# terms

id: GO:1902273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (R)-carnitine transmembrane transport.","definition_xrefs":["PMID:23755272","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of (R)-carnitine transmembrane transport","termid":"GO:1902272"},{"relation_name":"negatively_regulates","term_name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of (R)-carnitine transmembrane transport","synonyms":[{"name":"down regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"down-regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"downregulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"inhibition of (R)-carnitine transmembrane transport","type":"narrow"}],"termid":"GO:1902273"}


id: GO:0052781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any chitobiose, a family of compounds derived from chitin and based on the structure of D-glucosaminyl-(1->4)-D-glucosamine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitobiose metabolic process","termid":"GO:0052780"},{"relation_name":"is_a","term_name":"amino disaccharide catabolic process","termid":"GO:0052782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitobiose catabolic process","termid":"GO:0052781"}


id: PBO:0042990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 3","termid":"PBO:0042990"}


id: MONDO:0010468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial berry aneurysm","termid":"MONDO:0016483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm, intracranial berry, 5","secondary_identifiers":["GARD:18321","UMLS:C1835857","MEDGEN:324377","MESH:C563670","DOID:0080968","OMIM:300870"],"synonyms":[{"name":"ANIB5","type":"exact"},{"name":"aneurysm, intracranial BERRY, 5","type":"related"}],"termid":"MONDO:0010468","xrefs":{"Monarch":{"xref_id":"0010468"}}}


id: PBO:0034218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bounding_layer_of","termid":"PBO:0034218"}


id: MONDO:0010188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ataxia with vitamin E deficiency (AVED) is a neurodegenerative disease belonging to the inherited cerebellar ataxias. It is mainly characterized by progressive spino-cerebellar ataxia, loss of proprioception, areflexia, and is associated with a marked deficiency in vitamin E.","definition_xrefs":["Orphanet:96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"familial isolated deficiency of vitamin E","secondary_identifiers":["NORD:817","MEDGEN:341248","NANDO:1200050","GARD:8595","SCTID:702442008","DOID:0090028","MedDRA:10047631","OMIM:277460","UMLS:C1848533","ICD9:334.3","ICD9:269.1","MESH:C535393"],"synonyms":[{"name":"AVED","type":"exact"},{"name":"Ataxia with Vitamin E Deficiency","type":"exact"},{"name":"Friedreich-like ataxia","type":"exact"},{"name":"Friedreich-like ataxia with selective vitamin E deficiency","type":"related"},{"name":"VED","type":"related"},{"name":"ataxia with isolated vitamin E deficiency","type":"exact"},{"name":"ataxia with vitamin E deficiency","type":"related"},{"name":"ataxia, Friedreich-like, with selective vitamin E deficiency","type":"related"},{"name":"familial isolated deficiency of vitamin type E","type":"exact"},{"name":"familial isolated vitamin E deficiency","type":"exact"},{"name":"isolated vitamin E deficiency","type":"exact"},{"name":"vitamin E, familial isolated deficiency OF","type":"related"}],"termid":"MONDO:0010188","xrefs":{"Monarch":{"xref_id":"0010188"}}}


id: GO:1905018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of methionine-tRNA ligase activity.","definition_xrefs":["PMID:1665486","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of methionine-tRNA ligase activity (obsolete GO:1905018)","synonyms":[{"name":"regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"regulation of MetRS activity","type":"exact"},{"name":"regulation of methionine translase activity","type":"exact"},{"name":"regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905018"}


id: PBO:0005438
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia-telangiectasia","termid":"PBO:0005438"}


id: FYPO:0005273
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118742,118702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[118751,118750,118752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a cell cycle phase transition normally.","definition_xrefs":["PomBase:mah","GO:0044770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle phase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330","SJAG_03575","SJAG_01956","SJAG_03351"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","mad2delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0005273","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: MONDO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract disease in which the cataract contains some transparent protein","definition_xrefs":["Wikipedia:Cataract"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"immature cataract","secondary_identifiers":["SCTID:446474007","icd11.foundation:1444156961","MEDGEN:755282","DOID:10997","UMLS:C2960113"],"synonyms":[{"name":"incipient cataract","type":"exact"},{"name":"incipient senile cataract","type":"exact"},{"name":"water clefts","type":"exact"}],"termid":"MONDO:0001175","xrefs":{"Monarch":{"xref_id":"0001175"}}}


id: PBO:0089144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorelay sensor kinase Mak3","termid":"PBO:0089144"}


id: MONDO:0001250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eye disorder that results from vitamin A deficiency, with basis in disruption of maintenance of the specialized epithelial surfaces, leading to atrophic changes in the normal mucosal surface, with loss of goblet cells, and replacement of the normal epithelium by an inappropriate keratinized stratified squamous epithelium. In addition, the substantia propria of the cornea breaks down and liquefies, resulting in keratomalacia.","definition_xrefs":["Wikipedia:Keratomalacia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratomalacia","secondary_identifiers":["MESH:C536156","DOID:11267","MEDGEN:57777","ICD9:371.45","SCTID:85149007","icd11.foundation:497316188","UMLS:C0152455"],"termid":"MONDO:0001250","xrefs":{"Monarch":{"xref_id":"0001250"}}}


id: PR:Q9P7R4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03894","PANTHER:PTHR24067:SF19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.07c","secondary_identifiers":["UniProtKB:Q9P7R4"],"synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2H","type":"exact"},{"name":"ubiquitin carrier protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7R4"}


id: PBO:0046137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A2 pseudogene 1","termid":"PBO:0046137"}


id: PBO:0004118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1 alpha related protein (predicted)","termid":"PBO:0004118"}


id: PR:Q9P3U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3U7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity hexose transporter ght8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.06c","synonyms":[{"name":"Spom972h-ght8","type":"exact"},{"name":"hexose transporter 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U7"}


id: MONDO:0009845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelviscapular dysplasia (Cousin syndrome) is characterized by the association of pelviscapular dysplasia with epiphyseal abnormalities, congenital dwarfism and facial dysmorphism.","definition_xrefs":["Orphanet:93333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"pelviscapular dysplasia","secondary_identifiers":["UMLS:C1850040","GARD:1555","MEDGEN:342400","MESH:C535550","OMIM:260660","SCTID:719299009"],"synonyms":[{"name":"COUSIN syndrome","type":"related"},{"name":"Cousin syndrome","type":"exact"},{"name":"craniofacial Dysmorphism, hypoplasia of scapula and pelvis, and short stature","type":"related"},{"name":"craniofacial dysmorphism, hypoplasia of scapula and pelvis and short stature","type":"related"},{"name":"familial pelvis-scapular dysplasia","type":"exact"},{"name":"pelviscapular dysplasia","type":"exact"}],"termid":"MONDO:0009845","xrefs":{"Monarch":{"xref_id":"0009845"}}}


id: PR:Q09894
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.07c","synonyms":[{"name":"Spom972h-SPAC24B11.07c","type":"exact"}],"termid":"PR:Q09894"}


id: MONDO:0015382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cysts and fistulae of the face and oral cavity that involves the lower lip.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lip disorder","termid":"MONDO:0004748"},{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower lip fistula","secondary_identifiers":["MEDGEN:698113","GARD:19940","icd11.foundation:230523092","Orphanet:141064","UMLS:C1274792"],"synonyms":[{"name":"cysts and fistulae of the face and oral cavity of lower lip","type":"exact"},{"name":"lower lip cysts and fistulae of the face and oral cavity","type":"exact"}],"termid":"MONDO:0015382","xrefs":{"Monarch":{"xref_id":"0015382"}}}


id: PBO:0088779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery NADPH-dependent diflavin oxidoreductase Tah18","termid":"PBO:0088779"}


id: PBO:0065465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 7 pseudogene 1","termid":"PBO:0065465"}


id: RO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between two linear structures that are approximately parallel to each other for their entire length and where either the two structures are adjacent to each other or one is part of the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coincident_with","termid":"RO:0002008"}


id: PBO:0086023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the YKL050W protein is a target of the SCFCdc4 ubiquitin ligase complex and YKL050W transcription is regulated by Azf1p; YKL050C has a paralog, EIS1, that arose from the whole genome duplication","termid":"PBO:0086023"}


id: PBO:0086481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial transport protein; null mutant is viable, exhibits decreased levels of chitin and normal resistance to calcofluor white","termid":"PBO:0086481"}


id: GO:0008999
data:
  {"annotated_genes":["SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88909],"is_not":false,"summary":null,"term":"GO:0008999"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-alanyl-[protein] = CoA + H+ + N-terminal N(alpha)-acetyl-L-alanyl-[protein].","definition_xrefs":["RHEA:50500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide alpha-N-acetyltransferase activity","termid":"GO:0004596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0034212","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"peptide-alanine-alpha-N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-17860"],"synonyms":[{"name":"acetyl-CoA:ribosomal-protein-L-alanine N-acetyltransferase activity","type":"related"},{"name":"ribosomal protein S18 acetyltransferase activity","type":"related"},{"name":"ribosomal-protein-alanine N-acetyltransferase activity","type":"broad"}],"termid":"GO:0008999","terms_by_termid":{"GO:0008999":null}}


id: SO:0000272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a tyrosine anticodon, and a 3' tyrosine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tyrosine_tRNA_primary_transcript","termid":"SO:0000229"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl_tRNA","synonyms":[{"name":"tyrosyl tRNA","type":"exact"},{"name":"tyrosyl-transfer RNA","type":"related"},{"name":"tyrosyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000272"}


id: GO:0051609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of a neurotransmitter into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"inhibition of neurotransmitter uptake","synonyms":[{"name":"inhibition of neurotransmitter import","type":"exact"}],"termid":"GO:0051609"}


id: GO:0035504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of myosin light chain kinase activity.","definition_xrefs":["GOC:bf","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of myosin light chain kinase activity (obsolete GO:0035504)","termid":"GO:0035504"}


id: PBO:0031631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ascospore_wall_biogenesis","termid":"PBO:0031631"}


id: PBO:0048021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor substrate 2","termid":"PBO:0048021"}


id: PBO:0074745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 105A","termid":"PBO:0074745"}


id: PBO:0088744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane OPT oligopeptide transmembrane transporter family Isp4","termid":"PBO:0088744"}


id: MONDO:0043005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of multiple congenital anomalies/dysmorphic syndrome that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome (obsolete MONDO:0043005)","secondary_identifiers":["Orphanet:183533"],"synonyms":[{"name":"hereditary multiple congenital anomalies/dysmorphic syndrome","type":"exact"}],"termid":"MONDO:0043005","xrefs":{"Monarch":{"xref_id":"0043005"}}}


id: GO:0044482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism which causes damage to the extracellular matrix of the blood vessels of the bitten organism, ultimately resulting in hemorrhage in the bitten organism.","definition_xrefs":["PMID:19485419","GOC:fj","PMID:10441379","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in hemorrhagic damage in another organism","termid":"GO:0044358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in blood vessel extracellular matrix damage, causing hemorrhagic damage in another organism","synonyms":[{"name":"envenomation resulting in blood vessel ECM, causing hemorrhagic damage in other organism","type":"exact"},{"name":"envenomation resulting in blood vessel extracellular matrix damage, causing hemorrhagic damage in other organism","type":"exact"}],"termid":"GO:0044482"}


id: PBO:0060571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 7, pseudogene","termid":"PBO:0060571"}


id: MONDO:0010211
data:
  {"annotated_genes":["SJAG_01887","SJAG_01049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86198,86199],"is_not":false,"summary":null,"term":"MONDO:0010211"}]},"cv_name":"mondo","definition":"An autosomal recessive inherited disorder caused by mutations in the XPC gene. This disease is characterized by increased sensitivity to sunlight with the development of carcinomas at an early age and is caused by a defect in nucleotide excision repair.","definition_xrefs":["NCIT:C114770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"xeroderma pigmentosum group C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2752147","SCTID:25784009","Orphanet:276255","GARD:5626","MESH:C567886","OMIM:278720","MEDGEN:416702","DOID:0110844"],"synonyms":[{"name":"XP group C","type":"exact"},{"name":"XP, Group C","type":"related"},{"name":"XP-C","type":"exact"},{"name":"XP3","type":"exact"},{"name":"XPC","type":"exact"},{"name":"XPCC","type":"exact"},{"name":"xeroderma pigmentosum 3","type":"related"},{"name":"xeroderma pigmentosum III","type":"exact"},{"name":"xeroderma pigmentosum group C","type":"exact"},{"name":"xeroderma pigmentosum group type C","type":"exact"},{"name":"xeroderma pigmentosum, complementation group C","type":"related"},{"name":"xeroderma pigmentosum, complementation group type C","type":"exact"},{"name":"xeroderma pigmentosum, group C","type":"exact"},{"name":"xeroderma pigmentosum, type 3","type":"related"}],"termid":"MONDO:0010211","terms_by_termid":{"MONDO:0010211":null},"xrefs":{"Monarch":{"xref_id":"0010211"}}}


id: PBO:0030306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_cell_growth","termid":"PBO:0030306"}


id: PBO:0081672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 594","termid":"PBO:0081672"}


id: PBO:0059046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylmalonyl-CoA mutase","termid":"PBO:0059046"}


id: FYPO:0007376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a region of the genome that is normally stably assembled and maintained as heterochromatin over successive generations entirely loses heterochromatic structure.","definition_xrefs":["PMID:31278118","PMID:29899117","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal epigenetic heterochromatin inheritance","termid":"FYPO:0007477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0007477"}],"interesting_parent_ids":["FYPO:0007477","FYPO:0001985"],"is_obsolete":false,"name":"abolished epigenetic heterochromatin inheritance","synonyms":[{"name":"abolished PEV","type":"related"},{"name":"abolished epigenetic heterochromatin propagation","type":"exact"},{"name":"abolished epigenetic inheritance of heterochromatin","type":"exact"}],"termid":"FYPO:0007376"}


id: MONDO:0008628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic and dysplastic dilation of the distal ureter within the bladder that may extend into the bladder neck and urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureteral disorder","termid":"MONDO:0001926"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureterocele","secondary_identifiers":["MedDRA:10056433","MEDGEN:21778","SCTID:12818004","OMIM:191650","DOID:4022","NCIT:C123159","UMLS:C0041960","MESH:D014518","NANDO:2200183","HP:0000070","icd11.foundation:408801251","EFO:1001227","ICD9:593.89"],"synonyms":[{"name":"ureterocele","type":"exact"},{"name":"ureterocele (disease)","type":"exact"}],"termid":"MONDO:0008628","xrefs":{"Monarch":{"xref_id":"0008628"}}}


id: PATO:0000012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000012 absolute age (obsolete PATO:0000012)","termid":"PATO:0000012"}


id: GO:0022616
data:
  {"annotated_genes":["SJAG_04190","SJAG_05197","SJAG_04183","SJAG_01823","SJAG_00863","SJAG_04210","SJAG_02818","SJAG_01010","SJAG_04877","SJAG_03780","SJAG_02667","SJAG_00729","SJAG_02182","SJAG_05239","SJAG_00198","SJAG_00874","SJAG_02908","SJAG_00814","SJAG_00618","SJAG_05232","SJAG_00884","SJAG_04879","SJAG_00272","SJAG_05979","SJAG_01762","SJAG_03495","SJAG_02294","SJAG_02690","SJAG_02199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107397],"is_not":false,"summary":null,"term":"GO:0022616"},{"annotations":[114720,106712,114549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006271"},{"annotations":[106449,89087,94770,93465,112598,109406,102313,111720,104401,111960,114851,113008,108567,94736,106815,103707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[96929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006273"},{"annotations":[96930,109408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006272"},{"annotations":[103711,94738,104403,108569,117621,102315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[104404,94771,106450,93467,94739,89088,106817,103712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"},{"annotations":[100138,100993,103637,92069,94560,92158,100102],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The DNA metabolic process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand.","definition_xrefs":["GOC:mah","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00272":null,"SJAG_00618":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02667":null,"SJAG_02690":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA strand elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022616","terms_by_termid":{"GO:0006271":null,"GO:0006272":null,"GO:0006273":null,"GO:0022616":null,"GO:1902983":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null}}


id: GO:0044168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The irregular network of unit membranes, visible only by electron microscopy, that occurs in the host cell cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The host rough ER has ribosomes adhering to the outer surface.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell rough endoplasmic reticulum","synonyms":[{"name":"host rough endoplasmic reticulum","type":"exact"}],"termid":"GO:0044168"}


id: GO:0034094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the association between sister chromatids of a replicated chromosome is maintained during a meiotic cell cycle.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"},{"relation_name":"regulates","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"}


id: PBO:0026992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mannose_level_in_glycoprotein_glycan","termid":"PBO:0026992"}


id: GO:0016759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside-disphosphate-glucose + ((1,4)-beta-D-glucosyl)(n) = nucleoside-disphosphate + ((1,4)-beta-D-glucosyl)(n+1).","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"cellulose synthase activity","synonyms":[{"name":"cellulose synthetase activity","type":"related"}],"termid":"GO:0016759"}


id: PBO:0075991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP family member 1","termid":"PBO:0075991"}


id: PBO:0051978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jade family PHD finger 1","termid":"PBO:0051978"}


id: PBO:0072582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 1","termid":"PBO:0072582"}


id: PBO:0064954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 6","termid":"PBO:0064954"}


id: MONDO:0016353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"palmoplantar keratoderma-hereditary motor and sensory neuropathy syndrome","termid":"MONDO:0007853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma-spastic paralysis syndrome","secondary_identifiers":["Orphanet:2201","MESH:C538358","GARD:3095","MEDGEN:444152","UMLS:C2931828"],"synonyms":[{"name":"Powell-Venencie-Gordon syndrome","type":"exact"},{"name":"keratoderma palmoplantar spastic paralysis","type":"related"},{"name":"palmoplantar hyperkeratosis-spastic paralysis syndrome","type":"exact"}],"termid":"MONDO:0016353","xrefs":{"Monarch":{"xref_id":"0016353"}}}


id: PBO:0090377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic fizzy-related APC coactivator Fzr2","termid":"PBO:0090377"}


id: PBO:0044717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 4 (pseudogene)","termid":"PBO:0044717"}


id: PBO:0059909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 32","termid":"PBO:0059909"}


id: GO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal tripeptide from a polypeptide at neutral pH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tripeptidyl-peptidase II activity (obsolete GO:0004294)","synonyms":[{"name":"tripeptidyl-peptidase II activity","type":"exact"}],"termid":"GO:0004294"}


id: GO:0090051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood vessel endothelial cell migration","termid":"GO:0043537"},{"relation_name":"is_a","term_name":"regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090049"},{"relation_name":"negatively_regulates","term_name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090051"}


id: GO:0042748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"All sleep stages in the circadian sleep/wake cycle other than REM sleep. These stages are characterized by a slowing of brain waves and other physiological functions.","definition_xrefs":["PMID:33537937","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian sleep/wake cycle process","termid":"GO:0022410"},{"relation_name":"part_of","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}


id: MONDO:0009192
data:
  {"annotated_genes":["SJAG_00690","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85222,85223],"is_not":false,"summary":null,"term":"MONDO:0009192"}]},"cv_name":"mondo","definition":"Wolcott-Rallison syndrome (WRS) is a very rare genetic disease, characterized by permanent neonatal diabetes mellitus (PNDM) with multiple epiphyseal dysplasia and other clinical manifestations, including recurrent episodes of acute liver failure.","definition_xrefs":["Orphanet:1667"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"Wolcott-Rallison syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:140926","UMLS:C0432217","DOID:0090060","icd11.foundation:2096915129","GARD:5589","OMIM:226980","SCTID:254066006","NCIT:C131007","MESH:C536739"],"synonyms":[{"name":"IDDM-MED syndrome","type":"related"},{"name":"Iddm-Med syndrome","type":"related"},{"name":"MED-IDDM syndrome","type":"related"},{"name":"Med-Iddm syndrome","type":"related"},{"name":"WRS","type":"exact"},{"name":"Wolcott Rallison syndrome","type":"related"},{"name":"Wolcott-Rallison syndrome","type":"exact"},{"name":"early-onset diabetes mellitus with multiple epiphyseal dysplasia","type":"exact"},{"name":"epiphyseal dysplasia multiple with early-onset diabetes mellitus","type":"related"},{"name":"epiphyseal dysplasia, multiple, with early-onset diabetes mellitus","type":"related"}],"termid":"MONDO:0009192","terms_by_termid":{"MONDO:0009192":null},"xrefs":{"Monarch":{"xref_id":"0009192"}}}


id: PBO:0069938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1231, pseudogene","termid":"PBO:0069938"}


id: PBO:0008485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A-type phosphatase inhibitor Sds23/Moc1","termid":"PBO:0008485"}


id: MONDO:0004989
data:
  {"annotated_genes":["SJAG_02426","SJAG_01410","SJAG_04394","SJAG_04206","SJAG_00079","SJAG_02460","SJAG_00757","SJAG_03453","SJAG_04502","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85725,85727,85728,85729,86846,86848,85726,86850,86849,86847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"}]},"cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the breast","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"breast cancer","termid":"MONDO:0007254"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00757":null,"SJAG_01410":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_03453":null,"SJAG_03720":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C4872","SCTID:254838004","UMLS:C0678222","DOID:3459","EFO:0000305","MEDGEN:146260"],"synonyms":[{"name":"breast cancer","type":"broad"},{"name":"breast cancer, NOS","type":"broad"},{"name":"breast carcinoma","type":"exact"},{"name":"cancer of breast","type":"broad"},{"name":"cancer of the breast","type":"broad"},{"name":"cancer, breast","type":"broad"},{"name":"carcinoma of breast","type":"exact"},{"name":"carcinoma of the breast","type":"exact"},{"name":"mammary carcinoma","type":"exact"}],"termid":"MONDO:0004989","terms_by_termid":{"MONDO:0016419":null},"xrefs":{"Monarch":{"xref_id":"0004989"}}}


id: PBO:0051837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunity related GTPase M","termid":"PBO:0051837"}


id: PBO:0050949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha and beta receptor subunit 1","termid":"PBO:0050949"}


id: PATO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of whether the bearer's disposition to perceive differences between two or more stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discrimination","termid":"PATO:0000189"}


id: GO:0040008
data:
  {"annotated_genes":["SJAG_03705","SJAG_00244","SJAG_03602","SJAG_03486","SJAG_00216","SJAG_03581","SJAG_00514","SJAG_02169","SJAG_02838","SJAG_02723","SJAG_02392","SJAG_04724","SJAG_01456","SJAG_04322"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95351,89375,94083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[87570,102975,106319,115926,99239,117343,110212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[90240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[106120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030307"},{"annotations":[114492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"},{"annotations":[97938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development.","definition_xrefs":["GOC:mah","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"growth","termid":"GO:0040007"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_01456":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03602":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0040008","terms_by_termid":{"GO:0030307":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061387":null}}


id: PBO:0082530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-1 has a paralog, ASP3-3, that arose from a segmental duplication","termid":"PBO:0082530"}


id: PBO:0088365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolin, nucleolar histone chaperone required for rRNA metabolism","termid":"PBO:0088365"}


id: MONDO:0000640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroectodermal tumor that involves the central nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"primitive neuroectodermal tumor","termid":"MONDO:0005462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system primitive neuroectodermal neoplasm","secondary_identifiers":["DOID:0060103","NANDO:2200100","NCIT:C5398","MEDGEN:854517","NANDO:2200099","UMLS:C3887678"],"synonyms":[{"name":"CNS PNET","type":"exact"},{"name":"CNS primitive neuroectodermal neoplasm","type":"exact"},{"name":"CNS primitive neuroectodermal tumor","type":"exact"},{"name":"CNS primitive neuroectodermal tumour","type":"exact"},{"name":"central nervous system PNET","type":"exact"},{"name":"central nervous system neuroectodermal tumor","type":"exact"},{"name":"central nervous system neuroectodermal tumour","type":"exact"},{"name":"central nervous system primitive neuroectodermal neoplasm","type":"exact"},{"name":"central nervous system primitive neuroectodermal tumor","type":"exact"},{"name":"central nervous system primitive neuroectodermal tumor (WHO grade IV)","type":"exact"},{"name":"central nervous system primitive neuroectodermal tumour","type":"exact"},{"name":"central nervous system primitive neuroectodermal tumour (WHO grade IV)","type":"exact"},{"name":"central primitive neuroectodermal neoplasm","type":"exact"},{"name":"central primitive neuroectodermal tumor","type":"exact"},{"name":"central primitive neuroectodermal tumour","type":"exact"},{"name":"primitive neuroectodermal tumor of central nervous system","type":"exact"},{"name":"primitive neuroectodermal tumour of central nervous system","type":"exact"}],"termid":"MONDO:0000640","xrefs":{"Monarch":{"xref_id":"0000640"}}}


id: PBO:0041569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 173","termid":"PBO:0041569"}


id: GO:0070709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of a guanosine nucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nucleotide insertion","termid":"GO:0070705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA guanosine insertion","synonyms":[{"name":"RNA G insertion","type":"exact"}],"termid":"GO:0070709"}


id: MONDO:0003763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anxiety disorder precipitated by an experience of intense fear or horror while exposed to a traumatic (especially life-threatening) event. The disorder is characterized by dissociative symptoms; vivid recollections of the traumatic event; avoidance of stimuli associated with the traumatic event; and a constant state of hyperarousal for no more than one month.","definition_xrefs":["NCIT:C92621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anxiety disorder","termid":"MONDO:0005618"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute stress disorder","secondary_identifiers":["ICD10CM:F43.0","ICD9:308.9","MESH:D000068099","ICD9:308.3","Wikipedia:Acute_stress_reaction","EFO:0005223","SCTID:67195008","UMLS:C0236816","MEDGEN:116022","DOID:6088"],"synonyms":[{"name":"acute stress reaction","type":"exact"},{"name":"traumatic stress disorder","type":"exact"}],"termid":"MONDO:0003763","xrefs":{"Monarch":{"xref_id":"0003763"}}}


id: MONDO:0011402
data:
  {"annotated_genes":["SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86313],"is_not":false,"summary":null,"term":"MONDO:0011402"}]},"cv_name":"mondo","definition":"Congenital Cataracts Facial Dysmorphism Neuropathy (CCFDN) syndrome is a complex developmental disorder of autosomal recessive inheritance.","definition_xrefs":["Orphanet:48431"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic epicanthus (obsolete MONDO:0020165)","termid":"MONDO:0020165"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 16","termid":"MONDO:0016949"},{"relation_name":"is_a","term_name":"autosomal recessive degenerative and progressive cerebellar ataxia","termid":"MONDO:0020046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"congenital cataracts-facial dysmorphism-neuropathy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565822","GARD:16645","ICD9:759.89","MEDGEN:346973","SCTID:702433001","UMLS:C1858726","OMIM:604168"],"synonyms":[{"name":"CCFDN","type":"exact"},{"name":"cataract, congenital, with Facial Dysmorphism and neuropathy","type":"related"},{"name":"congenital cataracts, facial dysmorphism, and neuropathy","type":"related"},{"name":"congenital cataracts-facial dysmorphism-neuropathy syndrome","type":"exact"}],"termid":"MONDO:0011402","terms_by_termid":{"MONDO:0011402":null},"xrefs":{"Monarch":{"xref_id":"0011402"}}}


id: PBO:0043226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLCA4 antisense RNA 1","termid":"PBO:0043226"}


id: MONDO:0011717
data:
  {"annotated_genes":["SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86350],"is_not":false,"summary":null,"term":"MONDO:0011717"}]},"cv_name":"mondo","definition":"Hyperinsulinism-hyperammonemia syndrome (HIHA) is a frequent form of diazoxide-sensitive diffuse hyperinsulinism, characterized by an excessive/ uncontrolled insulin secretion (inappropriate for the level of glycemia), asymptomatic hyperammonemia and recurrent episodes of profound hypoglycemia induced by fasting and protein rich meals, requiring rapid and intensive treatment to prevent neurological sequelae. Epilepsy and cognitive deficit that are unrelated to hypoglycemia may also occur.","definition_xrefs":["Orphanet:35878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"},{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0004736","MONDO:0037792"],"is_obsolete":false,"name":"hyperinsulinism-hyperammonemia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C131832","UMLS:C1847555","MEDGEN:376153","DOID:0070217","MESH:C538375","GARD:9931","OMIM:606762"],"synonyms":[{"name":"GDH hyperinsulinism","type":"exact"},{"name":"GLUD1 hyperinsulinism","type":"exact"},{"name":"HA/hi syndrome","type":"related"},{"name":"HHF6","type":"related"},{"name":"glutamate dehydrogenase 1 hyperinsulinism","type":"exact"},{"name":"hi/HA syndrome","type":"exact"},{"name":"hyperinsulinemic hypoglycemia familial 6","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, 6","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, type 6","type":"exact"},{"name":"hyperinsulinism hyperammonemia syndrome","type":"related"},{"name":"hyperinsulinism-hyperammonemia syndrome","type":"exact"},{"name":"hyperinsulinism/hyperammonemia syndrome","type":"exact"}],"termid":"MONDO:0011717","terms_by_termid":{"MONDO:0011717":null},"xrefs":{"Monarch":{"xref_id":"0011717"}}}


id: PBO:0072088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 18","termid":"PBO:0072088"}


id: PBO:0034237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_taxon","termid":"PBO:0034237"}


id: MONDO:0012064
data:
  {"annotated_genes":["SJAG_04222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85144],"is_not":false,"summary":null,"term":"MONDO:0012064"}]},"cv_name":"mondo","definition":"Choanal atresia - deafness - cardiac defects - dysmorphism syndrome, also known as Burn-McKeown syndrome, is an extremely rare multiple congenital anomaly syndrome characterized by bilateral choanal atresia associated with a characteristic cranio-facial dysmorphism (hypertelorism with narrow palpebral fissures, coloboma of inferior eyelid with presence of eyelashes medial to the defect, prominent nasal bridge, thin lips, prominent ears), that can be accompanied by hearing loss, unilateral cleft lip, preauricular tags, cardiac septal defects and anomalies of the kidneys. The features of this syndrome overlaps considerably with those of the CHARGE syndrome.","definition_xrefs":["Orphanet:1200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04222":null},"genotype_count":0,"is_obsolete":false,"name":"choanal atresia-hearing loss-cardiac defects-craniofacial dysmorphism syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1837822","MEDGEN:325265","OMIM:608572","DOID:0080695","GARD:10041","MESH:C563682"],"synonyms":[{"name":"BMKS","type":"related"},{"name":"Burn-McKeown syndrome","type":"exact"},{"name":"bilateral choanal atresia, cardiac defects, deafness, and dysmorphic appearance","type":"related"},{"name":"choanal atresia deafness cardiac defects dysmorphism","type":"related"},{"name":"oculootofacial dysplasia","type":"exact"}],"termid":"MONDO:0012064","terms_by_termid":{"MONDO:0012064":null},"xrefs":{"Monarch":{"xref_id":"0012064"}}}


id: PBO:0042607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 7","termid":"PBO:0042607"}


id: MONDO:0016218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of rare post-infectious neuropathies that usually occur in otherwise healthy patients. GBS is clinically heterogeneous and encompasses acute inflammatory demyelinating polyradiculoneuropathy (AIDP), acute motor axonal neuropathy (AMAN) and acute motor-sensory axonal neuropathy (AMSAN), Miller-Fisher syndrome (MFS) and some other regional variants.","definition_xrefs":["Orphanet:2103"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acute and subacute inflammatory demyelinating polyneuropathy (obsolete MONDO:0016137)","termid":"MONDO:0016137"},{"relation_name":"is_a","term_name":"autoimmune disorder of peripheral nervous system","termid":"MONDO:0000590"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Guillain-Barre syndrome","secondary_identifiers":["EFO:0007292","UMLS:C0018378","NCIT:C116345","ICD10CM:G61.0","MESH:D020275","DOID:12842","SCTID:40956001","MedDRA:10018767","GARD:6554","MEDGEN:5399"],"synonyms":[{"name":"GBS","type":"exact"},{"name":"Guillain Barre syndrome","type":"exact"},{"name":"Guillain Barré syndrome","type":"exact"},{"name":"Guillain-Barre-Strohl syndrome","type":"exact"},{"name":"Guillain-Barré syndrome","type":"exact"},{"name":"Guillain-Barré-Strohl syndrome","type":"exact"},{"name":"Landry's ascending paralysis","type":"related"},{"name":"Landry-Guillain-Barre-Strohl syndrome","type":"related"},{"name":"acute autoimmune peripheral neuropathy","type":"related"},{"name":"acute immune-mediated polyneuropathy","type":"related"},{"name":"acute inflammatory demyelinating polyneuropathy","type":"related"},{"name":"acute inflammatory neuropathy","type":"related"},{"name":"acute postinfectious polyneuropathy","type":"exact"},{"name":"post-infectious polyneuritis","type":"narrow"},{"name":"post-infective polyneuritis","type":"narrow"},{"name":"postinfectious polyneuritis","type":"narrow"}],"termid":"MONDO:0016218","xrefs":{"Monarch":{"xref_id":"0016218"}}}


id: GO:0102534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: apigenin 4',7-dimethyl ether + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + ladanein + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:73435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"apigenin-7,4'-dimethyl ether 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14751"],"termid":"GO:0102534"}


id: PBO:0068060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 365","termid":"PBO:0068060"}


id: MONDO:1010326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal degeneration that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal degeneration, non-human animal","secondary_identifiers":["OMIA:000866"],"termid":"MONDO:1010326","xrefs":{"Monarch":{"xref_id":"1010326"}}}


id: PR:O74955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translin-associated protein X that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10741:SF1","PRO:DNx","OMA:SCHPO04270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin-associated protein X homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.09c","secondary_identifiers":["UniProtKB:O74955"],"synonyms":[{"name":"Spom972h-TSNAX","type":"exact"}],"termid":"PR:O74955"}


id: PBO:0042910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 7","termid":"PBO:0042910"}


id: FYPO:0001550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell differs from normal during a cellular response to zinc ions. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"altered protein level during cellular response to zinc ion","synonyms":[{"name":"abnormal protein level during cellular response to zinc ion","type":"exact"},{"name":"altered cellular protein level during cellular response to zinc ion during vegetative growth","type":"exact"},{"name":"altered protein level during cellular response to zinc","type":"exact"},{"name":"altered protein level during cellular response to zinc ion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001550"}


id: MONDO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A atherosclerosis that involves the renal artery.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic atherosclerosis","termid":"MONDO:0000980"},{"relation_name":"is_a","term_name":"renal artery disease","termid":"MONDO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal artery atheroma","secondary_identifiers":["DOID:14092","ICD10CM:I70.1","SCTID:45281005","UMLS:C0155734","MEDGEN:510062","ICD9:440.1"],"synonyms":[{"name":"atherosclerosis of renal artery","type":"exact"},{"name":"renal artery atherosclerosis","type":"exact"},{"name":"renal atherosclerosis","type":"exact"}],"termid":"MONDO:0001876","xrefs":{"Monarch":{"xref_id":"0001876"}}}


id: PBO:0042335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD63 antisense RNA 1","termid":"PBO:0042335"}


id: FYPO:0003860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of miconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to miconazole","synonyms":[{"name":"resistance to miconazole during mitotic cell cycle","type":"related"},{"name":"resistance to miconazole during vegetative growth","type":"exact"},{"name":"resistant to miconazole","type":"exact"}],"termid":"FYPO:0003860"}


id: MONDO:0957461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary tuberculous lymphadenitis","secondary_identifiers":["icd11.foundation:870345553","UMLS:C5816704","Orphanet:645807","MEDGEN:1843412"],"termid":"MONDO:0957461","xrefs":{"Monarch":{"xref_id":"0957461"}}}


id: GO:0043208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid binding","termid":"GO:0046625"},{"relation_name":"is_a","term_name":"glycolipid binding","termid":"GO:0051861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"glycosphingolipid binding","termid":"GO:0043208"}


id: MONDO:0010551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked Charcot-Marie-Tooth disease type 3 is a rare, genetic, peripheral sensorimotor neuropathy characterized by an X-linked recessive inheritance pattern and the childhood- to adolescent-onset of progressive, distal muscle weakness and atrophy (beginning in the lower extremities and then affecting the upper extremities), as well as distal, pansensory loss in the upper and lower extremities, pes cavus, and absent or reduced distal tendon reflexes. Pain and paresthesia are frequently the initial sensory symptoms. Spastic paraparesis (manifested by clasp-knife sign, hyperactive deep-tendon reflexes, and Babinski sign) has also been reported.","definition_xrefs":["Orphanet:101077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type X","termid":"MONDO:0018994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease X-linked recessive 3","secondary_identifiers":["SCTID:763458005","MESH:C535303","OMIM:302802","DOID:0110211","UMLS:C1844865","GARD:1244","MEDGEN:375530"],"synonyms":[{"name":"CMT3X","type":"exact"},{"name":"CMTX 3","type":"exact"},{"name":"CMTX3","type":"exact"},{"name":"Charcot Marie Tooth disease X-linked recessive 3","type":"exact"},{"name":"Charcot-Marie-Tooth disease X-linked recessive type 3","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked recessive, 3","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy X-linked recessive 3","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, X-linked recessive, 3","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, X-linked recessive, 3, X-linked recessive","type":"exact"},{"name":"X-linked Charcot-Marie-Tooth disease type 3","type":"exact"}],"termid":"MONDO:0010551","xrefs":{"Monarch":{"xref_id":"0010551"}}}


id: MONDO:0007521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete egasyn (obsolete MONDO:0007521)","secondary_identifiers":["OMIM:129905"],"synonyms":[{"name":"egasyn","type":"exact"},{"name":"esterase 22","type":"related"}],"termid":"MONDO:0007521","xrefs":{"Monarch":{"xref_id":"0007521"}}}


id: PBO:0065158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 8","termid":"PBO:0065158"}


id: GO:1904632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucoside stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:16842873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to glucoside","termid":"GO:1904631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucoside","synonyms":[{"name":"cellular response to glucosides","type":"exact"}],"termid":"GO:1904632"}


id: MONDO:0032693
data:
  {"annotated_genes":["SJAG_01374","SJAG_03986"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85609,85610],"is_not":false,"summary":null,"term":"MONDO:0032693"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01374":null,"SJAG_03986":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16345","MEDGEN:1675829","OMIM:618349","UMLS:C5193045"],"synonyms":[{"name":"GALLOWAY-MOWAT SYNDROME 8","type":"related"},{"name":"GAMOS8","type":"related"}],"termid":"MONDO:0032693","terms_by_termid":{"MONDO:0032693":null},"xrefs":{"Monarch":{"xref_id":"0032693"}}}


id: GO:0052900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O2 + spermine = 1,3-diaminopropane + H2O2 + N-(3-aminopropyl)-4-aminobutanal. Weak activity on N(1)-acetylspermine and spermine.","definition_xrefs":["RHEA:25824","EC:1.5.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"spermine oxidase (propane-1,3-diamine-forming) activity","secondary_identifiers":["MetaCyc:RXN-6421"],"synonyms":[{"name":"polyamine oxidase (propane-1,3-diamine-forming) activity","type":"broad"}],"termid":"GO:0052900"}


id: GO:1990787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the activity of a transcription factor that activates transcription of Hedgehog-target genes in response to Smoothened signaling. In Drosophila, Cubitus interruptus (Ci) is the only identified transcription factor so far in the Hedgehog signaling pathway. In vertebrates members of the Gli protein family are activated by Hedgehog signaling.","definition_xrefs":["GOC:bhm","PMID:24311597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smoothened signaling pathway","termid":"GO:0045879"},{"relation_name":"is_a","term_name":"regulation of DNA-binding transcription factor activity","termid":"GO:0051090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0023052","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"negative regulation of hh target transcription factor activity","synonyms":[{"name":"negative regulation of hedgehog target transcription factor","type":"exact"}],"termid":"GO:1990787"}


id: MOD:01418
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to a methylated threonine, such as O-methyl-L-threonine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated threonine","synonyms":[{"name":"MeThr","type":"exact"}],"termid":"MOD:01418"}


id: MONDO:0020538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant dysgerminomatous germ cell tumor of ovary is the most common form of malignant germ cell tumor of ovary, arising from germ cells in the ovary, usually presenting during adolescence with pelvic mass, fever, vaginal bleeding, and acute abdomen and is characterized by bilaterality (around 10% of cases), association with dysgenetic gonads (5 to 10% of cases), elevated serum lactate dehydrogenase (LDH) and human chorionic gonadotrophin (hCG) (in the presence of syncitiotrophoblasts). Malignant dysgerminomatous germ cell tumor of ovary responds well to chemotherapy, potentially sparing patients from infertility and early mortality.","definition_xrefs":["Orphanet:99912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of ovary","termid":"MONDO:0018171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant dysgerminomatous germ cell tumor of ovary","secondary_identifiers":["GARD:19705"],"synonyms":[{"name":"dysgerminomatous germ cell cancer of ovary","type":"exact"},{"name":"dysgerminomatous germ cell cancer of the ovary","type":"exact"},{"name":"malignant dysgerminomatous germ cell tumor of the ovary","type":"related"},{"name":"malignant dysgerminomatous germ cell tumour of the ovary","type":"related"},{"name":"malignant ovarian dysgerminoma","type":"exact"}],"termid":"MONDO:0020538","xrefs":{"Monarch":{"xref_id":"0020538"}}}


id: MONDO:0957531
data:
  {"annotated_genes":["SJAG_03267"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85884],"is_not":false,"summary":null,"term":"MONDO:0957531"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03267":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly and movement abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1841260","UMLS:C5830624","OMIM:620445"],"termid":"MONDO:0957531","terms_by_termid":{"MONDO:0957531":null},"xrefs":{"Monarch":{"xref_id":"0957531"}}}


id: FYPO:0000822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of P-factor, the mating pheromone produced by mating type plus cells, released into the growth medium is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased concentration of pheromone in growth medium","termid":"FYPO:0000820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"decreased concentration of P-factor in growth medium","synonyms":[{"name":"decreased accumulation of P-factor in growth medium","type":"related"},{"name":"decreased level of P-factor in growth medium","type":"exact"},{"name":"decreased release of P-factor into growth medium","type":"related"},{"name":"reduced concentration of P-factor in growth medium","type":"exact"}],"termid":"FYPO:0000822"}


id: GO:0050197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + phytanate = AMP + diphosphate + H+ + phytanoyl-CoA.","definition_xrefs":["RHEA:21380","EC:6.2.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phytanate-CoA ligase activity","secondary_identifiers":["MetaCyc:PHYTANATE--COA-LIGASE-RXN","Reactome:R-HSA-389622","KEGG_REACTION:R03631"],"synonyms":[{"name":"phytanate:CoA ligase (AMP-forming)","type":"related"},{"name":"phytanoyl-CoA ligase activity","type":"related"}],"termid":"GO:0050197"}


id: PBO:0017532
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Release Factor","termid":"PBO:0017532"}


id: PBO:0054841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2255","termid":"PBO:0054841"}


id: PBO:0047324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAU pseudogene 2","termid":"PBO:0047324"}


id: GO:1902500
data:
  {"annotated_genes":["SJAG_00380","SJAG_01772","SJAG_05184","SJAG_03005","SJAG_04966","SJAG_01598","SJAG_00204","SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89228,89689,93821,99741,99801,100607,104113,117863],"is_not":false,"summary":null,"term":"GO:1902500"}]},"cv_name":"cellular_component","definition":"Any HOPS complex that is part of a vacuolar membrane.","definition_xrefs":["GOC:TermGenie","PMID:23645161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"HOPS complex","termid":"GO:0030897"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_00380":null,"SJAG_01598":null,"SJAG_01772":null,"SJAG_03005":null,"SJAG_04966":null,"SJAG_05184":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005773"],"is_obsolete":false,"name":"vacuolar HOPS complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar membrane HOPS complex","type":"exact"}],"termid":"GO:1902500","terms_by_termid":{"GO:1902500":null}}


id: PBO:0014576
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens CLNS1A","termid":"PBO:0014576"}


id: MONDO:0007157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digitotalar dysmorphism","termid":"MONDO:0015240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, type 1A","secondary_identifiers":["MEDGEN:113099","OMIM:108120","DOID:0111597","UMLS:C0220662","SCTID:715314008"],"synonyms":[{"name":"AMC","type":"exact"},{"name":"DA1A","type":"exact"},{"name":"arthrogryposis multiplex congenita","type":"broad"},{"name":"arthrogryposis multiplex congenita, distal, type 1","type":"related"},{"name":"arthrogryposis, distal, type 1","type":"related"},{"name":"arthrogryposis, distal, type 1A","type":"exact"},{"name":"arthrogryposis, distal, type 2B4","type":"related"}],"termid":"MONDO:0007157","xrefs":{"Monarch":{"xref_id":"0007157"}}}


id: GO:0021535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that will reside in the hindbrain.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration in hindbrain","termid":"GO:0021535"}


id: SO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is localized outside of a lipid bilayer.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"},{"relation_name":"part_of","term_name":"membrane_structure","termid":"SO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"extramembrane_polypeptide_region","secondary_identifiers":["BS:00154"],"synonyms":[{"name":"extramembrane","type":"related"},{"name":"extramembrane polypeptide region","type":"exact"},{"name":"extramembrane_region","type":"related"},{"name":"topo_dom","type":"related"}],"termid":"SO:0001072"}


id: GO:0046401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the core region of bacterial lipopolysaccharides, which contains ten saccharide residues. The structure of this core oligosaccharide appears to be similar in closely related bacterial strains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"part_of","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006629"],"is_obsolete":false,"name":"lipopolysaccharide core region metabolic process","synonyms":[{"name":"LPS core region metabolic process","type":"exact"},{"name":"lipopolysaccharide core region metabolism","type":"exact"}],"termid":"GO:0046401"}


id: PBO:0028364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell","termid":"PBO:0028364"}


id: PBO:0043679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 6","termid":"PBO:0043679"}


id: MONDO:1011039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any oculocutaneous albinism that occurs in dogs due to a mutation in the SLC45A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, SLC45A2-related, dog","secondary_identifiers":["OMIA:001821-9615"],"synonyms":[{"name":"coat color albinism, oculocutaneous type IV, dog","type":"related"}],"termid":"MONDO:1011039","xrefs":{"Monarch":{"xref_id":"1011039"}}}


id: PBO:0038574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRA C-terminal like","termid":"PBO:0038574"}


id: PBO:0062563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AC member 1 (gene/pseudogene)","termid":"PBO:0062563"}


id: PBO:0048976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPAT4 and GINS4 antisense RNA 1","termid":"PBO:0048976"}


id: PATO:0001821
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having no opening.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imperforate","termid":"PATO:0001821"}


id: GO:0019486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-alanine into other compounds, including mevalonate semialdehyde, by transamination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-alanine catabolic process","termid":"GO:0019484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"beta-alanine catabolic process to mevalonate semialdehyde, by transamination","secondary_identifiers":["MetaCyc:BETA-ALA-DEGRADATION-I-PWY"],"synonyms":[{"name":"beta-alanine breakdown to mevalonate semialdehyde, by transamination","type":"exact"},{"name":"beta-alanine degradation to mevalonate semialdehyde, by transamination","type":"exact"}],"termid":"GO:0019486"}


id: FYPO:0004125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-K4 dimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 dimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me2 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 dimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 dimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004125"}


id: GO:0062131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gluconapin + a reduced electron acceptor + O2 = xi-progoitrin + an oxidized electron acceptor + H2O.","definition_xrefs":["PMID:18945935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-butenylglucosinolate 2-hydroxylase activity","secondary_identifiers":["RHEA:60628","MetaCyc:RXNQT-4343"],"synonyms":[{"name":"But-3-enyl Glucosinolate-2-hydroxylase activity","type":"exact"}],"termid":"GO:0062131"}


id: GO:1990214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of protein levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16840699","PMID:22233353"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host protein levels (obsolete GO:1990214)","termid":"GO:1990214"}


id: PBO:0029837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-single_microtubule_bundle","termid":"PBO:0029837"}


id: FYPO:0008210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more promoter regions does not occur.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished chromatin binding","termid":"FYPO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"abolished chromatin binding at promoter region","termid":"FYPO:0008210"}


id: GO:0072702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methyl methanesulfonate (MMS) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methyl methanesulfonate","synonyms":[{"name":"response to MMS","type":"exact"}],"termid":"GO:0072702"}


id: PBO:0047161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 187 member A","termid":"PBO:0047161"}


id: GO:0097255
data:
  {"annotated_genes":["SJAG_04355","SJAG_03036"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101177,111684],"is_not":false,"summary":null,"term":"GO:0097255"}]},"cv_name":"cellular_component","definition":"A highly conserved protein complex comprised of two ATP-dependent DNA helicases (Rvb1p and Rvb2p in yeast, Pontin52 and Reptin52 in humans), Pih1p in yeast or PIH1D1 in humans, and Tah1 in yeast or RPAP3 in humans. The complex associates with Hsp90 and is thought to have a role in assembly of large protein or protein/nucleic acid complexes. In this role it is involved in multiple processes such as box C/D snoRNP biogenesis, phosphatidylinositol-3 kinase-related protein kinase (PIKK) signaling, RNA polymerase II assembly, and others.","definition_xrefs":["PMID:21925213","GOC:mcc","PMID:15766533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03036":null,"SJAG_04355":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"R2TP complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097255","terms_by_termid":{"GO:0097255":null}}


id: GO:0051702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An interaction between two organisms living together in more or less intimate association. The term symbiont is used for the smaller (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological process involved in interaction with symbiont","synonyms":[{"name":"interaction with symbiont","type":"related"}],"termid":"GO:0051702"}


id: PBO:0070848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 27","termid":"PBO:0070848"}


id: PBO:0055671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase A, lysosomal acid type","termid":"PBO:0055671"}


id: PBO:0069367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 627, pseudogene","termid":"PBO:0069367"}


id: PBO:0040528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-2-microglobulin","termid":"PBO:0040528"}


id: GO:0004248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage where P1', P2' and P3' are hydrophobic residues.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete stromelysin 1 activity (obsolete GO:0004248)","synonyms":[{"name":"MMP-3","type":"exact"},{"name":"collagen-activating protein","type":"related"},{"name":"collagenase activating protein","type":"related"},{"name":"matrix metalloproteinase 3 activity","type":"related"},{"name":"neutral proteoglycanase activity","type":"related"},{"name":"procollagenase activator","type":"related"},{"name":"proteoglycanase activity","type":"related"},{"name":"stromelysin","type":"related"},{"name":"stromelysin 1 activity","type":"exact"},{"name":"transin activity","type":"related"}],"termid":"GO:0004248"}


id: PBO:0028428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_pyridoxine","termid":"PBO:0028428"}


id: MOD:00822
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-leucine residue and an L-cysteine residue by a thioester bond to form S-(L-leucyl)-L-cysteine.","definition_xrefs":["PubMed:12591958","RESID:AA0412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-leucine residue","termid":"MOD:02050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-leucyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-4-methylpentanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Leucyl cysteine thioester (Cys-Leu)","type":"exact"},{"name":"S-(2-amino-4-methylpentanoyl)cysteine","type":"exact"},{"name":"S-(L-leucyl)-L-cysteine","type":"exact"},{"name":"XLNK1LeuSCys","type":"exact"},{"name":"leucine cysteine thioester","type":"exact"}],"termid":"MOD:00822"}


id: MOD:00071
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N,N,N-trimethyl-L-alanine.","definition_xrefs":["PubMed:6778808","PubMed:12590383","PubMed:3979397","PubMed:7715456","PubMed:332162","RESID:AA0062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated alanine","termid":"MOD:01461"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-alanine","synonyms":[{"name":"(1S)-1-carboxy-N,N,N-trimethylethanaminium","type":"exact"},{"name":"(1S)-1-carboxy-N,N,N-trimethylethanazanium","type":"exact"},{"name":"(2S)-2-(trimethylammonio)propanoic acid","type":"exact"},{"name":"MOD_RES N,N,N-trimethylalanine","type":"exact"},{"name":"N,N,N-trimethyl-L-alanine","type":"exact"},{"name":"N,N,N-trimethylalanine cation","type":"exact"},{"name":"N,N,N-trimethylalaninium","type":"exact"},{"name":"N,N,N-trimethylated L-alanine","type":"exact"},{"name":"N2Me3+Ala","type":"exact"},{"name":"NMe3Ala","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:00071"}


id: MONDO:0800427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dengue hemorrhagic fever, susceptibility to","secondary_identifiers":["UMLS:C3280584","MEDGEN:482214"],"termid":"MONDO:0800427","xrefs":{"Monarch":{"xref_id":"0800427"}}}


id: GO:0055054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose + H+ = fructose + H+.","definition_xrefs":["GOC:ct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"fructose:proton symporter activity","synonyms":[{"name":"fructose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0055054"}


id: GO:0046141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of corrin, C19H22N4, the fundamental heterocyclic skeleton of the corrinoids. It consists of four reduced pyrrole rings joined into a macrocyclic ring. Corrin is the core of the vitamin B12 molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corrin metabolic process","termid":"GO:0015009"},{"relation_name":"is_a","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"corrin catabolic process","synonyms":[{"name":"corrin breakdown","type":"exact"},{"name":"corrin catabolism","type":"exact"},{"name":"corrin degradation","type":"exact"}],"termid":"GO:0046141"}


id: PBO:0048314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 25","termid":"PBO:0048314"}


id: PBO:0042501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 20","termid":"PBO:0042501"}


id: MONDO:0017330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignancy diagnosed during pregnancy","secondary_identifiers":["MEDGEN:1830090","Orphanet:289385","GARD:21138","UMLS:C5679948"],"synonyms":[{"name":"cancer diagnosed during pregnancy","type":"exact"}],"termid":"MONDO:0017330","xrefs":{"Monarch":{"xref_id":"0017330"}}}


id: PBO:0080127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 5","termid":"PBO:0080127"}


id: PR:Q10411
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.06c","synonyms":[{"name":"Spom972h-spo15","type":"exact"}],"termid":"PR:Q10411"}


id: PBO:0060552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma associated transcript 1","termid":"PBO:0060552"}


id: MONDO:0044217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete asparagus, specific smell hypersensitivity (obsolete MONDO:0044217)","secondary_identifiers":["OMIM:108390"],"synonyms":[{"name":"asparagus, specific smell hypersensitivity","type":"related"}],"termid":"MONDO:0044217","xrefs":{"Monarch":{"xref_id":"0044217"}}}


id: PBO:0080416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 subunit of GARP complex","termid":"PBO:0080416"}


id: MONDO:0003828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, hormonally functioning or non-functioning pituitary gland adenocarcinoma that produces growth hormone. It may be associated with acromegaly.","definition_xrefs":["NCIT:C5963"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"functioning pituitary gland neoplasm","termid":"MONDO:0003604"},{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"pituitary cancer","termid":"MONDO:0002109"},{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"},{"relation_name":"is_a","term_name":"growth hormone-producing pituitary gland neoplasm","termid":"MONDO:0019927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"growth hormone-producing pituitary gland carcinoma","secondary_identifiers":["MEDGEN:277331","UMLS:C1334587","DOID:6256"],"synonyms":[{"name":"Growth hormone producing pituitary gland carcinoma","type":"exact"},{"name":"Growth hormone-producing pituitary gland carcinoma","type":"exact"},{"name":"malignant Growth hormone producing neoplasm of pituitary","type":"exact"},{"name":"malignant Growth hormone producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing neoplasm of the pituitary","type":"exact"},{"name":"malignant Growth hormone producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing pituitary gland neoplasm","type":"exact"},{"name":"malignant Growth hormone producing pituitary gland tumor","type":"exact"},{"name":"malignant Growth hormone producing pituitary gland tumour","type":"exact"},{"name":"malignant Growth hormone producing pituitary neoplasm","type":"exact"},{"name":"malignant Growth hormone producing pituitary tumor","type":"exact"},{"name":"malignant Growth hormone producing pituitary tumour","type":"exact"},{"name":"malignant Growth hormone producing tumor","type":"exact"},{"name":"malignant Growth hormone producing tumor of pituitary","type":"exact"},{"name":"malignant Growth hormone producing tumor of pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing tumor of the pituitary","type":"exact"},{"name":"malignant Growth hormone producing tumor of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing tumour","type":"exact"},{"name":"malignant Growth hormone producing tumour of pituitary","type":"exact"},{"name":"malignant Growth hormone producing tumour of pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing tumour of the pituitary","type":"exact"},{"name":"malignant Growth hormone producing tumour of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting neoplasm of pituitary","type":"exact"},{"name":"malignant Growth hormone secreting neoplasm of pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting neoplasm of the pituitary","type":"exact"},{"name":"malignant Growth hormone secreting neoplasm of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant Growth hormone secreting pituitary gland tumor","type":"exact"},{"name":"malignant Growth hormone secreting pituitary gland tumour","type":"exact"},{"name":"malignant Growth hormone secreting pituitary neoplasm","type":"exact"},{"name":"malignant Growth hormone secreting pituitary tumor","type":"exact"},{"name":"malignant Growth hormone secreting pituitary tumour","type":"exact"},{"name":"malignant Growth hormone secreting tumor of pituitary","type":"exact"},{"name":"malignant Growth hormone secreting tumor of pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting tumor of the pituitary","type":"exact"},{"name":"malignant Growth hormone secreting tumor of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting tumour of pituitary","type":"exact"},{"name":"malignant Growth hormone secreting tumour of pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting tumour of the pituitary","type":"exact"},{"name":"malignant Growth hormone secreting tumour of the pituitary gland","type":"exact"},{"name":"malignant Somatotrophinoma of pituitary","type":"exact"},{"name":"malignant Somatotrophinoma of pituitary gland","type":"exact"},{"name":"malignant Somatotrophinoma of the pituitary gland","type":"exact"},{"name":"malignant pituitary Somatotrophinoma","type":"exact"},{"name":"malignant pituitary gland Somatotrophinoma","type":"exact"},{"name":"malignant pituitary gland somatotropinoma","type":"exact"},{"name":"malignant pituitary somatotropinoma","type":"exact"},{"name":"malignant somatotropinoma","type":"exact"},{"name":"malignant somatotropinoma of pituitary","type":"exact"},{"name":"malignant somatotropinoma of pituitary gland","type":"exact"},{"name":"malignant somatotropinoma of the pituitary","type":"exact"},{"name":"malignant somatotropinoma of the pituitary gland","type":"exact"}],"termid":"MONDO:0003828","xrefs":{"Monarch":{"xref_id":"0003828"}}}


id: PBO:0044312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b561 family member A3","termid":"PBO:0044312"}


id: PBO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence error in genomic data","termid":"PBO:0000129"}


id: MONDO:0021553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myelitis","termid":"MONDO:0002565"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transverse myelitis","secondary_identifiers":["DOID:0080743","ICD9:323.9","MEDGEN:6488","SCTID:16631009","UMLS:C0026976","icd11.foundation:1328350091","MedDRA:10028527"],"synonyms":[{"name":"Myelitis, Transverse","type":"related"},{"name":"Transverse Myelitis","type":"related"},{"name":"Transverse Myelopathy Syndrome","type":"related"},{"name":"Transverse Myelopathy Syndromes","type":"related"},{"name":"Transverse myelitis","type":"related"},{"name":"Transverse myelopathy syndrome","type":"related"},{"name":"transverse myelitis","type":"exact"},{"name":"transverse myelopathy syndrome","type":"exact"}],"termid":"MONDO:0021553","xrefs":{"Monarch":{"xref_id":"0021553"}}}


id: PBO:0052074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1","termid":"PBO:0052074"}


id: GO:0043022
data:
  {"annotated_genes":["SJAG_04874","SJAG_01650","SJAG_01117","SJAG_02061","SJAG_02746","SJAG_03629","SJAG_01176","SJAG_04560","SJAG_00750","SJAG_01517","SJAG_01438","SJAG_01917","SJAG_01201","SJAG_00231","SJAG_03094","SJAG_00188","SJAG_01840","SJAG_03433","SJAG_01249","SJAG_02189","SJAG_03658","SJAG_01806","SJAG_02026","SJAG_04351","SJAG_02330","SJAG_05000","SJAG_03548","SJAG_03882","SJAG_03232","SJAG_00887","SJAG_05332","SJAG_02812","SJAG_02208","SJAG_01074","SJAG_02856","SJAG_04635","SJAG_02171","SJAG_03012","SJAG_03788"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88316,90820,93318,94624,94625,96737,97808,97809,98951,100784,104566,105641,108626,108627,108797,110066,112109,112297,113444,116088,116772,117083],"is_not":false,"summary":null,"term":"GO:0043022"},{"annotations":[102120,105058,106746,99951,98210,91496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097177"},{"annotations":[113851,89294,115609,94732,106337,87898,104184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043023"},{"annotations":[71222,105084,106485,109004,102889,98950,103018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043024"}]},"cv_name":"molecular_function","definition":"Binding to a ribosome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00231":null,"SJAG_00750":null,"SJAG_00887":null,"SJAG_01074":null,"SJAG_01117":null,"SJAG_01176":null,"SJAG_01201":null,"SJAG_01249":null,"SJAG_01438":null,"SJAG_01517":null,"SJAG_01650":null,"SJAG_01806":null,"SJAG_01840":null,"SJAG_01917":null,"SJAG_02026":null,"SJAG_02061":null,"SJAG_02171":null,"SJAG_02189":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02746":null,"SJAG_02812":null,"SJAG_02856":null,"SJAG_03012":null,"SJAG_03094":null,"SJAG_03232":null,"SJAG_03433":null,"SJAG_03548":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03788":null,"SJAG_03882":null,"SJAG_04351":null,"SJAG_04560":null,"SJAG_04635":null,"SJAG_04874":null,"SJAG_05000":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ribosome binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030376"],"synonyms":[{"name":"ribosome receptor activity","type":"narrow"}],"termid":"GO:0043022","terms_by_termid":{"GO:0043022":null,"GO:0043023":null,"GO:0043024":null,"GO:0097177":null}}


id: PBO:0027331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rRNA_transcription","termid":"PBO:0027331"}


id: GO:2000655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to testosterone stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to testosterone stimulus","termid":"GO:2000654"},{"relation_name":"negatively_regulates","term_name":"cellular response to testosterone stimulus","termid":"GO:0071394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to testosterone stimulus","termid":"GO:2000655"}


id: GO:0140861
data:
  {"annotated_genes":["SJAG_04190","SJAG_04272","SJAG_02500","SJAG_04097","SJAG_00045","SJAG_02303","SJAG_03792","SJAG_01016","SJAG_04989","SJAG_03579","SJAG_04793","SJAG_05282","SJAG_02698","SJAG_02701","SJAG_02439","SJAG_01385","SJAG_00187","SJAG_02990","SJAG_04039","SJAG_02198","SJAG_03145","SJAG_00783","SJAG_01611","SJAG_03230","SJAG_00349","SJAG_03628"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88388,89559,90208,91882,92298,93515,93812,94112,94329,94571,96728,98405,98465,98643,98890,99174,103520,103706,104197,106342,107195,108525,112592,114161,115041,117999],"is_not":false,"summary":null,"term":"GO:0140861"}]},"cv_name":"biological_process","definition":"A chromatin remodeling process that allows DNA repair enzyme to access genomic DNA and repair DNA lesions.","definition_xrefs":["PMID:29095668","PMID:28053344","PMID:15528408","PMID:35689883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"part_of","term_name":"DNA damage response","termid":"GO:0006974"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00187":null,"SJAG_00349":null,"SJAG_00783":null,"SJAG_01016":null,"SJAG_01385":null,"SJAG_01611":null,"SJAG_02198":null,"SJAG_02303":null,"SJAG_02439":null,"SJAG_02500":null,"SJAG_02698":null,"SJAG_02701":null,"SJAG_02990":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03628":null,"SJAG_03792":null,"SJAG_04039":null,"SJAG_04097":null,"SJAG_04190":null,"SJAG_04272":null,"SJAG_04793":null,"SJAG_04989":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"DNA repair-dependent chromatin remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage-dependent chromatin remodelling","type":"exact"}],"termid":"GO:0140861","terms_by_termid":{"GO:0140861":null}}


id: PBO:0091988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf24 (frameshifted)","termid":"PBO:0091988"}


id: PBO:0069589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 863, pseudogene","termid":"PBO:0069589"}


id: GO:0140195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of an adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process (obsolete GO:0140195)","termid":"GO:0140195"}


id: GO:0018001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal tyrosine of proteins to form the derivative N-acetyl-L-valine.","definition_xrefs":["RESID:AA0054"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-valine acetylation (obsolete GO:0018001)","termid":"GO:0018001"}


id: PBO:0053678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 863","termid":"PBO:0053678"}


id: MOD:01167
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod","definition_xrefs":["Unimod:424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum pterin containing modification","termid":"MOD:00744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdopterin guanine dinucleotide","synonyms":[{"name":"MolybdopterinGD","type":"related"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"}],"termid":"MOD:01167"}


id: MONDO:0002793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete medullomyoblastoma (obsolete MONDO:0002793)","termid":"MONDO:0002793","xrefs":{"Monarch":{"xref_id":"0002793"}}}


id: GO:0044520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of vasoactive intestinal polypeptide receptor activity in another organism","termid":"GO:0044519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044520"}


id: MONDO:0000389
data:
  {"annotated_genes":["SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86268,86269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009727"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"atelosteogenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:108720","SCTID:43814000","DOID:0050648","MEDGEN:1806597","UMLS:C5574658"],"termid":"MONDO:0000389","terms_by_termid":{"MONDO:0009727":null},"xrefs":{"Monarch":{"xref_id":"0000389"}}}


id: PBO:0031129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-genome_stability_defects_(obsolete_FYPO:0000241)","termid":"PBO:0031129"}


id: PBO:0005512
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.6","termid":"PBO:0005512"}


id: PR:O74793
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC26H8.11c gene.","definition_xrefs":["UniProtKB:O74793","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26H8.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.11c","synonyms":[{"name":"Spom972h-SPBC26H8.11c","type":"exact"}],"termid":"PR:O74793"}


id: PBO:0065442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC2 pseudogene 1","termid":"PBO:0065442"}


id: PBO:0018075
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae DCP1","termid":"PBO:0018075"}


id: PBO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transporter (predicted)","termid":"PBO:0000139"}


id: GO:0006733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving coenzymes that are required, in addition to an enzyme and a substrate, for an oxidoreductase reaction to proceed.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreduction coenzyme metabolic process (obsolete GO:0006733)","synonyms":[{"name":"oxidoreduction coenzyme metabolism","type":"exact"}],"termid":"GO:0006733"}


id: FYPO:0007486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle forms with microtubules emanating from only one pole during the second meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000120","FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"monopolar spindle during meiosis II","synonyms":[{"name":"V-shaped spindle during meiosis II","type":"related"},{"name":"fan-shaped spindle during meiosis II","type":"exact"},{"name":"monopolar spindle during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007486"}


id: PBO:0114427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDLRAD4 antisense RNA 2","termid":"PBO:0114427"}


id: GO:0140003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 trimethylated at lysine 36.","definition_xrefs":["PMID:16364921","PMID:15489290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0140566","GO:0030674"],"is_obsolete":false,"name":"histone H3K36me3 reader activity","synonyms":[{"name":"H3-K36me3 modified histone binding","type":"narrow"},{"name":"H3K36me3 modified histone binding","type":"narrow"}],"termid":"GO:0140003"}


id: PBO:0078268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 4-1","termid":"PBO:0078268"}


id: PR:O42932
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b-c1 complex subunit 6, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15336:SF0","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.08c","secondary_identifiers":["UniProtKB:O42932"],"synonyms":[{"name":"SPBC16C6.08c","type":"related"},{"name":"Spom972h-UQCRH","type":"exact"},{"name":"complex III subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mitochondrial hinge protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase complex subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42932"}


id: PBO:0077798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOR1B pseudogene 1","termid":"PBO:0077798"}


id: PBO:0071011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 13","termid":"PBO:0071011"}


id: GO:1904199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of regulation of vascular smooth muscle cell membrane depolarization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20826763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of membrane depolarization","termid":"GO:1904181"},{"relation_name":"positively_regulates","term_name":"regulation of vascular associated smooth muscle cell membrane depolarization","termid":"GO:1990736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of regulation of vascular associated smooth muscle cell membrane depolarization","synonyms":[{"name":"activation of regulation of vascular smooth muscle cell membrane depolarization","type":"narrow"},{"name":"positive regulation of regulation of vascular smooth muscle cell membrane depolarization","type":"exact"},{"name":"up regulation of regulation of vascular smooth muscle cell membrane depolarization","type":"exact"},{"name":"up-regulation of regulation of vascular smooth muscle cell membrane depolarization","type":"exact"},{"name":"upregulation of regulation of vascular smooth muscle cell membrane depolarization","type":"exact"}],"termid":"GO:1904199"}


id: PBO:0002985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous Pmf1 factor 1, implicated in isoleucine biosynthesis (predicted)","termid":"PBO:0002985"}


id: FYPO:0008269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of phosphate (Pi) measured in the cell is lower than normal.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphate (Pi) level","termid":"FYPO:0008268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased total cellular phosphate (Pi) level","termid":"FYPO:0008269"}


id: PBO:0080858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 interacting factor homolog A, membrane trafficking protein","termid":"PBO:0080858"}


id: GO:1903254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving hercynylselenocysteine.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:24828577"],"gene_count":0,"genotype_count":0,"name":"obsolete hercynylselenocysteine metabolic process (obsolete GO:1903254)","synonyms":[{"name":"hercynylselenocysteine metabolism","type":"exact"}],"termid":"GO:1903254"}


id: GO:1904755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gut granule assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17535251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"gut granule assembly","termid":"GO:1902900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of gut granule assembly","synonyms":[{"name":"regulation of gut granule biogenesis","type":"exact"},{"name":"regulation of gut granule formation","type":"exact"}],"termid":"GO:1904755"}


id: GO:0043873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin.","definition_xrefs":["PMID:6352705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"pyruvate-flavodoxin oxidoreductase activity","secondary_identifiers":["RHEA:44140","MetaCyc:PYFLAVOXRE-RXN"],"synonyms":[{"name":"NifJ","type":"related"},{"name":"pyruvate:flavodoxin oxidoreductase activity","type":"exact"}],"termid":"GO:0043873"}


id: MONDO:0700144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic malignant (clonal) hematologic disorder, arising from hematopoietic stem cells in dogs. It is characterized by the presence of primitive or atypical myeloid or lymphoid cells in the bone marrow and the blood.","definition_xrefs":["NCIT:C128120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia, non-human animal","termid":"MONDO:0700100"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine leukemia","termid":"MONDO:0700144","xrefs":{"Monarch":{"xref_id":"0700144"}}}


id: GO:1903789
data:
  {"annotated_genes":["SJAG_05346","SJAG_00991","SJAG_02605","SJAG_03970","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[98380,109991,92833,91250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[91251,92834,98381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[92835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amino acid transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:16115814","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"amino acid transmembrane transport","termid":"GO:0003333"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of amino acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of amino acid membrane transport","type":"exact"}],"termid":"GO:1903789","terms_by_termid":{"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:0032812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epinephrine secretion","termid":"GO:0014060"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine secretion","termid":"GO:0033605"},{"relation_name":"positively_regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epinephrine secretion","synonyms":[{"name":"activation of epinephrine secretion","type":"narrow"},{"name":"positive regulation of adrenaline secretion","type":"exact"},{"name":"stimulation of epinephrine secretion","type":"narrow"},{"name":"up regulation of epinephrine secretion","type":"exact"},{"name":"up-regulation of epinephrine secretion","type":"exact"},{"name":"upregulation of epinephrine secretion","type":"exact"}],"termid":"GO:0032812"}


id: MONDO:0012634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial dysplasia - osteopenia syndrome","secondary_identifiers":["Orphanet:314555","GARD:17422","MESH:C566988","MEDGEN:370148","OMIM:611174","UMLS:C1970027"],"synonyms":[{"name":"HAMAMY syndrome","type":"related"},{"name":"HMMS","type":"related"},{"name":"Hamamy syndrome","type":"exact"},{"name":"hypertelorism, Severe, with midface prominence, myopia, intellectual disability, and bone fragility","type":"related"},{"name":"hypertelorism, Severe, with midface prominence, myopia, mental retardation, and bone fragility","type":"related"}],"termid":"MONDO:0012634","xrefs":{"Monarch":{"xref_id":"0012634"}}}


id: MONDO:0008023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This disorder is characterized by muscular atrophy, ataxia, retinitis pigmentosa, and diabetes mellitus.","definition_xrefs":["Orphanet:2579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"muscular atrophy-ataxia-retinitis pigmentosa-diabetes mellitus syndrome","secondary_identifiers":["ICD9:728.2","MEDGEN:137966","SCTID:237611007","GARD:2417","OMIM:158500","UMLS:C0342281"],"synonyms":[{"name":"Furukawa-Takagi-Nakao syndrome","type":"exact"},{"name":"muscular atrophy ataxia retinitis pigmentosa and diabetes mellitus","type":"related"},{"name":"muscular atrophy, ataxia, retinitis pigmentosa, and diabetes mellitus","type":"related"}],"termid":"MONDO:0008023","xrefs":{"Monarch":{"xref_id":"0008023"}}}


id: GO:1903655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 2 residues that is involved in positive regulation of transcription elongation from RNA polymerase II promoter.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:19328067"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 2 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter (obsolete GO:1903655)","termid":"GO:1903655"}


id: PBO:0074664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 50D","termid":"PBO:0074664"}


id: GO:0075081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont transmembrane receptor-mediated signal transduction (obsolete GO:0075081)","termid":"GO:0075081"}


id: PBO:0004486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16 small nucleolar RNA","termid":"PBO:0004486"}


id: FYECO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed on normal medium after a short incubation in medium containing hydroxyurea.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient hydroxyurea treatment","secondary_identifiers":["PMID:37200372"],"synonyms":[{"name":"acute hydroxyurea treatment","type":"broad"}],"termid":"FYECO:0000434"}


id: GO:0021709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar basket cell. Differentiation includes the processes involved in commitment of a neuroblast to a cerebellar basket cell fate. A cerebellar basket cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar molecular layer formation","termid":"GO:0021688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar basket cell differentiation","termid":"GO:0021709"}


id: GO:1905341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to kinetochore.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22581055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to kinetochore","termid":"GO:1905340"},{"relation_name":"negatively_regulates","term_name":"protein localization to kinetochore","termid":"GO:0034501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to kinetochore","synonyms":[{"name":"down regulation of condensin localization to kinetochore","type":"narrow"},{"name":"down regulation of protein localisation to kinetochore","type":"exact"},{"name":"down regulation of protein localization to kinetochore","type":"exact"},{"name":"down-regulation of condensin localization to kinetochore","type":"narrow"},{"name":"down-regulation of protein localisation to kinetochore","type":"exact"},{"name":"down-regulation of protein localization to kinetochore","type":"exact"},{"name":"downregulation of condensin localization to kinetochore","type":"narrow"},{"name":"downregulation of protein localisation to kinetochore","type":"exact"},{"name":"downregulation of protein localization to kinetochore","type":"exact"},{"name":"inhibition of condensin localization to kinetochore","type":"narrow"},{"name":"inhibition of protein localisation to kinetochore","type":"narrow"},{"name":"inhibition of protein localization to kinetochore","type":"narrow"},{"name":"negative regulation of condensin localization to kinetochore","type":"narrow"},{"name":"negative regulation of protein localisation to kinetochore","type":"exact"}],"termid":"GO:1905341"}


id: MONDO:0016688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most frequent histological variant of diffuse astrocytoma. It is predominantly composed of fibrillary neoplastic astrocytes. Nuclear atypia is a diagnostic criterion but mitotic activity, necrosis and microvascular proliferation are absent. The occasional or regional occurrence of gemistocytic neoplastic cells is compatible with the diagnosis of fibrillary astrocytoma. (WHO)","definition_xrefs":["NCIT:C4322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse astrocytoma","termid":"MONDO:0016686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillary astrocytoma","secondary_identifiers":["GARD:20708","UMLS:C0334582","MEDGEN:87270","ICDO:9420/3","MedDRA:10065889","Orphanet:251601","DOID:6726"],"synonyms":[{"name":"fibrillary astrocytic tumors","type":"exact"},{"name":"fibrillary astrocytic tumours","type":"exact"},{"name":"fibrillary astrocytoma","type":"exact"}],"termid":"MONDO:0016688","xrefs":{"Monarch":{"xref_id":"0016688"}}}


id: GO:0003735
data:
  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id: GO:0106069
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SUMO-E3 ligase complex capable of promoting synapsis, the meiotic cell cycle process where side by side pairing and physical juxtaposition of homologous chromosomes is created during meiotic prophase.","definition_xrefs":["PMID:16847351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"synapsis initiation complex","termid":"GO:0106069"}


id: GO:0031679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADH + H+ + plastoquinone = NAD+ + plastoquinol.","definition_xrefs":["EC:1.6.99.6","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete NADH dehydrogenase (plastoquinone) activity (obsolete GO:0031679)","synonyms":[{"name":"NADH:plastoquinone reductase activity","type":"exact"}],"termid":"GO:0031679"}


id: PBO:0078774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-6","termid":"PBO:0078774"}


id: PBO:0039695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apurinic/apyrimidinic endodeoxyribonuclease 1","termid":"PBO:0039695"}


id: MOD:01956
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to (3R)-3-hydroxy-L-arginine.","definition_xrefs":["PubMed:10094780","PubMed:23103944","PubMed:786730","RESID:AA0601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated arginine","termid":"MOD:00682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(3R)-3-hydroxy-L-arginine","synonyms":[{"name":"(2S,3R)-2-amino-5-[(diaminomethylidene)amino]-3-hydroxypentanoic acid","type":"exact"},{"name":"(3R)-3-hydroxy-L-arginine","type":"exact"},{"name":"2-amino-5-(carbamimidamido)-3-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-[(aminoiminomethyl)amino]-3-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-guanidino-3-hydroxypentanoic acid","type":"exact"},{"name":"C(beta)-hydroxyarginine","type":"exact"},{"name":"MOD_RES (3R)-3-hydroxyarginine","type":"exact"},{"name":"beta-hydroxyarginine","type":"exact"}],"termid":"MOD:01956"}


id: SO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for mitochondrial LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mt_rRNA_gene","termid":"SO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_LSU_rRNA_gene","synonyms":[{"name":"mitochondrial large subunit rRNA gene","type":"exact"},{"name":"rRNA 21S gene","type":"exact"},{"name":"rRNA_21S_gene","type":"exact"}],"termid":"SO:0002364"}


id: GO:0015754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-allose is transported across a lipid bilayer, from one side of a membrane to the other. Allose is an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"D-allose transmembrane transport","synonyms":[{"name":"allose transmembrane transport","type":"narrow"},{"name":"allose transport","type":"related"}],"termid":"GO:0015754"}


id: GO:0009069
data:
  {"annotated_genes":["SJAG_02791","SJAG_02901","SJAG_03152","SJAG_00582","SJAG_01880","SJAG_00283","SJAG_03914","SJAG_03671","SJAG_01271","SJAG_02450","SJAG_03861","SJAG_03641","SJAG_01766","SJAG_03290","SJAG_00395","SJAG_03556","SJAG_04964","SJAG_00234","SJAG_02972","SJAG_02313","SJAG_04305","SJAG_04449","SJAG_02290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[96391,108916,101381,94996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[109958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019343"},{"annotations":[93710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[93991,90811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[97363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[112472,88187,86946,95907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[115227,111418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[110541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009092"},{"annotations":[109959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[100162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[113376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[109597,91726,99756,116353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"},{"annotations":[112147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016259"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00283":null,"SJAG_00395":null,"SJAG_00582":null,"SJAG_01271":null,"SJAG_01766":null,"SJAG_01880":null,"SJAG_02290":null,"SJAG_02313":null,"SJAG_02450":null,"SJAG_02791":null,"SJAG_02901":null,"SJAG_02972":null,"SJAG_03152":null,"SJAG_03290":null,"SJAG_03556":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_04305":null,"SJAG_04449":null,"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"serine family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid metabolism","type":"exact"}],"termid":"GO:0009069","terms_by_termid":{"GO:0006535":null,"GO:0006545":null,"GO:0006546":null,"GO:0006564":null,"GO:0009090":null,"GO:0009092":null,"GO:0016259":null,"GO:0019264":null,"GO:0019279":null,"GO:0019280":null,"GO:0019343":null,"GO:0019344":null,"GO:0019464":null,"GO:0071269":null}}


id: PBO:0084979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; involved in the detoxification of acetaldehyde, glycolaldehyde, furfural, formaldehyde and propionaldehyde; localizes to the endoplasmic reticulum; member of the classical short-chain dehydrogenase/reductase (SDR) family","termid":"PBO:0084979"}


id: MONDO:0003582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant inherited syndrome caused by mutations in the BRCA1 or BRCA2 genes. Patients are at high risk of developing breast cancer, particularly before the age of fifty, high risk of developing a second primary breast cancer, and high risk of developing both breast and ovarian cancer.","definition_xrefs":["NCIT:C8493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare malignant breast tumor (obsolete MONDO:0015870)","termid":"MONDO:0015870"},{"relation_name":"excluded_subClassOf","term_name":"familial ovarian cancer","termid":"MONDO:0016248"},{"relation_name":"excluded_subClassOf","term_name":"hereditary breast carcinoma","termid":"MONDO:0016419"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"hereditary breast ovarian cancer syndrome","secondary_identifiers":["NORD:1936","GARD:15010","MEDGEN:151793","DOID:5683","Orphanet:145","SCTID:718220008","UMLS:C0677776","icd11.foundation:1258896144","ICD10CM:C50","MESH:D061325"],"synonyms":[{"name":"BRCA1- and BRCA2-associated hereditary breast and ovarian cancer","type":"exact"},{"name":"BRCA1- and BRCA2-associated hereditary breast and ovarian cancer (HBOC)","type":"exact"},{"name":"HBOC syndrome","type":"related"},{"name":"HBOC syndromes","type":"related"},{"name":"Hereditary Breast and Ovarian Cancer Syndrome","type":"exact"},{"name":"familial breast and ovarian cancer syndrome","type":"exact"},{"name":"familial breast/ovarian cancer (BRCA1, BRCA2)","type":"exact"},{"name":"hereditary breast and ovarian cancer","type":"exact"},{"name":"hereditary breast and ovarian cancer syndrome","type":"exact"},{"name":"hereditary breast ovarian cancer","type":"related"},{"name":"hereditary breast ovarian cancer syndrome","type":"exact"},{"name":"hereditary breast/ovarian cancer (BRCA1, BRCA2)","type":"exact"},{"name":"syndrome, HBOC","type":"related"},{"name":"syndromes, HBOC","type":"related"}],"termid":"MONDO:0003582","xrefs":{"Monarch":{"xref_id":"0003582"}}}


id: PBO:0046656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase D","termid":"PBO:0046656"}


id: MONDO:0015489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete predominantly medium-vessel vasculitis (obsolete MONDO:0015489)","secondary_identifiers":["Orphanet:156143"],"termid":"MONDO:0015489","xrefs":{"Monarch":{"xref_id":"0015489"}}}


id: PBO:0085388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane H+-pantothenate symporter; confers sensitivity to the antifungal agent fenpropimorph; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0085388"}


id: GO:0002753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand from another organism to a cytoplasmic pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["GOC:ar","PMID:17328678","PMID:19531363","GOC:add","PMID:15199967","PMID:18272355","PMID:21187438","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"},{"relation_name":"is_a","term_name":"intracellular receptor signaling pathway","termid":"GO:0030522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cytoplasmic pattern recognition receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-9645460","GO:0039528"],"synonyms":[{"name":"cytoplasmic PRR signaling pathway","type":"exact"},{"name":"cytoplasmic caspase-recruiting domain (CARD) helicase signaling pathway","type":"narrow"},{"name":"cytoplasmic pathogen receptor signaling pathway","type":"exact"},{"name":"cytoplasmic pattern recognition receptor signalling pathway","type":"exact"},{"name":"cytosolic PAMP receptor signaling pathway","type":"exact"},{"name":"cytosolic pattern recognition receptor signaling pathway","type":"exact"}],"termid":"GO:0002753"}


id: MONDO:0007141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete antiviral state repressor, regulator of (obsolete MONDO:0007141)","secondary_identifiers":["OMIM:107440"],"synonyms":[{"name":"AVRR","type":"related"},{"name":"antiviral STATE repressor, regulator OF","type":"related"},{"name":"antiviral state repressor, regulator of","type":"exact"}],"termid":"MONDO:0007141","xrefs":{"Monarch":{"xref_id":"0007141"}}}


id: PBO:0089996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase, e2 component of oxoglutarate dehydrogenase complex Kdg2","termid":"PBO:0089996"}


id: PBO:0041212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor","termid":"PBO:0041212"}


id: GO:0052415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving glucans within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by organism of glucan in other organism involved in symbiotic interaction (obsolete GO:0052415)","synonyms":[{"name":"metabolism by organism of glucan in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052415"}


id: PBO:0071308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 31","termid":"PBO:0071308"}


id: PBO:0087065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L31B; associates with karyopherin Sxm1p; loss of both Rpl31p and Rpl39p confers lethality; homologous to mammalian ribosomal protein L31, no bacterial homolog; RPL31B has a paralog, RPL31A, that arose from the whole genome duplication","termid":"PBO:0087065"}


id: GO:0050127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoylsarcosine + H2O + 2 H+ = CO2 + NH4 + sarcosine.","definition_xrefs":["EC:3.5.1.59","RHEA:20057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"N-carbamoylsarcosine amidase activity","secondary_identifiers":["MetaCyc:N-CARBAMOYLSARCOSINE-AMIDASE-RXN","KEGG_REACTION:R01563"],"synonyms":[{"name":"CSHase activity","type":"related"},{"name":"N-carbamoylsarcosine amidohydrolase activity","type":"related"},{"name":"carbamoylsarcosine amidase activity","type":"related"}],"termid":"GO:0050127"}


id: GO:0097149
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex playing a key role in the formation of the central spindle in mitosis. Made up of two molecules each of a mitotic kinesin (ZEN-4 in Caenorhabditis elegans or MKLP1 in mammals) and of two molecules each of a GTPase activating protein (GAP) factor (CYK-4 in Caenorhabditis elegans or MgcRacGAP in mammals).","definition_xrefs":["PMID:16236794","GOC:ans","PMID:11782313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"mitotic spindle","termid":"GO:0072686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0072686","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"centralspindlin complex","termid":"GO:0097149"}


id: PBO:0040912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 16","termid":"PBO:0040912"}


id: GO:0003882
data:
  {"annotated_genes":["SJAG_01233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114128],"is_not":false,"summary":null,"term":"GO:0003882"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-diacylglycerol + L-serine = CMP + O-sn-phosphatidyl-L-serine.","definition_xrefs":["EC:2.7.8.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"CDP-diacylglycerol-serine O-phosphatidyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:16913","MetaCyc:PHOSPHASERSYN-RXN"],"synonyms":[{"name":"CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"related"},{"name":"CDP-diglyceride:serine phosphatidyltransferase activity","type":"related"},{"name":"CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"related"},{"name":"PS synthase activity","type":"related"},{"name":"cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"related"},{"name":"cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"related"},{"name":"cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"related"},{"name":"phosphatidylserine synthase activity","type":"related"},{"name":"phosphatidylserine synthetase activity","type":"related"},{"name":"serine exchange enzyme","type":"broad"}],"termid":"GO:0003882","terms_by_termid":{"GO:0003882":null}}


id: PBO:0062018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 9 pseudogene","termid":"PBO:0062018"}


id: PBO:0091650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane inorganic phosphate transmembrane transporter Pho841","termid":"PBO:0091650"}


id: PBO:0042801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 350","termid":"PBO:0042801"}


id: GO:0030220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which platelets bud from long processes extended by megakaryocytes.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell differentiation","termid":"GO:0030099"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"platelet morphogenesis","termid":"GO:0036344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet formation","synonyms":[{"name":"platelet extrusion","type":"exact"}],"termid":"GO:0030220"}


id: PBO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit IV (predicted)","termid":"PBO:0000548"}


id: GO:0102050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-tyrosine + ATP(4-) = H+ + indole-3-acetyl-tyrosine + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-tyrosine synthetase activity (obsolete GO:0102050)","termid":"GO:0102050"}


id: GO:0060294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Movement of cilia mediated by motor proteins that contributes to the movement of a cell.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium movement","termid":"GO:0003341"},{"relation_name":"part_of","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium movement involved in cell motility","termid":"GO:0060294"}


id: PBO:0083207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL197C/UBP12","termid":"PBO:0083207"}


id: PBO:0017465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-go_annotation_extension_relation","termid":"PBO:0017465"}


id: PATO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having two or more entities that extend from a common point in different directions.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent from","termid":"PATO:0002424"}


id: MONDO:0016369
data:
  {"annotated_genes":["SJAG_02200","SJAG_04995"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84592,84593],"is_not":false,"summary":null,"term":"MONDO:0016369"}]},"cv_name":"mondo","definition":"Rothmund-Thomson syndrome type 2 is a subform of Rothmund-Thomson syndrome (RTS) presenting with a characteristic facial rash (poikiloderma) and frequently associated with short stature, sparse scalp hair, sparse or absent eyelashes and/or eyebrows, congenital bone defects and an increased risk of osteosarcoma in childhood and squamous cell carcinoma later in life.","definition_xrefs":["Orphanet:221016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"Rothmund-Thomson syndrome","termid":"MONDO:0010002"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02200":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093","MONDO:0019303"],"is_obsolete":false,"name":"Rothmund-Thomson syndrome type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17135","NCIT:C178827","UMLS:C5203410","OMIM:268400","icd11.foundation:2111040755","MEDGEN:1684753"],"synonyms":[{"name":"RTS2","type":"exact"},{"name":"Rothmund-Thomson syndrome, type 2","type":"exact"},{"name":"poikiloderma of Rothmund-Thomson type 2","type":"exact"}],"termid":"MONDO:0016369","terms_by_termid":{"MONDO:0016369":null},"xrefs":{"Monarch":{"xref_id":"0016369"}}}


id: PBO:0066129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 8","termid":"PBO:0066129"}


id: PBO:0065693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine 5'-phosphatase pseudogene 2","termid":"PBO:0065693"}


id: MONDO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease or trauma involving a single peripheral nerve in isolation, or out of proportion to evidence of diffuse peripheral nerve dysfunction. Mononeuropathy multiplex refers to a condition characterized by multiple isolated nerve injuries. Mononeuropathies may result from a wide variety of causes, including ischemia; traumatic injury; compression; connective tissue diseases; cumulative trauma disorders; and other conditions.","definition_xrefs":["MESH:D020422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"mononeuropathy","secondary_identifiers":["UMLS:C0494491","icd11.foundation:1866592137","MEDGEN:99214","DOID:1188","EFO:0009558","SCTID:128189008"],"termid":"MONDO:0001397","xrefs":{"Monarch":{"xref_id":"0001397"}}}


id: GO:0008191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0098772","GO:0003674","GO:0004857"],"is_obsolete":false,"name":"metalloendopeptidase inhibitor activity","synonyms":[{"name":"metalloprotease inhibitor","type":"narrow"},{"name":"metalloproteinase inhibitor","type":"narrow"}],"termid":"GO:0008191"}


id: GO:0042163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the beta subunit of interleukin-12.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-12 binding","termid":"GO:0019972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-12 beta subunit binding","synonyms":[{"name":"CLMFp40 binding","type":"exact"},{"name":"IL-12B binding","type":"exact"},{"name":"IL-12p40 binding","type":"exact"},{"name":"NKSFp40 binding","type":"exact"}],"termid":"GO:0042163"}


id: PBO:0047395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO34 antisense RNA 1","termid":"PBO:0047395"}


id: MONDO:0000731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peeling skin syndrome (obsolete MONDO:0000731)","termid":"MONDO:0000731","xrefs":{"Monarch":{"xref_id":"0000731"}}}


id: GO:2000115
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of bipolar cell polarity regulating in cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"},{"relation_name":"regulates","term_name":"maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061305"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000115","terms_by_termid":{"GO:0061361":null}}


id: SO:0001289
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Lysidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysidine","secondary_identifiers":["http://en.wikipedia.org/wiki/Lysidine","RNAMOD:028"],"synonyms":[{"name":"k2C","type":"exact"}],"termid":"SO:0001289"}


id: MONDO:0003248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pineal parenchymal cell neoplasm (pineocytoma or pineoblastoma) occurring in adults.","definition_xrefs":["NCIT:C8273"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pineal gland cancer","termid":"MONDO:0003249"},{"relation_name":"is_a","term_name":"pineal parenchymal cell neoplasm","termid":"MONDO:0024890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult pineal parenchymal tumor","secondary_identifiers":["MEDGEN:83710","DOID:5031","UMLS:C0280794"],"synonyms":[{"name":"adult pineal gland neoplasm","type":"exact"},{"name":"adult pineal gland tumor","type":"exact"},{"name":"adult pineal gland tumour","type":"exact"},{"name":"adult pineal parenchymal cell neoplasm","type":"exact"},{"name":"adult pineal parenchymal cell tumor","type":"exact"},{"name":"adult pineal parenchymal cell tumour","type":"exact"},{"name":"adult pineal parenchymal neoplasm","type":"exact"},{"name":"adult pineal parenchymal tumor","type":"exact"},{"name":"parenchymal neoplasm of adult pineal gland","type":"exact"},{"name":"parenchymal neoplasm of the adult pineal gland","type":"exact"},{"name":"parenchymal tumor of adult pineal gland","type":"exact"},{"name":"parenchymal tumor of the adult pineal gland","type":"exact"},{"name":"parenchymal tumour of adult pineal gland","type":"exact"},{"name":"parenchymal tumour of the adult pineal gland","type":"exact"},{"name":"pineal parenchymal cell neoplasm of adults","type":"exact"},{"name":"pineal parenchymal cell tumor","type":"broad"},{"name":"pineal parenchymal cell tumour","type":"broad"}],"termid":"MONDO:0003248","xrefs":{"Monarch":{"xref_id":"0003248"}}}


id: GO:0019546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including ornithine and CO2, using the enzyme arginine deiminase.","definition_xrefs":["MetaCyc:ARGDEGRAD-PWY","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"arginine deiminase pathway","termid":"GO:0019546"}


id: PATO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000913 qualitative value (obsolete PATO:0000913)","termid":"PATO:0000913"}


id: PBO:0081299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 80","termid":"PBO:0081299"}


id: PBO:0027774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_viridicatumtoxin","termid":"PBO:0027774"}


id: PBO:0075831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure specific recognition protein 1","termid":"PBO:0075831"}


id: PBO:0003490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis12","termid":"PBO:0003490"}


id: MONDO:0010734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatial visualization, aptitude for","secondary_identifiers":["MEDGEN:326850","OMIM:313000","MESH:C564058","UMLS:C1839262"],"synonyms":[{"name":"Turner syndrome-associated Neurocognitive phenotype","type":"related"},{"name":"Turner syndrome-associated neurocognitive phenotype, X-linked recessive","type":"exact"},{"name":"spatial visualization, aptitude for","type":"exact"},{"name":"visuospatial/perceptual abilities","type":"related"},{"name":"visuospatial/perceptual abilities, X-linked recessive","type":"exact"}],"termid":"MONDO:0010734","xrefs":{"Monarch":{"xref_id":"0010734"}}}


id: PBO:0053814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1075","termid":"PBO:0053814"}


id: PBO:0090110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ser) Um(44) 2'-O-methyltransferasetRNA Trm44","termid":"PBO:0090110"}


id: PR:Q9UT24
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U5 small nuclear ribonucleoprotein 200 kDa helicase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11752:SF7","OMA:SCHPO00590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor brr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.03c","secondary_identifiers":["UniProtKB:Q9UT24"],"synonyms":[{"name":"Spom972h-SNRNP200","type":"exact"},{"name":"pre-mRNA-splicing factor spp41 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-mRNA-splicing helicase BRR2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT24"}


id: PBO:0052068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT7 pseudogene 1","termid":"PBO:0052068"}


id: PBO:0052748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 40","termid":"PBO:0052748"}


id: PBO:0034518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nuclear_envelope_during_vegetative_growth","termid":"PBO:0034518"}


id: PBO:0024837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf4 (predicted)","termid":"PBO:0024837"}


id: PBO:0052598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 5","termid":"PBO:0052598"}


id: MOD:00062
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to N-acetyl-L-tyrosine.","definition_xrefs":["PubMed:11857757","PubMed:11999733","PubMed:14730666","PubMed:475783","RESID:AA0053","PubMed:2506074","PubMed:12175151","PubMed:15350136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-tyrosine","synonyms":[{"name":"(2S)-2-acetamido-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"2-acetylamino-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"AcTyr","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetyltyrosine","type":"exact"},{"name":"N-acetyl-L-tyrosine","type":"exact"},{"name":"N-acetylated L-tyrosine","type":"exact"},{"name":"N-acetyltyrosine","type":"exact"}],"termid":"MOD:00062"}


id: PBO:0075322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 2","termid":"PBO:0075322"}


id: PBO:0081460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 329","termid":"PBO:0081460"}


id: PBO:0067016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 26, pseudogene","termid":"PBO:0067016"}


id: GO:0090050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood vessel endothelial cell migration","termid":"GO:0043536"},{"relation_name":"is_a","term_name":"regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090049"},{"relation_name":"positively_regulates","term_name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090050"}


id: MONDO:0001793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Profuse lacrimation.","definition_xrefs":["NCIT:C50552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"excessive tearing","secondary_identifiers":["ICD9:375.20","SCTID:193982009","ICD9:375.2","MESH:D007766","DOID:13757","MEDGEN:57518","UMLS:C0152227"],"synonyms":[{"name":"apparatus disease, lacrimal","type":"related"},{"name":"apparatus diseases, lacrimal","type":"related"},{"name":"disease, lacrimal apparatus","type":"related"},{"name":"diseases, lacrimal apparatus","type":"related"},{"name":"epiphora","type":"exact"},{"name":"excessive tear production","type":"exact"},{"name":"lacrimal apparatus disease","type":"related"},{"name":"watering eye","type":"exact"}],"termid":"MONDO:0001793","xrefs":{"Monarch":{"xref_id":"0001793"}}}


id: SO:0000872
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that is trans-spliced.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"adjacent_to","term_name":"spliced_leader_RNA","termid":"SO:0000636"},{"relation_name":"has_quality","term_name":"trans_spliced","termid":"SO:0000870"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"},{"relation_name":"is_a","term_name":"trans_spliced_transcript","termid":"SO:0000479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_spliced_mRNA","synonyms":[{"name":"trans-spliced mRNA","type":"exact"}],"termid":"SO:0000872"}


id: PBO:0074496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptosome associated protein 25","termid":"PBO:0074496"}


id: FYPO:0002859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the non-growing cell tip is abolished. The new cell tip formed upon cell division does not grow until after new end take-off.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to non-growing cell tip","synonyms":[{"name":"abolished protein localisation to non-growing cell tip","type":"exact"},{"name":"abolished protein localization to new cell end","type":"related"},{"name":"abolished protein localization to new cell tip","type":"related"},{"name":"abolished protein localization to new non-growing cell tip","type":"exact"},{"name":"abolished protein localization to non-growing cell end","type":"exact"},{"name":"abolished protein localization to non-growing cell tip during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to non-growing cell tip during vegetative growth","type":"exact"},{"name":"protein localization to non-growing cell tip abolished","type":"exact"}],"termid":"FYPO:0002859"}


id: PBO:0074285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT3 antisense RNA 2","termid":"PBO:0074285"}


id: FYPO:0003839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus is abnormal during mitotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to nucleolus during mitosis","synonyms":[{"name":"abnormal protein localisation to nucleolus during mitosis","type":"exact"},{"name":"abnormal protein localization to nucleolus during mitosis during vegetative growth","type":"exact"},{"name":"abnormal protein localization to nucleolus during mitotic M phase","type":"related"}],"termid":"FYPO:0003839"}


id: PR:O42945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03207","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.10c","secondary_identifiers":["UniProtKB:O42945"],"synonyms":[{"name":"Spom972h-DHX15","type":"exact"}],"termid":"PR:O42945"}


id: GO:0019181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a halohydrin = an epoxide + a hydrogen halide.","definition_xrefs":["PMID:8017917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"halohydrin hydrogen-halide-lyase activity","termid":"GO:0019181"}


id: PBO:0046022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 3","termid":"PBO:0046022"}


id: MONDO:0957307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"woolly hair-skin fragility syndrome","secondary_identifiers":["MEDGEN:375148","OMIM:620415","UMLS:C1843292"],"termid":"MONDO:0957307","xrefs":{"Monarch":{"xref_id":"0957307"}}}


id: PBO:0049789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 24","termid":"PBO:0049789"}


id: MONDO:0003573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant epithelial neoplasm composed of cells with significant cytologic atypia and nuclear pleomorphism.","definition_xrefs":["NCIT:C4094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleomorphic carcinoma","secondary_identifiers":["DOID:5662","ICDO:8022/3","MEDGEN:87198","UMLS:C0334233","icd11.foundation:1381572140"],"synonyms":[{"name":"pleomorphic carcinoma","type":"exact"},{"name":"pleomorphic carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003573","xrefs":{"Monarch":{"xref_id":"0003573"}}}


id: GO:0097209
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory organelle found in keratinocytes and involved in the formation of an impermeable, lipid-containing membrane that serves as a water barrier and is required for correct skin barrier function.","definition_xrefs":["GOC:cjm","Wikipedia:Lamellar_granule"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body","termid":"GO:0042599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"epidermal lamellar body","termid":"GO:0097209"}


id: PBO:0026797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proteasome_regulatory_particle_binding","termid":"PBO:0026797"}


id: FYPO:0007430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dGTP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular dNTP level","termid":"FYPO:0005752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular dGTP level","synonyms":[{"name":"increased cellular dGTP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dGTP level during vegetative growth","type":"exact"},{"name":"increased dGTP accumulation","type":"related"}],"termid":"FYPO:0007430"}


id: PBO:0062489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 5 pseudogene","termid":"PBO:0062489"}


id: MONDO:0014494
data:
  {"annotated_genes":["SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86860],"is_not":false,"summary":null,"term":"MONDO:0014494"}]},"cv_name":"mondo","definition":"Any generalized pustular psoriasis in which the cause of the disease is a mutation in the AP1S3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00379":null},"genotype_count":0,"is_obsolete":false,"name":"psoriasis 15, pustular, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:863672","OMIM:616106","DOID:0111281","UMLS:C4015235"],"synonyms":[{"name":"AP1S3 generalised pustular psoriasis","type":"exact"},{"name":"AP1S3 generalized pustular psoriasis","type":"exact"},{"name":"PSORS15","type":"related"},{"name":"generalised pustular psoriasis caused by mutation in AP1S3","type":"exact"},{"name":"generalized pustular psoriasis caused by mutation in AP1S3","type":"exact"},{"name":"psoriasis 15, pustular, susceptibility to","type":"exact"},{"name":"susceptibility to pustular psoriasis 15","type":"related"}],"termid":"MONDO:0014494","terms_by_termid":{"MONDO:0014494":null},"xrefs":{"Monarch":{"xref_id":"0014494"}}}


id: PBO:0050694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 9","termid":"PBO:0050694"}


id: GO:1905926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of invadopodium assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invadopodium assembly (obsolete GO:1905926)","synonyms":[{"name":"activation of invadopodium assembly","type":"narrow"},{"name":"activation of invadopodium formation","type":"narrow"},{"name":"positive regulation of invadopodium formation","type":"exact"},{"name":"up regulation of invadopodium assembly","type":"exact"},{"name":"up regulation of invadopodium formation","type":"exact"},{"name":"up-regulation of invadopodium assembly","type":"exact"},{"name":"up-regulation of invadopodium formation","type":"exact"},{"name":"upregulation of invadopodium assembly","type":"exact"},{"name":"upregulation of invadopodium formation","type":"exact"}],"termid":"GO:1905926"}


id: PBO:0080886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N(6)-threonylcarbamoyltransferase domain containing pseudogene 2","termid":"PBO:0080886"}


id: SO:0000126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repressor molecule is required for transcription to stop.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_regulated","termid":"SO:0000123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally_repressed","synonyms":[{"name":"transcriptionally repressed","type":"exact"}],"termid":"SO:0000126"}


id: GO:0010007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric enzyme complex composed of three subunits, all of which are required for enzyme activity, which catalyzes the chelation of Mg by proto IX in an ATP-dependent manner.","definition_xrefs":["PMID:11842180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"magnesium chelatase complex","termid":"GO:0010007"}


id: GO:0106302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-8,9-epoxyeicosatrienoic acid.","definition_xrefs":["PMID:10491410","PMID:8246128","RHEA:64984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate epoxygenase activity","termid":"GO:0008392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"arachidonate 8,9-epoxygenase activity","synonyms":[{"name":"arachidonic acid 8,9-epoxygenase activity","type":"exact"}],"termid":"GO:0106302"}


id: PBO:0035971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_premeiotic_DNA_replication_during_azygotic_meiotic_cell_cycle","termid":"PBO:0035971"}


id: GO:0046595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the directed movement of mRNA to the oocyte pole plasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of RNA localization","termid":"GO:0051236"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0044085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of pole plasm mRNA localization","secondary_identifiers":["GO:0048121"],"synonyms":[{"name":"establishment of oocyte pole plasm mRNA localization","type":"exact"},{"name":"establishment of pole plasm mRNA localisation","type":"exact"}],"termid":"GO:0046595"}


id: SO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature ablation whereby the deleted region includes a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_ablation","termid":"SO:0001879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_ablation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:regulatory_region_ablation","type":"exact"},{"name":"regulatory region ablation","type":"exact"}],"termid":"SO:0001894"}


id: MONDO:0019567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in which the cause of the disease is a mutation in the COL5A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, classic type","termid":"MONDO:0007522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic type, 1","secondary_identifiers":["DOID:14720","MEDGEN:78660","MESH:C536194","UMLS:C0268335","NCIT:C125696","SCTID:83470009","Orphanet:90309","OMIM:130000"],"synonyms":[{"name":"EDS I","type":"exact"},{"name":"EDSCL1","type":"exact"},{"name":"Ehlers-Danlos syndrome, classic type, 1","type":"exact"},{"name":"Ehlers-Danlos syndrome, type 1","type":"exact"},{"name":"Ehlers-Danlos syndrome, type I","type":"exact"},{"name":"type I Ehlers-Danlos syndrome","type":"exact"}],"termid":"MONDO:0019567","xrefs":{"Monarch":{"xref_id":"0019567"}}}


id: PBO:0015686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hikeshi protein, Opi10 (predicted)","termid":"PBO:0015686"}


id: MONDO:0018260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scalp syndrome","secondary_identifiers":["GARD:21592","UMLS:C4751599","MEDGEN:1665599","Orphanet:370052"],"synonyms":[{"name":"sebaceous nevus-CNS malformations-aplasia cutis congenital-limbal dermoid-pigmented nevus syndrome","type":"exact"},{"name":"sebaceous nevus-central nervous system malformations-aplasia cutis congenital-limbal dermoid-pigmented nevus syndrome","type":"exact"}],"termid":"MONDO:0018260","xrefs":{"Monarch":{"xref_id":"0018260"}}}


id: PBO:0057264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 489","termid":"PBO:0057264"}


id: PBO:0091331
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. nidulans PpzA","termid":"PBO:0091331"}


id: GO:0052479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont ethylene-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway (obsolete GO:0052479)","synonyms":[{"name":"negative regulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"exact"},{"name":"suppression by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052479"}


id: PBO:0088701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Mtr3","termid":"PBO:0088701"}


id: PBO:0055582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3018","termid":"PBO:0055582"}


id: PBO:0058344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4717","termid":"PBO:0058344"}


id: GO:0070050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular homeostatic process that preserves a neuron in a stable, differentiated functional and structural state.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron cellular homeostasis","synonyms":[{"name":"neuron maintenance","type":"exact"}],"termid":"GO:0070050"}


id: PBO:0065662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRK antisense RNA 1","termid":"PBO:0065662"}


id: PBO:0066604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T1 pseudogene 3","termid":"PBO:0066604"}


id: PBO:0090257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase complex subunit H","termid":"PBO:0090257"}


id: GO:0098992
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense core vesicle (granule) that is part of a neuron. These vesicles typically contain neuropeptides. They can be found in all parts of neurons, including the soma, dendrites, axonal swellings (varicosities) and synaptic terminals.","definition_xrefs":["Wikipedia:Neuropeptide&oldid=713905176","GOC:dos","ISBN:978-0-07-181001-2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule","termid":"GO:0031045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"neuronal dense core vesicle","termid":"GO:0098992"}


id: GO:0006299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The repair of mismatched DNA where the gap to be repaired is only one nucleotide. DNA polymerase is the preferred polymerase in short patch repair, performing gap filling DNA synthesis and removal of the 5'-deoxyribose phosphate of the abasic site.","definition_xrefs":["PMID:10878254","PMID:10660619"],"gene_count":0,"genotype_count":0,"name":"obsolete short patch mismatch repair system (obsolete GO:0006299)","synonyms":[{"name":"short patch mismatch repair system","type":"exact"}],"termid":"GO:0006299"}


id: PATO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter's disposition the presence of abnormally proliferating masses of cells.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic","synonyms":[{"name":"tumorous","type":"exact"}],"termid":"PATO:0002011"}


id: PBO:0015671
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 7.9x10^3 min-1 M-1","termid":"PBO:0015671"}


id: PR:Q9UTS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtilase-type proteinase psp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.01","synonyms":[{"name":"Spom972h-psp3","type":"exact"}],"termid":"PR:Q9UTS0"}


id: PATO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having reacted with oxygen, or been modified by oxidation (the reaction in which the atoms of an element lose electrons and the valence of the element increases).","definition_xrefs":["Wikipedia:http://en.wiktionary.org/wiki/oxidized"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized","termid":"PATO:0002223"}


id: GO:0010707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of globosides that begins with the formation of lactosylceramides, Gal-beta-(1->4)-Glc-beta-(1->1') ceramides, any compound formed by the replacement of the glycosidic C1 hydroxyl group of lactose by a ceramide group.","definition_xrefs":["GOC:tb","GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"globoside biosynthetic process","termid":"GO:0001576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"globoside biosynthetic process via lactosylceramide","synonyms":[{"name":"biosynthesis of lactosylceramide precursor to globoside","type":"related"},{"name":"globoside biosynthesis via lactosylceramide biosynthesis","type":"exact"},{"name":"lactosylceramide biosynthesis leading to globoside","type":"related"},{"name":"lactosylceramide biosynthetic process leading to globoside","type":"related"}],"termid":"GO:0010707"}


id: GO:0031250
data:
  {"annotated_genes":["SJAG_02948"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71395],"is_not":false,"summary":null,"term":"GO:0031250"}]},"cv_name":"cellular_component","definition":"An enzyme complex composed of 4 subunits, 2 copies of the large protein (nrdD in E. coli) and 2 copies of the small protein (nrdG in E. coli). It catalyzes the generation of 2'deoxyribonucleotides under anaerobic growth conditions. The larger subunit is the catalytic unit that is activated by the smaller iron-binding subunit.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"anaerobic ribonucleoside-triphosphate reductase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031250","terms_by_termid":{"GO:0031250":null}}


id: PBO:0065961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23B pseudogene 3","termid":"PBO:0065961"}


id: PBO:0043715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 3","termid":"PBO:0043715"}


id: PBO:0058497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5691","termid":"PBO:0058497"}


id: PBO:0063420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 3B","termid":"PBO:0063420"}


id: PBO:0026747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_mitotic_S_phase","termid":"PBO:0026747"}


id: PBO:0044077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSTF3 divergent transcript","termid":"PBO:0044077"}


id: PATO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches joined together in a series of prominent arches.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brochidodromous","termid":"PATO:0001970"}


id: PBO:0086172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the ATP-dependent transport of arginine; vacuolar membrane protein; involved in the ATP-dependent transport of arginine into the vacuole and possibly in balancing ion homeostasis; human homolog CLN3 involved in Batten disease (juvenile onset neuronal ceroid lipofuscinosis) can complement yeast null mutant","termid":"PBO:0086172"}


id: PBO:0086704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; may contribute to cell wall biosynthesis, mutants display zymolyase hypersensitivity","termid":"PBO:0086704"}


id: PBO:0073345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 7","termid":"PBO:0073345"}


id: PBO:0078855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 3","termid":"PBO:0078855"}


id: PBO:0030248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cold","termid":"PBO:0030248"}


id: PBO:0073453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 2","termid":"PBO:0073453"}


id: GO:0071762
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgNAR isotype held together by disulfide bonds and lacking immunoglobulin light chains.","definition_xrefs":["PMID:16051357","GOC:add","ISBN:0781765196","PMID:12543123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"heavy chain immunoglobulin complex","synonyms":[{"name":"HCab","type":"narrow"},{"name":"Ig NAR immunoglobulin complex","type":"narrow"},{"name":"IgNAR antibody","type":"narrow"},{"name":"IgNAR immunoglobulin complex","type":"narrow"}],"termid":"GO:0071762"}


id: PBO:0082531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-2 has a paralog, ASP3-4, that arose from a segmental duplication","termid":"PBO:0082531"}


id: GO:0021895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex neuron differentiation","termid":"GO:0021895"}


id: PBO:0048674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid induced 1","termid":"PBO:0048674"}


id: PR:O94385
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pom152 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin pom152 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.07","synonyms":[{"name":"Spom972h-pom152","type":"exact"}],"termid":"PR:O94385"}


id: GO:0010435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + 3-oxo-2-(2'-pentenyl)-cyclopentane-1-octanoic acid + coenzyme A = AMP + diphosphate + 3-oxo-2-(2'-pentenyl)-cyclopentane-1-octanoyl-CoA + H+. 3-oxo-2-(2'-pentenyl)-cyclopentane-1-octanoic acid is also known as OPC-8:0.","definition_xrefs":["PMID:16963437"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-2-(2'-pentenyl)cyclopentane-1-octanoic acid CoA ligase activity (obsolete GO:0010435)","synonyms":[{"name":"3-oxo-2-(2'-[Z]-pentenyl)cyclopentane-1-octanoate CoA ligase activity","type":"exact"},{"name":"3-oxo-2-(2'-pentenyl)cyclopentane-1-octanoic acid (OPC-8:0) CoA ligase activity","type":"exact"},{"name":"OPC-8:0 CoA ligase activity","type":"exact"}],"termid":"GO:0010435"}


id: GO:0009757
data:
  {"annotated_genes":["SJAG_00472","SJAG_01245","SJAG_00574","SJAG_02311","SJAG_01254","SJAG_01754","SJAG_01699","SJAG_02444","SJAG_02426","SJAG_02481","SJAG_00424","SJAG_00610","SJAG_04312","SJAG_03081","SJAG_04551","SJAG_00266","SJAG_04026"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93734,116006,108977,101338,106311,105962,114974,105373,108471],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[91596,99932,115826,92254,107434],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"},{"annotations":[101632,88949,102330],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902660"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of hexose.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar mediated signaling pathway","termid":"GO:0010182"},{"relation_name":"part_of","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00424":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00610":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hexose mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hexose mediated signalling","type":"exact"}],"termid":"GO:0009757","terms_by_termid":{"GO:0010619":null,"GO:0110034":null,"GO:1902660":null}}


id: PBO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog Cbh1","termid":"PBO:0002525"}


id: GO:0014870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle inactivity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inactivity","termid":"GO:0014854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to muscle inactivity","termid":"GO:0014870"}


id: PBO:0047381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 15","termid":"PBO:0047381"}


id: PBO:0090657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 6 Pre5","termid":"PBO:0090657"}


id: PBO:0068617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 69, pseudogene","termid":"PBO:0068617"}


id: FYPO:0003660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased double-strand break repair during vegetative growth","synonyms":[{"name":"decreased double-strand break repair during mitotic cell cycle","type":"related"},{"name":"reduced double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0003660"}


id: MONDO:0032565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ophthalmoplegia, external, with rib and vertebral anomalies","secondary_identifiers":["MEDGEN:1648445","OMIM:618155","UMLS:C4748418"],"synonyms":[{"name":"EORVA","type":"related"},{"name":"OPHTHALMOPLEGIA, EXTERNAL, WITH RIB AND VERTEBRAL ANOMALIES","type":"related"}],"termid":"MONDO:0032565","xrefs":{"Monarch":{"xref_id":"0032565"}}}


id: GO:0070714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an guanosine-uridine insertion dinucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA guanosine-uridine insertion","synonyms":[{"name":"RNA GU insertion","type":"exact"}],"termid":"GO:0070714"}


id: PBO:0113180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kynurenine 3-monooxygenase; required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p; localizes to mitochondria and peroxisomes; putative therapeutic target for Huntington disease","termid":"PBO:0113180"}


id: MONDO:0010864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 2q31.","definition_xrefs":["DOID:0110746","MONDO:patterns/inherited_susceptibility","PMID:7704030"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 7","secondary_identifiers":["UMLS:C1838259","OMIM:600321","MESH:C563957","MEDGEN:333051"],"synonyms":[{"name":"IDDM7","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 7","type":"related"},{"name":"insulin-dependent diabetes mellitus 7","type":"exact"}],"termid":"MONDO:0010864","xrefs":{"Monarch":{"xref_id":"0010864"}}}


id: PBO:0056933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1-1","termid":"PBO:0056933"}


id: FYECO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amorolfine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ amorolfine","synonyms":[{"name":"+ amorolfine","type":"exact"}],"termid":"FYECO:0000424"}


id: PBO:0044825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 112","termid":"PBO:0044825"}


id: PBO:0113014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor; highly enriched in autophagic body fractions of both rapamycin-treated and nitrogen-starved cells; binds directly to forming isolation membranes during bulk autophagy; small protein of 144 amino acid residues without any identifiable membrane-spanning regions; N-terminal 42 amino acid region contains an amphipathic helix and an Atg8-family interacting motif","termid":"PBO:0113014"}


id: FYPO:0007136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus and has an abnormally low volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"small vegetative cell","termid":"FYPO:0000645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"small mononucleate vegetative cell","synonyms":[{"name":"small mononucleate cell during mitotic cell cycle","type":"related"},{"name":"small mononucleate cell during vegetative growth","type":"exact"}],"termid":"FYPO:0007136"}


id: PBO:0069530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 799, pseudogene","termid":"PBO:0069530"}


id: FYPO:0004932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which one or more proteins is localized to the prospore membrane for a longer time than normal.","definition_xrefs":["PMID:20410137","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to prospore membrane","termid":"FYPO:0000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased duration of protein localization to prospore membrane","synonyms":[{"name":"increased duration of protein localisation to prospore membrane","type":"exact"},{"name":"increased duration of protein localization to forespore membrane","type":"exact"},{"name":"prolonged protein localization to prospore membrane","type":"exact"}],"termid":"FYPO:0004932"}


id: FYPO:0007338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 methylation at centromere during vegetative growth","termid":"FYPO:0007337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K4 trimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K4 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K4 trimethylation at centromere","type":"exact"},{"name":"increased histone H3-K4 trimethylation at centromere during mitotic cell cycle during vegetative growth","type":"related"},{"name":"increased histone H3-K4 trimethylation at centromeric region","type":"exact"},{"name":"increased histone H3K4 trimethylation at centromere","type":"exact"},{"name":"increased histone H3K4me3 at centromere","type":"exact"},{"name":"increased histone lysine H3 K4 trimethylation at centromere","type":"exact"}],"termid":"FYPO:0007338"}


id: GO:0021547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the midbrain-hindbrain boundary. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["GOC:dph","GOC:jid","PMID:15541513","GOC:isa_complete","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary development","termid":"GO:0030917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary initiation","synonyms":[{"name":"MHB biosynthesis","type":"exact"},{"name":"MHB formation","type":"exact"},{"name":"isthmus biosynthesis","type":"related"},{"name":"isthmus formation","type":"related"},{"name":"midbrain-hindbrain boundary biosynthesis","type":"exact"},{"name":"midbrain-hindbrain boundary formation","type":"exact"}],"termid":"GO:0021547"}


id: MONDO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth hard tissue disease","secondary_identifiers":["ICD9:521.8","MEDGEN:510140","SCTID:46557008","DOID:214","ICD9:521.89","UMLS:C0155926","ICD10CM:K03"],"synonyms":[{"name":"disorder of hard tissues of teeth","type":"exact"},{"name":"teeth hard tissue disease","type":"related"},{"name":"teeth hard tissue diseases","type":"related"}],"termid":"MONDO:0002220","xrefs":{"Monarch":{"xref_id":"0002220"}}}


id: GO:0006926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any apoptotic process in a cell infected with a virus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete virus-infected cell apoptotic process (obsolete GO:0006926)","synonyms":[{"name":"apoptosis of virus-infected cells","type":"exact"},{"name":"killing virus-infected cells","type":"exact"},{"name":"programmed cell death of virus-infected cells by apoptosis","type":"exact"},{"name":"programmed cell death, virus-infected cells","type":"exact"},{"name":"virus-infected cell apoptosis","type":"narrow"},{"name":"virus-infected cell apoptotic process","type":"exact"},{"name":"virus-infected cell programmed cell death by apoptosis","type":"exact"}],"termid":"GO:0006926"}


id: PBO:0036002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_sumoylation_during_vegetative_growth","termid":"PBO:0036002"}


id: PBO:0054470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1870","termid":"PBO:0054470"}


id: PBO:0003853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex cullin family subunit Apc2","termid":"PBO:0003853"}


id: PBO:0034443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_inositol_phosphate_phosphatase_activity","termid":"PBO:0034443"}


id: MONDO:0032724
data:
  {"annotated_genes":["SJAG_03864"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85664],"is_not":false,"summary":null,"term":"MONDO:0032724"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia with joint laxity","termid":"MONDO:0019675"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03864":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia with joint laxity, type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16348","MEDGEN:1677378","Orphanet:642085","OMIM:618395","DOID:0112200","UMLS:C5193073"],"synonyms":[{"name":"SEMDJL3","type":"exact"},{"name":"SPONDYLOEPIMETAPHYSEAL DYSPLASIA WITH JOINT LAXITY, TYPE 3","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, EXOC6b type","type":"exact"}],"termid":"MONDO:0032724","terms_by_termid":{"MONDO:0032724":null},"xrefs":{"Monarch":{"xref_id":"0032724"}}}


id: GO:0004243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal octapeptide as second stage of processing of some proteins imported in the mitochondrion.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial intermediate peptidase activity (obsolete GO:0004243)","synonyms":[{"name":"MIP","type":"broad"},{"name":"mitochondrial intermediate peptidase activity","type":"exact"},{"name":"mitochondrial intermediate precursor-processing proteinase activity","type":"related"}],"termid":"GO:0004243"}


id: RO:HOM0000025
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"1:many orthology that involves a gene in species A and one of its ortholog in species B, when duplications more recent than the species split have occurred in species B but not in species A.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_1_to_many_orthology_relationship_with","termid":"RO:HOM0000034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_pro-orthology_relationship_with","synonyms":[{"name":"pro-orthologous to","type":"exact"}],"termid":"RO:HOM0000025"}


id: PBO:0062278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 14","termid":"PBO:0062278"}


id: FYPO:0007429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation does not occur during a cellular response to DNA damage.","definition_xrefs":["PMID:15805471","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein degradation during cellular response to DNA damage","synonyms":[{"name":"abolished protein breakdown during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolic process during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolism during cellular response to DNA damage","type":"exact"},{"name":"abolished protein degradation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein degradation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein degradation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0007429"}


id: PBO:0058328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4701","termid":"PBO:0058328"}


id: PBO:0049987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 1 pseudogene 1","termid":"PBO:0049987"}


id: FYPO:0002676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dTTP measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular dTTP level","termid":"FYPO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"dTTP absent from cell","synonyms":[{"name":"dTTP absent from cell during mitotic cell cycle","type":"related"},{"name":"dTTP absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002676"}


id: PBO:0049215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate receptor interacting protein 2","termid":"PBO:0049215"}


id: PBO:0028862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_mRNA_catabolic_process","termid":"PBO:0028862"}


id: PBO:0061344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 2","termid":"PBO:0061344"}


id: GO:0048815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of hermaphrodite genitalia are generated and organized.","definition_xrefs":["ISBN:0140512888","GOC:ems"],"gene_count":0,"genotype_count":0,"name":"obsolete hermaphrodite genitalia morphogenesis (obsolete GO:0048815)","termid":"GO:0048815"}


id: PATO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female","termid":"PATO:0000383"}


id: PBO:0090822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human RAP1 ortholog, GTPase exchange factor, Zfs1 target number 1","termid":"PBO:0090822"}


id: PBO:0113537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; targeted to vacuole via AP-3 pathway; member of multidrug resistance family; not an essential gene","termid":"PBO:0113537"}


id: PBO:0002936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-prenyltransferase (predicted)","termid":"PBO:0002936"}


id: MONDO:0003997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Kaposi sarcoma arising from the colon.","definition_xrefs":["NCIT:C5516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon sarcoma","termid":"MONDO:0003352"},{"relation_name":"is_a","term_name":"colorectal Kaposi sarcoma","termid":"MONDO:0024659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colon Kaposi sarcoma","secondary_identifiers":["DOID:6804","UMLS:C1333091","MEDGEN:232378"],"synonyms":[{"name":"Kaposi's sarcoma (disease) of colon","type":"exact"},{"name":"Kaposi's sarcoma of colon","type":"exact"},{"name":"Kaposi's sarcoma of the colon","type":"exact"},{"name":"colon Kaposi sarcoma","type":"exact"},{"name":"colon Kaposi's sarcoma","type":"exact"},{"name":"colon Kaposi's sarcoma (disease)","type":"exact"},{"name":"colon Kaposis sarcoma","type":"exact"},{"name":"colonic Kaposi sarcoma","type":"exact"},{"name":"colonic Kaposi's sarcoma","type":"exact"},{"name":"colonic Kaposis sarcoma","type":"exact"}],"termid":"MONDO:0003997","xrefs":{"Monarch":{"xref_id":"0003997"}}}


id: MONDO:0018112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Isolated scaphocephaly is a form of nonsyndromic craniosynostosis characterized by premature fusion of the sagittal suture.","definition_xrefs":["Orphanet:35093"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"}],"gene_count":0,"genotype_count":0,"name":"obsolete isolated scaphocephaly (obsolete MONDO:0018112)","secondary_identifiers":["NANDO:2201302"],"synonyms":[{"name":"isolated dolichocephaly","type":"exact"},{"name":"non-syndromic sagittal synostosis","type":"exact"}],"termid":"MONDO:0018112","xrefs":{"Monarch":{"xref_id":"0018112"}}}


id: GO:0045519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-23 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-23 receptor binding","synonyms":[{"name":"IL-23","type":"narrow"},{"name":"interleukin-23 receptor ligand","type":"narrow"}],"termid":"GO:0045519"}


id: PBO:0051166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-49","termid":"PBO:0051166"}


id: FYPO:0006474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to starvation for one or more amino acids is abnormal.","definition_xrefs":["PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"abnormal regulation of translation in response to amino acid starvation","synonyms":[{"name":"abnormal regulation of translation during cellular response to amino acid starvation","type":"exact"},{"name":"abnormal regulation of translation in response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of translation in response to amino acid starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0006474"}


id: GO:0071946
data:
  {"annotated_genes":["SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101764],"is_not":false,"summary":null,"term":"GO:0071946"}]},"cv_name":"biological_process","definition":"A DNA replication termination process that is initiated by protein binding to a binding site on the same chromosome, but remote from the termination site, via DNA looping or chromosome kissing.","definition_xrefs":["GOC:vw","PMID:20850009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific DNA replication termination","termid":"GO:0071170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"cis-acting DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cis acting DNA replication termination","type":"exact"}],"termid":"GO:0071946","terms_by_termid":{"GO:0071946":null}}


id: MONDO:0011763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete T-box 24 (obsolete MONDO:0011763)","secondary_identifiers":["OMIM:607044"],"termid":"MONDO:0011763","xrefs":{"Monarch":{"xref_id":"0011763"}}}


id: PBO:0035843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-aggregated_filamentous_actin_in_cytoplasm","termid":"PBO:0035843"}


id: GO:0015631
data:
  {"annotated_genes":["SJAG_01546","SJAG_04841","SJAG_01613","SJAG_01760","SJAG_01297","SJAG_02040","SJAG_00042","SJAG_02814","SJAG_00930","SJAG_04745","SJAG_00723","SJAG_02624","SJAG_02045","SJAG_02795","SJAG_02609","SJAG_02270","SJAG_00332","SJAG_00851","SJAG_04074","SJAG_02336","SJAG_03073","SJAG_03540","SJAG_00773","SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76305,66735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048487"},{"annotations":[61105,78273,73288,67890,65996,58659,75469,73564,63632,75846,62006,76681,68556,59294,76588,63422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008017"},{"annotations":[71177,70669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051011"},{"annotations":[64931,79428,68198,70133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051010"}]},"cv_name":"molecular_function","definition":"Binding to monomeric or multimeric forms of tubulin, including microtubules.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00332":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01760":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02270":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02795":null,"SJAG_02814":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04074":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0008092","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"tubulin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0015631","terms_by_termid":{"GO:0008017":null,"GO:0048487":null,"GO:0051010":null,"GO:0051011":null}}


id: PR:P40232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A casein kinase II subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11740:SF0","OMA:SCHPO01867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase II subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1851.03","secondary_identifiers":["UniProtKB:P40232"],"synonyms":[{"name":"CK II beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CSNK2B","type":"exact"}],"termid":"PR:P40232"}


id: GO:0015399
data:
  {"annotated_genes":["SJAG_03363","SJAG_MIT04","SJAG_03358","SJAG_03490","SJAG_00976","SJAG_00373","SJAG_03415","SJAG_02646","SJAG_01447","SJAG_05213","SJAG_03560","SJAG_02077","SJAG_01129","SJAG_02602","SJAG_04955","SJAG_01913","SJAG_01077","SJAG_04015","SJAG_01190","SJAG_07007","SJAG_00136","SJAG_01397","SJAG_04757","SJAG_MIT03","SJAG_01879","SJAG_04258","SJAG_MIT20","SJAG_01490","SJAG_04152","SJAG_01669","SJAG_02457","SJAG_01344","SJAG_04167","SJAG_03502","SJAG_01817","SJAG_00755","SJAG_01400","SJAG_07006","SJAG_03866","SJAG_05294","SJAG_02782","SJAG_00212","SJAG_03785","SJAG_03406","SJAG_04277","SJAG_MIT13","SJAG_00601","SJAG_03515","SJAG_03337","SJAG_01435","SJAG_03497","SJAG_05629","SJAG_01355","SJAG_02399","SJAG_01471","SJAG_02504","SJAG_03850","SJAG_02023","SJAG_00516","SJAG_01597"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140481"},{"annotations":[108128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[106655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015421"},{"annotations":[96556,117642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044604"},{"annotations":[111791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140679"},{"annotations":[100370,101083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140359"},{"annotations":[95575,117391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"},{"annotations":[114532,94960,100512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019829"},{"annotations":[117645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042626"},{"annotations":[107745,91459,118485,87714,118486,118514,114902,113670,88737,118464,114101,118513,116263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[112302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[101124,108132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[107322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[114533,100514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015662"},{"annotations":[107323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[111794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008556"},{"annotations":[111795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[87219,113215,87220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[111796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[94961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140358"},{"annotations":[111251,90409,102769,104659,96388,107036,107057,99813,99044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"},{"annotations":[87554,96120,89360,91562,98421,118165,103396,89676,95158,99439,101130,99509,102162,109334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"},{"annotations":[118490,103562,103975,117128,107428,117601,112844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute from one side of a membrane to the other, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is powered by a primary energy source. 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id: PBO:0074315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 5","termid":"PBO:0074315"}


id: PR:O74337
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1A4.04 gene.","definition_xrefs":["UniProtKB:O74337","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.04","synonyms":[{"name":"Spom972h-SPBC1A4.04","type":"exact"}],"termid":"PR:O74337"}


id: GO:1903379
data:
  {"annotated_genes":["SJAG_01837","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101869,116120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic chromosome condensation.","definition_xrefs":["PMID:9490640","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome condensation","termid":"GO:0060623"},{"relation_name":"regulates","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903379","terms_by_termid":{"GO:1903380":null}}


id: GO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct. An example of this is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"ovulation","termid":"GO:0030728"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation from ovarian follicle","termid":"GO:0001542"}


id: GO:0019988
data:
  {"annotated_genes":["SJAG_05228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96530],"is_not":false,"summary":null,"term":"GO:0019988"}]},"cv_name":"biological_process","definition":"The covalent alteration of an amino acid charged on a tRNA before it is incorporated into a protein, as in N-formylmethionine, selenocysteine or pyrrolysine.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"charged-tRNA amino acid modification","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030630"],"synonyms":[{"name":"charged tRNA amino acid modification","type":"exact"},{"name":"charged tRNA modification","type":"exact"},{"name":"charged-tRNA modification","type":"related"},{"name":"pre-translational amino acid modification","type":"exact"},{"name":"pre-translational protein modification","type":"exact"},{"name":"pretranslation protein modification","type":"exact"},{"name":"pretranslational amino acid modification","type":"exact"}],"termid":"GO:0019988","terms_by_termid":{"GO:0019988":null}}


id: GO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroxyapatite, the calcium phosphate mineral of formula Ca10(PO4)6(OH)2 found both in rocks of nonorganic origin and as a component of bone and dentin.","definition_xrefs":["PMID:2438276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hydroxyapatite binding","synonyms":[{"name":"hydroxylapatite binding","type":"exact"}],"termid":"GO:0046848"}


id: FYPO:0001278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which MCM complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal MCM complex assembly","synonyms":[{"name":"normal MCM complex assembly during mitotic cell cycle","type":"related"},{"name":"normal MCM complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001278"}


id: GO:0019703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent linkage of coenzyme A and peptidyl-cysteine to form L-cysteine coenzyme A disulfide.","definition_xrefs":["RESID:AA0306"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme A-peptidyl-cysteine covalent linking (obsolete GO:0019703)","termid":"GO:0019703"}


id: MONDO:1012136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of hepatic metabolism, non-human animal","termid":"MONDO:1011776"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inborn error of hepatic metabolism, dog","secondary_identifiers":["OMIA:000561-9615"],"termid":"MONDO:1012136","xrefs":{"Monarch":{"xref_id":"1012136"}}}


id: PBO:0040235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATF6 divergent transcript","termid":"PBO:0040235"}


id: PBO:0045909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB6 antisense RNA 1","termid":"PBO:0045909"}


id: GO:0061792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to transform an immature secretory vesicle into a mature secretory vesicle. Typically proceeds through homotypic membrane fusion and membrane remodeling.","definition_xrefs":["PMID:16618809","GOC:bf","GOC:PARL","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"},{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secretory granule maturation","termid":"GO:0061792"}


id: MONDO:0044718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"alkaline ceramidase 3 deficiency","secondary_identifiers":["OMIM:617762","Orphanet:502444","MEDGEN:1622324","GARD:17936","UMLS:C4540358"],"synonyms":[{"name":"ACER3-related early childhood-onset progressive leukodystrophy","type":"exact"},{"name":"PLDECO","type":"related"},{"name":"leukodystrophy due to alkaline ceramidase 3 deficiency","type":"exact"},{"name":"leukodystrophy, progressive, early childhood-onset","type":"related"}],"termid":"MONDO:0044718","xrefs":{"Monarch":{"xref_id":"0044718"}}}


id: MONDO:0012393
data:
  {"annotated_genes":["SJAG_00359"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85008],"is_not":false,"summary":null,"term":"MONDO:0012393"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glutamine metabolism","termid":"MONDO:0017352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00359":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"congenital brain dysgenesis due to glutamine synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:610015","DOID:0070544","Orphanet:71278","MEDGEN:400638","GARD:9848","UMLS:C1864910","icd11.foundation:238162640","MESH:C536832"],"synonyms":[{"name":"congenital brain dysgenesis due to glutamine synthetase deficiency","type":"exact"},{"name":"congenital glutamine deficiency","type":"related"},{"name":"glutamine deficiency, congenital","type":"related"},{"name":"glutamine synthase deficiency, congenital systemic","type":"related"},{"name":"glutamine synthetase deficiency, congenital systemic","type":"related"},{"name":"inherited GS deficiency","type":"exact"},{"name":"inherited glutamine synthetase deficiency","type":"exact"}],"termid":"MONDO:0012393","terms_by_termid":{"MONDO:0012393":null},"xrefs":{"Monarch":{"xref_id":"0012393"}}}


id: PBO:0089070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S6","termid":"PBO:0089070"}


id: PR:Q9USR3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- stt4 gene.","definition_xrefs":["UniProtKB:Q9USR3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase stt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.06c","synonyms":[{"name":"PI4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-stt4","type":"exact"}],"termid":"PR:Q9USR3"}


id: PBO:0024870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar aminopeptidase","termid":"PBO:0024870"}


id: GO:0085002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a symbiont secreted substance released by specialized structures generated in either organisms as a result of the symbiotic interaction. The term host is used for the larger (macro) of the two members of a symbiosis.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by secreted substance released by symbiont from symbiotic structure (obsolete GO:0085002)","termid":"GO:0085002"}


id: FYPO:0001710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is stabilized, i.e. interactions between the iron-sulfur cluster and the gene product last longer than in wild type under any given set of conditions. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"stabilized iron-sulfur cluster binding","synonyms":[{"name":"increased duration of iron-sulfur cluster binding","type":"exact"},{"name":"stabilised iron-sulfur cluster binding","type":"exact"},{"name":"stabilized iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0001710"}


id: PBO:0066272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member F","termid":"PBO:0066272"}


id: PBO:0045587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 1","termid":"PBO:0045587"}


id: MONDO:0013848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the GATAD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 2B","secondary_identifiers":["UMLS:C3553409","DOID:0110441","OMIM:614672","GARD:15832","MEDGEN:766323"],"synonyms":[{"name":"CMD2B","type":"exact"},{"name":"GATAD1 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 2B","type":"related"},{"name":"cardiomyopathy, dilated, type 2B","type":"exact"},{"name":"dilated cardiomyopathy 2B","type":"exact"},{"name":"dilated cardiomyopathy type 2B","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in GATAD1","type":"exact"}],"termid":"MONDO:0013848","xrefs":{"Monarch":{"xref_id":"0013848"}}}


id: PBO:0066034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 3","termid":"PBO:0066034"}


id: GO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a phorbol ester and transmitting the signal by a mechanism independent of kinase activity.","definition_xrefs":["PMID:10506570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phorbol ester receptor activity","termid":"GO:0001565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"non-kinase phorbol ester receptor activity","termid":"GO:0001566"}


id: MONDO:0003365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the esophagus. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagus sarcoma","termid":"MONDO:0001204"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophagus leiomyosarcoma","secondary_identifiers":["NCIT:C5334","DOID:5276","MEDGEN:272589","UMLS:C1333454"],"synonyms":[{"name":"esophageal leiomyosarcoma","type":"exact"},{"name":"esophagus leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of esophagus","type":"exact"},{"name":"leiomyosarcoma of oesophagus","type":"exact"},{"name":"leiomyosarcoma of the esophagus","type":"exact"},{"name":"leiomyosarcoma of the oesophagus","type":"exact"}],"termid":"MONDO:0003365","xrefs":{"Monarch":{"xref_id":"0003365"}}}


id: PBO:0085007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of the glucose-sensing signal transduction pathway; required for repression of transcription by Rgt1p; interacts with Rgt1p and the Snf3p and Rgt2p glucose sensors; phosphorylated by Yck1p, triggering Mth1p degradation; MTH1 has a paralog, STD1, that arose from the whole genome duplication","termid":"PBO:0085007"}


id: FYPO:0001429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a larger volume, greater length, greater diameter, and greater length:diameter ratio than normal.","definition_xrefs":["PMID:10388806","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen cell","termid":"FYPO:0000025"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"swollen elongated cell","synonyms":[{"name":"elongated cell with increased cell volume","type":"exact"},{"name":"enlarged elongated cell","type":"related"},{"name":"large elongated cell","type":"related"}],"termid":"FYPO:0001429"}


id: GO:0170054
data:
  {"annotated_genes":["SJAG_05212","SJAG_00686","SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104388,89212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044692"},{"annotations":[91812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061632"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a ribonuclease.","definition_xrefs":["PMID:24736845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activator activity","termid":"GO:0170053"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_04682":null,"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"ribonuclease activator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA nuclease activator activity","type":"exact"}],"termid":"GO:0170054","terms_by_termid":{"GO:0044692":null,"GO:0061632":null}}


id: RO:0002232
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x 'has end location' y if and only if there exists some process z such that x 'ends with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_end_location","termid":"RO:0002232"}


id: MONDO:0021098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glandular or squamous cell neoplastic proliferations characterized by the formation of multiple papillary structures diffusely involving a specific anatomic site.","definition_xrefs":["NCIT:C3713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary epithelial neoplasm","termid":"MONDO:0021096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillomatosis","secondary_identifiers":["UMLS:C0205875","MEDGEN:64459"],"synonyms":[{"name":"papillomatosis","type":"exact"}],"termid":"MONDO:0021098","xrefs":{"Monarch":{"xref_id":"0021098"}}}


id: MONDO:0035639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited acute myeloid leukemia","termid":"MONDO:0017893"},{"relation_name":"is_a","term_name":"mixed phenotype acute leukemia","termid":"MONDO:0020743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"mixed phenotype acute leukemia with t(9;22)(q34.1;q11.2)","secondary_identifiers":["ICD10CM:C92.7","MEDGEN:414807","GARD:22354","Orphanet:589534","UMLS:C2826037"],"synonyms":[{"name":"MPAL with t(9;22)(q34.1;q11.2); BCR-ABL1","type":"exact"}],"termid":"MONDO:0035639","xrefs":{"Monarch":{"xref_id":"0035639"}}}


id: PBO:0113805
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peak copy number 100 at endocytic sites","termid":"PBO:0113805"}


id: GO:2000300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle exocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"regulates","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle exocytosis","termid":"GO:2000300"}


id: GO:0106183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of carbohydrates and their derivatives.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on carbohydrates and their derivatives. (obsolete GO:0106183)","termid":"GO:0106183"}


id: PBO:0083393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF CDC15/YAR019C","termid":"PBO:0083393"}


id: GO:0198738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that mediates the transfer of information from one cell to another, medaited by a wnt family protein ligand. This process includes wnt signal transduction in the receiving cell, release of wnt ligand from a secreting cell as well as any processes that actively facilitate wnt transport and presentation to receptor on the receiving cell.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling by wnt (obsolete GO:0198738)","termid":"GO:0198738"}


id: PBO:0044176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin alpha like 1","termid":"PBO:0044176"}


id: PATO:0001470
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's magnitude in respect to a related entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proportionality to","synonyms":[{"name":"proportion","type":"exact"},{"name":"proportionality","type":"exact"},{"name":"quotient","type":"exact"},{"name":"rate","type":"related"},{"name":"ratio","type":"exact"}],"termid":"PATO:0001470"}


id: MONDO:0004140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immature teratoma characterized by the presence of an intermediate amount of undifferentiated tissues.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant teratoma","termid":"MONDO:0003514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intermediate malignant teratoma","secondary_identifiers":["ICDO:9083/3","NCIT:C4288","MEDGEN:83161","DOID:7202","UMLS:C0334522"],"synonyms":[{"name":"Intermediate immature teratoma","type":"exact"},{"name":"malignant teratoma, intermediate","type":"exact"},{"name":"malignant teratoma, intermediate (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004140","xrefs":{"Monarch":{"xref_id":"0004140"}}}


id: PBO:0057008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 100","termid":"PBO:0057008"}


id: PBO:0001415
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds 5'-TGACTCA-3'","termid":"PBO:0001415"}


id: PBO:0074659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 48B","termid":"PBO:0074659"}


id: PBO:0063647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 4","termid":"PBO:0063647"}


id: GO:1903306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:pad","GOC:PARL","PMID:12526776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"negatively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of regulated secretory pathway","synonyms":[{"name":"down regulation of regulated secretory pathway","type":"exact"},{"name":"down-regulation of regulated secretory pathway","type":"exact"},{"name":"downregulation of regulated secretory pathway","type":"exact"},{"name":"inhibition of regulated secretory pathway","type":"narrow"}],"termid":"GO:1903306"}


id: GO:0072124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"}


id: PBO:0004306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hira protein Slm9","termid":"PBO:0004306"}


id: SO:0001807
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved polypeptide motif that can be recognized by FZR/Cdh1-activated anaphase-promoting complex/cyclosome (APC/C) and targets a protein for ubiquitination and subsequent degradation by the APC/C. The consensus sequence is KENXXXN.","definition_xrefs":["PMID:10733526","PMID:1220884","PMID:18426916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_motif","termid":"SO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"KEN_box","synonyms":[{"name":"KEN box","type":"exact"}],"termid":"SO:0001807"}


id: PBO:0072512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 41","termid":"PBO:0072512"}


id: PBO:0005612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 beta subunit (eEF1B)","termid":"PBO:0005612"}


id: PBO:0051372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-31 (pseudogene)","termid":"PBO:0051372"}


id: PBO:0068461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 38, pseudogene","termid":"PBO:0068461"}


id: PBO:0056624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 6","termid":"PBO:0056624"}


id: PBO:0058054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4275","termid":"PBO:0058054"}


id: PBO:0067454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 578, pseudogene","termid":"PBO:0067454"}


id: PATO:0000660
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000660 angle_quantity (obsolete PATO:0000660)","termid":"PATO:0000660"}


id: RO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_after","termid":"RO:0002086"}


id: PBO:0030622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_alpha-glucosidase_activity","termid":"PBO:0030622"}


id: PBO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase Gst3","termid":"PBO:0001894"}


id: MONDO:0002845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of phlegmonous gastritis, typically progressing to gastric gangrene.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"necrotizing gastritis","secondary_identifiers":["UMLS:C0877152","DOID:4037","NCIT:C27329","MEDGEN:209092"],"synonyms":[{"name":"necrotizing gastritis","type":"exact"}],"termid":"MONDO:0002845","xrefs":{"Monarch":{"xref_id":"0002845"}}}


id: PBO:0026998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_exit_from_mitosis","termid":"PBO:0026998"}


id: PBO:0041454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 67","termid":"PBO:0041454"}


id: MONDO:0012603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dystonia characterized by autosomal dominant inheritance of recurrent brief involuntary hyperkinesias triggered by sudden movements that has material basis in variation in the chromosome region 16q13-q22.1.","definition_xrefs":["DOID:0090054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"episodic kinesigenic dyskinesia","termid":"MONDO:0044202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"episodic kinesigenic dyskinesia 2","secondary_identifiers":["OMIM:611031","MESH:C567026","GARD:15506","MEDGEN:410022","NANDO:1200532","UMLS:C1970238"],"synonyms":[{"name":"EKD2","type":"related"},{"name":"dystonia 19","type":"related"},{"name":"episodic kinesigenic dyskinesia 2","type":"exact"},{"name":"episodic kinesigenic dyskinesia type 2","type":"exact"}],"termid":"MONDO:0012603","xrefs":{"Monarch":{"xref_id":"0012603"}}}


id: PBO:0081709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF628 divergent transcript","termid":"PBO:0081709"}


id: PBO:0069395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 655, pseudogene","termid":"PBO:0069395"}


id: GO:0018188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-proline to form trans-2,3-cis-3,4-dihydroxy-L-proline.","definition_xrefs":["RESID:AA0282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline hydroxylation","termid":"GO:0019511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline di-hydroxylation","termid":"GO:0018188"}


id: GO:0008974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribulose 5-phosphate + ATP = D-ribulose 1,5-bisphosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.19","RHEA:19365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"phosphoribulokinase activity","secondary_identifiers":["KEGG_REACTION:R01523","MetaCyc:PHOSPHORIBULOKINASE-RXN"],"synonyms":[{"name":"5-phosphoribulose kinase activity","type":"related"},{"name":"ATP:D-ribulose-5-phosphate 1-phosphotransferase activity","type":"related"},{"name":"PKK","type":"related"},{"name":"PRK","type":"related"},{"name":"PRuK","type":"related"},{"name":"phosphopentokinase activity","type":"related"},{"name":"phosphoribulokinase (phosphorylating)","type":"related"},{"name":"ribulose phosphate kinase activity","type":"related"},{"name":"ribulose-5-phosphate kinase activity","type":"related"}],"termid":"GO:0008974"}


id: PBO:0074035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 21","termid":"PBO:0074035"}


id: PBO:0059737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 11","termid":"PBO:0059737"}


id: GO:2000049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell-cell adhesion mediated by cadherin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by cadherin","termid":"GO:2000047"},{"relation_name":"positively_regulates","term_name":"cell-cell adhesion mediated by cadherin","termid":"GO:0044331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell-cell adhesion mediated by cadherin","termid":"GO:2000049"}


id: PBO:0031214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_centromeric_outer_repeat_transcript_level","termid":"PBO:0031214"}


id: PBO:0067243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 316, pseudogene","termid":"PBO:0067243"}


id: PR:Q09681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase gmh2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.13c","synonyms":[{"name":"Spom972h-gmh2","type":"exact"}],"termid":"PR:Q09681"}


id: PBO:0070157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 71 pseudogene","termid":"PBO:0070157"}


id: PR:000050524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DASH complex subunit dam1 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-143 of the amino acid sequence represented by UniProtKB:Q9HDZ6. Example: UniProtKB:Q9HDZ6, Ser-143, MOD:00046.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:22375062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DASH complex subunit dam1 (Schizosaccharomyces pombe)","termid":"PR:000050523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dam1/Phos(S143)","pombase_gene_id":"SPAC589.08c","synonyms":[{"name":"PomBase_original_PRO_term_name: DASH complex subunit dam1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-dam1/Phos:1","type":"exact"},{"name":"UniProtKB:Q9HDZ6, Ser-143, MOD:00046","type":"narrow"},{"name":"dam1/Phos(S143)","type":"exact"}],"termid":"PR:000050524"}


id: PBO:0070057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 14, pseudogene","termid":"PBO:0070057"}


id: PBO:0017557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-golgi network aminophospholipid translocase (flippase), Dnf1 (predicted)","termid":"PBO:0017557"}


id: PBO:0007182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase","termid":"PBO:0007182"}


id: PBO:0087760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of THO/TREX complexes; this complex couple transcription elongation with mitotic recombination and with mRNA metabolism and export, subunit of an RNA Pol II complex; regulates lifespan; involved in telomere maintenance; similar to Top1p","termid":"PBO:0087760"}


id: PBO:0077103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMM9 pseudogene 1","termid":"PBO:0077103"}


id: FYPO:0000686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","termid":"FYPO:0000686"}


id: SO:0001998
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small RNA oligo, typically about 20 bases, that guides the cas nuclease to a target DNA sequence in the CRISPR/cas mutagenesis method.","definition_xrefs":["PMID:23934893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sgRNA","synonyms":[{"name":"gRNA","type":"related"},{"name":"guide RNA","type":"related"},{"name":"small guide RNA","type":"exact"}],"termid":"SO:0001998"}


id: PBO:0044132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP1 antisense RNA","termid":"PBO:0044132"}


id: PBO:0046311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease V","termid":"PBO:0046311"}


id: FYPO:0008069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at the mating type locus is observed over an increased portion of the mating-type region.","definition_xrefs":["PMID:18030666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at mating type locus during vegetative growth","termid":"FYPO:0005065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased spatial extent of histone H3-K9 methylation at mating type locus during vegetative growth","termid":"FYPO:0008069"}


id: FYPO:0007142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after exposure to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability following cellular response to ionizing radiation","synonyms":[{"name":"decreased viability following cellular response to ionizing radiation","type":"exact"},{"name":"loss of cell population viability following cellular response to ionizing radiation","type":"exact"},{"name":"loss of viability following cellular response to IR","type":"exact"},{"name":"loss of viability following cellular response to gamma radiation","type":"narrow"},{"name":"loss of viability following ionizing radiation exposure","type":"exact"},{"name":"reduced viability following cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0007142"}


id: PBO:0031281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transport_phenotype","termid":"PBO:0031281"}


id: SO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The RNA component of Ribonuclease P (RNase P), a ubiquitous endoribonuclease, found in archaea, bacteria and eukarya as well as chloroplasts and mitochondria. Its best characterized activity is the generation of mature 5 prime ends of tRNAs by cleaving the 5 prime leader elements of precursor-tRNAs. Cellular RNase Ps are ribonucleoproteins. RNA from bacterial RNase Ps retains its catalytic activity in the absence of the protein subunit, i.e. it is a ribozyme. Isolated eukaryotic and archaeal RNase P RNA has not been shown to retain its catalytic function, but is still essential for the catalytic activity of the holoenzyme. Although the archaeal and eukaryotic holoenzymes have a much greater protein content than the bacterial ones, the RNA cores from all the three lineages are homologous. Helices corresponding to P1, P2, P3, P4, and P10/11 are common to all cellular RNase P RNAs. Yet, there is considerable sequence variation, particularly among the eukaryotic RNAs.","direct_ancestors":[{"relation_name":"is_a","term_name":"enzymatic_RNA","termid":"SO:0000372"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase_P_RNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:RNase_P_RNA","type":"exact"},{"name":"RNase P RNA","type":"exact"}],"termid":"SO:0000386"}


id: PBO:0075664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, non-erythrocytic 5","termid":"PBO:0075664"}


id: MOD:01480
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue into an 5'-fluoro-L-tryptophan.","definition_xrefs":["PubMed:18688235","PubMed:8172898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-tryptophan","termid":"MOD:01226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-fluoro-L-tryptophan","synonyms":[{"name":"5-fluorotryptophan","type":"exact"}],"termid":"MOD:01480"}


id: SO:0000105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the chromosome between the centromere and the telomere. Human chromosomes have two arms, the p arm (short) and the q arm (long) which are separated from each other by the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_arm","synonyms":[{"name":"chromosome arm","type":"exact"}],"termid":"SO:0000105"}


id: PBO:0079332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 18","termid":"PBO:0079332"}


id: MONDO:0006324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biologic subset of breast carcinoma defined by high expression of many genes expressed by adipose and other non-epithelial tissues.","definition_xrefs":["NCIT:C53557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"normal breast-like subtype of breast carcinoma","secondary_identifiers":["EFO:1000402","MEDGEN:771111","UMLS:C3642471"],"synonyms":[{"name":"normal breast-like subtype of breast cancer","type":"exact"},{"name":"normal breast-like subtype of breast carcinoma","type":"exact"}],"termid":"MONDO:0006324","xrefs":{"Monarch":{"xref_id":"0006324"}}}


id: PBO:0041819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac mesoderm enhancer-associated non-coding RNA","termid":"PBO:0041819"}


id: PBO:0085725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the initiation of DNA replication; required for proper assembly of replication proteins at the origins of replication; interacts with the DDK-phosphorylated MCM complex and required for the recruitment of Cdc45p; localizes to nuclear foci that become diffuse upon DNA replication stress; homologous to the human Treslin/Ticrr protein","termid":"PBO:0085725"}


id: GO:0050545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfopyruvate + H+ = CO2 + sulfoacetaldehyde.","definition_xrefs":["RHEA:20948","EC:4.1.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfopyruvate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R05774","MetaCyc:R231-RXN"],"synonyms":[{"name":"sulfopyruvate carboxy-lyase (2-sulfoacetaldehyde-forming)","type":"related"},{"name":"sulfopyruvate carboxy-lyase activity","type":"related"},{"name":"sulphopyruvate decarboxylase activity","type":"exact"}],"termid":"GO:0050545"}


id: _global:ends_after
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_after","secondary_identifiers":["RO:0002086"],"termid":"_global:ends_after"}


id: GO:0031899
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the chromoplast envelope; also faces the chromoplast stroma.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid inner membrane","termid":"GO:0009528"},{"relation_name":"is_a","term_name":"chromoplast membrane","termid":"GO:0046862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast inner membrane","termid":"GO:0031899"}


id: PBO:0075115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 164","termid":"PBO:0075115"}


id: GO:0002792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide secretion","termid":"GO:0002791"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"negatively_regulates","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of peptide secretion","synonyms":[{"name":"down regulation of peptide secretion","type":"exact"},{"name":"down-regulation of peptide secretion","type":"exact"},{"name":"downregulation of peptide secretion","type":"exact"},{"name":"inhibition of peptide secretion","type":"narrow"}],"termid":"GO:0002792"}


id: GO:0030745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + N-alpha,N-alpha-dimethyl-L-histidine = S-adenosyl-L-homocysteine + N-alpha,N-alpha,N-alpha-trimethyl-L-histidine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylhistidine N-methyltransferase activity (obsolete GO:0030745)","termid":"GO:0030745"}


id: MONDO:0010195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Weissenbacher-Zweymuller syndrome (obsolete MONDO:0010195)","termid":"MONDO:0010195","xrefs":{"Monarch":{"xref_id":"0010195"}}}


id: PBO:0084483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific component of the spindle pole body; subunit of the leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms a ring-like structure at the leading edge of the prospore membrane (PSM) during meiosis II; required for PSM growth and closure; DON1 has a paralog, CUE5, that arose from the whole genome","termid":"PBO:0084483"}


id: PBO:0046685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1 pseudogene 3","termid":"PBO:0046685"}


id: PBO:0038647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase 2","termid":"PBO:0038647"}


id: PBO:0085190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two type I myosins; localizes to actin cortical patches; deletion of MYO3 has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization; MYO3 has a paralog, MYO5, that arose from the whole genome duplication","termid":"PBO:0085190"}


id: GO:0140306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of recognizing mature outer membrane lipoproteins in the inner membrane and releasing from the inner membrane so that they can be transported across the periplasmic space to their target location, the outer membrane. This function exists in diderm bacteria, mediated by the LolCDE complex.","definition_xrefs":["PMID:21670534","PMID:10783239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transporter activity","termid":"GO:0140318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0140318"],"is_obsolete":false,"name":"lipoprotein releasing activity","termid":"GO:0140306"}


id: PR:Q9HDY5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1A10.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDY5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB1A10.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.05","synonyms":[{"name":"Spom972h-SPAPB1A10.05","type":"exact"}],"termid":"PR:Q9HDY5"}


id: MONDO:0008321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pruritus, hereditary localized","secondary_identifiers":["MEDGEN:356792","UMLS:C1867499","MESH:C566754","OMIM:177100"],"synonyms":[{"name":"pruritus, hereditary localized","type":"exact"}],"termid":"MONDO:0008321","xrefs":{"Monarch":{"xref_id":"0008321"}}}


id: GO:0014836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a satellite cell becomes restricted such that it will develop into a myoblast. This occurs as part of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:ef","CL:0000056","GOC:mtg_muscle","PMID:16607119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"},{"relation_name":"part_of","term_name":"myoblast differentiation involved in skeletal muscle regeneration","termid":"GO:0014835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment involved in skeletal muscle regeneration","termid":"GO:0014836"}


id: MONDO:0011303
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84625],"is_not":false,"summary":null,"term":"MONDO:0011303"}]},"cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the ACTN4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"},{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:93213","MEDGEN:1636833","MESH:C538457","DOID:0111128","UMLS:C4551527","GARD:15353","OMIM:603278"],"synonyms":[{"name":"ACTN4 focal segmental glomerulosclerosis","type":"exact"},{"name":"FSGS1","type":"exact"},{"name":"familial idiopathic steroid-resistant nephrotic syndrome with focal segmental glomerulosclerosis","type":"exact"},{"name":"familial idiopathic steroid-resistant nephrotic syndrome with focal segmental hyalinosis","type":"related"},{"name":"focal segmental glomerulosclerosis 1","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in ACTN4","type":"exact"},{"name":"focal segmental glomerulosclerosis type 1","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 1","type":"related"}],"termid":"MONDO:0011303","terms_by_termid":{"MONDO:0011303":null},"xrefs":{"Monarch":{"xref_id":"0011303"}}}


id: PR:O74444
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug122 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 122 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.15","synonyms":[{"name":"Spom972h-mug122","type":"exact"}],"termid":"PR:O74444"}


id: GO:0030207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan catabolic process","termid":"GO:0006027"},{"relation_name":"is_a","term_name":"chondroitin sulfate metabolic process","termid":"GO:0030204"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate catabolic process","synonyms":[{"name":"chondroitin sulfate breakdown","type":"exact"},{"name":"chondroitin sulfate catabolism","type":"exact"},{"name":"chondroitin sulfate degradation","type":"exact"},{"name":"chondroitin sulphate catabolic process","type":"exact"},{"name":"chondroitin sulphate catabolism","type":"exact"}],"termid":"GO:0030207"}


id: PBO:0050473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A1","termid":"PBO:0050473"}


id: GO:0090360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"platelet-derived growth factor production","termid":"GO:0090360"}


id: GO:0141088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont initiates, promotes, or enhances the activation of autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated activation of host autophagy (obsolete GO:0141088)","synonyms":[{"name":"induction of host autophagy","type":"exact"},{"name":"positive regulation by symbiont of host autophagy","type":"exact"}],"termid":"GO:0141088"}


id: FYPO:0000221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which the transcription of specific genes is regulated in response to the loss of mitochondrial DNA.","definition_xrefs":["PMID:17868468","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription regulation phenotype, adaptive response to loss of mtDNA (obsolete FYPO:0000221)","synonyms":[{"name":"adaptive expression responses","type":"exact"},{"name":"fission yeast transcription regulation phenotype, adaptive response to loss of mtDNA","type":"exact"},{"name":"transcription regulation phenotype, adaptive response to loss of mtDNA during mitotic cell cycle","type":"related"},{"name":"transcription regulation phenotype, adaptive response to loss of mtDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0000221"}


id: MONDO:0958356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty in male","termid":"MONDO:0958270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary central precocious puberty in male","secondary_identifiers":["UMLS:C5816763","MEDGEN:1853130","Orphanet:650087"],"termid":"MONDO:0958356","xrefs":{"Monarch":{"xref_id":"0958356"}}}


id: GO:0099173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postsynapse organization","synonyms":[{"name":"postsynapse development","type":"exact"},{"name":"postsynapse morphogenesis","type":"related"},{"name":"postsynapse organisation","type":"exact"},{"name":"postsynapse organization and biogenesis","type":"related"}],"termid":"GO:0099173"}


id: PBO:0038411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-term_tracker_item","termid":"PBO:0038411"}


id: PBO:0039577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 6","termid":"PBO:0039577"}


id: PR:P10506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- byr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P10506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase byr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.13","synonyms":[{"name":"MAPK kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAPKK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-byr1","type":"exact"}],"termid":"PR:P10506"}


id: PBO:0072579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 pseudogene 2","termid":"PBO:0072579"}


id: PBO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human HSET","termid":"PBO:0002052"}


id: GO:1902794
data:
  {"annotated_genes":["SJAG_03624","SJAG_03664","SJAG_02382","SJAG_04186","SJAG_04768","SJAG_03844","SJAG_01867","SJAG_04574","SJAG_02622","SJAG_01599","SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87016,90308,103675,109940,111559,115982,117557],"is_not":false,"summary":null,"term":"GO:1902794"},{"annotations":[99796,91372,96692,117554,117195],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"The formation of facultative heterochromatin into a heterochromatin domain, enriched in histone H3 methylated on lysine 9 (H3K9me), by a process independent of small interfering RNAs.","definition_xrefs":["PMID:22144463","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_03844":null,"SJAG_04186":null,"SJAG_04574":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"siRNA-independent facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heterochromatin island assembly","type":"exact"},{"name":"heterochromatin island formation","type":"exact"},{"name":"siRNA-independent facultative heterochromatin assembly","type":"exact"}],"termid":"GO:1902794","terms_by_termid":{"GO:1902794":null,"GO:1902801":null}}


id: GO:1900441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900742"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"narrow"}],"termid":"GO:1900441"}


id: GO:1900295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heptasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of heptasaccharide transport","termid":"GO:1900294"},{"relation_name":"negatively_regulates","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of heptasaccharide transport","synonyms":[{"name":"down regulation of heptasaccharide transport","type":"exact"},{"name":"down-regulation of heptasaccharide transport","type":"exact"},{"name":"downregulation of heptasaccharide transport","type":"exact"},{"name":"inhibition of heptasaccharide transport","type":"narrow"}],"termid":"GO:1900295"}


id: PBO:0034572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_telomerase_RNA_reverse_transcriptase_activity","termid":"PBO:0034572"}


id: PBO:0075930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 22","termid":"PBO:0075930"}


id: PBO:0076358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 5","termid":"PBO:0076358"}


id: PBO:0084558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-associated mitochondrial ribosome receptor; forms a complex with Mba1p to facilitate recruitment of mRNA-specific translational activators to ribosomes; ribosome-associated protein involved in the insertion of newly synthesized proteins into the mitochondrial inner membrane; role in protein export and K+/H+ exchange; localizes to the inner mitochondrial membrane; human ortholog Letm1 implicated in Wolf-Hirschhorn syndrome","termid":"PBO:0084558"}


id: GO:0034243
data:
  {"annotated_genes":["SJAG_00150","SJAG_03967","SJAG_01151","SJAG_02551","SJAG_03061","SJAG_01149","SJAG_03118","SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[114740,105510,102542,104837,108493,116439,95309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription elongation","termid":"GO:0032784"},{"relation_name":"regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01707":null,"SJAG_02551":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090039"],"synonyms":[{"name":"regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0034243","terms_by_termid":{"GO:0032968":null,"GO:0034244":null}}


id: GO:0070051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to fibrinogen, a highly soluble hexameric glycoprotein complex that is found in blood plasma and is converted to fibrin by thrombin in the coagulation cascade.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"fibrinogen binding","termid":"GO:0070051"}


id: GO:0060842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized endothelial cell acquires specialized features of an arterial endothelial cell, a thin flattened cell that lines the inside surfaces of arteries.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"arterial endothelial cell differentiation","termid":"GO:0060842"}


id: FYPO:0002889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and contains one or more abnormal septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable elongated vegetative cell with abnormal septum","synonyms":[{"name":"elongated inviable cell with abnormal septum","type":"exact"},{"name":"inviable elongated abnormally septated vegetative cell","type":"exact"},{"name":"inviable elongated cell with abnormal septum during vegetative growth","type":"exact"},{"name":"inviable elongated vegetative cell with abnormal septum during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell with abnormal septum","type":"exact"}],"termid":"FYPO:0002889"}


id: GO:0061750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sphingomyelin = ceramide + choline phosphate + H+ in an acidic environment.","definition_xrefs":["GOC:dph","PMID:26493087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin phosphodiesterase activity","termid":"GO:0004767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"acid sphingomyelin phosphodiesterase activity","synonyms":[{"name":"acid SMase","type":"related"},{"name":"acid sphingomyelinase","type":"exact"}],"termid":"GO:0061750"}


id: GO:0072094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between cells of the ureteric bud terminus and the kidney mesenchyme that positively regulates the formation of the metanephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle induction","termid":"GO:0072034"},{"relation_name":"is_a","term_name":"positive regulation of metanephros development","termid":"GO:0072216"},{"relation_name":"positively_regulates","term_name":"metanephric renal vesicle formation","termid":"GO:0072093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle induction","synonyms":[{"name":"positive regulation of metanephros formation","type":"broad"}],"termid":"GO:0072094"}


id: MONDO:0015228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pentasomy X is a sex chromosome anomaly caused by the presence of three extra X chromosomes in females (49,XXXXX instead of 46,XX).","definition_xrefs":["Orphanet:11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"pentasomy","termid":"MONDO:0700085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentasomy X","secondary_identifiers":["MESH:C535319","NCIT:C89802","MEDGEN:423649","UMLS:C2937419","icd11.foundation:2087864894","NORD:1565","GARD:5678","SCTID:43248007"],"synonyms":[{"name":"49, XXXXX syndrome","type":"exact"},{"name":"49,XXXXX syndrome","type":"exact"},{"name":"Penta X Syndrome","type":"exact"},{"name":"Pentasomy X syndrome","type":"related"},{"name":"Pentasomy type X","type":"exact"},{"name":"XXXXX syndrome","type":"exact"},{"name":"chromosome X pentasomy","type":"related"},{"name":"chromosome XXXXX syndrome","type":"related"},{"name":"penta X syndrome","type":"exact"},{"name":"penta-X","type":"exact"},{"name":"penta-X syndrome","type":"related"},{"name":"poly-X","type":"exact"}],"termid":"MONDO:0015228","xrefs":{"Monarch":{"xref_id":"0015228"}}}


id: PBO:0029121
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_increased_during_stationary_phase","termid":"PBO:0029121"}


id: SO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The maternal copy of the gene is modified, rendering it transcriptionally silent.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_imprinted","termid":"SO:0000134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally_imprinted","synonyms":[{"name":"maternally imprinted","type":"exact"}],"termid":"SO:0000135"}


id: PBO:0040095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 2B, pseudogene","termid":"PBO:0040095"}


id: MONDO:1011490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complement component 6 deficiency that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement component 6 deficiency, non-human animal","termid":"MONDO:1011423"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 6 deficiency, rabbit","secondary_identifiers":["OMIA:001624-9986"],"synonyms":[{"name":"C6 deficiency, rabbit","type":"exact"}],"termid":"MONDO:1011490","xrefs":{"Monarch":{"xref_id":"1011490"}}}


id: PBO:0040745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain cytoplasmic RNA 1","termid":"PBO:0040745"}


id: MONDO:0018985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete trench fever (obsolete MONDO:0018985)","termid":"MONDO:0018985","xrefs":{"Monarch":{"xref_id":"0018985"}}}


id: PBO:0044854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 135","termid":"PBO:0044854"}


id: PBO:0067852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 154","termid":"PBO:0067852"}


id: PR:O94679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A condensin complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03605","PANTHER:PTHR14222:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.13","secondary_identifiers":["UniProtKB:O94679"],"synonyms":[{"name":"Spom972h-NCAPD2","type":"exact"},{"name":"XCAP-D2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p128 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:O94679"}


id: FYPO:0007315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 8 of histone H4 in heterochromatin at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"},{"relation_name":"is_a","term_name":"increased histone H4-K8 acetylation during vegetative growth","termid":"FYPO:0005308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H4-K8 acetylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H4-K8 acetylation at subtelomere during vegetative growth","type":"related"},{"name":"increased histone H4-K8 acetylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K8 acetylation at subtelomeric heterochromatin region during vegetative growth","type":"exact"},{"name":"increased histone H4K8 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased subtelomeric heterochromatin histone H4K8 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007315"}


id: PBO:0084083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide dissociation stimulator for Sec4p; functions in the post-Golgi secretory pathway; binds zinc, found both on membranes and in the cytosol","termid":"PBO:0084083"}


id: MONDO:0012678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 5","secondary_identifiers":["UMLS:C1969099","MEDGEN:369411","GARD:15517","OMIM:611494","MESH:C566932"],"synonyms":[{"name":"ATFB5","type":"exact"},{"name":"atrial fibrillation, familial, 5","type":"exact"}],"termid":"MONDO:0012678","xrefs":{"Monarch":{"xref_id":"0012678"}}}


id: FYPO:0006351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle microtubules become disconnected from the spindle pole body.","definition_xrefs":["PomBase:mah","PMID:17579515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0001320","FYPO:0002399","FYPO:0000120"],"is_obsolete":false,"name":"mitotic spindle microtubules detached from spindle pole body","synonyms":[{"name":"mitotic spindle microtubules detached from SPB","type":"exact"},{"name":"mitotic spindle microtubules detached from spindle pole body during vegetative growth","type":"exact"},{"name":"spindle microtubules detached from spindle pole body during mitosis","type":"exact"},{"name":"spindle microtubules detached from spindle pole body during mitotic cell cycle","type":"exact"},{"name":"spindle pole body detached from mitotic spindle microtubules","type":"exact"}],"termid":"FYPO:0006351"}


id: PBO:0001503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase (predicted)","termid":"PBO:0001503"}


id: MOD:01915
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-formyl-L-alanine.","definition_xrefs":["PubMed:9334739","RESID:AA0576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyl-L-alanine","synonyms":[{"name":"(2S)-2-(formylamino)propanoic acid","type":"exact"},{"name":"2-formamidopropanoic acid","type":"exact"},{"name":"2-formamidopropionic acid","type":"exact"},{"name":"N-formyl-L-alanine","type":"exact"}],"termid":"MOD:01915"}


id: FYPO:0007193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mitochondria are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"small fragmented mitochondria","synonyms":[{"name":"small mitochondria during mitotic cell cycle","type":"related"},{"name":"small mitochondria during vegetative growth","type":"exact"}],"termid":"FYPO:0007193"}


id: PBO:0053093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3A","termid":"PBO:0053093"}


id: PBO:0058193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4486","termid":"PBO:0058193"}


id: PBO:0089904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein, implicated in cellular detoxification","termid":"PBO:0089904"}


id: PBO:0068994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 238, pseudogene","termid":"PBO:0068994"}


id: MONDO:0002646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the larynx caused by viruses, including rhinovirus, influenza virus, parainfluenza virus, and adenovirus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute laryngitis","termid":"MONDO:0004777"},{"relation_name":"is_a","term_name":"viral respiratory tract infection","termid":"MONDO:0024352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral laryngitis","secondary_identifiers":["DOID:3436","NCIT:C27305","UMLS:C0853195","ICD9:464.00","SCTID:441551009","MEDGEN:167276"],"synonyms":[{"name":"Viruses caused laryngitis","type":"exact"},{"name":"Viruses laryngitis","type":"exact"}],"termid":"MONDO:0002646","xrefs":{"Monarch":{"xref_id":"0002646"}}}


id: MONDO:0032747
data:
  {"annotated_genes":["SJAG_01156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86651],"is_not":false,"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydatidiform mole","termid":"MONDO:0006248"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01156":null},"genotype_count":0,"is_obsolete":false,"name":"hydatidiform mole, recurrent, 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18368","MEDGEN:1677210","OMIM:618432","UMLS:C5193094"],"synonyms":[{"name":"HYDATIDIFORM MOLE, RECURRENT, 4","type":"related"},{"name":"HYDM4","type":"related"}],"termid":"MONDO:0032747","terms_by_termid":{"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0032747"}}}


id: GO:0042852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid.","definition_xrefs":["GOC:jl","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine biosynthetic process","termid":"GO:0006523"},{"relation_name":"is_a","term_name":"pyruvate family amino acid biosynthetic process","termid":"GO:0009079"},{"relation_name":"is_a","term_name":"L-alanine metabolic process","termid":"GO:0042851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-alanine biosynthetic process","synonyms":[{"name":"L-alanine anabolism","type":"exact"},{"name":"L-alanine biosynthesis","type":"exact"},{"name":"L-alanine formation","type":"exact"},{"name":"L-alanine synthesis","type":"exact"}],"termid":"GO:0042852"}


id: GO:0019854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ascorbic acid metabolic process","termid":"GO:0019852"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0005975","GO:0006766"],"is_obsolete":false,"name":"L-ascorbic acid catabolic process","secondary_identifiers":["MetaCyc:PWY0-301"],"synonyms":[{"name":"L-ascorbic acid breakdown","type":"exact"},{"name":"L-ascorbic acid catabolism","type":"exact"},{"name":"L-ascorbic acid degradation","type":"exact"},{"name":"ascorbate catabolic process","type":"exact"},{"name":"ascorbate catabolism","type":"exact"},{"name":"vitamin C catabolic process","type":"exact"},{"name":"vitamin C catabolism","type":"exact"}],"termid":"GO:0019854"}


id: GO:0046432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA, a derivative of coenzyme A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA metabolic process","synonyms":[{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA metabolism","type":"exact"}],"termid":"GO:0046432"}


id: PBO:0082149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-protein thioesterase responsible for depalmitoylation of Gpa1p; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and nucleus and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0082149"}


id: PR:O74758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17D11.03c gene.","definition_xrefs":["UniProtKB:O74758","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.03c","synonyms":[{"name":"Spom972h-SPBC17D11.03c","type":"exact"}],"termid":"PR:O74758"}


id: PR:Q09695
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psr1 gene.","definition_xrefs":["UniProtKB:Q09695","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.02c","synonyms":[{"name":"Spom972h-psr1","type":"exact"}],"termid":"PR:Q09695"}


id: MONDO:0003536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fallopian tube serous adenocarcinoma (obsolete MONDO:0003536)","termid":"MONDO:0003536","xrefs":{"Monarch":{"xref_id":"0003536"}}}


id: SO:0005850
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-covalent primer binding site for initiation of replication, transcription, or reverse transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_binding_site","termid":"SO:0001655"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primer_binding_site","secondary_identifiers":["http://en.wikipedia.org/wiki/Primer_binding_site"],"synonyms":[{"name":"INSDC_feature:primer_bind","type":"exact"},{"name":"primer binding site","type":"exact"}],"termid":"SO:0005850"}


id: GO:0071820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an N-box, a DNA motif with the consensus sequence CACNAG that is found in the promoters of genes expressed preferentially at synapses.","definition_xrefs":["GOC:yaf","PMID:11498047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"N-box binding","synonyms":[{"name":"N box binding","type":"exact"},{"name":"N-box promoter binding","type":"exact"}],"termid":"GO:0071820"}


id: GO:0051970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"regulation of transmission of nerve impulse","termid":"GO:0051969"},{"relation_name":"negatively_regulates","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transmission of nerve impulse","synonyms":[{"name":"down regulation of transmission of nerve impulse","type":"exact"},{"name":"down-regulation of transmission of nerve impulse","type":"exact"},{"name":"downregulation of transmission of nerve impulse","type":"exact"},{"name":"inhibition of transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of conduction of nerve impulse","type":"exact"}],"termid":"GO:0051970"}


id: PBO:0113251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two type I myosin motors; involved in clathrin-mediated endocytosis; activation by TEDS site phosphorylation increases actin gliding, motor activity and ligand-induced endocytosis; contains proline-rich tail homology 2 (TH2) and SH3 domains; MYO5 deletion has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization; MYO5 has a paralog, MYO3, that arose from the whole genome duplication","termid":"PBO:0113251"}


id: MOD:01881
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-valine residue by a free radical process effectively releasing a hydrogen molecule and forming 3-(L-phenylalan-2'-yl)-L-valine.","definition_xrefs":["RESID:AA0565","PubMed:21596985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(L-phenylalan-2'-yl)-L-valine","synonyms":[{"name":"(2S)-2-amino-4-(2-[(2S)-2-amino-2-carboxyethyl]phenyl)-3-methylbutanoic acid","type":"exact"},{"name":"3-(L-phenylalan-2'-yl)-L-valine","type":"exact"},{"name":"symerythrin valine-phenylalanine cross-link","type":"exact"}],"termid":"MOD:01881"}


id: MONDO:0017795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common odontogenic tumor, arising from the epithelial component of the embryonic tooth and usually affecting the molar-ramus region of the mandible or maxilla. Although most ameloblastomas are morphologically and clinically benign, they may cause extensive local destruction, recur, or metastasize.","definition_xrefs":["NCIT:C4313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system benign neoplasm","termid":"MONDO:0000636"},{"relation_name":"is_a","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ameloblastoma","secondary_identifiers":["UMLS:C0002448","MESH:D000564","GARD:5747","NORD:764","MEDGEN:1457","SCTID:285311001","ICDO:9310/0","DOID:0050894","MedDRA:10066796","Orphanet:314419"],"synonyms":[{"name":"Adenoameloblastoma","type":"related"},{"name":"adamantinoma","type":"related"},{"name":"adenomatoid odontogenic tumor","type":"related"},{"name":"adenomatoid odontogenic tumour","type":"related"},{"name":"ameloblastoma","type":"exact"},{"name":"ameloblastoma of jaw","type":"exact"},{"name":"aot","type":"related"}],"termid":"MONDO:0017795","xrefs":{"Monarch":{"xref_id":"0017795"}}}


id: GO:0045258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The enzyme, located in the plasma membrane, that catalyzes the oxidation of succinate and ubiquinone to fumarate and ubiquinol; involved in aerobic respiration, repressed in anaerobic respiration.","definition_xrefs":["GOC:kd","GOC:mtg_sensu","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane succinate dehydrogenase complex (ubiquinone) (obsolete GO:0045258)","termid":"GO:0045258"}


id: MONDO:0024772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked, syndromic, Pilorge type","secondary_identifiers":["OMIM:301076","DOID:0070422","UMLS:C5676881","MEDGEN:1803486"],"synonyms":[{"name":"MRXSP","type":"exact"},{"name":"intellectual developmental disorder, X-linked, syndromic, Pilorge type","type":"exact"}],"termid":"MONDO:0024772","xrefs":{"Monarch":{"xref_id":"0024772"}}}


id: PBO:0049883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 2","termid":"PBO:0049883"}


id: PBO:0044468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 7 subfamily A member 1","termid":"PBO:0044468"}


id: GO:0051162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabitol metabolic process","termid":"GO:0051161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-arabitol metabolic process","synonyms":[{"name":"L-arabitol metabolism","type":"exact"}],"termid":"GO:0051162"}


id: MONDO:0700171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma that occurs in a horse.","definition_xrefs":["NCIT:C134569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma, non-human animal","termid":"MONDO:0700132"},{"relation_name":"is_a","term_name":"equine neoplasm","termid":"MONDO:0700170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horse melanoma","secondary_identifiers":["OMIA:002231-9796"],"termid":"MONDO:0700171","xrefs":{"Monarch":{"xref_id":"0700171"}}}


id: MONDO:0018773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"},{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426","MONDO:0002320","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"autosomal dominant distal axonal motor neuropathy-myofibrillar myopathy syndrome","secondary_identifiers":["Orphanet:476093","MEDGEN:1799560","UMLS:C5568137","GARD:21949"],"termid":"MONDO:0018773","xrefs":{"Monarch":{"xref_id":"0018773"}}}


id: GO:1905213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic chromosome condensation.","definition_xrefs":["PMID:23219725","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of chromosome condensation","termid":"GO:1902340"},{"relation_name":"is_a","term_name":"regulation of mitotic chromosome condensation","termid":"GO:1903379"},{"relation_name":"negatively_regulates","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic chromosome condensation","termid":"GO:1905213"}


id: PBO:0058777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7111","termid":"PBO:0058777"}


id: MONDO:0016923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 3 disorder","termid":"MONDO:0700010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 3","secondary_identifiers":["GARD:20844","UMLS:C4518491","MEDGEN:1372547","SCTID:726341009","Orphanet:262201"],"synonyms":[{"name":"partial duplication of chromosome type 3","type":"exact"},{"name":"partial trisomy of chromosome 3","type":"exact"}],"termid":"MONDO:0016923","xrefs":{"Monarch":{"xref_id":"0016923"}}}


id: MONDO:0015415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oblique facial cleft (obsolete MONDO:0015415)","secondary_identifiers":["Orphanet:141253"],"synonyms":[{"name":"Orbitofacial cleft","type":"exact"}],"termid":"MONDO:0015415","xrefs":{"Monarch":{"xref_id":"0015415"}}}


id: PBO:0082266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminophospholipid translocase (flippase); type 4 P-type ATPase; involved in phospholipid translocation, contributing to endocytosis, protein transport, and cellular polarization; localizes primarily to the plasma membrane; localizes to the shmoo tip where it has a redundant role in the cellular response to mating pheromone; DNF2 has a paralog, DNF1, that arose from the whole genome duplication","termid":"PBO:0082266"}


id: PBO:0003447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq7","termid":"PBO:0003447"}


id: MONDO:0016453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Foodborne botulism is the most common form of botulism, a rare acquired neuromuscular junction disease with descending flaccid paralysis due to botulinum neurotoxins (BoNTs). It is caused by consumption of contaminated food containing BoNTs.","definition_xrefs":["Orphanet:228371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"botulism","termid":"MONDO:0005498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foodborne botulism","secondary_identifiers":["ICD9:005.1","icd11.foundation:2033726602","DOID:0050352","NCIT:C128341","MEDGEN:320728","SCTID:398523009","UMLS:C1739094","GARD:20591"],"synonyms":[{"name":"intoxication botulism","type":"exact"}],"termid":"MONDO:0016453","xrefs":{"Monarch":{"xref_id":"0016453"}}}


id: SO:0000607
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of an edited transcript that will not be edited.","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unedited_region","synonyms":[{"name":"unedited region","type":"exact"}],"termid":"SO:0000607"}


id: PR:P78774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2/3 complex subunit 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2/3 complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.06","secondary_identifiers":["UniProtKB:P78774"],"synonyms":[{"name":"Spom972h-ARPC1A","type":"exact"},{"name":"arp2/3 complex 41 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p41-ARC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78774"}


id: PBO:0080598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 31","termid":"PBO:0080598"}


id: MONDO:1010315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Periodontitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"mouth disorder, non-human animal","termid":"MONDO:1011333"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodontitis, non-human animal","secondary_identifiers":["OMIA:002056"],"termid":"MONDO:1010315","xrefs":{"Monarch":{"xref_id":"1010315"}}}


id: GO:0052426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism effects a change in the structure or function of its symbiont organism, mediated by a substance secreted by a type IV secretion system in the organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system (obsolete GO:0052426)","synonyms":[{"name":"modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system","type":"exact"}],"termid":"GO:0052426"}


id: PBO:0057036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 129-2","termid":"PBO:0057036"}


id: FYPO:0005483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an inositol phosphate phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"},{"relation_name":"is_a","term_name":"abnormal inositol phosphate phosphatase activity","termid":"FYPO:0005482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased inositol phosphate phosphatase activity","termid":"FYPO:0005483"}


id: MONDO:0850083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic bicoronal and sagittal craniosynostosis","secondary_identifiers":["UMLS:C5680391","MEDGEN:1842401","Orphanet:620205","GARD:22480"],"termid":"MONDO:0850083","xrefs":{"Monarch":{"xref_id":"0850083"}}}


