"name":"normal growth on iron ions","type":"exact"},{"name":"normal vegetative cell population growth on iron","type":"exact"}],"termid":"FYPO:0007121"}


id: PBO:0086672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; partially overlaps RND5-3; YLR156C-A has a paralog, YLR159C-A, that arose from a segmental duplication","termid":"PBO:0086672"}


id: PBO:0052434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLC1 antisense RNA 1","termid":"PBO:0052434"}


id: MONDO:0018633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"20q11.2 microdeletion syndrome is a rare, genetic, syndromic intellectual disability characterized by psychomotor delay, hypotonia, feeding difficulties, failure to thrive, anomalies of the hands and feet (clinodactyly, camptodactyly, brachydactyly, feet malposition), and craniofacial dysmorphism. Associated prenatal growth retardation, and gastrointestinal, heart and eye anomalies have been reported.","definition_xrefs":["Orphanet:444051"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 20","termid":"MONDO:0016918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20q11.2 microdeletion syndrome","secondary_identifiers":["UMLS:C5680063","GARD:21859","MEDGEN:1810637"],"synonyms":[{"name":"Del(20)(q11.2)","type":"exact"},{"name":"monosomy 20q11","type":"exact"}],"termid":"MONDO:0018633","xrefs":{"Monarch":{"xref_id":"0018633"}}}


id: PBO:0060998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing 3","termid":"PBO:0060998"}


id: PR:Q09892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase HOG1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:7501024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitogen-activated protein kinase HOG1","termid":"PR:000027499"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase sty1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.06c","secondary_identifiers":["UniProtKB:Q09892","PR:000027500"],"synonyms":[{"name":"HOG1","type":"related"},{"name":"PHH1","type":"related"},{"name":"SPAC24B11.06C","type":"related"},{"name":"SPC1","type":"related"},{"name":"Spom972h-HOG1","type":"exact"}],"termid":"PR:Q09892"}


id: GO:0004956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostaglandin D receptor activity","synonyms":[{"name":"PGD receptor activity","type":"related"},{"name":"PGD(2) receptor activity","type":"exact"}],"termid":"GO:0004956"}


id: GO:0007378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the amnioserosa, an epithelium that occupies a hole in the embryonic dorsal epidermis. This occurs by the transformation of a narrow strip of cells at the dorsal midline of the blastoderm from columnar to squamous cells, accompanied by a lateral shift.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amnioserosa formation","termid":"GO:0007378"}


id: PBO:0004518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidylate deaminase (predicted)","termid":"PBO:0004518"}


id: MONDO:0006575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete loiasis (obsolete MONDO:0006575)","termid":"MONDO:0006575","xrefs":{"Monarch":{"xref_id":"0006575"}}}


id: MONDO:0022918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease that has its basis in the disruption of cytokine activity.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokine deficiency (obsolete MONDO:0022918)","synonyms":[{"name":"cytokine activity disease","type":"exact"},{"name":"disorder of cytokine activity","type":"exact"}],"termid":"MONDO:0022918","xrefs":{"Monarch":{"xref_id":"0022918"}}}


id: PBO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tert-butyl_hydroperoxide","termid":"PBO:0030378"}


id: MONDO:0008536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature-sensitive lethal mutation","secondary_identifiers":["UMLS:C1861242","MEDGEN:396088","OMIM:187340"],"synonyms":[{"name":"temperature-sensitive lethal mutation","type":"exact"}],"termid":"MONDO:0008536","xrefs":{"Monarch":{"xref_id":"0008536"}}}


id: PBO:0086081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose from dolichyl phosphate-D-mannose to protein serine/threonine residues of secretory proteins; reaction is essential for cell wall rigidity; member of a family of mannosyltransferases","termid":"PBO:0086081"}


id: PBO:0063461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor C","termid":"PBO:0063461"}


id: GO:0046528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process following disc eversion whereby imaginal discs fuse with adjacent disc derivatives to form a continuous adult epidermis.","definition_xrefs":["PMID:11494317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc fusion","termid":"GO:0046528"}


id: GO:0030488
data:
  {"annotated_genes":["SJAG_00325","SJAG_05334","SJAG_00499","SJAG_01261","SJAG_04736","SJAG_03367","SJAG_00255","SJAG_02302","SJAG_04649","SJAG_04993","SJAG_04367","SJAG_01375","SJAG_02637","SJAG_04680","SJAG_02099","SJAG_01269","SJAG_01314","SJAG_02386","SJAG_04848","SJAG_00886","SJAG_05249","SJAG_02352","SJAG_04890","SJAG_04181","SJAG_02042","SJAG_04735","SJAG_04453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88091,89971,90452,92304,93430,94206,95724,97348,97568,97575,100462,102376,105401,107938,111597,114267,117407],"is_not":false,"summary":null,"term":"GO:0030488"},{"annotations":[100869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[118422,115157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[106234,109614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[89970,105249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[98906,100870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[103620,106736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[114268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[87779,93431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[102377,97349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00886":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02302":null,"SJAG_02352":null,"SJAG_02386":null,"SJAG_02637":null,"SJAG_03367":null,"SJAG_04181":null,"SJAG_04367":null,"SJAG_04453":null,"SJAG_04649":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_04993":null,"SJAG_05249":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030488","terms_by_termid":{"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002939":null,"GO:0002940":null,"GO:0002946":null,"GO:0030488":null,"GO:0070901":null,"GO:0106004":null,"GO:0106217":null}}


id: PBO:0044671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damage specific DNA binding protein 2","termid":"PBO:0044671"}


id: PBO:0050277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box containing 4","termid":"PBO:0050277"}


id: GO:0021778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an oligodendrocyte in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell fate specification","termid":"GO:0021780"},{"relation_name":"part_of","term_name":"oligodendrocyte cell fate commitment","termid":"GO:0021779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte cell fate specification","termid":"GO:0021778"}


id: PBO:0029772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_shape","termid":"PBO:0029772"}


id: GO:1900159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone mineralization involved in bone maturation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of bone mineralization","termid":"GO:0030501"},{"relation_name":"is_a","term_name":"regulation of bone mineralization involved in bone maturation","termid":"GO:1900157"},{"relation_name":"positively_regulates","term_name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone mineralization involved in bone maturation","synonyms":[{"name":"activation of bone mineralization involved in bone maturation","type":"narrow"},{"name":"up regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"up-regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"upregulation of bone mineralization involved in bone maturation","type":"exact"}],"termid":"GO:1900159"}


id: PR:O94380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI transamidase component PIG-T that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12959:SF11","OMA:SCHPO03902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI transamidase component PIG-T homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.15","secondary_identifiers":["UniProtKB:O94380"],"synonyms":[{"name":"Spom972h-PIGT","type":"exact"}],"termid":"PR:O94380"}


id: PBO:0067598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 761, pseudogene","termid":"PBO:0067598"}


id: MONDO:0800330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile myoclonic epilepsy","termid":"MONDO:0009696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"myoclonic epilepsy, juvenile, 2","secondary_identifiers":["UMLS:C3887932","MEDGEN:854640"],"synonyms":[{"name":"EJM2","type":"exact"}],"termid":"MONDO:0800330","xrefs":{"Monarch":{"xref_id":"0800330"}}}


id: GO:0030484
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The contractile fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete muscle fiber (obsolete GO:0030484)","synonyms":[{"name":"muscle fiber","type":"exact"},{"name":"muscle fibre","type":"exact"}],"termid":"GO:0030484"}


id: MOD:00915
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-proline residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-proline residue","synonyms":[{"name":"ModPro","type":"exact"}],"termid":"MOD:00915"}


id: GO:0047548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyleneglutarate = 2-methylene-3-methylsuccinate.","definition_xrefs":["EC:5.4.99.4","RHEA:13793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"2-methyleneglutarate mutase activity","secondary_identifiers":["KEGG_REACTION:R03908","MetaCyc:2-METHYLENEGLUTARATE-MUTASE-RXN"],"synonyms":[{"name":"2-methyleneglutarate carboxy-methylenemethylmutase activity","type":"related"},{"name":"alpha-methyleneglutarate mutase activity","type":"related"}],"termid":"GO:0047548"}


id: PBO:0066179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 4B","termid":"PBO:0066179"}


id: PBO:0046334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOX2 antisense RNA 1","termid":"PBO:0046334"}


id: PBO:0002807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase copper chaperone Ccs1","termid":"PBO:0002807"}


id: GO:0006883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of sodium ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"sodium ion homeostasis","termid":"GO:0055078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular sodium ion homeostasis","synonyms":[{"name":"cellular sodium ion homeostasis","type":"exact"}],"termid":"GO:0006883"}


id: PBO:0089016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop6/Pop7 ortholog","termid":"PBO:0089016"}


id: PBO:0062467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 158 pseudogene","termid":"PBO:0062467"}


id: PBO:0067595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 757, pseudogene","termid":"PBO:0067595"}


id: SO:1000120
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000120 sequence_variant_causing_inactive_catalytic_site (obsolete SO:1000120)","synonyms":[{"name":"mutation causing inactive catalytic site","type":"related"},{"name":"sequence variant causing inactive catalytic site","type":"exact"}],"termid":"SO:1000120"}


id: GO:0048354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur as part of seed coat development; mucilage is normally synthesized during seed coat development.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"is_a","term_name":"mucilage metabolic process involved in seed coat development","termid":"GO:0048359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage biosynthetic process involved in seed coat development","synonyms":[{"name":"mucilage anabolism during seed coat development","type":"exact"},{"name":"mucilage biosynthetic process during seed coat development","type":"related"},{"name":"mucilage formation during seed coat development","type":"exact"},{"name":"mucilage synthesis during seed coat development","type":"exact"}],"termid":"GO:0048354"}


id: MONDO:0009226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fibrochondrogenesis in which the cause of the disease is a mutation in the COL11A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrochondrogenesis","termid":"MONDO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibrochondrogenesis 1","secondary_identifiers":["OMIM:228520","MEDGEN:479768","DOID:0080672","UMLS:C3278138"],"synonyms":[{"name":"COL11A1 fibrochondrogenesis","type":"exact"},{"name":"FBCG1","type":"related"},{"name":"fibrochondrogenesis 1","type":"exact"},{"name":"fibrochondrogenesis caused by mutation in COL11A1","type":"exact"},{"name":"fibrochondrogenesis type 1","type":"exact"}],"termid":"MONDO:0009226","xrefs":{"Monarch":{"xref_id":"0009226"}}}


id: PBO:0056941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-1 host gene","termid":"PBO:0056941"}


id: FYPO:0006744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to tschimganine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to tschimganine","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to tschimganine","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to TMN","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to tschimganine during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to tschimganine during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to tschimganine","type":"exact"}],"termid":"FYPO:0006744"}


id: PBO:0052125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily E regulatory subunit 3","termid":"PBO:0052125"}


id: GO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity.","definition_xrefs":["GOC:go_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cyclin-dependent protein serine/threonine kinase activity","synonyms":[{"name":"regulation of CDK activity","type":"exact"},{"name":"regulation of cyclin-dependent protein kinase activity","type":"broad"}],"termid":"GO:0000079"}


id: PBO:0074824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 20","termid":"PBO:0074824"}


id: MONDO:0957473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniosynostosis-facial dysmorphism-chiari-1 malformation-developmental and language delay syndrome","secondary_identifiers":["MEDGEN:1843399","UMLS:C5816752","Orphanet:647681"],"termid":"MONDO:0957473","xrefs":{"Monarch":{"xref_id":"0957473"}}}


id: GO:0014821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within phasic smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the phasic smooth muscle, the muscle contraction occurs without an ordered sarcomeric structure. Phasic smooth muscle contraction occurs in a series of discrete contractions and relaxations.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phasic smooth muscle contraction","termid":"GO:0014821"}


id: PBO:0051376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3/OR22-2 (pseudogene)","termid":"PBO:0051376"}


id: GO:0098539
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the transport vesicle membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"transport vesicle membrane","termid":"GO:0030658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"cytoplasmic side of transport vesicle membrane","synonyms":[{"name":"external side of transport vesicle membrane","type":"exact"}],"termid":"GO:0098539"}


id: PBO:0029687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_iron_ion_starvation-repressed_proteins","termid":"PBO:0029687"}


id: MONDO:0019053
data:
  {"annotated_genes":["SJAG_04823","SJAG_00891","SJAG_04763","SJAG_04146","SJAG_02788","SJAG_02384","SJAG_01165","SJAG_00326","SJAG_00702","SJAG_02997","SJAG_02693","SJAG_02619","SJAG_02848","SJAG_03440","SJAG_05950","SJAG_03324","SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013571"},{"annotations":[85835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009958"},{"annotations":[85057,85058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013726"},{"annotations":[86764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013948"},{"annotations":[86408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054549"},{"annotations":[86765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013949"},{"annotations":[86763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013950"},{"annotations":[86766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013951"},{"annotations":[86767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013952"},{"annotations":[86725,86724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013967"},{"annotations":[86371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008953"},{"annotations":[86715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011101"},{"annotations":[86360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008954"},{"annotations":[86629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008736"},{"annotations":[86747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013927"},{"annotations":[86749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013930"},{"annotations":[86750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013931"},{"annotations":[86752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013936"},{"annotations":[86754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013937"},{"annotations":[86755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013938"},{"annotations":[86753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013939"},{"annotations":[86758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013942"},{"annotations":[86756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013943"},{"annotations":[86761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013945"},{"annotations":[85832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009959"},{"annotations":[85570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008972"},{"annotations":[85419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014743"}]},"cv_name":"mondo","definition":"A group of congenital disorders of lipid metabolism, caused by loss of the normal peroxisomes. Signs and symptoms include developmental delays, intellectual disability, characteristic facial dysmorphic features, hepatomegaly, and hypotonia.","definition_xrefs":["NCIT:C85005"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_02384":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02788":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04763":null,"SJAG_04823":null,"SJAG_05950":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"peroxisomal disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:238059005","icd11.foundation:782299726","ICD9:277.86","NANDO:2100166","GARD:18885","DOID:906","MEDGEN:129185","Orphanet:68373","UMLS:C0282528","NANDO:1200758","ICD9:277.89"],"synonyms":[{"name":"disorder of peroxisomal function","type":"exact"},{"name":"peroxisomal disease","type":"exact"},{"name":"peroxisomal disorder","type":"exact"},{"name":"peroxisomal function disorder","type":"exact"}],"termid":"MONDO:0019053","terms_by_termid":{"MONDO:0008736":null,"MONDO:0008953":null,"MONDO:0008954":null,"MONDO:0008972":null,"MONDO:0009958":null,"MONDO:0009959":null,"MONDO:0011101":null,"MONDO:0013571":null,"MONDO:0013726":null,"MONDO:0013927":null,"MONDO:0013930":null,"MONDO:0013931":null,"MONDO:0013936":null,"MONDO:0013937":null,"MONDO:0013938":null,"MONDO:0013939":null,"MONDO:0013942":null,"MONDO:0013943":null,"MONDO:0013945":null,"MONDO:0013948":null,"MONDO:0013949":null,"MONDO:0013950":null,"MONDO:0013951":null,"MONDO:0013952":null,"MONDO:0013967":null,"MONDO:0014743":null,"MONDO:0054549":null},"xrefs":{"Monarch":{"xref_id":"0019053"}}}


id: MONDO:0015174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune enteropathy","termid":"MONDO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune enteropathy type 3","secondary_identifiers":["icd11.foundation:1137579941","Orphanet:103917"],"termid":"MONDO:0015174","xrefs":{"Monarch":{"xref_id":"0015174"}}}


id: PBO:0003936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec15","termid":"PBO:0003936"}


id: GO:0034510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which centromeres are physically detached from each other during chromosome separation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"chromosome separation","termid":"GO:0051304"},{"relation_name":"part_of","term_name":"nuclear chromosome segregation","termid":"GO:0098813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"centromere separation","termid":"GO:0034510"}


id: MONDO:0001948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Riedel's fibrosing thyroiditis (obsolete MONDO:0001948)","termid":"MONDO:0001948","xrefs":{"Monarch":{"xref_id":"0001948"}}}


id: PBO:0004205
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.11.1.9","termid":"PBO:0004205"}


id: MONDO:0020103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete constitutional hemolytic anemia due to acanthocytosis (obsolete MONDO:0020103)","secondary_identifiers":["Orphanet:98366"],"synonyms":[{"name":"constitutional hemolytic anemia due to acanthocytic disorder","type":"exact"}],"termid":"MONDO:0020103","xrefs":{"Monarch":{"xref_id":"0020103"}}}


id: PBO:0064837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12A","termid":"PBO:0064837"}


id: GO:0032443
data:
  {"annotated_genes":["SJAG_02104","SJAG_02044","SJAG_01307","SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88079,88080,105310],"is_not":false,"summary":null,"term":"GO:0032443"},{"annotations":[93383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[109311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ergosterol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol biosynthetic process","termid":"GO:0106118"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"ergosterol biosynthetic process","termid":"GO:0006696"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032443","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: PBO:0045623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 35 (pseudogene)","termid":"PBO:0045623"}


id: MONDO:0008425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Shprintzen-Goldberg omphalocele syndrome is a very rare inherited malformation syndrome characterized by omphalocele, scoliosis, mild dysmorphic features (downslanted palpebral fissures, s-shaped eyelids and thin upper lip), laryngeal and pharyngeal hypoplasia and learning disabilities.","definition_xrefs":["Orphanet:3164"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele syndrome, Shprintzen-Goldberg type","secondary_identifiers":["MESH:C537329","UMLS:C1866958","MEDGEN:356653","GARD:9850","OMIM:182210","SCTID:716230005"],"synonyms":[{"name":"Shprintzen omphalocele syndrome","type":"related"},{"name":"Shprintzen-Goldberg omphalocele syndrome","type":"related"},{"name":"laryngeal and pharyngeal hypoplasia with omphalocele","type":"related"},{"name":"omphalocele with hypoplasia of pharynx and larynx, learning disability, dysmorphic facies, and scoliosis","type":"related"},{"name":"omphalocele, laryngeal and pharyngeal hypoplasia, learning disabilities, dysmorphic facies and spinal anomalies","type":"related"},{"name":"pharynx and larynx hypoplasia with omphalocele","type":"related"}],"termid":"MONDO:0008425","xrefs":{"Monarch":{"xref_id":"0008425"}}}


id: FYPO:0001973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear division, cytokinesis and subsequent cell separation are abnormal, resulting in the formation of a cell in which an undivided mass of DNA is located on one side of the septum. The septum does not degrade.","definition_xrefs":["PomBase:vw","PMID:3283148","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell separation after cytokinesis, with abnormal nuclear division (obsolete FYPO:0001973)","synonyms":[{"name":"abnormal cell separation after cytokinesis, with abnormal nuclear division during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis, with abnormal nuclear division during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation, with abnormal nuclear division","type":"exact"}],"termid":"FYPO:0001973"}


id: GO:0106189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to the hydrolysis of a diphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to the hydrolysis of a diphosphate (obsolete GO:0106189)","termid":"GO:0106189"}


id: MONDO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atypical teratoid rhabdoid tumor (obsolete MONDO:0002215)","termid":"MONDO:0002215","xrefs":{"Monarch":{"xref_id":"0002215"}}}


id: MONDO:0021163
data:
  {"annotated_genes":["SJAG_01144","SJAG_00440","SJAG_03677","SJAG_02231","SJAG_03787"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[85688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[86306,86307,86308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the kidney. Representative examples of benign renal neoplasms include fibroma, lipoma, oncocytoma, and juxtaglomerular cell tumor. Representative examples of malignant renal neoplasms include renal cell carcinoma, renal pelvis carcinoma, Wilms tumor, rhabdoid tumor, sarcoma, and lymphoma.","definition_xrefs":["NCIT:C3150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"urinary system neoplasm","termid":"MONDO:0021066"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_01144":null,"SJAG_02231":null,"SJAG_03677":null,"SJAG_03787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:5967","ONCOTREE:KIDNEY","EFO:0003865","SCTID:126880001","ICD9:239.5","UMLS:C0022665"],"synonyms":[{"name":"kidney neoplasm","type":"exact"},{"name":"kidney neoplasm (disease)","type":"exact"},{"name":"kidney tumor","type":"exact"},{"name":"kidney tumour","type":"exact"},{"name":"neoplasm of kidney","type":"exact"},{"name":"neoplasm of the kidney","type":"exact"},{"name":"renal neoplasm","type":"exact"},{"name":"renal tumor","type":"exact"},{"name":"renal tumors","type":"exact"},{"name":"renal tumour","type":"exact"},{"name":"renal tumours","type":"exact"},{"name":"tumor of kidney","type":"exact"},{"name":"tumor of the kidney","type":"exact"},{"name":"tumour of kidney","type":"exact"},{"name":"tumour of the kidney","type":"exact"}],"termid":"MONDO:0021163","terms_by_termid":{"MONDO:0003789":null,"MONDO:0007763":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0021163"}}}


id: MONDO:0021049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the vulva. Representative examples include Bartholin gland adenoma, vulvar nodular hidradenoma, vulvar carcinoma, and vulvar melanoma.","definition_xrefs":["NCIT:C3443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar disease","termid":"MONDO:0002187"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar neoplasm","secondary_identifiers":["ICD9:239.5","MEDGEN:22689","UMLS:C0042995","SCTID:126922007"],"synonyms":[{"name":"mammalian vulva neoplasm","type":"exact"},{"name":"mammalian vulva neoplasm (disease)","type":"exact"},{"name":"mammalian vulva tumor","type":"exact"},{"name":"mammalian vulva tumour","type":"exact"},{"name":"neoplasm of mammalian vulva","type":"exact"},{"name":"neoplasm of the vulva","type":"exact"},{"name":"neoplasm of vulva","type":"exact"},{"name":"tumor of mammalian vulva","type":"exact"},{"name":"tumor of the vulva","type":"exact"},{"name":"tumor of vulva","type":"exact"},{"name":"tumour of mammalian vulva","type":"exact"},{"name":"tumour of the vulva","type":"exact"},{"name":"tumour of vulva","type":"exact"},{"name":"vulva neoplasm","type":"exact"},{"name":"vulva tumor","type":"exact"},{"name":"vulva tumour","type":"exact"},{"name":"vulval neoplasm","type":"exact"},{"name":"vulvar neoplasm","type":"exact"},{"name":"vulvar tumor","type":"exact"},{"name":"vulvar tumour","type":"exact"}],"termid":"MONDO:0021049","xrefs":{"Monarch":{"xref_id":"0021049"}}}


id: PBO:0085582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 7-aminocholesterol resistance; has seven potential membrane-spanning regions; expression is induced under both low-heme and low-oxygen conditions; member of the fungal lipid-translocating exporter (LTE) family of protein; RTA1 has a paralog, YLR046C, that arose from the whole genome duplication","termid":"PBO:0085582"}


id: MONDO:0012573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vesicoureteral reflux in which the cause of the disease is a mutation in the ROBO2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux 2","secondary_identifiers":["UMLS:C1970483","OMIM:610878","MESH:C567053","MEDGEN:370270","GARD:18419"],"synonyms":[{"name":"ROBO2 vesicoureteral reflux (disease)","type":"exact"},{"name":"VUR2","type":"related"},{"name":"vesicoureteral reflux (disease) caused by mutation in ROBO2","type":"exact"},{"name":"vesicoureteral reflux 2","type":"exact"},{"name":"vesicoureteral reflux type 2","type":"exact"}],"termid":"MONDO:0012573","xrefs":{"Monarch":{"xref_id":"0012573"}}}


id: PBO:0047766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOSL1 pseudogene 1","termid":"PBO:0047766"}


id: PBO:0028362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell_in_stationary_phase","termid":"PBO:0028362"}


id: MONDO:0008177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm in which there is infiltration of the skin by neoplastic large cells with abundant pale cytoplasm and large nuclei with prominent nucleoli (Paget cells). It may affect the anus, penis, scrotum, and vulva.","definition_xrefs":["NCIT:C3302"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"Paget disease","termid":"MONDO:0021165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extramammary Paget disease","secondary_identifiers":["ICDO:8542/3","MedDRA:10068223","UMLS:C0030186","MedDRA:10033366","MEDGEN:45280","OMIM:167300","Orphanet:2800","GARD:4192","MESH:D010145","icd11.foundation:1796624917","ONCOTREE:EMPD","EFO:1000249"],"synonyms":[{"name":"EMPD","type":"related"},{"name":"Extramammary Paget's disease","type":"exact"},{"name":"Paget disease Extramammary","type":"exact"},{"name":"Paget disease, EXTRAMAMMARY","type":"related"},{"name":"Paget's disease of skin","type":"exact"},{"name":"Paget's disease of the skin","type":"exact"},{"name":"Paget's skin disease","type":"exact"},{"name":"cutaneous Paget's disease","type":"related"},{"name":"extramammary Paget disease","type":"exact"}],"termid":"MONDO:0008177","xrefs":{"Monarch":{"xref_id":"0008177"}}}


id: PBO:0074235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 48 member 1","termid":"PBO:0074235"}


id: GO:1901685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutathione derivative.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"glutathione derivative metabolic process","synonyms":[{"name":"glutathione derivative metabolism","type":"exact"}],"termid":"GO:1901685"}


id: PBO:0087443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit H of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; serves as an activator or a structural stabilizer of the V-ATPase; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087443"}


id: PBO:0087515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved single-stranded DNA binding protein complex involved in DNA replication, repair, recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; with Sgs1p-Top2p-Rmi1p, stimulates DNA catenation/decatenation activity of Top3p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087515"}


id: PBO:0017718
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Kinesin Like protein","termid":"PBO:0017718"}


id: PBO:0043991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate N-acetylgalactosaminyltransferase 1","termid":"PBO:0043991"}


id: GO:0047181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzoyl-CoA + 3 malonyl-CoA = 3 CO2 + 2,3',4,6-tetrahydroxybenzophenone + 4 coenzyme A.","definition_xrefs":["EC:2.3.1.151","MetaCyc:2.3.1.151-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tetrahydroxybenzophenone synthase activity","secondary_identifiers":["RHEA:19305"],"synonyms":[{"name":"malonyl-CoA:3-hydroxybenzoyl-CoA malonyltransferase activity","type":"related"}],"termid":"GO:0047181"}


id: GO:0000756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus regulating the process of conjugation without cellular fusion.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"cellular response to pheromone","termid":"GO:0071444"},{"relation_name":"regulates","term_name":"conjugation with mutual genetic exchange","termid":"GO:0000748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pheromone regulating conjugation with mutual genetic exchange","synonyms":[{"name":"response to pheromone triggering conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000756"}


id: GO:0035483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the liquid and liquid-suspended solid contents of the stomach exit through the pylorus into the duodenum.","definition_xrefs":["ISBN:9781416032458","GOC:cy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric motility","termid":"GO:0035482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastric emptying","termid":"GO:0035483"}


id: GO:0035844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cloaca over time, from it's formation to the mature structure. The cloaca is the common chamber into which intestinal, genital and urinary canals open in vertebrates.","definition_xrefs":["GOC:dgh","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"urogenital system development","termid":"GO:0001655"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cloaca development","synonyms":[{"name":"cloacal development","type":"exact"}],"termid":"GO:0035844"}


id: MONDO:0001020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Decreased vision that results from abnormal visual development.","definition_xrefs":["NCIT:C118764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder","termid":"MONDO:0021084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amblyopia","secondary_identifiers":["MEDGEN:8009","ICD9:368.00","MESH:D000550","HP:0000646","CSP:1114-9655","SCTID:387742006","DOID:10376","UMLS:C0002418"],"synonyms":[{"name":"amblyopia","type":"exact"},{"name":"amblyopia (disease)","type":"exact"},{"name":"lazy eye","type":"related"}],"termid":"MONDO:0001020","xrefs":{"Monarch":{"xref_id":"0001020"}}}


id: PBO:0084337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore checkpoint WD40 repeat protein; localizes to kinetochores during prophase and metaphase, delays anaphase in the presence of unattached kinetochores; forms complexes with Mad1p-Bub1p and with Cdc20p, binds Mad2p and Mad3p; functions at kinetochore to activate APC/C-Cdc20p for normal mitotic progression","termid":"PBO:0084337"}


id: PBO:0058128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4430","termid":"PBO:0058128"}


id: MONDO:0003073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trilateral retinoblastoma refers to bilateral (or less often unilateral) retinoblastoma associated with an intracranial primitive neuroectodermal tumor in the pineal or suprasellar region. This syndrome is often associated with a increased familial incidence of retinoblastoma. (From Cancer 86(1): 135-141, 1999).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"trilateral retinoblastoma","secondary_identifiers":["UMLS:C2608045","MEDGEN:392856","DOID:4647","NCIT:C7019"],"termid":"MONDO:0003073","xrefs":{"Monarch":{"xref_id":"0003073"}}}


id: GO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a lumen by hollowing out a solid rod or cord.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube formation","termid":"GO:0035148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube lumen cavitation","termid":"GO:0060605"}


id: GO:0051415
data:
  {"annotated_genes":["SJAG_01756","SJAG_07018","SJAG_02761","SJAG_00856","SJAG_02886","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99576,99875,100479,105915,116389,116632],"is_not":false,"summary":null,"term":"GO:0051415"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule by the interphase microtubule organizing center during interphase, the stage of cell cycle between successive rounds of chromosome segregation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"microtubule nucleation by interphase microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IMTOC-mediated microtubule nucleation during interphase","type":"exact"},{"name":"interphase microtubule nucleation by interphase microtubule organising centre","type":"exact"},{"name":"interphase microtubule nucleation by interphase microtubule organizing center","type":"exact"},{"name":"interphase microtubule organizing center-mediated microtubule nucleation during interphase","type":"exact"},{"name":"microtubule nucleation during interphase by IMTOC","type":"exact"},{"name":"microtubule nucleation during interphase by interphase microtubule organizing center","type":"exact"}],"termid":"GO:0051415","terms_by_termid":{"GO:0051415":null}}


