# terms

id: PBO:0076130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 1","termid":"PBO:0076130"}


id: GO:0007434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination in an adult organism of where the salivary gland forms, the total number of salivary gland cells and how many cells are allocated to each of the specialised cell types within the salivary gland.","definition_xrefs":["PMID:11598957","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult salivary gland boundary specification","synonyms":[{"name":"larval salivary gland determination","type":"broad"}],"termid":"GO:0007434"}


id: SO:0000670
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence within the micronuclear DNA of ciliates at which chromosome breakage and telomere addition occurs during nuclear differentiation.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_rearrangement_feature","termid":"SO:0000669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_breakage_sequence","synonyms":[{"name":"chromosome breakage sequence","type":"exact"}],"termid":"SO:0000670"}


id: MONDO:1012311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor neuron disease, non-human animal","termid":"MONDO:1011868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neuron disease, dog","secondary_identifiers":["OMIA:001165-9615"],"termid":"MONDO:1012311","xrefs":{"Monarch":{"xref_id":"1012311"}}}


id: MONDO:1011475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis multiplex congenita that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita, non-human animal","termid":"MONDO:1011455"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita, pig","secondary_identifiers":["OMIA:001465-9823"],"termid":"MONDO:1011475","xrefs":{"Monarch":{"xref_id":"1011475"}}}


id: GO:0018747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-1,2-oxide + H2O = trans-1,2-dihydrodiolphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-1,2-epoxide hydrolase activity (obsolete GO:0018747)","termid":"GO:0018747"}


id: GO:0062069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GARP complex.","definition_xrefs":["PMID:20163565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GARP complex binding","termid":"GO:0062069"}


id: GO:1905085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bioluminescence.","definition_xrefs":["GO_REF:0000058","GOC:rph","PMID:10913092","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"bioluminescence","termid":"GO:0008218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bioluminescence","termid":"GO:1905085"}


id: PBO:0017851
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leukodystrophy","termid":"PBO:0017851"}


id: PBO:0068561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 12, pseudogene","termid":"PBO:0068561"}


id: GO:0097658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear ubiquitin ligase multiprotein complex located in the inner nuclear membrane (INM) that recognizes and ubiquitinates misfolded INM proteins and also some proteins involved in sterol biosynthesis, during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligases Asi1p and Asi3p.","definition_xrefs":["GOC:mcc","PMID:25236469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"nuclear inner membrane","termid":"GO:0005637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Asi complex","termid":"GO:0097658"}


id: MONDO:0015754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cylindrical spirals myopathy (obsolete MONDO:0015754)","termid":"MONDO:0015754","xrefs":{"Monarch":{"xref_id":"0015754"}}}


id: PBO:0077973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon CGC) 1-1","termid":"PBO:0077973"}


id: PBO:0086777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; identified based on homology to <i>Ashbya gossypii</i>","termid":"PBO:0086777"}


id: GO:0006419
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990762"},{"annotations":[93222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"}]},"cv_name":"biological_process","definition":"The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. The alanyl-tRNA synthetase is a class-II synthetases. The activated amino acid is transferred to the 3'-OH group of an alanine accetping tRNA.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"alanyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006419","terms_by_termid":{"GO:0070143":null,"GO:1990762":null}}


id: MONDO:0017676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete marginal papular palmoplantar keratoderma (obsolete MONDO:0017676)","secondary_identifiers":["Orphanet:307995"],"synonyms":[{"name":"marginal papular palmoplantar hyperkeratosis","type":"exact"}],"termid":"MONDO:0017676","xrefs":{"Monarch":{"xref_id":"0017676"}}}


id: PBO:0054549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1949","termid":"PBO:0054549"}


id: PBO:0030724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_membrane_organization","termid":"PBO:0030724"}


id: PBO:0111744
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-fungal Zn(2)-Cys(6) binuclear cluster domain","termid":"PBO:0111744"}


id: PBO:0065470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 10 pseudogene 1","termid":"PBO:0065470"}


id: PBO:0007918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved ATP binding protein, implicated in sister chromatid cohesion","termid":"PBO:0007918"}


id: GO:0039602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a host DNA template. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:1316611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host transcription initiation from RNA polymerase II promoter","secondary_identifiers":["VZ:904","GO:0039601"],"synonyms":[{"name":"inhibition of host transcription initiation by virus","type":"narrow"},{"name":"suppression by virus of host DNA-dependent transcription, initiation","type":"narrow"},{"name":"suppression by virus of host transcription initiation from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0039602"}


id: PBO:0038353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stem_parasite_of","termid":"PBO:0038353"}


id: MONDO:0005029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic myeloproliferative neoplasm that involves primarily the megakaryocytic lineage. It is characterized by sustained thrombocytosis in the blood, increased numbers of large, mature megakaryocytes in the bone marrow, and episodes of thrombosis and/or hemorrhage. (WHO, 2008)","definition_xrefs":["NCIT:C3407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytosis disease","termid":"MONDO:0002249"},{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"essential thrombocythemia","secondary_identifiers":["DOID:2224","MESH:D013920","MEDGEN:11797","UMLS:C0040028","NANDO:2200655","MedDRA:10015493","SCTID:109994006","GARD:6594","NANDO:2100194","ICDO:9962/3","NORD:1110","ONCOTREE:ET","ICD9:238.71","Orphanet:3318","EFO:0000479"],"synonyms":[{"name":"ET","type":"broad"},{"name":"essential thrombocytemia","type":"exact"},{"name":"essential thrombocythaemia","type":"exact"},{"name":"essential thrombocythemia","type":"exact"},{"name":"essential thrombocytosis","type":"exact"},{"name":"hemorrhagic thrombocythemia","type":"exact"},{"name":"idiopathic thrombocythemia","type":"narrow"},{"name":"primary thrombocythemia","type":"exact"},{"name":"primary thrombocytosis","type":"exact"}],"termid":"MONDO:0005029","xrefs":{"Monarch":{"xref_id":"0005029"}}}


id: GO:1902510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic DNA fragmentation.","definition_xrefs":["GOC:hjd","GOC:TermGenie","PMID:15572351","PMID:15723341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA catabolic process","termid":"GO:1903624"},{"relation_name":"regulates","term_name":"apoptotic DNA fragmentation","termid":"GO:0006309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic DNA fragmentation","synonyms":[{"name":"regulation of DNA catabolic process during apoptosis","type":"exact"},{"name":"regulation of DNA catabolism during apoptosis","type":"exact"},{"name":"regulation of DNA fragmentation","type":"broad"},{"name":"regulation of DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"regulation of chromatinolysis","type":"broad"},{"name":"regulation of endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"}],"termid":"GO:1902510"}


id: PBO:0028944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutathione_synthase_activity","termid":"PBO:0028944"}


id: GO:0102695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cis-zeatin = H+ + cis-zeatin-7-N-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:cis-zeatin 7-N-glucosyltransferase activity (obsolete GO:0102695)","termid":"GO:0102695"}


id: GO:0033943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in (1->3)-beta-D-galactopyranans.","definition_xrefs":["EC:3.2.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-galactosidase activity","termid":"GO:0004565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"galactan 1,3-beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.145-RXN"],"synonyms":[{"name":"galactan (1,3)-beta-D-galactosidase activity","type":"related"},{"name":"galactan (1->3)-beta-D-galactosidase activity","type":"related"}],"termid":"GO:0033943"}


id: PBO:0076480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane anterior posterior transformation 1","termid":"PBO:0076480"}


id: PBO:0063578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PERP pseudogene 1","termid":"PBO:0063578"}


id: SO:0001942
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 20th residue (a lysine), from the start of the H2B histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2B_acetylation_site","termid":"SO:0002143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK20_acetylation_site","synonyms":[{"name":"H2BK20 acetylation site","type":"exact"},{"name":"H2BK20ac","type":"exact"}],"termid":"SO:0001942"}


id: GO:2000533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renal albumin absorption.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of renal albumin absorption","termid":"GO:2000532"},{"relation_name":"negatively_regulates","term_name":"renal albumin absorption","termid":"GO:0097018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal albumin absorption","termid":"GO:2000533"}


id: MOD:00528
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["Unimod:160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 glycosylated residue","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:00528"}


id: GO:0035763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the dorsal motor nucleus of the vagus nerve. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve morphogenesis","termid":"GO:0035762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve structural organization","synonyms":[{"name":"dorsal motor nucleus of vagus nerve structural organisation","type":"exact"}],"termid":"GO:0035763"}


id: PATO:0000307
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000307 relative age value (obsolete PATO:0000307)","termid":"PATO:0000307"}


id: PBO:0067184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 242, pseudogene","termid":"PBO:0067184"}


id: PBO:0090241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase Mri1","termid":"PBO:0090241"}


id: PR:Q09746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-BAR and double SH3 domains protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein BZZ1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.05c","secondary_identifiers":["UniProtKB:Q09746"],"synonyms":[{"name":"SPBC12C2.05c","type":"related"},{"name":"Spom972h-FCHSD1","type":"exact"}],"termid":"PR:Q09746"}


id: PBO:0068035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 340","termid":"PBO:0068035"}


id: GO:0019101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotypes in a female organism's soma.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic sex determination","termid":"GO:0018993"},{"relation_name":"is_a","term_name":"female sex determination","termid":"GO:0030237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female somatic sex determination","termid":"GO:0019101"}


id: MONDO:0006214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonencapsulated variant of papillary carcinoma of the thyroid gland characterized by the predominance of follicular structures. The malignant follicular cells display the nuclear features that characterize the papillary adenocarcinomas of the thyroid gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"follicular variant thyroid gland papillary carcinoma","secondary_identifiers":["UMLS:C3714651","MEDGEN:811427","EFO:1000261","NCIT:C126594"],"synonyms":[{"name":"FVPTC","type":"exact"}],"termid":"MONDO:0006214","xrefs":{"Monarch":{"xref_id":"0006214"}}}


id: PBO:0069295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 551, pseudogene","termid":"PBO:0069295"}


id: PBO:0053674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 857","termid":"PBO:0053674"}


id: MONDO:0023595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotonic dystrophy that is present at birth.","definition_xrefs":["NCIT:C123308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"myotonic dystrophy","termid":"MONDO:0016107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital myotonic dystrophy","secondary_identifiers":["MEDGEN:98051","icd11.foundation:599230687","UMLS:C0410226","GARD:9134"],"synonyms":[{"name":"Congenital Myotonic dystrophies","type":"related"},{"name":"Congenital Myotonic dystrophy","type":"related"},{"name":"Congenital myotonic dystrophy","type":"related"},{"name":"MYOTONIC dystrophy CONGEN","type":"related"},{"name":"Myotonic dystrophies, Congenital","type":"related"},{"name":"Myotonic dystrophy, Congenital","type":"related"},{"name":"congenital myotonic dystrophy","type":"exact"},{"name":"dystrophies, Congenital Myotonic","type":"related"},{"name":"dystrophy, Congenital Myotonic","type":"related"}],"termid":"MONDO:0023595","xrefs":{"Monarch":{"xref_id":"0023595"}}}


id: FYPO:0000522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisomal transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal peroxisomal transport","synonyms":[{"name":"abnormal peroxisomal transport during mitotic cell cycle","type":"related"},{"name":"abnormal peroxisomal transport during vegetative growth","type":"exact"},{"name":"peroxisomal transport: abnormal","type":"related"}],"termid":"FYPO:0000522"}


id: PBO:0036178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_cell_during_nitrogen_starvation","termid":"PBO:0036178"}


id: GO:0097306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alcohol stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to alcohol","termid":"GO:0097306"}


id: MONDO:0020100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare hemolytic anemia.","gene_count":0,"genotype_count":0,"name":"obsolete rare hemolytic anemia (obsolete MONDO:0020100)","secondary_identifiers":["Orphanet:98363"],"synonyms":[{"name":"rare hemolytic anemia","type":"exact"}],"termid":"MONDO:0020100","xrefs":{"Monarch":{"xref_id":"0020100"}}}


id: PBO:0066432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RERG like","termid":"PBO:0066432"}


id: MONDO:0000540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the small intestine. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C4638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0002995"},{"relation_name":"is_a","term_name":"intestinal neuroendocrine tumor G1","termid":"MONDO:0021533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestinal neuroendocrine tumor G1","secondary_identifiers":["UMLS:C0349536","MEDGEN:91150","SCTID:276818002","DOID:0050925"],"synonyms":[{"name":"carcinoid tumor of small bowel","type":"exact"},{"name":"carcinoid tumor of small intestine","type":"exact"},{"name":"carcinoid tumor of the small bowel","type":"exact"},{"name":"carcinoid tumor of the small intestine","type":"exact"},{"name":"carcinoid tumour of small bowel","type":"exact"},{"name":"carcinoid tumour of small intestine","type":"exact"},{"name":"carcinoid tumour of the small bowel","type":"exact"},{"name":"carcinoid tumour of the small intestine","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of small intestine","type":"exact"},{"name":"small bowel carcinoid tumor","type":"exact"},{"name":"small bowel carcinoid tumour","type":"exact"},{"name":"small intestinal NET G1","type":"exact"},{"name":"small intestinal carcinoid tumor","type":"exact"},{"name":"small intestinal carcinoid tumour","type":"exact"},{"name":"small intestinal neuroendocrine tumor G1","type":"exact"},{"name":"small intestine NET G1","type":"exact"},{"name":"small intestine carcinoid neuroendocrine tumor","type":"related"},{"name":"small intestine carcinoid neuroendocrine tumour","type":"related"},{"name":"small intestine carcinoid tumor","type":"exact"},{"name":"small intestine carcinoid tumor (disease)","type":"exact"},{"name":"small intestine carcinoid tumour","type":"exact"},{"name":"small intestine carcinoid tumour (disease)","type":"exact"},{"name":"small intestine neuroendocrine neoplasm G1","type":"exact"},{"name":"small intestine neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0000540","xrefs":{"Monarch":{"xref_id":"0000540"}}}


id: MONDO:1012159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, goat","secondary_identifiers":["OMIA:000631-9925"],"termid":"MONDO:1012159","xrefs":{"Monarch":{"xref_id":"1012159"}}}


id: PBO:0067244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 317, pseudogene","termid":"PBO:0067244"}


id: PBO:0111301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Prp39","termid":"PBO:0111301"}


id: PBO:0053196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and EF-hand containing transmembrane protein 2","termid":"PBO:0053196"}


id: GO:0006852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial sodium/calcium ion exchange (obsolete GO:0006852)","synonyms":[{"name":"mitochondrial sodium/calcium exchange","type":"exact"},{"name":"mitochondrial sodium/calcium ion exchange","type":"exact"}],"termid":"GO:0006852"}


id: GO:0005371
data:
  {"annotated_genes":["SJAG_00275","SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111712],"is_not":false,"summary":null,"term":"GO:0005371"},{"annotations":[91290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of tricarboxylate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"tricarboxylate secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005370"],"synonyms":[{"name":"tricarboxylate carrier activity","type":"exact"}],"termid":"GO:0005371","terms_by_termid":{"GO:0005371":null,"GO:0071913":null}}


id: FYPO:0002578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of hydroxyurea than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to hydroxyurea","synonyms":[{"name":"resistance to HU","type":"exact"},{"name":"resistance to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"resistance to hydroxyurea during vegetative growth","type":"exact"},{"name":"resistant to hydroxyurea","type":"exact"}],"termid":"FYPO:0002578"}


id: PATO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A life span which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"life span","termid":"PATO:0000050"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased life span","synonyms":[{"name":"low life span","type":"exact"}],"termid":"PATO:0001604"}


id: MONDO:0008906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete carbimazole sensitivity (obsolete MONDO:0008906)","secondary_identifiers":["OMIM:212060"],"synonyms":[{"name":"carbimazole sensitivity","type":"exact"}],"termid":"MONDO:0008906","xrefs":{"Monarch":{"xref_id":"0008906"}}}


id: GO:0006164
data:
  {"annotated_genes":["SJAG_01298","SJAG_00044","SJAG_03140","SJAG_03298","SJAG_00133","SJAG_02618","SJAG_00915","SJAG_00964","SJAG_04882","SJAG_01471","SJAG_04122","SJAG_00542","SJAG_03925","SJAG_04693","SJAG_03114","SJAG_02105","SJAG_01859","SJAG_01359","SJAG_03946","SJAG_00836","SJAG_01661","SJAG_01566","SJAG_MIT09","SJAG_02364","SJAG_07003","SJAG_02887","SJAG_04681","SJAG_03811","SJAG_04970","SJAG_02038","SJAG_01582","SJAG_MIT15","SJAG_01500","SJAG_03355","SJAG_02850","SJAG_01814","SJAG_01070","SJAG_06634","SJAG_02598","SJAG_04634","SJAG_MIT37","SJAG_05204","SJAG_04849","SJAG_02564","SJAG_04123","SJAG_02889","SJAG_01081","SJAG_00985","SJAG_00957","SJAG_00438","SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88398,97211,109381,114401],"is_not":false,"summary":null,"term":"GO:0006164"},{"annotations":[102905,88394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[97304,109816,118415,99071,113949,116796,102906,109705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[97627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[93039,116283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[107731,59212,100684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[93255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[99565,101727,107732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[118416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[93257,101304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[90584,112533,90165,98842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[116742,99557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[88533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[91427,96975,95958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[66921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[115289,103138,118504,94347,107275,102520,88642,107367,108247,118493,92358,118499,104476,93370,101308,103167,92784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[109818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009152"},{"annotations":[117440],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[93259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00957":null,"SJAG_00964":null,"SJAG_00985":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01359":null,"SJAG_01471":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02364":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02618":null,"SJAG_02850":null,"SJAG_02887":null,"SJAG_02889":null,"SJAG_03114":null,"SJAG_03140":null,"SJAG_03298":null,"SJAG_03355":null,"SJAG_03811":null,"SJAG_03925":null,"SJAG_03946":null,"SJAG_04122":null,"SJAG_04123":null,"SJAG_04422":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04693":null,"SJAG_04849":null,"SJAG_04882":null,"SJAG_04970":null,"SJAG_05204":null,"SJAG_06634":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine 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id: GO:0050635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methylanthranilyl-CoA + 3 H+ + 3 malonyl-CoA = 1,3-dihydroxy-N-methylacridone + 3 CO2 + 4 CoA + H2O.","definition_xrefs":["EC:2.3.1.159","RHEA:22224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"acridone synthase activity","secondary_identifiers":["KEGG_REACTION:R07250","MetaCyc:2.3.1.159-RXN"],"synonyms":[{"name":"malonyl-CoA:N-methylanthraniloyl-CoA malonyltransferase (cyclizing)","type":"related"}],"termid":"GO:0050635"}


id: PBO:0017432
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-temporally_related_to","termid":"PBO:0017432"}


id: FYPO:0002917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"},{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"},{"relation_name":"is_a","term_name":"abolished protein lysine methylation during vegetative growth","termid":"FYPO:0004488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 methylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002917"}


id: PBO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin","termid":"PBO:0002496"}


id: GO:0007296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of yolk. Yolk is a mixture of materials used for embryonic nutrition.","definition_xrefs":["GOC:dph","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm organization","termid":"GO:0007028"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vitellogenesis","secondary_identifiers":["Wikipedia:Vitellogenesis"],"synonyms":[{"name":"yolk formation","type":"exact"},{"name":"yolk production","type":"exact"}],"termid":"GO:0007296"}


id: GO:0072196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"part_of","term_name":"pronephric nephron development","termid":"GO:0039019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in pronephric nephron development","synonyms":[{"name":"pronephros proximal/distal pattern formation","type":"exact"}],"termid":"GO:0072196"}


id: MONDO:0009908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pterin-4 alpha-carbinolamine dehydratase 1 (PCBD1) deficiency is considered a transient and benign form of hyperphenylalaninemia due to tetrahydrobiopterin deficiency, characterized by muscular hypotonia, irritability (detected by EEG), slow acquisition of psychomotor skills, age-dependent movement disorders, including dystonia and an accompanying excretion of 7-substituted pterins. Neurological development is normal with dietary control of blood phenyalanine. PCBD1 is inherited in an autosomal recessive manner.","definition_xrefs":["Orphanet:1578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphenylalaninemia due to tetrahydrobiopterin deficiency","termid":"MONDO:0016543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0006025"],"is_obsolete":false,"name":"pterin-4 alpha-carbinolamine dehydratase 1 deficiency","secondary_identifiers":["MESH:C538382","OMIM:264070","GARD:2843","UMLS:C1849700","ICD9:277.6","DOID:0081131","SCTID:124646004","MEDGEN:337890"],"synonyms":[{"name":"CADH deficiency","type":"exact"},{"name":"HPABH4D","type":"related"},{"name":"PCBD deficiency","type":"exact"},{"name":"PCBD1 deficiency","type":"exact"},{"name":"PCD deficiency","type":"exact"},{"name":"dehydratase deficiency","type":"exact"},{"name":"hyperphenylalaninemia due to dehydratase deficiency","type":"exact"},{"name":"hyperphenylalaninemia due to pterin-4-alpha-carbinolamine dehydratase deficiency","type":"exact"},{"name":"hyperphenylalaninemia with primapterinuria","type":"exact"},{"name":"hyperphenylalaninemia, BH4-deficient, D","type":"related"},{"name":"hyperphenylalaninemia, Bh4-deficient, type D","type":"exact"},{"name":"hyperphenylalaninemia, tetrahydrobiopterin-deficient, due to pterin-4-Alpha-carbinolamine dehydratase deficiency","type":"related"},{"name":"pterin-4 alpha-carbinolamine dehydratase 1 deficiency","type":"exact"},{"name":"pterin-4 alpha-carbinolamine dehydratase deficiency","type":"related"},{"name":"tetrahydrobiopterin (BH4)-deficient hyperphenylalaninemia (HPA) due to pterin-4-alpha-carbinolamine dehydratase deficiency","type":"related"}],"termid":"MONDO:0009908","xrefs":{"Monarch":{"xref_id":"0009908"}}}


id: PBO:0075501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and centriole associated 1","termid":"PBO:0075501"}


id: MONDO:0007230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachymorphism-onychodysplasia-dysphalangism (BOD) is a very rare malformation syndrome that is characterized by short stature, hypoplastic fifth digits with tiny dysplastic nails, facial dysmorphism with coarse features including a wide mouth and broad nose, and mild intellectual disability. It has been suggested that Coffin-Siris syndrome and BOD syndrome are perhaps allelic variants.","definition_xrefs":["Orphanet:1292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brachymorphism-onychodysplasia-dysphalangism syndrome","secondary_identifiers":["SCTID:720573009","GARD:918","MESH:C536242","UMLS:C1862082","OMIM:113477","MEDGEN:350585"],"synonyms":[{"name":"Brachymorphism onychodysplasia dysphalangism syndrome","type":"related"},{"name":"Brachymorphism-onychodysplasia-dysphalangism syndrome","type":"exact"},{"name":"Senior syndrome","type":"exact"},{"name":"bod syndrome","type":"exact"}],"termid":"MONDO:0007230","xrefs":{"Monarch":{"xref_id":"0007230"}}}


id: PBO:0067529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 673, pseudogene","termid":"PBO:0067529"}


id: PBO:0074182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 4","termid":"PBO:0074182"}


id: GO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splicing of Group III introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group III introns, that is involved in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions begun by a bulged adenosine residue within the intron sequence as the initiating nucleophile. The intron is excised as a lariat. Though very similar in structure and mechanism to Group II introns, Group III introns are smaller and more streamlined and the splice site consensus sequences are not as well conserved.","definition_xrefs":["GOC:krc","PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","termid":"GO:0000377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"Group III intron splicing","synonyms":[{"name":"mRNA splicing","type":"related"}],"termid":"GO:0000374"}


id: PBO:0005147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-nucleosidyl)-tetraphosphatase","termid":"PBO:0005147"}


id: PBO:0069309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 565, pseudogene","termid":"PBO:0069309"}


id: GO:0044738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism negatively regulates the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of acid-sensing ion channel in another organism","termid":"GO:0044737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acid-sensing ion channel in another organism","synonyms":[{"name":"negative regulation of ASIC channel in other organism","type":"exact"},{"name":"negative regulation of acid-sensing ion channel in other organism","type":"exact"}],"termid":"GO:0044738"}


id: PBO:0046875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3D antisense RNA 1","termid":"PBO:0046875"}


id: MONDO:0015417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tessier number 6 facial cleft","secondary_identifiers":["GARD:19969","MEDGEN:609365","Orphanet:141265","UMLS:C0432120","icd11.foundation:1934815559"],"termid":"MONDO:0015417","xrefs":{"Monarch":{"xref_id":"0015417"}}}


id: GO:0015205
data:
  {"annotated_genes":["SJAG_02147","SJAG_03777","SJAG_04714","SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77625],"is_not":false,"summary":null,"term":"GO:0015205"},{"annotations":[111991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015207"},{"annotations":[111992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015208"},{"annotations":[87962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015210"},{"annotations":[87963,95041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"},{"annotations":[87952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042907"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acidfrom one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02147":null,"SJAG_03777":null,"SJAG_04714":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nucleobase transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015392"],"termid":"GO:0015205","terms_by_termid":{"GO:0015205":null,"GO:0015207":null,"GO:0015208":null,"GO:0015210":null,"GO:0015505":null,"GO:0042907":null}}


id: PBO:0082641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of inositol phosphorylceramide (IPC) synthase; forms a complex with Aur1p and regulates its activity; required for IPC synthase complex localization to the Golgi; post-translationally processed by Kex2p; KEI1 is an essential gene","termid":"PBO:0082641"}


id: SO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A location where a gene is rearranged due to recombination during mitosis or meiosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_feature_of_rearranged_gene","synonyms":[{"name":"recombination feature of rearranged gene","type":"exact"}],"termid":"SO:0000300"}


id: GO:1901148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any gene expression that is involved in extracellular matrix organization. Gene expression includes both transcription to produce an RNA transcript, and the translation of that mRNA into protein. Protein maturation is included in gene expression when required to form an active form of a product from an inactive precursor form.","definition_xrefs":["GOC:TermGenie","GOC:pg","PMID:18668558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"},{"relation_name":"part_of","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"gene expression involved in extracellular matrix organization","synonyms":[{"name":"expression of extracellular matrix proteins","type":"exact"},{"name":"extracellular matrix protein production","type":"related"}],"termid":"GO:1901148"}


id: MONDO:0018949
data:
  {"annotated_genes":["SJAG_03703","SJAG_03815","SJAG_02919","SJAG_04567","SJAG_00044","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84789,84788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008050"},{"annotations":[85736,85737,85735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012130"},{"annotations":[85633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014877"}]},"cv_name":"mondo","definition":"Distal myopathy refers to a group of muscle diseases which share the clinical pattern of predominant weakness and atrophy beginning in the feet and/or hands.","definition_xrefs":["Orphanet:599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_02431":null,"SJAG_02919":null,"SJAG_03703":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"distal myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18699","DOID:11720","OMIMPS:160500","SCTID:58795000","icd11.foundation:596283352","MEDGEN:155541","UMLS:C0751336","NCIT:C84675","NANDO:1200216"],"synonyms":[{"name":"Miyoshi muscular dystrophy","type":"narrow"},{"name":"distal muscular dystrophy","type":"exact"},{"name":"distal myopathy","type":"exact"}],"termid":"MONDO:0018949","terms_by_termid":{"MONDO:0008050":null,"MONDO:0012130":null,"MONDO:0014877":null},"xrefs":{"Monarch":{"xref_id":"0018949"}}}


id: MONDO:0000650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the peritoneal cavity. Representative examples include adenomatoid tumor and disseminated peritoneal leiomyomatosis.","definition_xrefs":["NCIT:C8612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"peritoneal neoplasm","termid":"MONDO:0006901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peritoneal benign neoplasm","secondary_identifiers":["DOID:0060117","MEDGEN:141678","UMLS:C0496874"],"synonyms":[{"name":"benign peritoneal neoplasm","type":"exact"},{"name":"peritoneum benign neoplasm","type":"exact"}],"termid":"MONDO:0000650","xrefs":{"Monarch":{"xref_id":"0000650"}}}


id: SO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome duplication involving an insertion from another chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_duplication","termid":"SO:1000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_duplication","synonyms":[{"name":"interchromosomal duplication","type":"exact"}],"termid":"SO:0000457"}


id: FYPO:0003521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-ergothioneine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular L-ergothioneine level","synonyms":[{"name":"decreased L-ergothioneine level","type":"exact"},{"name":"decreased cellular L-ergothioneine accumulation","type":"related"},{"name":"reduced cellular L-ergothioneine level","type":"exact"}],"termid":"FYPO:0003521"}


id: PBO:0051754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate kinase 3","termid":"PBO:0051754"}


id: GO:0048457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the floral whorl are generated and organized.","definition_xrefs":["GOC:go_curators","GOC:PO_curators","PO:0025023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"floral whorl development","termid":"GO:0048438"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral whorl morphogenesis","secondary_identifiers":["GO:0048414"],"termid":"GO:0048457"}


id: PBO:0005349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S37 (predicted)","termid":"PBO:0005349"}


id: PATO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An anterior-posterior diameter quality which is relatively small.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased diameter","termid":"PATO:0001715"},{"relation_name":"is_a","term_name":"anterior-posterior diameter","termid":"PATO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased anterior-posterior diameter","synonyms":[{"name":"low anterior-posterior diameter","type":"exact"}],"termid":"PATO:0002042"}


id: PBO:0062475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily G member 3","termid":"PBO:0062475"}


id: PBO:0034185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acquires_nutrients_from","termid":"PBO:0034185"}


id: GO:0031421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex formed by a recombinase, a regulatory protein, and the DNA sequences bound by each protein; catalyzes a reversible site-specific recombination reaction that results in the alternate expression of one or more genes in various contexts.","definition_xrefs":["PMID:11114897","PMID:9732277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"invertasome","termid":"GO:0031421"}


id: GO:0007041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances into, out of or within a lysosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lysosomal transport","termid":"GO:0007041"}


id: PBO:0085738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription initiation; acts at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf1p; protein abundance increases in response to DNA replication stress; BDF2 has a paralog, BDF1, that arose from the whole genome duplication","termid":"PBO:0085738"}


id: _global:trans_spliced_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_spliced_to","termid":"_global:trans_spliced_to"}


id: GO:0080005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Adjustment of Photosystem I/Photosystem II ratio in response to light conditions. The function of photosystem stoichiometry adjustment is to compensate for any deficiency in energy conversion at either photosystem I or photosystem II by increasing the quantity the photosystem that will otherwise become the rate-limiting to overall photosynthesis.","definition_xrefs":["PMID:11607105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photosystem stoichiometry adjustment","termid":"GO:0080005"}


id: GO:0050439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + glyoxylate + H+ = 2-hydroxy-3-oxoadipate + CO2.","definition_xrefs":["RHEA:14341","EC:2.2.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016744","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-3-oxoadipate synthase activity","secondary_identifiers":["KEGG_REACTION:R00474","MetaCyc:2-HYDROXY-3-OXOADIPATE-SYNTHASE-RXN"],"synonyms":[{"name":"2-hydroxy-3-oxoadipate glyoxylate-lyase (carboxylating) activity","type":"related"},{"name":"2-hydroxy-3-oxoadipate synthetase activity","type":"related"},{"name":"2-oxoglutarate:glyoxylate succinaldehydetransferase (decarboxylating)","type":"related"},{"name":"alpha-ketoglutaric-glyoxylic carboligase activity","type":"related"},{"name":"oxoglutarate: glyoxylate carboligase activity","type":"related"},{"name":"oxoglutarate:glyoxylate carboligase activity","type":"related"}],"termid":"GO:0050439"}


id: PBO:0089140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin (HP1) family chromodomain protein Chp2","termid":"PBO:0089140"}


id: GO:0150141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD86 biosynthetic process.","definition_xrefs":["GOC:aruk","PMID:26936882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of CD86 production","termid":"GO:0150140"},{"relation_name":"negatively_regulates","term_name":"CD86 biosynthetic process","termid":"GO:0035781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD86 production","synonyms":[{"name":"negative regulation of CD86 biosynthetic process","type":"exact"}],"termid":"GO:0150141"}


id: GO:0033657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a component of the host cell chloroplast. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by symbiont of host chloroplast part (obsolete GO:0033657)","synonyms":[{"name":"modification by symbiont of host chloroplast part","type":"related"}],"termid":"GO:0033657"}


id: PBO:0061391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 51","termid":"PBO:0061391"}


id: MONDO:0017996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blepharophimosis - intellectual disability syndrome due to UBE3B deficiency (obsolete MONDO:0017996)","secondary_identifiers":["Orphanet:329255","OMIM:615057"],"termid":"MONDO:0017996","xrefs":{"Monarch":{"xref_id":"0017996"}}}


id: PBO:0029733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_papulacandin_D","termid":"PBO:0029733"}


id: PBO:0038923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G5","termid":"PBO:0038923"}


id: MONDO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central neurocytoma (obsolete MONDO:0001900)","termid":"MONDO:0001900","xrefs":{"Monarch":{"xref_id":"0001900"}}}


id: GO:1904161
data:
  {"annotated_genes":["SJAG_04877","SJAG_02818","SJAG_05197","SJAG_00814"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94737,102314,104402,108568],"is_not":false,"summary":null,"term":"GO:1904161"}]},"cv_name":"biological_process","definition":"Any DNA synthesis that is involved in UV-damage excision repair.","definition_xrefs":["GO_REF:0000060","PMID:10704216","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"part_of","term_name":"UV-damage excision repair","termid":"GO:0070914"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00814":null,"SJAG_02818":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"DNA synthesis involved in UV-damage excision repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA synthesis during UV-damage excision repair","type":"related"},{"name":"DNA synthesis during UV-damaged DNA endonuclease-dependent excision repair","type":"related"},{"name":"DNA synthesis during UVDE-dependent excision repair","type":"related"},{"name":"DNA synthesis during UVER","type":"related"},{"name":"DNA synthesis involved in AER","type":"related"},{"name":"DNA synthesis involved in UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"DNA synthesis involved in UVDE-dependent excision repair","type":"exact"},{"name":"DNA synthesis involved in UVER","type":"exact"},{"name":"DNA synthesis involved in alternative excision repair","type":"related"},{"name":"mitotic DNA repair synthesis involved in UV-damage excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UV-damaged DNA endonuclease-dependent excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UVDE-dependent excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UVER","type":"narrow"}],"termid":"GO:1904161","terms_by_termid":{"GO:1904161":null}}


id: GO:0061796
data:
  {"annotated_genes":["SJAG_03915","SJAG_04358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90803,99264],"is_not":false,"summary":null,"term":"GO:0061796"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle process involved in the net addition of membrane at the site of cytokinesis; includes vesicle recruitment and fusion, local lipid synthesis and insertion.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane addition at site of cytokinesis","termid":"GO:0007107"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03915":null,"SJAG_04358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane addition at site of mitotic cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061796","terms_by_termid":{"GO:0061796":null}}


id: GO:0033392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an identical actin monomer to form a homodimer.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete actin homodimerization activity (obsolete GO:0033392)","synonyms":[{"name":"actin dimerization activity","type":"broad"},{"name":"actin homodimerization activity","type":"exact"},{"name":"actin polymerizing activity","type":"related"}],"termid":"GO:0033392"}


id: MONDO:0006428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma occurring in the spleen.","definition_xrefs":["NCIT:C7308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"splenic diffuse large B-cell lymphoma","secondary_identifiers":["EFO:1000547","MEDGEN:412154","UMLS:C2018774"],"synonyms":[{"name":"primary splenic diffuse large B-cell lymphoma","type":"exact"},{"name":"splenic diffuse large B-cell lymphoma","type":"exact"}],"termid":"MONDO:0006428","xrefs":{"Monarch":{"xref_id":"0006428"}}}


id: PBO:0045597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 8 (pseudogene)","termid":"PBO:0045597"}


id: PBO:0054792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2205","termid":"PBO:0054792"}


id: PBO:0031479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_internalization","termid":"PBO:0031479"}


id: PBO:0015246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 (predicted)","termid":"PBO:0015246"}


id: PBO:0083313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF COA1/YIL157C","termid":"PBO:0083313"}


id: PBO:0081264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF32 antisense RNA 2","termid":"PBO:0081264"}


id: PBO:0038958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADIRF antisense RNA 1","termid":"PBO:0038958"}


id: PBO:0064390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 12","termid":"PBO:0064390"}


id: PBO:0110828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type, Loz1","termid":"PBO:0110828"}


id: PBO:0071045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 47","termid":"PBO:0071045"}


id: PR:Q9US28
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1783.01 gene.","definition_xrefs":["UniProtKB:Q9US28","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C1783.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.01","synonyms":[{"name":"Spom972h-SPAC1783.01","type":"exact"}],"termid":"PR:Q9US28"}


id: GO:0036072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance, that does not require the replacement of preexisting tissues.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"direct ossification","termid":"GO:0036072"}


id: MONDO:0012255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"chromosome inversion disorder","termid":"MONDO:0043678"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 pericentric inversion","secondary_identifiers":["MESH:C563734","OMIM:609334","UMLS:C1836305","MEDGEN:322886"],"synonyms":[{"name":"chromosome 18 pericentric inversion","type":"exact"}],"termid":"MONDO:0012255","xrefs":{"Monarch":{"xref_id":"0012255"}}}


id: PBO:0088049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin hydrolase; deubiquitinates intralumenal vesicle (ILVs) cargo proteins; required for recycling ubiquitin from proteasome-bound ubiquitinated intermediates, acts at the late endosome/prevacuolar compartment to recover ubiquitin from ubiquitinated membrane proteins destined for the vacuole; DOA4 has a paralog, UBP5, that arose from the whole genome duplication","termid":"PBO:0088049"}


id: PBO:0057025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-2","termid":"PBO:0057025"}


id: MONDO:0014213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"intellectual disability-feeding difficulties-developmental delay-microcephaly syndrome","secondary_identifiers":["OMIM:615502","MEDGEN:816016","Orphanet:363611","UMLS:C3809686","GARD:17566","DOID:0070051"],"synonyms":[{"name":"MRD21","type":"exact"},{"name":"autosomal dominant intellectual disability 21","type":"exact"},{"name":"autosomal dominant mental retardation 21","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 21","type":"related"},{"name":"intellectual disability, autosomal dominant 21","type":"related"},{"name":"intellectual disability, autosomal dominant type 21","type":"exact"},{"name":"mental retardation, autosomal dominant 21","type":"related"},{"name":"mental retardation, autosomal dominant type 21","type":"exact"}],"termid":"MONDO:0014213","xrefs":{"Monarch":{"xref_id":"0014213"}}}


id: GO:0047009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 3-alpha-hydroxy-5-beta-androstane-17-one = NADH + H+ + 5-beta-androstane-3,17-dione.","definition_xrefs":["EC:1.1.1.152","MetaCyc:1.1.1.152-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-alpha-hydroxy-5-beta-androstane-17-one 3-alpha-dehydrogenase activity","secondary_identifiers":["RHEA:10356"],"synonyms":[{"name":"3alpha-hydroxy-5beta-androstane-17-one 3alpha-dehydrogenase activity","type":"related"},{"name":"3alpha-hydroxy-5beta-steroid dehydrogenase activity","type":"related"},{"name":"3alpha-hydroxy-5beta-steroid:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"etiocholanolone 3-alpha-dehydrogenase activity","type":"related"},{"name":"etiocholanolone 3alpha-dehydrogenase activity","type":"related"}],"termid":"GO:0047009"}


id: MONDO:0056814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prostate carcinoma that does not respond to hormone therapy.","definition_xrefs":["NCIT:C114933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hormone-resistant prostate carcinoma","secondary_identifiers":["UMLS:C3898877","MEDGEN:858471"],"synonyms":[{"name":"hormone-resistant prostate cancer","type":"exact"},{"name":"hormone-resistant prostate carcinoma","type":"exact"}],"termid":"MONDO:0056814","xrefs":{"Monarch":{"xref_id":"0056814"}}}


id: PBO:0085963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the growth defect of mutants lacking protein kinase A activity; involved in cAMP-mediated signaling; localized to the nucleus; similar to the mouse testis-specific protein PBS13","termid":"PBO:0085963"}


id: PBO:0057067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 148b","termid":"PBO:0057067"}


id: SO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located in the intergenic region, between genes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"ANNOVAR:intergenic","type":"related"},{"name":"Jannovar:intergenic_variant","type":"exact"},{"name":"Seattleseq:intergenic","type":"exact"},{"name":"VEP:intergenic_variant","type":"exact"},{"name":"intergenic","type":"exact"},{"name":"intergenic variant","type":"exact"},{"name":"snpEff:INTERGENIC","type":"exact"}],"termid":"SO:0001628"}


id: GO:1904281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["PMID:24726328","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase V","termid":"GO:1904279"},{"relation_name":"positively_regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription by RNA polymerase V","synonyms":[{"name":"activation of transcription from RNA pol V promoter","type":"narrow"},{"name":"activation of transcription from RNA polymerase V promoter","type":"narrow"},{"name":"positive regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"up regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"up regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"up-regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"upregulation of transcription from RNA pol V promoter","type":"exact"},{"name":"upregulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904281"}


id: FYECO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Zn ions","synonyms":[{"name":"zinc ions added","type":"exact"}],"termid":"FYECO:0000172"}


id: MONDO:0010226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 2","secondary_identifiers":["OMIM:300018","UMLS:C1848296","MEDGEN:341190","MESH:C535601","NANDO:1200404","GARD:9159","DOID:0111777"],"synonyms":[{"name":"46,XY SEX reversal 2","type":"related"},{"name":"46,XY Sex reversal type 2","type":"exact"},{"name":"46,XY Sex reversal, Dax1-related","type":"related"},{"name":"46,XY sex reversal 2","type":"exact"},{"name":"46XY sex reversal 2, dosage-sensitive","type":"exact"},{"name":"SRXY2","type":"related"},{"name":"dosage-sensitive Sex reversal","type":"related"}],"termid":"MONDO:0010226","xrefs":{"Monarch":{"xref_id":"0010226"}}}


id: PBO:0044319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1","termid":"PBO:0044319"}


id: FYPO:0002252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains a single septum, has one nucleus, is elongated, and is inviable. The septum is in an abnormal location, and the nucleus is located in one compartment of the septated cell. The cell compartment containing the nucleus is swollen (i.e. has a larger diameter and volume than the other compartment).","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal septum location","termid":"FYPO:0002253"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate monoseptate vegetative cell","termid":"FYPO:0001917"},{"relation_name":"is_a","term_name":"inviable swollen mononucleate monoseptate vegetative cell","termid":"FYPO:0002103"},{"relation_name":"is_a","term_name":"normal septum location","termid":"FYPO:0002253"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000004","FYPO:0000257","FYPO:0000337","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0000005","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"inviable swollen elongated mononucleate vegetative cell with normally localized septum","synonyms":[{"name":"inviable elongated mononucleate vegetative cell with normally localized septum with increased cell volume","type":"exact"},{"name":"inviable enlarged elongated mononucleate vegetative cell with normally localized septum","type":"related"},{"name":"inviable large elongated mononucleate vegetative cell with normally localized septum","type":"related"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally localised septum","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally localized septum during mitotic cell cycle","type":"related"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally positioned septum","type":"exact"},{"name":"lethal; swollen elongated mononucleate vegetative cell with normally localized septum","type":"exact"},{"name":"long swollen mononucleate cell with normally localized septum","type":"exact"},{"name":"swollen elongated mononucleate cell with normal septum position","type":"narrow"},{"name":"swollen elongated mononucleate cell with normally localized septum near new end during vegetative growth","type":"exact"},{"name":"swollen elongated mononucleate cell with normally placed septum","type":"exact"}],"termid":"FYPO:0002252"}


id: MONDO:0011700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 19p13.","definition_xrefs":["DOID:0110907","PMID:10777714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 6","secondary_identifiers":["MEDGEN:376191","OMIM:606674","MESH:C564681","UMLS:C1847692"],"synonyms":[{"name":"IBD6","type":"exact"},{"name":"inflammatory bowel disease 6","type":"exact"},{"name":"inflammatory bowel disease type 6","type":"exact"}],"termid":"MONDO:0011700","xrefs":{"Monarch":{"xref_id":"0011700"}}}


id: FYPO:0007612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased transcription from STREP promoter","synonyms":[{"name":"decreased transcription from STREP promoter during mitotic cell cycle","type":"related"},{"name":"decreased transcription from STREP promoter during vegetative growth","type":"exact"},{"name":"reduced transcription from STREP promoter","type":"exact"}],"termid":"FYPO:0007612"}


id: PBO:0079078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-6","termid":"PBO:0079078"}


id: FYPO:0002910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to transcribed regions of chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin at transcribed regions during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at transcribed regions during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at transcribed regions during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to transcribed chromatin regions during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at transcribed regions during vegetative growth","type":"exact"}],"termid":"FYPO:0002910"}


id: FYPO:0003528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the actomyosin contractile ring is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to actomyosin contractile ring","synonyms":[{"name":"ectopic protein localization to actomyosin contractile ring","type":"exact"},{"name":"protein mislocalised to actomyosin contractile ring","type":"exact"},{"name":"protein mislocalised to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"protein mislocalized to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytokinetic contractile ring","type":"exact"},{"name":"protein mislocalized to mitotic contractile ring","type":"exact"}],"termid":"FYPO:0003528"}


id: MONDO:0010205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Wolman disease with hypolipoproteinemia and acanthocytosis (obsolete MONDO:0010205)","termid":"MONDO:0010205","xrefs":{"Monarch":{"xref_id":"0010205"}}}


id: GO:0016304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A heterodimeric phosphoinositide 3-kinase which can phosphorylate phosphatidylinositol, phosphatidylinositol-4-phosphate or phosphatidylinositol-4,5-bisphosphate. Also possesses intrinsic protein kinase activity.","definition_xrefs":["PMID:9759495"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity, class I (obsolete GO:0016304)","synonyms":[{"name":"phosphatidylinositol 3-kinase activity, class I","type":"exact"}],"termid":"GO:0016304"}


id: PBO:0079255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 27","termid":"PBO:0079255"}


id: PR:Q7Z9I3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC663.08c gene.","definition_xrefs":["UniProtKB:Q7Z9I3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C663.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.08c","synonyms":[{"name":"Spom972h-SPCC663.08c","type":"exact"}],"termid":"PR:Q7Z9I3"}


id: PR:Q9USQ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC577.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USQ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C577.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.11","synonyms":[{"name":"Spom972h-SPBC577.11","type":"exact"}],"termid":"PR:Q9USQ8"}


id: PATO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An anterior-posterior diameter quality which is relatively large.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased diameter","termid":"PATO:0001714"},{"relation_name":"is_a","term_name":"anterior-posterior diameter","termid":"PATO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased anterior-posterior diameter","synonyms":[{"name":"high anterior-posterior diameter","type":"exact"}],"termid":"PATO:0002043"}


id: MONDO:0020646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin lymphoma arising from the conjunctiva, lacrimal gland, lacrimal drainage apparatus, eyelids, or other orbital tissues around the eye. The vast majority of cases are extranodal marginal zone lymphomas of mucosa-associated lymphoid tissue, however, other histologic types of lymphomas can originate from ocular adnexal tissues, including rare cases of NK/T-cell lymphomas of nasal type.","definition_xrefs":["NCIT:C88145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye adnexa disorder","termid":"MONDO:0000462"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"ocular adnexal lymphoma","secondary_identifiers":["UMLS:C2981712","MEDGEN:453939"],"synonyms":[{"name":"OAL","type":"exact"},{"name":"non-Hodgkin lymphoma of ocular adnexa","type":"exact"},{"name":"ocular adnexa non-Hodgkin lymphoma","type":"exact"},{"name":"ocular adnexal lymphoma","type":"exact"}],"termid":"MONDO:0020646","xrefs":{"Monarch":{"xref_id":"0020646"}}}


id: PATO:0001172
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elasticity quality inhering in a bearer by virtue of the bearer's inability to recover its size and shape after deformation in any way.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elasticity","termid":"PATO:0001031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inelastic","termid":"PATO:0001172"}


id: GO:0030093
data:
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id: GO:0005246
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id: PBO:0027915
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0027915"}


id: GO:0061908
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id: FYECO:0000426
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id: MONDO:0006247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rare tumors that affect the hematopoietic and lymphoid tissues. The cells of origin are the histiocytes and accessory cells. They can occur at any age and show no significant variations in geographical distribution. This category includes the histiocytic sarcoma, Langerhans cell histiocytosis, Langerhans cell sarcoma, interdigitading dendritic cell sarcoma/tumor, follicular dendritic cell sarcoma/tumor, and dendritic cell sarcoma, not otherwise specified. (WHO, 2001)","definition_xrefs":["NCIT:C9294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid hemopathy","termid":"MONDO:0015757"},{"relation_name":"is_a","term_name":"hematopoietic and lymphoid cell neoplasm","termid":"MONDO:0044881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"histiocytic and dendritic cell neoplasm","secondary_identifiers":["DOID:5621","EFO:1000297","MEDGEN:232291","GARD:19441","Orphanet:98287","UMLS:C1334030"],"synonyms":[{"name":"histiocytic and Dendritic cell neoplasms","type":"exact"},{"name":"histiocytic and Dendritic cell tumors","type":"exact"},{"name":"histiocytic and Dendritic cell tumours","type":"exact"},{"name":"histiocytic and dendritic cell","type":"related"},{"name":"histiocytic and dendritic cell cancer","type":"related"},{"name":"histiocytic and dendritic cell neoplasm","type":"exact"},{"name":"histiocytic and dendritic cell tumor","type":"related"},{"name":"histiocytic and dendritic cell tumour","type":"related"}],"termid":"MONDO:0006247","xrefs":{"Monarch":{"xref_id":"0006247"}}}


id: PBO:0084775
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein of unknown function; major constituent of the outer membrane, extending into the intermembrane space; interacts with porin (Por1p) and with Om14p; imported via the presequence pathway involving the TOM and TIM23 complexes, then assembled in the outer membrane by Mim1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0084775"}


id: GO:0007346
data:
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id: GO:0001522
data:
  {"annotated_genes":["SJAG_01172","SJAG_02978","SJAG_03213","SJAG_00566","SJAG_03755","SJAG_04754","SJAG_00319","SJAG_03125","SJAG_04065","SJAG_01234","SJAG_03572","SJAG_00083","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68367,104964,108064],"is_not":false,"summary":null,"term":"GO:0001522"},{"annotations":[90717,91786,105697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000455"},{"annotations":[94164,113735,94855,101982,111930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990481"},{"annotations":[89522,100655,94856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031118"},{"annotations":[105758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000454"},{"annotations":[89523,94857,100656,105759,105698,113736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"},{"annotations":[90718,105699,101983,94165,111931,113737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031119"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine within an RNA molecule.","definition_xrefs":["GOC:mah","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00088":null,"SJAG_00319":null,"SJAG_00566":null,"SJAG_01172":null,"SJAG_01234":null,"SJAG_02978":null,"SJAG_03125":null,"SJAG_03213":null,"SJAG_03572":null,"SJAG_03755":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Wikipedia:Pseudouridine","Wikipedia:Pseudouridylation"],"synonyms":[{"name":"pseudouridylation","type":"exact"}],"termid":"GO:0001522","terms_by_termid":{"GO:0000454":null,"GO:0000455":null,"GO:0001522":null,"GO:0031118":null,"GO:0031119":null,"GO:0031120":null,"GO:1990481":null}}


id: GO:0048282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of determinate inflorescences are generated and organized. A determinate inflorescence is one that can only produce a predetermined number of floral meristems.","definition_xrefs":["PMID:9553044","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflorescence morphogenesis","termid":"GO:0048281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determinate inflorescence morphogenesis","termid":"GO:0048282"}


id: PBO:0042529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5","termid":"PBO:0042529"}


id: MONDO:0015393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nasal ganglioglioma is a rare tumor, presenting in newborns, containing both neuronal and astrocytic components and that can be endonasal, extranasal or both. It is usually identified as a nasal mass that may cause feeding difficulties and nasal obstruction.","definition_xrefs":["Orphanet:141115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"ganglioglioma","termid":"MONDO:0016733"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal ganglioglioma","secondary_identifiers":["UMLS:C5548206","icd11.foundation:40917416","MEDGEN:1786513","GARD:19950"],"termid":"MONDO:0015393","xrefs":{"Monarch":{"xref_id":"0015393"}}}


id: MONDO:0011139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diabetic embryopathy","termid":"MONDO:0016018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preaxial hallucal polydactyly","secondary_identifiers":["OMIM:601759","MEDGEN:356507","MESH:C566632","UMLS:C1866339"],"synonyms":[{"name":"preaxial hallucal polydactyly","type":"exact"}],"termid":"MONDO:0011139","xrefs":{"Monarch":{"xref_id":"0011139"}}}


id: MONDO:0018697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 1","termid":"MONDO:0016883"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1p35.2 microdeletion syndrome","secondary_identifiers":["GARD:21898","MEDGEN:1807819","Orphanet:456298","UMLS:C5679992"],"synonyms":[{"name":"Del(1)(p35.2)","type":"exact"},{"name":"deletion 1p35.2","type":"exact"},{"name":"monosomy 1p35.2","type":"exact"}],"termid":"MONDO:0018697","xrefs":{"Monarch":{"xref_id":"0018697"}}}


id: MONDO:0012259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Colloid cysts of the third ventricle are non-cancerous brain lesions. The third ventricle is a cavity in the brain that is filled with cerebral spinal fluid (CSF). Colloid cysts can cause blockages resulting in a build up of CSF in the brain (hydrocephalus) and increased pressure. Some colloid cysts are asymptomatic while others cause neurological symptoms, such as headaches, swelling of the optic nerve (papilledema), and drop attacks. When symptoms are present onset tends to be in the third to sixth decade of life. While uncommon, symptoms of colloid cyst can become life threatening.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colloid cysts of third ventricle","secondary_identifiers":["OMIM:609363","UMLS:C0266481","MEDGEN:82744","MESH:C535966"],"synonyms":[{"name":"colloid cysts of third ventricle","type":"exact"},{"name":"neuroepithelial cysts of third ventricle","type":"related"}],"termid":"MONDO:0012259","xrefs":{"Monarch":{"xref_id":"0012259"}}}


id: PBO:0028989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_small_RNA_level_(obsolete_FYPO:0003261)","termid":"PBO:0028989"}


id: PBO:0027205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_heat_shock","termid":"PBO:0027205"}


id: PBO:0050169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 25","termid":"PBO:0050169"}


id: PBO:0069521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 790, pseudogene","termid":"PBO:0069521"}


id: PBO:0028986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-overlapping_meiosis_I_spindles","termid":"PBO:0028986"}


id: GO:0008714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + H2O = D-ribose 5-phosphate + adenine.","definition_xrefs":["RHEA:20129","EC:3.2.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"AMP nucleosidase activity","secondary_identifiers":["KEGG_REACTION:R00182","MetaCyc:AMP-NUCLEOSID-RXN"],"synonyms":[{"name":"AMP phosphoribohydrolase activity","type":"related"},{"name":"adenosine monophosphate nucleosidase activity","type":"related"},{"name":"adenylate nucleosidase activity","type":"related"}],"termid":"GO:0008714"}


id: FYPO:0005857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of antisense RNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total antisense RNA or a specific antisense RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered antisense RNA level during vegetative growth","synonyms":[{"name":"abnormal antisense RNA level during vegetative growth","type":"exact"},{"name":"altered antisense RNA level during mitotic cell cycle","type":"related"},{"name":"altered antisense RNA transcript level during vegetative growth","type":"exact"},{"name":"altered cellular antisense RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0005857"}


id: PBO:0089847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, protein phosphatase regulatory subunit","termid":"PBO:0089847"}


id: MONDO:0008290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"porokeratosis of Mibelli","termid":"MONDO:0019141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis 1, Mibelli type","secondary_identifiers":["GARD:15108","OMIM:175800"],"synonyms":[{"name":"POROK1","type":"exact"},{"name":"porokeratosis 1, MIBELLI type","type":"related"},{"name":"porokeratosis 1, multiple types","type":"related"},{"name":"porokeratosis of Mibelli","type":"related"}],"termid":"MONDO:0008290","xrefs":{"Monarch":{"xref_id":"0008290"}}}


id: MONDO:0012463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the SEMA4A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 35","secondary_identifiers":["MEDGEN:339931","DOID:0110357","GARD:10402","UMLS:C1853214","ICD10CM:H35.5","MESH:C565206","OMIM:610282"],"synonyms":[{"name":"RP 35","type":"related"},{"name":"RP35","type":"exact"},{"name":"SEMA4A retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 35","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in SEMA4A","type":"exact"},{"name":"retinitis pigmentosa type 35","type":"exact"}],"termid":"MONDO:0012463","xrefs":{"Monarch":{"xref_id":"0012463"}}}


id: MONDO:0003733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma composed exclusively of fully differentiated, 'adult-type' tissue elements that are sometimes arranged in a pattern resembling normal tissue relationships. Mitotic activity is low or absent. The more common ectodermal components present in a mature teratoma include skin, brain and choroid plexus. The more common mesodermal components include cartilage, bone, fat and muscle (both smooth and striated). And the most common endodermal components are cysts lined by epithelia of respiratory or enteric type and in some cases pancreatic or hepatic tissue. (Adapted from WHO)","definition_xrefs":["NCIT:C7013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system teratoma","termid":"MONDO:0002718"},{"relation_name":"is_a","term_name":"mature teratoma","termid":"MONDO:0003517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system mature teratoma","secondary_identifiers":["MEDGEN:234103","ONCOTREE:BMT","UMLS:C1332886","DOID:6017"],"synonyms":[{"name":"CNS mature teratoma","type":"exact"},{"name":"central nervous system mature teratoma","type":"exact"},{"name":"mature teratoma","type":"related"},{"name":"mature teratoma of CNS","type":"exact"},{"name":"mature teratoma of central nervous system","type":"exact"},{"name":"mature teratoma of the CNS","type":"exact"},{"name":"mature teratoma of the central nervous system","type":"exact"}],"termid":"MONDO:0003733","xrefs":{"Monarch":{"xref_id":"0003733"}}}


id: FYPO:0005938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at late replication origins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:24656819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at replication origin","termid":"FYPO:0004962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to chromatin at late replication origin","synonyms":[{"name":"normal protein localisation to chromatin at late replication origin","type":"exact"},{"name":"normal protein localization to chromatin at late origin","type":"exact"},{"name":"normal protein localization to chromatin at late replication origin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at late replication origin during vegetative growth","type":"exact"}],"termid":"FYPO:0005938"}


id: GO:0140032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon glycosylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"glycosylation-dependent protein binding","termid":"GO:0140032"}


id: PBO:0050568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H4","termid":"PBO:0050568"}


id: PBO:0045571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 21","termid":"PBO:0045571"}


id: MONDO:1010528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, horse","secondary_identifiers":["OMIA:000197-9796"],"termid":"MONDO:1010528","xrefs":{"Monarch":{"xref_id":"1010528"}}}


id: PBO:0085071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonhistone component of centromeric chromatin; binds to histone H3 variant, Cse4p, and recruits it to centromeres; involved in the assembly and maintenance of Cse4-H4 at centromeres; required for kinetochore assembly and G2/M progression; may protect Cse4p from ubiquitination; homolog of mammalian HJURP","termid":"PBO:0085071"}


id: GO:0046001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of preblastoderm mitotic cell cycle","termid":"GO:0007347"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle, embryonic","termid":"GO:0045976"},{"relation_name":"negatively_regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"down regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"negative regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0046001"}


id: PBO:0051340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-18 (pseudogene)","termid":"PBO:0051340"}


id: PBO:0045920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 14","termid":"PBO:0045920"}


id: GO:0009116
data:
  {"annotated_genes":["SJAG_00957","SJAG_01673","SJAG_02582","SJAG_01359","SJAG_00044","SJAG_00885","SJAG_03881","SJAG_06634","SJAG_01859","SJAG_04927","SJAG_01781","SJAG_00694","SJAG_02179","SJAG_02580","SJAG_04264","SJAG_02959","SJAG_04693","SJAG_03213","SJAG_05029","SJAG_03771","SJAG_01070","SJAG_00134","SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[87102,87103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[90059,113144,113145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[116282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[88707,107838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[107962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[107963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[112534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[107964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[98091,98092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[90167,90585,111620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[106729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042278"},{"annotations":[89288,115283,93258,93040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[90168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[104965,106731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006213"},{"annotations":[113257,97236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[111363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01070":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03213":null,"SJAG_03771":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_04693":null,"SJAG_04927":null,"SJAG_05029":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside metabolism","type":"exact"}],"termid":"GO:0009116","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0006213":null,"GO:0009972":null,"GO:0042278":null,"GO:0043097":null,"GO:0043174":null,"GO:0046085":null,"GO:0046086":null,"GO:0046132":null,"GO:0046135":null,"GO:0046495":null,"GO:0071590":null,"GO:0071592":null}}


id: PBO:0076005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIM2 antisense RNA 1","termid":"PBO:0076005"}


id: SO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a transcription factor binding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_translocation","termid":"SO:0001884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_translocation","synonyms":[{"name":"TFBS binding site translocation","type":"exact"},{"name":"transcription factor binding site translocation","type":"exact"}],"termid":"SO:0001885"}


id: PBO:0087306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and WD-repeat protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; also required for meiotic double-strand break recombination; null mutants have superkiller phenotype","termid":"PBO:0087306"}


id: PBO:0027956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pyridoxine:NADP_4-dehydrogenase_activity","termid":"PBO:0027956"}


id: MONDO:0800370
data:
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id: CHEBI:16761
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP","termid":"CHEBI:16761"}


id: GO:0097005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adipokinetic hormone receptor. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.","definition_xrefs":["GOC:sart","PMID:11904407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone receptor binding","termid":"GO:0051428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"adipokinetic hormone receptor binding","synonyms":[{"name":"AKH receptor binding","type":"exact"}],"termid":"GO:0097005"}


id: GO:0050115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myosin light-chain phosphate + H2O = myosin light chain + phosphate.","definition_xrefs":["EC:3.1.3.53","MetaCyc:MYOSIN-LIGHT-CHAIN-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0004721","GO:0016787","GO:0140096","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"myosin-light-chain-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-419232"],"synonyms":[{"name":"[Myosin light-chain]-phosphatase activity","type":"exact"},{"name":"myosin light chain kinase phosphatase activity","type":"related"},{"name":"myosin light-chain kinase phosphatase activity","type":"related"},{"name":"myosin-light-chain phosphatase activity","type":"related"},{"name":"myosin-light-chain-phosphate phosphohydrolase activity","type":"related"},{"name":"protein phosphatase 2A","type":"related"}],"termid":"GO:0050115"}


id: GO:0099588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the concentration of calcium ions in the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytosolic calcium ion concentration","termid":"GO:0007204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of postsynaptic cytosolic calcium concentration","termid":"GO:0099588"}


id: PBO:0041901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBARP divergent transcript","termid":"PBO:0041901"}


id: PR:Q9UU79
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein NSA2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12642:SF0","OMA:SCHPO05060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein nsa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.08","secondary_identifiers":["UniProtKB:Q9UU79"],"synonyms":[{"name":"Spom972h-NSA2","type":"exact"}],"termid":"PR:Q9UU79"}


id: GO:1901202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix assembly.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix assembly","termid":"GO:1901201"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix organization","termid":"GO:1903054"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of extracellular matrix assembly","synonyms":[{"name":"down regulation of extracellular matrix assembly","type":"exact"},{"name":"down-regulation of extracellular matrix assembly","type":"exact"},{"name":"downregulation of extracellular matrix assembly","type":"exact"},{"name":"inhibition of extracellular matrix assembly","type":"narrow"}],"termid":"GO:1901202"}


id: MONDO:1010980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydranencephaly that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydranencephaly, non-human animal","termid":"MONDO:1010232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydranencephaly, cattle","secondary_identifiers":["OMIA:000486-9913"],"termid":"MONDO:1010980","xrefs":{"Monarch":{"xref_id":"1010980"}}}


id: PBO:0051181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-72","termid":"PBO:0051181"}


id: PBO:0070292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 33","termid":"PBO:0070292"}


id: GO:0090495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a low-density lipoprotein particle into its constituent components.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle disassembly","termid":"GO:0071829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle disassembly","termid":"GO:0090495"}


id: GO:0007216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by glutamate binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:9131252","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled glutamate receptor signaling pathway","synonyms":[{"name":"G-protein coupled glutamate receptor signaling pathway","type":"exact"},{"name":"metabotropic glutamate receptor signaling pathway","type":"exact"},{"name":"metabotropic glutamate receptor signalling pathway","type":"exact"}],"termid":"GO:0007216"}


id: PBO:0040341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit e","termid":"PBO:0040341"}


id: PR:Q09757
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps901 gene.","definition_xrefs":["UniProtKB:Q09757","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.07","synonyms":[{"name":"Spom972h-rps901","type":"exact"}],"termid":"PR:Q09757"}


id: GO:0038033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a vascular endothelial growth factor (VEGF) to its receptor on the surface of a cell, which activates or increases the frequency, rate or extent of endothelial cell chemotaxis.","definition_xrefs":["GOC:rl","GOC:bf","GOC:BHF","PMID:21245381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration by vascular endothelial growth factor signaling pathway","termid":"GO:0038089"},{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"},{"relation_name":"is_a","term_name":"positive regulation of endothelial cell chemotaxis","termid":"GO:2001028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-VEGFR-induced endothelial cell chemotaxis","type":"exact"},{"name":"VEGF-mediated chemotactic endothelial cell migration","type":"broad"},{"name":"positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signalling pathway","type":"exact"},{"name":"positive regulation of endothelial cell chemotaxis by VEGF/VEGFR signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor receptor signaling pathway involved in endothelial cell chemotaxis","type":"related"}],"termid":"GO:0038033"}


id: PBO:0031082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_metabolism_phenotype","termid":"PBO:0031082"}


id: MONDO:0100490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital breast hypoplasia/aplasia","termid":"MONDO:0015855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breasts and/or nipples, aplasia or hypoplasia of, 1","secondary_identifiers":["GARD:15045","OMIM:113700"],"synonyms":[{"name":"BNAH1","type":"exact"},{"name":"amastia","type":"related"},{"name":"amazia","type":"related"},{"name":"athelia","type":"related"},{"name":"breasts and/or nipples, aplasia or hypoplasia of, 1","type":"exact"}],"termid":"MONDO:0100490","xrefs":{"Monarch":{"xref_id":"0100490"}}}


id: PR:P0CT38
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-5 gene.","definition_xrefs":["UniProtKB:P0CT38","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-5 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB15E9.03c","synonyms":[{"name":"Spom972h-Tf2-5","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT38"}


id: GO:0019873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tellurium sensitivity/resistance (obsolete GO:0019873)","synonyms":[{"name":"tellurium sensitivity/resistance","type":"exact"}],"termid":"GO:0019873"}


id: GO:0140048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of manganese ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:25319704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transport","termid":"GO:0071421"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"manganese ion export across plasma membrane","synonyms":[{"name":"manganese ion export from cell","type":"exact"}],"termid":"GO:0140048"}


id: PBO:0056782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mex-3 RNA binding family member D","termid":"PBO:0056782"}


id: PBO:0017536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Tls1","termid":"PBO:0017536"}


id: PBO:0028640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_spore_population","termid":"PBO:0028640"}


id: PBO:0003139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron/zinc ion transporter (predicted)","termid":"PBO:0003139"}


id: GO:0098526
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuromuscular junction that functions in the inhibition of somatic muscle myotube contraction. Examples of somatic muscle myotubes include the somatic muscle cells of arthropods.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory neuromuscular junction","termid":"GO:0098521"},{"relation_name":"is_a","term_name":"neuromuscular junction of somatic muscle myotube","termid":"GO:0098524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory neuromuscular junction of somatic myotube","termid":"GO:0098526"}


id: PBO:0063052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylglycine alpha-amidating monooxygenase","termid":"PBO:0063052"}


id: PBO:0086874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative subunit of the 90S preribosome processome complex; overexpression rescues supressor mutant of mcm10; null mutant is viable; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0086874"}


id: PBO:0040963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 34","termid":"PBO:0040963"}


id: GO:0090708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the polarity of a plant organ axis is specified.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of plant organ axis polarity","termid":"GO:0090708"}


id: GO:0060826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the formation of the neural plate anterior/posterior pattern.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in neural plate anterior/posterior pattern formation (obsolete GO:0060826)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060826"}


id: PBO:0078848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 4","termid":"PBO:0078848"}


id: GO:0006516
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95212,93049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"},{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"glycoprotein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycoprotein breakdown","type":"exact"},{"name":"glycoprotein catabolism","type":"exact"},{"name":"glycoprotein degradation","type":"exact"}],"termid":"GO:0006516","terms_by_termid":{"GO:0097466":null}}


id: GO:1901880
data:
  {"annotated_genes":["SJAG_01894","SJAG_02700","SJAG_01993","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91834,87772,98399,113761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein depolymerization.","definition_xrefs":["PMID:12032137","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"negatively_regulates","term_name":"protein depolymerization","termid":"GO:0051261"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein depolymerization","type":"exact"},{"name":"down regulation of protein polymer breakdown","type":"exact"},{"name":"down regulation of protein polymer catabolic process","type":"exact"},{"name":"down regulation of protein polymer catabolism","type":"exact"},{"name":"down regulation of protein polymer degradation","type":"exact"},{"name":"down-regulation of protein depolymerization","type":"exact"},{"name":"down-regulation of protein polymer breakdown","type":"exact"},{"name":"down-regulation of protein polymer catabolic process","type":"exact"},{"name":"down-regulation of protein polymer catabolism","type":"exact"},{"name":"down-regulation of protein polymer degradation","type":"exact"},{"name":"downregulation of protein depolymerization","type":"exact"},{"name":"downregulation of protein polymer breakdown","type":"exact"},{"name":"downregulation of protein polymer catabolic process","type":"exact"},{"name":"downregulation of protein polymer catabolism","type":"exact"},{"name":"downregulation of protein polymer degradation","type":"exact"},{"name":"inhibition of protein depolymerization","type":"narrow"},{"name":"inhibition of protein polymer breakdown","type":"exact"},{"name":"inhibition of protein polymer catabolic process","type":"exact"},{"name":"inhibition of protein polymer catabolism","type":"exact"},{"name":"inhibition of protein polymer degradation","type":"exact"},{"name":"negative regulation of protein polymer breakdown","type":"exact"},{"name":"negative regulation of protein polymer catabolic process","type":"exact"},{"name":"negative regulation of protein polymer catabolism","type":"exact"},{"name":"negative regulation of protein polymer degradation","type":"exact"}],"termid":"GO:1901880","terms_by_termid":{"GO:0051016":null}}


id: GO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a sequence of DNA that is a termination site for bacterial-type RNA polymerase in order to promote transcription termination by bacterial-type RNA polymerase.","definition_xrefs":["PMID:18280161","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, bacterial-type RNA polymerase termination site sequence-specific binding (obsolete GO:0001149)","synonyms":[{"name":"bacterial-type RNA polymerase termination site sequence-specific DNA binding transcription factor activity","type":"exact"}],"termid":"GO:0001149"}


id: MONDO:0011032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYO7A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 11","secondary_identifiers":["DOID:0110543","MEDGEN:331297","MESH:C563353","UMLS:C1832475","GARD:18104","OMIM:601317"],"synonyms":[{"name":"DFNA11","type":"narrow"},{"name":"MYO7A autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 11","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 11","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYO7A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 11","type":"narrow"},{"name":"deafness, autosomal dominant 11","type":"narrow"},{"name":"deafness, autosomal dominant type 11","type":"narrow"}],"termid":"MONDO:0011032","xrefs":{"Monarch":{"xref_id":"0011032"}}}


id: GO:0002643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"regulates","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction","termid":"GO:0002643"}


id: PATO:0001725
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male receptivity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male receptivity","termid":"PATO:0001721"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased male receptivity","synonyms":[{"name":"high male receptivity","type":"exact"}],"termid":"PATO:0001725"}


id: MONDO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A genetic disease that is the result of one or more abnormal alleles and may be dominant (a single copy of the abnormal allele is sufficient to give rise to the disease), semi-dominant, or recessive (requiring both copies of the gene to have an abnormal allele).","definition_xrefs":["DO:wk,ls","DOID:0050177"],"gene_count":0,"genotype_count":0,"name":"obsolete monogenic disease (obsolete MONDO:0000275)","termid":"MONDO:0000275","xrefs":{"Monarch":{"xref_id":"0000275"}}}


id: GO:0035124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the caudal fin are generated and organized. The caudal fin is an unpaired medial fin mounted at the caudal end of the fish and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic medial fin morphogenesis","termid":"GO:0035122"},{"relation_name":"is_a","term_name":"caudal fin morphogenesis","termid":"GO:0035143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic caudal fin morphogenesis","termid":"GO:0035124"}


id: FYPO:0003309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of IMP cyclohydrolase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal IMP cyclohydrolase activity","termid":"FYPO:0003309"}


id: PBO:0075271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 24","termid":"PBO:0075271"}


id: FYPO:0007846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle is shorter than normal during anaphase of meiosis I.","definition_xrefs":["PMID:34346498","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short meiotic spindle","termid":"FYPO:0000735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002399","FYPO:0000054","FYPO:0000002","FYPO:0000120","FYPO:0005447"],"is_obsolete":false,"name":"short meiotic spindle during anaphase I","synonyms":[{"name":"short meiosis I spindle during anaphase","type":"exact"},{"name":"short spindle during anaphase of meiosis I","type":"exact"},{"name":"short spindle during meiotic anaphase I","type":"exact"}],"termid":"FYPO:0007846"}


id: MONDO:0019317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bazex-Dupre-Christol syndrome","termid":"MONDO:0010535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"follicular atrophoderma-basal cell carcinoma","secondary_identifiers":["Orphanet:79459"],"termid":"MONDO:0019317","xrefs":{"Monarch":{"xref_id":"0019317"}}}


id: MONDO:0016729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of central nervous system neoplasms with a variable amount of neuronal and, less consistently, glial differentiation. They occur at a low frequency and usually carry a favorable prognosis. Representative examples include dysplastic cerebellar gangliocytoma, desmoplastic infantile ganglioglioma, desmoplastic infantile astrocytoma, and dysembryoplastic neuroepithelial tumor. (Adapted from WHO)","definition_xrefs":["NCIT:C4747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroepithelial neoplasm","termid":"MONDO:0021193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed neuronal-glial tumor","secondary_identifiers":["UMLS:C0474844","icd11.foundation:1792897751","GARD:20728","MEDGEN:105377","Orphanet:251934"],"synonyms":[{"name":"neuronal and Glio-neuronal neoplasm","type":"exact"},{"name":"neuronal and Glio-neuronal tumor","type":"exact"},{"name":"neuronal and Glio-neuronal tumour","type":"exact"},{"name":"neuronal and mixed neuronal-glial tumor","type":"exact"},{"name":"neuronal and mixed neuronal-glial tumors","type":"exact"},{"name":"neuronal and mixed neuronal-glial tumour","type":"exact"},{"name":"neuronal and mixed neuronal-glial tumours","type":"exact"}],"termid":"MONDO:0016729","xrefs":{"Monarch":{"xref_id":"0016729"}}}


id: PBO:0048303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 2","termid":"PBO:0048303"}


id: PBO:0078207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-9","termid":"PBO:0078207"}


id: GO:0120312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the duplicated basal bodies migrate in pairs to the mitotic poles of the nucleus and results in equal distribution in the daughter cells. Ciliary basal body segregation ensures inheritance of the duplicated mitochondrial DNA to the two daughter cells in the Trypanosoma parasites.","definition_xrefs":["GOC:ach","PMID:26862392","PMID:1876188","PMID:27252853","PMID:26272611","GOC:krc","PMID:4055898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ciliary basal body segregation","synonyms":[{"name":"ciliary basal body separation","type":"narrow"},{"name":"microtubule basal body segregation","type":"exact"},{"name":"microtubule basal body separation","type":"narrow"}],"termid":"GO:0120312"}


id: MONDO:0007204
data:
  {"annotated_genes":["SJAG_00288"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86232],"is_not":false,"summary":null,"term":"MONDO:0007204"}]},"cv_name":"mondo","definition":"Any Cole-Carpenter syndrome in which the cause of the disease is a mutation in the P4HB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cole-Carpenter syndrome","termid":"MONDO:0016085"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Cole-Carpenter syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1374755","OMIM:112240","UMLS:C4317154"],"synonyms":[{"name":"CLCRP1","type":"related"},{"name":"COLE-CARPENTER syndrome 1","type":"related"},{"name":"Cole-Carpenter syndrome 1","type":"exact"},{"name":"Cole-Carpenter syndrome caused by mutation in P4HB","type":"exact"},{"name":"Cole-Carpenter syndrome type 1","type":"exact"},{"name":"P4HB Cole-Carpenter syndrome","type":"exact"},{"name":"bone fragility with craniosynostosis, ocular proptosis, hydrocephalus, and distinctive Facial features","type":"related"}],"termid":"MONDO:0007204","terms_by_termid":{"MONDO:0007204":null},"xrefs":{"Monarch":{"xref_id":"0007204"}}}


id: PBO:0078154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 32 (pseudogene)","termid":"PBO:0078154"}


id: PBO:0042632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 7 pseudogene","termid":"PBO:0042632"}


id: PBO:0069957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1250, pseudogene","termid":"PBO:0069957"}


id: MOD:00258
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-threonine residue by a thioether bond to form S-(2-aminovinyl)-3-methyl-D-cysteine.","definition_xrefs":["RESID:AA0253","PubMed:9119018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(2-aminovinyl)-3-methyl-D-cysteine","synonyms":[{"name":"(2S,3S)-2-amino-3-[((Z)-2-aminoethenyl)sulfanyl]butanoic acid","type":"exact"},{"name":"2-amino-3-[(2-aminovinyl)sulfanyl]butanoic acid","type":"exact"},{"name":"CROSSLNK S-(2-aminovinyl)-3-methyl-D-cysteine (Thr-Cys)","type":"exact"},{"name":"S-(2-aminovinyl)-3-methyl-D-cysteine","type":"exact"},{"name":"decarboxylated methyllanthionine","type":"exact"}],"termid":"MOD:00258"}


id: GO:0006668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphinganine-1-phosphate metabolic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate metabolic process","type":"exact"},{"name":"dihydrosphingosine-1-phosphate metabolism","type":"exact"},{"name":"sphinganine-1-phosphate metabolism","type":"exact"}],"termid":"GO:0006668"}


id: MONDO:0020185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyebrow/eyelashes hypertrichosis (obsolete MONDO:0020185)","secondary_identifiers":["Orphanet:98595"],"termid":"MONDO:0020185","xrefs":{"Monarch":{"xref_id":"0020185"}}}


id: PBO:0050622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 14","termid":"PBO:0050622"}


id: GO:0060870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of the cell wall that contributes to the process of floral organ abscission.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall modification involved in abscission","termid":"GO:0009830"},{"relation_name":"part_of","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall disassembly involved in floral organ abscission","termid":"GO:0060870"}


id: GO:0072400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about DNA integrity is received and converted into a molecular signal, contributing to a mitotic DNA integrity checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic DNA integrity checkpoint (obsolete GO:0072400)","synonyms":[{"name":"DNA integrity checkpoint sensor mechanism","type":"related"},{"name":"DNA integrity checkpoint sensor process","type":"related"},{"name":"detection of stimulus involved in mitotic G2/M transition decatenation checkpoint","type":"related"},{"name":"mitotic G2/M transition decatenation checkpoint sensor mechanism","type":"related"},{"name":"mitotic G2/M transition decatenation checkpoint sensor process","type":"related"},{"name":"sensing involved in DNA integrity checkpoint","type":"related"},{"name":"sensing involved in mitotic G2/M transition decatenation checkpoint","type":"related"}],"termid":"GO:0072400"}


id: GO:0015514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrite transmembrane transporter activity","termid":"GO:0015113"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"nitrite efflux transmembrane transporter activity","synonyms":[{"name":"nitrite extrusion permease activity","type":"exact"}],"termid":"GO:0015514"}


id: PBO:0044517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled associated activator of morphogenesis 1","termid":"PBO:0044517"}


id: MONDO:0970961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-saccular limited dorsal myeloschisis, in which the stalk histology is characterized by skin tissue with dermo-epidermal epithelium in continuity with a subcutaneous fibrocollagenous tract containing various ectopic tissues.","definition_xrefs":["Orphanet:645310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-saccular limited dorsal myeloschisis","termid":"MONDO:0968989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"fibroneural non-saccular limited dorsal myeloschisis","secondary_identifiers":["MEDGEN:1853149","UMLS:C5816724"],"termid":"MONDO:0970961","xrefs":{"Monarch":{"xref_id":"0970961"}}}


id: PBO:0058063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4283-1","termid":"PBO:0058063"}


id: PBO:0058430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4800","termid":"PBO:0058430"}


id: PBO:0042497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 17","termid":"PBO:0042497"}


id: PBO:0063998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 32","termid":"PBO:0063998"}


id: PBO:0067888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 190","termid":"PBO:0067888"}


id: GO:1990393
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, at least composed of CUL7, CCDC8 and OBSL1, that is required for maintaining microtubule and genome integrity.","definition_xrefs":["PMID:24793696","PMID:24793695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"3M complex","termid":"GO:1990393"}


id: MONDO:0011805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited susceptibility to asthma in which the cause of the disease is a mutation in the PTGDR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 1","secondary_identifiers":["OMIM:607277","MEDGEN:339547","UMLS:C1846534"],"synonyms":[{"name":"AS1","type":"related"},{"name":"ASRT1","type":"related"},{"name":"PTGDR inherited susceptibility to asthma","type":"exact"},{"name":"asthma, susceptibility to, 1","type":"exact"},{"name":"asthma-related traits, susceptibility to, 1","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 1","type":"exact"},{"name":"inherited susceptibility to asthma caused by mutation in PTGDR","type":"exact"}],"termid":"MONDO:0011805","xrefs":{"Monarch":{"xref_id":"0011805"}}}


id: PBO:0086367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative alternate subunit of succinate dehydrogenase (SDH); mitochondrial inner membrane protein; genetic interaction with SDH4 suggests that Shh4p can function as a functional SDH subunit; a fraction copurifies with SDH subunit Sdh3p; expression induced by nitrogen limitation in a GLN3, GAT1-dependent manner; Shh4p has greater similarity to human SDHD (subunit D of SDH, implicated in paraganglioma) than does its paralog Sdh4p","termid":"PBO:0086367"}


id: PBO:0029538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_tapered_cells_(obsolete_FYPO:0002184)","termid":"PBO:0029538"}


id: PBO:0000889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L18 (predicted)","termid":"PBO:0000889"}


id: PBO:0006715
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition","termid":"PBO:0006715"}


id: PBO:0027949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0027949"}


id: MONDO:0008687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Woronets trait","secondary_identifiers":["UMLS:C1860237","OMIM:194320","MEDGEN:348570"],"synonyms":[{"name":"Woronets trait","type":"exact"}],"termid":"MONDO:0008687","xrefs":{"Monarch":{"xref_id":"0008687"}}}


id: PR:O74561
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC970.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized inositol polyphosphate kinase C970.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.08","synonyms":[{"name":"Spom972h-SPCC970.08","type":"exact"}],"termid":"PR:O74561"}


id: PBO:0058186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4479","termid":"PBO:0058186"}


id: PBO:0054276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1666","termid":"PBO:0054276"}


id: PBO:0071723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 21","termid":"PBO:0071723"}


id: PBO:0065998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ralA binding protein 1","termid":"PBO:0065998"}


id: PR:P87309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei4-dependent protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.08","synonyms":[{"name":"Spom972h-mde2","type":"exact"}],"termid":"PR:P87309"}


id: GO:0034019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: violaxanthin = capsorubin, and antheraxanthin = capsanthin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete capsanthin/capsorubin synthase activity (obsolete GO:0034019)","synonyms":[{"name":"capsanthin/capsorubin synthase activity","type":"exact"}],"termid":"GO:0034019"}


id: PBO:0082467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium permeable gated cation channel; functions as an osmosensitive, calcium-permeable cation channel when expressed in a heterologous system; may be involved in detoxification; similar to Arabidopsis CSC1","termid":"PBO:0082467"}


id: PBO:0065402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 5","termid":"PBO:0065402"}


id: GO:0016192
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id: PBO:0045736
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen receptor binding site associated antigen 9","termid":"PBO:0045736"}


id: PBO:0002660
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate light chain Dil1","termid":"PBO:0002660"}


id: GO:0010833
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id: PBO:0081856
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id: GO:0052084
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id: PBO:0048055
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 4","termid":"PBO:0048055"}


id: PBO:0061647
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 5","termid":"PBO:0061647"}


id: PBO:0048003
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD4A antisense RNA 1","termid":"PBO:0048003"}


id: GO:0061542
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id: GO:0018888
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-chloroacrylic acid, ClHC=CHCOOH, a chlorinated derivative of acrylic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-chloroacrylic acid metabolic process","secondary_identifiers":["UM-BBD_pathwayID:caa"],"synonyms":[{"name":"3-chloroacrylic acid metabolism","type":"exact"}],"termid":"GO:0018888"}


id: GO:0002483
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC protein complex. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous antigen","termid":"GO:0019883"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen","synonyms":[{"name":"endogenous peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0002483"}


id: GO:0097199
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id: PBO:0063911
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase catalytic subunit type 3","termid":"PBO:0063911"}


id: GO:0010228
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id: GO:0160108
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id: PBO:0057180
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 331","termid":"PBO:0057180"}


id: FYPO:0005080
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id: PBO:0076423
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 10","termid":"PBO:0076423"}


id: GO:2000356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of kidney smooth muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kidney smooth muscle cell differentiation","termid":"GO:2000356"}


id: GO:0019524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keto-D-gluconate metabolic process","termid":"GO:0019525"},{"relation_name":"is_a","term_name":"ketogluconate catabolic process","termid":"GO:0046181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"keto-D-gluconate catabolic process","secondary_identifiers":["MetaCyc:DHGLUCONATE-PYR-CAT-PWY"],"synonyms":[{"name":"keto-D-gluconate breakdown","type":"exact"},{"name":"keto-D-gluconate catabolism","type":"exact"},{"name":"keto-D-gluconate degradation","type":"exact"}],"termid":"GO:0019524"}


id: PBO:0068565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 16, pseudogene","termid":"PBO:0068565"}


id: PBO:0073593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHOC2 leucine rich repeat scaffold protein","termid":"PBO:0073593"}


id: PATO:0001592
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased curvature","termid":"PATO:0001592"}


id: PBO:0075387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP2 antisense RNA 1","termid":"PBO:0075387"}


id: GO:0016118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid catabolic process","termid":"GO:0016110"},{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"carotenoid catabolic process","synonyms":[{"name":"carotenoid breakdown","type":"exact"},{"name":"carotenoid catabolism","type":"exact"},{"name":"carotenoid degradation","type":"exact"}],"termid":"GO:0016118"}


id: GO:1905181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of urease activity.","definition_xrefs":["PMID:16244137","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of urease activity (obsolete GO:1905181)","synonyms":[{"name":"regulation of urea amidohydrolase activity","type":"exact"}],"termid":"GO:1905181"}


id: PBO:0048430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta 1","termid":"PBO:0048430"}


id: GO:1903110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GOC:bhm","GO_REF:0000058","GOC:TermGenie","PMID:24339919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"}


id: MONDO:1011836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, non-human animal","secondary_identifiers":["OMIA:000177"],"termid":"MONDO:1011836","xrefs":{"Monarch":{"xref_id":"1011836"}}}


id: FYPO:0001226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and contains a single nucleus and an asymmetrically located septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell with mislocalized septum and anucleate compartment","termid":"FYPO:0007652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0000631","FYPO:0000641","FYPO:0000337","FYPO:0000138","FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable mononucleate vegetative cell with mislocalized septum and anucleate compartment","synonyms":[{"name":"inviable mononucleate cell with mislocalized septum during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with mislocalized septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with abnormal septum location","type":"exact"},{"name":"inviable mononucleate vegetative cell with abnormal septum position","type":"exact"},{"name":"inviable mononucleate vegetative cell with asymmetric septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with asymmetrically located septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with mislocalised septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with mislocalized septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with mislocalized septum during mitotic cell cycle","type":"related"},{"name":"inviable mononucleate vegetative cell with misplaced septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with single mislocalized septum","type":"exact"},{"name":"lethal; mononucleate vegetative cell with mislocalized septum","type":"exact"}],"termid":"FYPO:0001226"}


id: MONDO:0002831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the sinonasal tract characterized by a plexiform or ribbon-like growth pattern, cytological atypia, and lack of histological evidence of keratinization.","definition_xrefs":["NCIT:C54287"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"maxillary sinus carcinoma","termid":"MONDO:0001748"},{"relation_name":"is_a","term_name":"nasal cavity and paranasal sinus squamous cell carcinoma","termid":"MONDO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-keratinizing sinonasal squamous cell carcinoma","secondary_identifiers":["MEDGEN:83119","ONCOTREE:SNSC","UMLS:C0334270","ICDO:8121/3","DOID:4003"],"synonyms":[{"name":"Ringertz carcinoma","type":"related"},{"name":"Schneiderian carcinoma","type":"related"},{"name":"Sinonasal Schneiderian carcinoma","type":"related"},{"name":"Sinonasal cylindrical cell carcinoma","type":"related"},{"name":"Sinonasal transitional cell carcinoma","type":"related"},{"name":"cylindrical cell carcinoma","type":"exact"},{"name":"non-keratinizing sinonasal squamous cell carcinoma","type":"exact"},{"name":"sinonasal squamous cell carcinoma","type":"related"}],"termid":"MONDO:0002831","xrefs":{"Monarch":{"xref_id":"0002831"}}}


id: MONDO:0016988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperinsulinism due to HNF4A deficiency is a form of diazoxide-sensitive diffuse hyperinsulinism (DHI), characterized by macrosomia, transient or persistent hyperinsulinemic hypoglycemia (HH), responsiveness to diazoxide and a propensity to develop maturity-onset diabetes of the young subtype 1 (MODY-1).","definition_xrefs":["Orphanet:263455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"hyperinsulinism due to HNF4A deficiency","secondary_identifiers":["UMLS:C4274078","MEDGEN:894506","SCTID:717048002","GARD:20903"],"synonyms":[{"name":"hyperinsulinemic hypoglycemia due to HNF4A deficiency","type":"exact"}],"termid":"MONDO:0016988","xrefs":{"Monarch":{"xref_id":"0016988"}}}


id: GO:0051436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of ubiquitin ligase activity that contributes to the mitotic cell cycle.","definition_xrefs":["GOC:ai","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle (obsolete GO:0051436)","synonyms":[{"name":"APC inhibition during mitotic cell cycle","type":"narrow"},{"name":"anaphase promoting complex inhibition during mitotic cell cycle","type":"narrow"},{"name":"anaphase-promoting complex inhibition during mitotic cell cycle","type":"narrow"},{"name":"down regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"down-regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"downregulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"inhibition of ubiquitin ligase activity during mitotic cell cycle","type":"narrow"},{"name":"mitotic APC inhibition","type":"narrow"},{"name":"mitotic APC inhibitor","type":"narrow"},{"name":"mitotic SCF complex inhibitor","type":"narrow"},{"name":"mitotic anaphase promoting complex inhibition","type":"narrow"},{"name":"mitotic anaphase promoting complex inhibitor","type":"narrow"},{"name":"mitotic anaphase-promoting complex inhibition","type":"narrow"},{"name":"mitotic anaphase-promoting complex inhibitor","type":"narrow"},{"name":"mitotic ubiquitin ligase inhibitor","type":"narrow"},{"name":"negative regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle","type":"related"}],"termid":"GO:0051436"}


id: PBO:0004234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh1","termid":"PBO:0004234"}


id: PBO:0080048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 21","termid":"PBO:0080048"}


id: PATO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence which is lower than normal.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fluorescent","termid":"PATO:0001290"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased fluorescence","synonyms":[{"name":"low fluorescence","type":"exact"}],"termid":"PATO:0001927"}


id: PBO:0091196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys","termid":"PBO:0091196"}


id: PBO:0071478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 19","termid":"PBO:0071478"}


id: PBO:0058017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3943","termid":"PBO:0058017"}


id: MONDO:0022098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Catamenial pneumothorax is an extremely rare condition that affects women. Pneumothorax is the medical term for a collapsed lung, a condition in which air or gas is trapped in the space surrounding the lungs causing the lungs to collapse. Women with catamenial pneumothorax have recurrent episodes of pneumothorax that occur within 72 hours before or after the start of menstruation. The exact cause of catamenial pneumothorax is unknown and several theories have been proposed. Many cases are associated with the abnormal development of endometrial tissue outside of the uterus (endometriosis). Some believe that catamenial pneumothorax is the most common form of thoracic endometriosis (a condition in which the endometrial tissue grows in or around the lungs). A diagnosis of catamenial pneumothorax is usually suspected when a woman of reproductive age and with endometriosis has episodes of pneumothorax.Treatment is with hormones and surgery.","definition_xrefs":["GARD:0009858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax","termid":"MONDO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catamenial pneumothorax","secondary_identifiers":["SCTID:233642001","MESH:C538279","MEDGEN:83298","UMLS:C0340007","icd11.foundation:1744257132"],"synonyms":[{"name":"catamenial pneumothorax","type":"exact"},{"name":"premenstrual pneumothorax","type":"related"}],"termid":"MONDO:0022098","xrefs":{"Monarch":{"xref_id":"0022098"}}}


id: GO:1900167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glial cell-derived neurotrophic factor production.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of glial cell-derived neurotrophic factor production","termid":"GO:1900166"},{"relation_name":"negatively_regulates","term_name":"glial cell-derived neurotrophic factor production","termid":"GO:0044467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell-derived neurotrophic factor production","synonyms":[{"name":"inhibition of GDNF secretion","type":"narrow"},{"name":"inhibition of glial cell line-derived neurotrophic factor secretion","type":"narrow"},{"name":"negative regulation of GDNF secretion","type":"exact"},{"name":"negative regulation of glial cell line-derived neurotrophic factor secretion","type":"related"},{"name":"negative regulation of glial cell-derived neurotrophic factor secretion","type":"narrow"}],"termid":"GO:1900167"}


id: GO:0021861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells of the neural tube give rise to radial glial cells, specialized bipotential progenitors cells of the forebrain. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","PMID:16226447","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial glial cell differentiation","termid":"GO:0060019"},{"relation_name":"part_of","term_name":"forebrain generation of neurons","termid":"GO:0021872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain radial glial cell differentiation","synonyms":[{"name":"radial glial cell differentiation in forebrain","type":"exact"}],"termid":"GO:0021861"}


id: PBO:0002799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk16 (predicted)","termid":"PBO:0002799"}


id: GO:0102109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricaffeoyl spermidine + 3 S-adenosyl-L-methionine = 3 H+ + triferuloyl spermidine + 3 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:19077165","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tricaffeoyl spermidine O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11261"],"termid":"GO:0102109"}


id: GO:0036094
data:
  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id: GO:0046095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyinosine, hypoxanthine deoxyriboside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyinosine metabolic process","termid":"GO:0046094"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside biosynthetic process","termid":"GO:0046123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyinosine biosynthetic process","synonyms":[{"name":"deoxyinosine anabolism","type":"exact"},{"name":"deoxyinosine biosynthesis","type":"exact"},{"name":"deoxyinosine formation","type":"exact"},{"name":"deoxyinosine synthesis","type":"exact"}],"termid":"GO:0046095"}


id: PBO:0051243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-62-1 (pseudogene)","termid":"PBO:0051243"}


id: GO:0090295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:rb","GOC:mah","PMID:19104072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"catabolite repression","termid":"GO:0061984"},{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription","termid":"GO:0090293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"nitrogen catabolite repression of transcription","synonyms":[{"name":"negative regulation of transcription by nitrogen catabolites","type":"exact"},{"name":"nitrogen catabolite repression","type":"exact"}],"termid":"GO:0090295"}


id: FYPO:0006977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the ubiquitination of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein ubiquitination","synonyms":[{"name":"abnormal protein ubiquitinylation","type":"related"},{"name":"abnormal protein ubiquitylation","type":"exact"}],"termid":"FYPO:0006977"}


id: PBO:0075490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily E member 3, pseudogene","termid":"PBO:0075490"}


id: PBO:0085859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YLR108C is not an esssential gene; protein abundance increases in response to DNA replication stress; YLR108C has a paralog, YDR132C, that arose from the whole genome duplication","termid":"PBO:0085859"}


id: PBO:0066359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REST corepressor 3","termid":"PBO:0066359"}


id: GO:0010486
data:
  {"annotated_genes":["SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90713],"is_not":false,"summary":null,"term":"GO:0010486"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Mn2+(in) + H+(out) = Mn2+(out) + H+(in).","definition_xrefs":["PMID:17559518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"manganese:proton antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"manganese:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0010486","terms_by_termid":{"GO:0010486":null}}


id: PBO:0059279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37 pseudogene 1","termid":"PBO:0059279"}


id: PBO:0076803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 4","termid":"PBO:0076803"}


id: PBO:0068282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 3","termid":"PBO:0068282"}


id: GO:0019034
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specific locations and structures in the virus infected cell involved in replicating the viral genome.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral replication complex","termid":"GO:0019034"}


id: GO:0047922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dihydroxybenzoate + O2 = 3-maleylpyruvate + H+.","definition_xrefs":["EC:1.13.11.4","RHEA:18237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gentisate 1,2-dioxygenase activity","secondary_identifiers":["MetaCyc:GENTISATE-12-DIOXYGENASE-RXN","KEGG_REACTION:R02656"],"synonyms":[{"name":"2,5-dihydroxybenzoate dioxygenase activity","type":"related"},{"name":"gentisate dioxygenase activity","type":"related"},{"name":"gentisate oxygenase activity","type":"related"},{"name":"gentisate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"gentisic acid oxidase activity","type":"related"}],"termid":"GO:0047922"}


id: GO:0045780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone resorption.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone resorption","termid":"GO:0045124"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"bone resorption","termid":"GO:0045453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone resorption","synonyms":[{"name":"activation of bone resorption","type":"narrow"},{"name":"stimulation of bone resorption","type":"narrow"},{"name":"up regulation of bone resorption","type":"exact"},{"name":"up-regulation of bone resorption","type":"exact"},{"name":"upregulation of bone resorption","type":"exact"}],"termid":"GO:0045780"}


id: PBO:0047659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 10","termid":"PBO:0047659"}


id: GO:0048100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the wing disc, a precursor to the wing.","definition_xrefs":["PMID:10625531","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"},{"relation_name":"is_a","term_name":"wing disc pattern formation","termid":"GO:0035222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc anterior/posterior pattern formation","termid":"GO:0048100"}


id: PBO:0078641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA component interacting RNase","termid":"PBO:0078641"}


id: GO:1904664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of N-terminal peptidyl-methionine acetylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20807799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein acetylation","termid":"GO:1901984"},{"relation_name":"is_a","term_name":"negative regulation of protein maturation","termid":"GO:1903318"},{"relation_name":"is_a","term_name":"regulation of N-terminal peptidyl-methionine acetylation","termid":"GO:1904663"},{"relation_name":"negatively_regulates","term_name":"N-terminal peptidyl-methionine acetylation","termid":"GO:0017196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"negative regulation of N-terminal peptidyl-methionine acetylation","termid":"GO:1904664"}


id: PBO:0091267
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc25 can modulate the probability of entering mitosis at a given cell size","termid":"PBO:0091267"}


id: PBO:0051712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSC spindle orientation adaptor protein","termid":"PBO:0051712"}


id: PBO:0090261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex catalytic subunit","termid":"PBO:0090261"}


id: MONDO:0004551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of a congenital diverticulum of the lower intestine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine diverticulitis","termid":"MONDO:0001229"},{"relation_name":"is_a","term_name":"enteritis","termid":"MONDO:0043579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Meckel diverticulitis","secondary_identifiers":["icd11.foundation:543494453","MEDGEN:75634","SCTID:48241004","UMLS:C0267497","NCIT:C27300","DOID:8408"],"synonyms":[{"name":"Meckel diverticulitis","type":"exact"},{"name":"Meckel's diverticulitis","type":"related"},{"name":"Meckel's diverticulum inflammation","type":"exact"},{"name":"inflammation of Meckel's diverticulum","type":"exact"}],"termid":"MONDO:0004551","xrefs":{"Monarch":{"xref_id":"0004551"}}}


id: GO:0120094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of crotonylation of a lysine residue in a protein.","definition_xrefs":["PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine crotonylation","termid":"GO:0120093"},{"relation_name":"negatively_regulates","term_name":"peptidyl-lysine crotonylation","termid":"GO:0140066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-lysine crotonylation","termid":"GO:0120094"}


id: PBO:0029395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029395"}


id: PBO:0086941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein; involved in nuclear protein import and RNA export, ubiquitin-mediated protein degradation during the cell cycle; shuttles between the nucleus and cytoplasm; is essential; homolog of human RanBP1","termid":"PBO:0086941"}


id: MONDO:0000677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to visually recognize an object while maintaining the use of non-visual sensory systems such as feeling, tapping, smelling, rocking or flicking the object to recognize the object.","definition_xrefs":["DOID:0060147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semantic agnosia","termid":"MONDO:0000677","xrefs":{"Monarch":{"xref_id":"0000677"}}}


id: MONDO:0019828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pituitary stalk interruption syndrome (PSIS) is a congenital abnormality of the pituitary that is responsible for pituitary deficiency and is usually characterized by the triad of a very thin or interrupted pituitary stalk, an ectopic (or absent) posterior pituitary (EPP) and hypoplasia or aplasia of the anterior pituitary visible on MRI. In some patients the abnormality may be limited to EPP (also called ectopic neurohypophysis) or to an interrupted pituitary stalk.","definition_xrefs":["Orphanet:95496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"non-acquired pituitary hormone deficiency","termid":"MONDO:0019824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary stalk interruption syndrome","secondary_identifiers":["MEDGEN:883774","GARD:13209","UMLS:C4053775","SCTID:715727009","icd11.foundation:1474283222","NCIT:C121150"],"synonyms":[{"name":"PSIS","type":"exact"},{"name":"ectopic neurohypophysis","type":"exact"},{"name":"hypoplastic anterior pituitary, missing stalk, and ectopic posterior pituitary","type":"exact"}],"termid":"MONDO:0019828","xrefs":{"Monarch":{"xref_id":"0019828"}}}


id: MONDO:0011080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stapes fixation (stapedovestibular ankylosis) is a hearing loss condition that appears as a consequence of annular ligament destruction followed by excessive connective tissue production during the healing process. This condition is mainly observed in otosclerosis, but is also found in chronic otitis media with tympanosclerosis, and other rare bone diseases such as Paget's disease and osteogenesis imperfecta (Lobstein disease).","definition_xrefs":["Orphanet:3235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive deafness with stapes fixation","secondary_identifiers":["GARD:5170","MEDGEN:330446","icd11.foundation:1909954882","OMIM:601449","SCTID:715529009","UMLS:C1832354","MESH:C563316"],"synonyms":[{"name":"Stapedo-vestibular ankylosis","type":"exact"},{"name":"Thies Reis syndrome","type":"related"},{"name":"Thies-Reis syndrome","type":"exact"},{"name":"deafness, progressive, with stapes fixation","type":"related"}],"termid":"MONDO:0011080","xrefs":{"Monarch":{"xref_id":"0011080"}}}


id: FYPO:0004445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane does not occur, and the protein is instead present in the plasma membrane, during the second meiotic nuclear division.","definition_xrefs":["PMID:21832151","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to prospore membrane","termid":"FYPO:0000677"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to prospore membrane during meiosis II with protein mislocalized to plasma membrane","synonyms":[{"name":"abolished protein localisation to prospore membrane during meiosis II with protein mislocalised to plasma membrane","type":"exact"},{"name":"abolished protein localization to forespore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"},{"name":"abolished protein localization to prospore membrane during second meiotic nuclear division with protein mislocalized to plasma membrane","type":"exact"},{"name":"abolished protein localization to prospore membrane with protein mislocalized to plasma membrane during meiosis II","type":"related"},{"name":"protein localization to prospore membrane abolished during meiosis II with protein mislocalized to plasma membrane","type":"exact"}],"termid":"FYPO:0004445"}


id: PBO:0084665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial acetyl-coenzyme A carboxylase; catalyzes production of malonyl-CoA in mitochondrial fatty acid biosynthesis; relocalizes from mitochondrion to cytoplasm upon DNA replication stress; genetic and comparative analysis suggests that translation begins at a non-canonical (Ile) start codon at -372 relative to the annotated start codon","termid":"PBO:0084665"}


id: PBO:0048979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 2 like","termid":"PBO:0048979"}


id: GO:0140092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A brain-specific SWI/SNF-type complex that contains eight or nine proteins, including both conserved (core) and nonconserved components; contains the ATPase product of either the SMARCA4/BAF190A/BRG1 gene, the mammalian ortholog of the yeast SNF2 gene, or the SMARCA2/BAF190B/BRM gene, the mammalian ortholog of the Drosophila brm (brahma) gene, or an ortholog of either of these genes. Compared to the neuron-specific nBAF complex (GO:0071565) it does not contain DPF1, DPF3 or SMARCC1 or their orthologs. May contain PB1/BAF180.","definition_xrefs":["GOC:bhm","PMID:15525990","PMID:12368262","PMID:17920018","PMID:17640523","PMID:8895581","PMID:8804307","PMID:12620226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"bBAF complex","synonyms":[{"name":"brain-specific BAF complex","type":"exact"},{"name":"brain-specific SWI/SNF complex","type":"exact"}],"termid":"GO:0140092"}


id: PBO:0054205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1585","termid":"PBO:0054205"}


id: PBO:0029915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_FPP_level","termid":"PBO:0029915"}


id: PR:C6Y4B5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.12 gene.","definition_xrefs":["UniProtKB:C6Y4B5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein SPAC212.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.12","synonyms":[{"name":"Spom972h-SPAC212.12","type":"exact"}],"termid":"PR:C6Y4B5"}


id: PBO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraganglioma","termid":"PBO:0002592"}


id: PBO:0061105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family CARD domain containing 3","termid":"PBO:0061105"}


id: SO:0005849
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of a group of genes that are either regulated or transcribed together within a larger group of genes that are regulated or transcribed together.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_array_member","termid":"SO:0000081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_subarray_member","synonyms":[{"name":"gene subarray member","type":"exact"}],"termid":"SO:0005849"}


id: GO:0150110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cholesterol esterification.","definition_xrefs":["PMID:21810484","GOC:aruk","PMID:24201375","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cholesterol esterification (obsolete GO:0150110)","termid":"GO:0150110"}


id: MOD:00113
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-geranylgeranyl-L-cysteine.","definition_xrefs":["DeltaMass:0","RESID:AA0104","Unimod:48#C","OMSSA:49","PubMed:1483450","PubMed:15609361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"geranylgeranylated residue","termid":"MOD:00441"},{"relation_name":"is_a","term_name":"isoprenylated cysteine","termid":"MOD:01110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"S-geranylgeranyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2E,6E,10Z)-12-hydroxy-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]sulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(3,7,11,15-tetramethyl-2,6,10,14-hexadecatetraenylthio)propanoic acid","type":"exact"},{"name":"Geranyl-geranyl","type":"related"},{"name":"GeranylGeranyl","type":"related"},{"name":"LIPID S-geranylgeranyl cysteine","type":"exact"},{"name":"S-geranylgeranyl","type":"exact"},{"name":"S-geranylgeranyl-L-cysteine","type":"exact"},{"name":"SGergerCys","type":"exact"},{"name":"geranylgeranylc","type":"exact"}],"termid":"MOD:00113"}


id: GO:1904678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-aminoacyl-tRNA.","definition_xrefs":["ISBN:155581073X","GO_REF:0000067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alpha-aminoacyl-tRNA binding","synonyms":[{"name":"aminoacyl-tRNA binding","type":"related"}],"termid":"GO:1904678"}


id: PBO:0082491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic component of UDP-GlcNAc transferase; required for the second step of dolichyl-linked oligosaccharide synthesis; anchored to the ER membrane via interaction with Alg14p; similar to bacterial and human glycosyltransferases; protein abundance increases in response to DNA replication stress; both human homologs ALG13 and ALG14 are required to complement yeast alg13 mutant","termid":"PBO:0082491"}


id: GO:0033209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by tumor necrosis factor binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to tumor necrosis factor","termid":"GO:0071356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"tumor necrosis factor-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-75893","Reactome:R-HSA-5668541"],"synonyms":[{"name":"TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"adipocytokine signaling pathway","type":"related"},{"name":"tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"tumor necrosis factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0033209"}


id: GO:0044718
data:
  {"annotated_genes":["SJAG_03667","SJAG_02735","SJAG_02834"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61617,61726,68713,110231,110232],"is_not":false,"summary":null,"term":"GO:0044718"}]},"cv_name":"biological_process","definition":"The directed movement of siderophores, low molecular weight Fe(III)-chelating substances, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"},{"relation_name":"is_a","term_name":"iron ion transmembrane transport","termid":"GO:0034755"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null,"SJAG_03667":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"siderophore transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"siderophore membrane transport","type":"exact"}],"termid":"GO:0044718","terms_by_termid":{"GO:0044718":null}}


id: GO:0102456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-sinapoyl-beta-D-glucose = cyanin betaine + trans-sinapate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 5-O-glucosyltransferase (sinapoyl-glucose dependent) activity (obsolete GO:0102456)","termid":"GO:0102456"}


id: GO:0002124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior performed in defence of a fixed area against intruders, typically conspecifics.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"territorial aggressive behavior","synonyms":[{"name":"territorial aggression","type":"exact"}],"termid":"GO:0002124"}


id: MONDO:0004766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute exacerbation of asthma, characterized by inadequate response to initial bronchodilators.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"status asthmaticus","secondary_identifiers":["EFO:0008590","ICD9:493.91","UMLS:C0038218","NCIT:C122577","MEDGEN:11584","SCTID:708090002","DOID:9362","MESH:D013224"],"synonyms":[{"name":"asthma with status asthmaticus","type":"exact"},{"name":"severe asthma attack","type":"exact"}],"termid":"MONDO:0004766","xrefs":{"Monarch":{"xref_id":"0004766"}}}


id: PBO:0044695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-dopachrome tautomerase pseudogene 1","termid":"PBO:0044695"}


id: PBO:0109658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane fission complex receptor Fis1","termid":"PBO:0109658"}


id: PBO:0080702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 6","termid":"PBO:0080702"}


id: PBO:0030213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_oxidative_stress","termid":"PBO:0030213"}


id: PBO:0042029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 86","termid":"PBO:0042029"}


id: PBO:0089238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP6 subunit Alp16","termid":"PBO:0089238"}


id: GO:0007030
data:
  {"annotated_genes":["SJAG_00284","SJAG_01459","SJAG_04598","SJAG_04196","SJAG_04528","SJAG_01467","SJAG_01633","SJAG_03670","SJAG_01003","SJAG_03270","SJAG_01516","SJAG_00578","SJAG_02120","SJAG_04023","SJAG_00557","SJAG_00357","SJAG_01571"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89788,91618,93769,95018,96138,96198,98218,101671,102953,103762,108954,115788,118239],"is_not":false,"summary":null,"term":"GO:0007030"},{"annotations":[117065,107493,95057,109271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus.","definition_xrefs":["GOC:mah","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00357":null,"SJAG_00557":null,"SJAG_00578":null,"SJAG_01003":null,"SJAG_01459":null,"SJAG_01467":null,"SJAG_01516":null,"SJAG_01571":null,"SJAG_01633":null,"SJAG_02120":null,"SJAG_03270":null,"SJAG_03670":null,"SJAG_04023":null,"SJAG_04196":null,"SJAG_04528":null,"SJAG_04598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi apparatus organization","type":"exact"},{"name":"Golgi organisation","type":"exact"},{"name":"Golgi organization and biogenesis","type":"related"}],"termid":"GO:0007030","terms_by_termid":{"GO:0007030":null,"GO:0048280":null}}


id: PBO:0073994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 3 pseudogene 1","termid":"PBO:0073994"}


id: PBO:0001620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase (predicted)","termid":"PBO:0001620"}


id: PR:O94682
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis20 gene.","definition_xrefs":["UniProtKB:O94682","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C776.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.16","synonyms":[{"name":"Spom972h-mis20","type":"exact"}],"termid":"PR:O94682"}


id: PBO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic shuttling protein","termid":"PBO:0000205"}


id: MONDO:0020360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated cryptophthalmia","termid":"MONDO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"complete cryptophthalmia","secondary_identifiers":["DOID:0111719","icd11.foundation:162797488","MEDGEN:1773866","Orphanet:98949","GARD:16876","UMLS:C5437887"],"termid":"MONDO:0020360","xrefs":{"Monarch":{"xref_id":"0020360"}}}


id: SO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short tandem repeat variant containing more repeat units than the reference sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"short_tandem_repeat_change","termid":"SO:0002161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short_tandem_repeat_expansion","synonyms":[{"name":"short tandem repeat expansion","type":"exact"},{"name":"str expansion","type":"exact"}],"termid":"SO:0002162"}


id: PBO:0077502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 220","termid":"PBO:0077502"}


id: MONDO:1011112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, pig","secondary_identifiers":["OMIA:000243-9823"],"termid":"MONDO:1011112","xrefs":{"Monarch":{"xref_id":"1011112"}}}


id: PBO:0034320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_transport_along","termid":"PBO:0034320"}


id: GO:0070850
data:
  {"annotated_genes":["SJAG_02761","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99870,118094],"is_not":false,"summary":null,"term":"GO:0070850"}]},"cv_name":"cellular_component","definition":"A protein complex that contains the transforming acidic coiled coil (TACC) protein and the TOG protein (Mia1p/Alp7p and Alp14, respectively, in fission yeast), and is involved in microtubule array remodeling as cells progress through the cell cycle. The TACC/TOG complex is conserved in eukaryotes, associates with microtubules, and shuttles between the nucleus and the cytoplasm during interphase.","definition_xrefs":["PMID:19606211","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02761":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TACC/TOG complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070850","terms_by_termid":{"GO:0070850":null}}


id: FYPO:0008215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of GTPase inhibitor O1 than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to Rho GTPase inhibitor O1","termid":"FYPO:0008215"}


id: MONDO:0012817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.","definition_xrefs":["NCIT:C4817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0021038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Ewing sarcoma","secondary_identifiers":["EFO:0000174","DOID:3369","ICD10CM:C40.2","MEDGEN:107816","icd11.foundation:458106328","OMIM:612219","MESH:D012512","NCIT:C9341","NANDO:2200053","GARD:6390","ICD10CM:C40.3","ICD10CM:C40.1","ICDO:9260/3","NCIT:C7542","ONCOTREE:ES","Orphanet:319","MedDRA:10015560","UMLS:C0553580"],"synonyms":[{"name":"ES","type":"exact"},{"name":"Ewing sarcoma","type":"exact"},{"name":"Ewing tumor","type":"related"},{"name":"Ewing tumour","type":"related"},{"name":"Ewing's family localised tumour","type":"exact"},{"name":"Ewing's family localized tumor","type":"exact"},{"name":"Ewing's sarcoma","type":"exact"},{"name":"Ewing's sarcoma/peripheral primitive neuroectodermal tumour","type":"related"},{"name":"Ewing's tumor","type":"exact"},{"name":"Ewing's tumour","type":"exact"},{"name":"Ewings sarcoma","type":"exact"},{"name":"Ewings sarcoma-primitive neuroectodermal tumor","type":"related"},{"name":"Ewings sarcoma-primitive neuroectodermal tumour","type":"related"},{"name":"PNET of Thoracopulmonary region","type":"exact"},{"name":"localised Ewing sarcoma","type":"related"},{"name":"localised Ewing's sarcoma","type":"related"},{"name":"localised Ewing's sarcoma/peripheral primitive neuroectodermal tumour","type":"related"},{"name":"localised Ewing's tumour","type":"related"},{"name":"localised peripheral primitive neuroectodermal tumour","type":"related"},{"name":"localized Ewing sarcoma","type":"related"},{"name":"localized Ewing's sarcoma","type":"related"},{"name":"localized Ewing's sarcoma/peripheral primitive neuroectodermal tumor","type":"related"},{"name":"localized Ewing's tumor","type":"related"},{"name":"localized peripheral primitive neuroectodermal tumor","type":"related"},{"name":"neuroepithelioma","type":"related"},{"name":"neuroepithelioma, peripheral","type":"related"},{"name":"peripheral primitive neuroectodermal tumour","type":"related"},{"name":"sarcoma, Ewing's","type":"related"}],"termid":"MONDO:0012817","xrefs":{"Monarch":{"xref_id":"0012817"}}}


id: PBO:0062390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 11 pseudogene","termid":"PBO:0062390"}


id: GO:0045891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription of homeotic genes of the trithorax group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription of homeotic gene (trithorax group) (obsolete GO:0045891)","synonyms":[{"name":"negative regulation of transcription of homeotic gene (trithorax group)","type":"exact"}],"termid":"GO:0045891"}


id: PBO:0045290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 41","termid":"PBO:0045290"}


id: PBO:0076818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 4","termid":"PBO:0076818"}


id: PBO:0039549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD44 divergent transcript","termid":"PBO:0039549"}


id: MONDO:0014955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reticular dystrophy of the retinal pigment epithelium","termid":"MONDO:0009979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"RCBTB1-related retinopathy","secondary_identifiers":["UMLS:C4310680","OMIM:617175","GARD:18241","MEDGEN:934647"],"synonyms":[{"name":"RCBTB1-related retinopathy","type":"exact"},{"name":"RDEOA","type":"exact"},{"name":"retinal dystrophy with or without extraocular anomalies","type":"exact"}],"termid":"MONDO:0014955","xrefs":{"Monarch":{"xref_id":"0014955"}}}


id: PBO:0075823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCO-spondin, pseudogene","termid":"PBO:0075823"}


id: PBO:0088749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc1","termid":"PBO:0088749"}


id: PR:O60112
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15C4.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Rab geranylgeranyltransferase C15C4.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.03","synonyms":[{"name":"Spom972h-SPBC15C4.03","type":"exact"}],"termid":"PR:O60112"}


id: PBO:0060587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 26","termid":"PBO:0060587"}


id: PBO:0058675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6803","termid":"PBO:0058675"}


id: GO:0001161
data:
  {"annotated_genes":["SJAG_03519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001162"}]},"cv_name":"molecular_function","definition":"Binding to an intronic DNA sequence that regulates the transcription of the transcript it is contained within.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0000976","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"intronic transcription regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044213"],"synonyms":[{"name":"intronic transcription regulatory region DNA binding","type":"related"}],"termid":"GO:0001161","terms_by_termid":{"GO:0001162":null}}


id: PBO:0017575
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hmg protein counteracting Adriamycin in Pombe","termid":"PBO:0017575"}


id: MONDO:1011088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal dysplasia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal dysplasia, non-human animal","termid":"MONDO:1010268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal dysplasia, domestic cat","secondary_identifiers":["OMIA:001135-9685"],"termid":"MONDO:1011088","xrefs":{"Monarch":{"xref_id":"1011088"}}}


