# terms

id: PBO:0083827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of U3-containing 90S preribosome; involved in production of 18S rRNA and assembly of small ribosomal subunit; also part of pre-40S ribosome and required for its export into cytoplasm; binds RNA and contains pumilio domain","termid":"PBO:0083827"}


id: MONDO:0957576
data:
  {"annotated_genes":["SJAG_00078","SJAG_01270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85912,85913],"is_not":false,"summary":null,"term":"MONDO:0957576"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease","termid":"MONDO:0005180"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_01270":null},"genotype_count":0,"is_obsolete":false,"name":"parkinson disease 25, autosomal recessive early-onset, with impaired intellectual development","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1845571","UMLS:C5882680","OMIM:620482","DOID:0070486"],"termid":"MONDO:0957576","terms_by_termid":{"MONDO:0957576":null},"xrefs":{"Monarch":{"xref_id":"0957576"}}}


id: GO:0106260
data:
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id: MONDO:0007766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Morgagni-Stewart-Morel syndrome is characterized by thickening of the inner table of the frontal bone, sometimes associated with obesity and hypertrichosis. It mainly affects women over 35 years of age. The prevalence and clinical significance of hyperostosis frontalis interna is unknown. Transmission is either X-linked or autosomal dominant.","definition_xrefs":["Orphanet:77296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Morgagni-Stewart-Morel syndrome","secondary_identifiers":["SCTID:82054006","NCIT:C84772","GARD:8593","MESH:D006957","NORD:1268","OMIM:144800","UMLS:C0020494","MEDGEN:9367"],"synonyms":[{"name":"Hyperostosis Frontalis Interna","type":"exact"},{"name":"MSM syndrome","type":"related"},{"name":"Morgagni-Stewart-Morel syndrome","type":"exact"},{"name":"hyperostosis frontalis interna","type":"exact"},{"name":"hyperostosis frontalis interna, obesity, shortness and cognitive impairment","type":"related"}],"termid":"MONDO:0007766","xrefs":{"Monarch":{"xref_id":"0007766"}}}


id: PBO:0045853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 43","termid":"PBO:0045853"}


id: SO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000402 enhancer_attribute (obsolete SO:0000402)","termid":"SO:0000402"}


id: GO:0031795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G protein-coupled (metabotropic) GABA receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"},{"relation_name":"is_a","term_name":"GABA receptor binding","termid":"GO:0050811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"G protein-coupled GABA receptor binding","synonyms":[{"name":"G-protein coupled GABA receptor binding","type":"exact"},{"name":"GABAB receptor binding","type":"exact"},{"name":"metabotropic GABA receptor binding","type":"exact"},{"name":"metabotropic GABA receptor ligand","type":"narrow"}],"termid":"GO:0031795"}


id: PBO:0078729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 4-1","termid":"PBO:0078729"}


id: PBO:0072564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAS2 pseudogene 2","termid":"PBO:0072564"}


id: PBO:0087762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC1 (Tor1p or Tor2p-Kog1p-Lst8p-Tco89p); regulates global H3K56ac; TORC1 complex regulates growth in response to nutrient availability; cooperates with Ssd1p in the maintenance of cellular integrity; deletion strains are hypersensitive to rapamycin","termid":"PBO:0087762"}


id: PBO:0076023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 19","termid":"PBO:0076023"}


id: SO:0001527
data:
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id: MONDO:0012300
data:
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id: PBO:0050492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B2","termid":"PBO:0050492"}


id: MONDO:0030263
data:
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id: FYPO:0000795
data:
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id: PR:P04913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- htb1 gene.","definition_xrefs":["UniProtKB:P04913","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.09","synonyms":[{"name":"H2B.1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-htb1","type":"exact"}],"termid":"PR:P04913"}


id: PBO:0069065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 312, pseudogene","termid":"PBO:0069065"}


id: PR:Q9UUE1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate carboxylase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.11c","secondary_identifiers":["UniProtKB:Q9UUE1"],"synonyms":[{"name":"PCB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC17G9.11c","type":"related"},{"name":"Spom972h-PC","type":"exact"},{"name":"pyruvic carboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE1"}


id: GO:0045770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asymmetric cell division","termid":"GO:0009786"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"positively_regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asymmetric cell division","synonyms":[{"name":"activation of asymmetric cell division","type":"narrow"},{"name":"stimulation of asymmetric cell division","type":"narrow"},{"name":"up regulation of asymmetric cell division","type":"exact"},{"name":"up-regulation of asymmetric cell division","type":"exact"},{"name":"upregulation of asymmetric cell division","type":"exact"}],"termid":"GO:0045770"}


id: GO:1905806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synapse pruning.","definition_xrefs":["PMID:27779093","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse pruning","synonyms":[{"name":"regulation of synapse clearance","type":"exact"},{"name":"regulation of synapse disassembly","type":"exact"},{"name":"regulation of synapse elimination","type":"exact"},{"name":"regulation of synapse removal","type":"exact"}],"termid":"GO:1905806"}


id: MONDO:0007656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare and fatal disorder of spongiform encephalopathy usually caused by mutations of the prion protein (PRNP) gene. It is characterized by the accumulation of amyloid in the brain. Signs and symptoms include lack of motor coordination, unsteady gait, and difficulty walking. As the disease progresses, patients develop speech difficulties and dementia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gerstmann-Straussler-Scheinker syndrome","secondary_identifiers":["UMLS:C0017495","ICD10CM:A81.82","MESH:C535800","MEDGEN:4886","DOID:4249","MedDRA:10072075","NANDO:1200190","NCIT:C84727","OMIM:137440","GARD:7690","ICD9:046.71","Orphanet:356","SCTID:67155006","icd11.foundation:406818835"],"synonyms":[{"name":"GSD","type":"related"},{"name":"Gerstmann Straussler Scheinker syndrome","type":"related"},{"name":"Gerstmann-Straussler disease","type":"related"},{"name":"Gerstmann-Straussler-Scheinker disease","type":"exact"},{"name":"amyloidosis cerebral with spongiform encephalopathy","type":"related"},{"name":"amyloidosis, cerebral, with spongiform encephalopathy","type":"related"},{"name":"cerebellar ataxia, progressive dementia, and amyloid deposits in CNS","type":"related"},{"name":"cerebellar ataxia, progressive dementia, and amyloid deposits in the central nervous system","type":"related"},{"name":"cerebral amyloid angiopathy, Prnp-related","type":"related"},{"name":"encephalopathy subacute spongiform Gerstmann-Straussler type","type":"related"},{"name":"encephalopathy, Subacute spongiform, Gerstmann-Straussler type","type":"related"},{"name":"prion dementia","type":"exact"},{"name":"subacute spongiform encephalopathy, Gerstmann-Straussler type","type":"exact"}],"termid":"MONDO:0007656","xrefs":{"Monarch":{"xref_id":"0007656"}}}


id: GO:0102048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-isoleucine + ATP(4-) = H+ + indole-3-acetyl-isoleucine + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz","PMID:15659623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetyl-isoleucine synthetase activity","secondary_identifiers":["MetaCyc:RXN-10430"],"termid":"GO:0102048"}


id: PBO:0078100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 8","termid":"PBO:0078100"}


id: GO:1905246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of aspartic-type peptidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:jl","PMID:21745575"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of aspartic-type peptidase activity (obsolete GO:1905246)","synonyms":[{"name":"down regulation of aspartic-type peptidase activity","type":"exact"},{"name":"down-regulation of aspartic-type peptidase activity","type":"exact"},{"name":"downregulation of aspartic-type peptidase activity","type":"exact"},{"name":"inhibition of aspartic-type peptidase activity","type":"narrow"},{"name":"pepsin inhibitor","type":"related"}],"termid":"GO:1905246"}


id: PBO:0000185
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperglycinemia","termid":"PBO:0000185"}


id: GO:0101028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the surface tension of a liquid.","definition_xrefs":["GOC:sl","PMID:20949060"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of liquid surface tension (obsolete GO:0101028)","synonyms":[{"name":"positive regulation of surface tension of a liquid","type":"exact"}],"termid":"GO:0101028"}


id: FYPO:0000745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch internalization begins later than normal. Actin cortical patch internalization is the process in which the patch moves from the cell surface to the inside of the cell.","definition_xrefs":["PMID:21620704","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch internalization","termid":"FYPO:0000743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0004803"],"is_obsolete":false,"name":"delayed onset of actin cortical patch internalization","synonyms":[{"name":"delayed actin cortical patch internalization","type":"exact"},{"name":"delayed onset of F-actin patch internalization","type":"exact"},{"name":"delayed onset of abnormal actin cortical patch internalization during vegetative growth","type":"exact"},{"name":"delayed onset of actin cortical patch internalisation","type":"exact"},{"name":"delayed onset of actin cortical patch internalization during mitotic cell cycle","type":"related"},{"name":"delayed onset of actin patch internalization","type":"exact"}],"termid":"FYPO:0000745"}


id: GO:0003376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by sphingosine-1-phosphate binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ascb_2009","GOC:signaling","PMID:14592418","PMID:22001186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"sphingolipid mediated signaling pathway","termid":"GO:0090520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sphingosine-1-phosphate receptor signaling pathway","secondary_identifiers":["GO:0001789"],"synonyms":[{"name":"S1P receptor signaling pathway","type":"exact"},{"name":"S1P signaling pathway","type":"related"},{"name":"S1P-activated G-protein coupled receptor signaling pathway","type":"exact"},{"name":"S1P-activated GPCR signaling pathway","type":"exact"},{"name":"S1P-stimulated signal transduction pathway","type":"exact"},{"name":"sphingolipid signaling pathway","type":"broad"},{"name":"sphingolipid signalling pathway","type":"broad"}],"termid":"GO:0003376"}


id: MONDO:0020210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hyperopia that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic hyperopia (obsolete MONDO:0020210)","secondary_identifiers":["Orphanet:98622"],"synonyms":[{"name":"syndrome associated with hyperopia","type":"exact"},{"name":"syndromic hyperopia","type":"exact"}],"termid":"MONDO:0020210","xrefs":{"Monarch":{"xref_id":"0020210"}}}


id: PBO:0039509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 29","termid":"PBO:0039509"}


id: PBO:0030831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_Okazaki_fragments","termid":"PBO:0030831"}


id: PBO:0030003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-P-bodies_present_in_increased_numbers","termid":"PBO:0030003"}


id: MONDO:0017339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exfoliative ichthyosis is an inherited, non-syndromic, congenital ichthyosis characterized by the infancy-onset of palmoplantar peeling of the skin (aggravated by exposure to water and by occlusion) associated with dry, scaly skin over most of the body. Pruritus and hypohidrosis may also be associated. Well-demarcated areas of denuded skin appear in moist and traumatized regions and skin biopsies reveal reduced cell-cell adhesion in the basal and suprabasal layers, prominent intercellular edema, numerous aggregates of keratin filaments in basal keratinocytes, attenuated cornified cell envelopes, and epidermal barrier impairment.","definition_xrefs":["Orphanet:289586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"exfoliative ichthyosis","secondary_identifiers":["MEDGEN:325027","UMLS:C1838440","GARD:17329"],"synonyms":[{"name":"autosomal recessive exfoliative ichthyosis","type":"exact"},{"name":"exfoliative ichthyosis","type":"exact"},{"name":"ichthyosis exfoliativa","type":"exact"}],"termid":"MONDO:0017339","xrefs":{"Monarch":{"xref_id":"0017339"}}}


id: GO:0062088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of vein smooth muscle contraction.","definition_xrefs":["PMID:8428203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vein smooth muscle contraction","termid":"GO:0062086"},{"relation_name":"is_a","term_name":"negative regulation of vascular associated smooth muscle contraction","termid":"GO:1904694"},{"relation_name":"negatively_regulates","term_name":"vein smooth muscle contraction","termid":"GO:0014826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vein smooth muscle contraction","termid":"GO:0062088"}


id: PBO:0014309
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae MET22","termid":"PBO:0014309"}


id: PBO:0077678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 9","termid":"PBO:0077678"}


id: GO:0006786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heme c, a derivative of heme found in cytochromes c, b4, and f.","definition_xrefs":["PubChem_Compound:122208","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme biosynthetic process","termid":"GO:0006783"},{"relation_name":"is_a","term_name":"heme C metabolic process","termid":"GO:0046162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme C biosynthetic process","synonyms":[{"name":"haem C biosynthesis","type":"exact"},{"name":"haem C biosynthetic process","type":"exact"},{"name":"heme C anabolism","type":"exact"},{"name":"heme C biosynthesis","type":"exact"},{"name":"heme C formation","type":"exact"},{"name":"heme C synthesis","type":"exact"}],"termid":"GO:0006786"}


id: MONDO:0002946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired occlusion of an opening in any part of the female genital tract.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gynatresia","secondary_identifiers":["MEDGEN:42316","NCIT:C84743","DOID:429","MESH:D006175","UMLS:C0018414"],"termid":"MONDO:0002946","xrefs":{"Monarch":{"xref_id":"0002946"}}}


id: PBO:0066930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 232","termid":"PBO:0066930"}


id: GO:0030548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is changed.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor regulator activity","termid":"GO:0099602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"acetylcholine receptor regulator activity","termid":"GO:0030548"}


id: PBO:0029398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleoplasm","termid":"PBO:0029398"}


id: PBO:0043703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6A1","termid":"PBO:0043703"}


id: PBO:0110489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA splicing tri-snRNP complex factor PRPF4","termid":"PBO:0110489"}


id: GO:0030956
data:
  {"annotated_genes":["SJAG_02721","SJAG_05560","SJAG_01577"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96156,110739,117830],"is_not":false,"summary":null,"term":"GO:0030956"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses glutamyl-tRNA(Gln) amidotransferase activity, and therefore creates Gln-tRNA by amidating Glu-tRNA; usually composed of 3 subunits: A, B, and C. Note that the C subunit may not be required in all organisms.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01577":null,"SJAG_02721":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutamyl-tRNA(Gln) amidotransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AdT","type":"related"},{"name":"GatCAB","type":"narrow"},{"name":"GatFAB","type":"narrow"}],"termid":"GO:0030956","terms_by_termid":{"GO:0030956":null}}


id: PBO:0043044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and histidine rich domain containing 1","termid":"PBO:0043044"}


id: PBO:0068186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 493","termid":"PBO:0068186"}


id: PBO:0055876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC3B antisense RNA 1","termid":"PBO:0055876"}


id: PBO:0070194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 116 pseudogene","termid":"PBO:0070194"}


id: MONDO:0023679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hematohidrosis is a rare condition characterized by blood oozing from intact skin and mucosa. Signs and symptoms include sweating blood, crying bloody tears, bleeding from the nose, bleeding from the ears, or oozing bloodfrom other skin surfaces. The episodes are usually self-limiting.","definition_xrefs":["GARD:0013131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hematohidrosis","secondary_identifiers":["UMLS:C0473554","ICD9:705.89","MEDGEN:633305","SCTID:238757003","GARD:13131"],"synonyms":[{"name":"Hematidrosis","type":"related"},{"name":"Hematohidrosis","type":"related"}],"termid":"MONDO:0023679","xrefs":{"Monarch":{"xref_id":"0023679"}}}


id: PBO:0087187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit ABC10-beta; common to RNA polymerases I, II, and III","termid":"PBO:0087187"}


id: GO:0002652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction dependent upon immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction dependent upon immune response","synonyms":[{"name":"regulation of immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002652"}


id: MONDO:0017377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preaxial polydactyly-colobomata-intellectual disability syndrome is characterized by growth retardation, intellectual deficit, preaxial polydactyly and colobomatous anomalies. It has been described in one pair of sibs (brother and sister). The mode of transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:2921"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preaxial polydactyly-colobomata-intellectual disability syndrome","secondary_identifiers":["MEDGEN:444110","MESH:C537888","UMLS:C2931655","GARD:4304","SCTID:733088002"],"synonyms":[{"name":"Pfeiffer Mayer syndrome","type":"related"},{"name":"Pfeiffer-Mayer syndrome","type":"exact"},{"name":"short stature intellectual disability type I preaxial polydactyly with colobomatous abnormalities","type":"related"},{"name":"short stature mental retardation type I preaxial polydactyly with colobomatous abnormalities","type":"related"}],"termid":"MONDO:0017377","xrefs":{"Monarch":{"xref_id":"0017377"}}}


id: GO:0048566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive tract development","termid":"GO:0048565"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic digestive tract development","termid":"GO:0048566"}


id: MONDO:0021130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of sphingolipid biosynthetic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"disorder of sphingolipid biosynthesis","synonyms":[{"name":"inborn error of sphingolipid biosynthetic process","type":"exact"},{"name":"inborn sphingolipid biosynthetic process disorder","type":"exact"},{"name":"rare inborn error of sphingolipid biosynthetic process","type":"exact"}],"termid":"MONDO:0021130","xrefs":{"Monarch":{"xref_id":"0021130"}}}


id: PomGeneEx:0000011
data:
  {"annotated_genes":["SJAG_01143","SJAG_00118"],"annotation_feature_type":"gene","cv_annotations":{"qualitative_gene_expression":[{"annotations":[118968,118987],"is_not":false,"summary":null,"term":"PomGeneEx:0000011"}]},"cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is present at a higher level under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased","termid":"PomGeneEx:0000002"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null},"genotype_count":0,"is_obsolete":false,"name":"RNA level increased","references_by_uniquename":{"PMID:25866389":null},"synonyms":[{"name":"RNA expression increased","type":"exact"},{"name":"increased RNA level","type":"exact"}],"termid":"PomGeneEx:0000011","terms_by_termid":{"GO:0000087":null,"PomGeneEx:0000011":null}}


id: PBO:0063967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 1","termid":"PBO:0063967"}


id: GO:0072675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The plasma membrane fusion process that results in fusion of mononuclear osteoclasts to form a multinuclear osteoclast.","definition_xrefs":["CL:0000779","CL:0000092","PMID:12713016","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"},{"relation_name":"part_of","term_name":"multinuclear osteoclast differentiation","termid":"GO:0072674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast fusion","termid":"GO:0072675"}


id: PBO:0039317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALMS1 intronic transcript 1","termid":"PBO:0039317"}


id: PATO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed laterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral orientation","synonyms":[{"name":"laterally directed","type":"exact"}],"termid":"PATO:0002497"}


id: MOD:01642
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine removal","termid":"MOD:01642"}


id: GO:0031317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of two membrane proteins and one extracytoplasmic solute receptor. Such transporters transport a variety of substrates without direct ATP power, instead using energy from ion gradients.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tripartite ATP-independent periplasmic transporter complex","synonyms":[{"name":"TRAP transporter complex","type":"exact"},{"name":"TRAP-T transporter complex","type":"exact"}],"termid":"GO:0031317"}


id: GO:1902249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to IMP, inosine monophosphate.","definition_xrefs":["GOC:TermGenie","PMID:4314233","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"IMP binding","termid":"GO:1902249"}


id: PBO:0064035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 69","termid":"PBO:0064035"}


id: PBO:0084051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for polarity-establishment protein Cdc42p; implicated in control of septin organization, pheromone response, and haploid invasive growth; regulated by Pho85p and Cdc28p; RGA2 has a paralog, RGA1, that arose from the whole genome duplication","termid":"PBO:0084051"}


id: PBO:0075218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snurportin 1","termid":"PBO:0075218"}


id: MONDO:0011551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive dopa-responsive dystonia (DYT5b) is a very rare neurometabolic disorder characterized by a spectrum of symptoms ranging from those seen in dopa-responsive dystonia (DRD) to progressive infantile encephalopathy.","definition_xrefs":["Orphanet:101150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dopa-responsive dystonia","termid":"MONDO:0016812"},{"relation_name":"is_a","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"},{"relation_name":"is_a","term_name":"tyrosine hydroxylase deficiency","termid":"MONDO:0100064"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"TH-deficient dopa-responsive dystonia","secondary_identifiers":["UMLS:C2673535","MEDGEN:382128","NORD:1810","SCTID:715827001","GARD:1902","OMIM:605407"],"synonyms":[{"name":"DOPA responsive dystonia, autosomal recessive","type":"related"},{"name":"DYT5b","type":"exact"},{"name":"Dopa-responsive dystonia, autosomal recessive","type":"exact"},{"name":"Parkinsonism, infantile, autosomal recessive","type":"related"},{"name":"Segawa syndrome, autosomal recessive","type":"related"},{"name":"Segawa syndrome, recessive","type":"exact"},{"name":"Tyrosine Hydroxylase Deficiency","type":"exact"},{"name":"autosomal recessive Segawa syndrome","type":"exact"},{"name":"autosomal recessive dopa-responsive dystonia","type":"exact"},{"name":"dopa-responsive dystonia, autosomal recessive","type":"exact"},{"name":"dystonia, DOPA responsive, autosomal recessive","type":"related"},{"name":"dystonia, Dopa-responsive, autosomal recessive","type":"related"},{"name":"tyrosine hydroxylase-deficient dopa-responsive dystonia","type":"exact"}],"termid":"MONDO:0011551","xrefs":{"Monarch":{"xref_id":"0011551"}}}


id: PBO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate kinase (predicted)","termid":"PBO:0001306"}


id: GO:0075301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a relatively unspecialized cell acquires specialized features of a specific cell type occurring during spore germination, the physiological and developmental changes that occur in a spore following release from dormancy up to the earliest signs of growth.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell differentiation involved in spore germination (obsolete GO:0075301)","termid":"GO:0075301"}


id: FYPO:0007870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the lateral cell cortex is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:34533984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to lateral cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to lateral cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell side, with protein mislocalized to cytoplasm, during vegetative growth","type":"related"},{"name":"abolished protein localization to lateral cell cortex, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortex, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cell cortex abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0007870"}


id: GO:0102447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rhamnetin + S-adenosyl-L-methionine = H+ + rhamnacene + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rhamnetin 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13933"],"termid":"GO:0102447"}


id: GO:0034974
data:
  {"annotated_genes":["SJAG_01495","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87444,109751],"is_not":false,"summary":null,"term":"GO:0034974"}]},"cv_name":"cellular_component","definition":"A protein complex involved that contains proteins known in Schizosaccharomyces as Swi5 monomers and Swi2, and is involved in mating type switching.","definition_xrefs":["PMID:14663140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01495":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Swi5-Swi2 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Swi5 complex","type":"broad"}],"termid":"GO:0034974","terms_by_termid":{"GO:0034974":null}}


id: PBO:0004616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp4 (predicted)","termid":"PBO:0004616"}


id: PBO:0016056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuosine salvage protein","termid":"PBO:0016056"}


id: PBO:0034520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_inositol_phosphate_phosphatase_activity","termid":"PBO:0034520"}


id: PBO:0031296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated,_multiseptate_cell","termid":"PBO:0031296"}


id: GO:0031316
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a nuclear outer membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"nuclear outer membrane","termid":"GO:0005640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of nuclear outer membrane","synonyms":[{"name":"extrinsic to nuclear outer membrane","type":"narrow"}],"termid":"GO:0031316"}


id: MONDO:0012296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lipomyelomeningocele is a rare neural tube closure defect characterized by a subcutaneous lipoma that extends through a defect in the lumbodorsal fascia, vertebral neural arch, and dura. This painless lesion can occur anywhere along the spinal canal but usually is found in the sacral or lumbar region. If left untreated it can cause tethered cord syndrome.","definition_xrefs":["Orphanet:268835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"lipomyelomeningocele","secondary_identifiers":["GARD:10053","icd11.foundation:1919145296","ICD9:214.8","MEDGEN:332109","MESH:C537030","OMIM:609537","UMLS:C1836022","SCTID:104431000119107"],"synonyms":[{"name":"familial lipomyelomeningocele","type":"related"},{"name":"lipomyelomeningocele","type":"exact"}],"termid":"MONDO:0012296","xrefs":{"Monarch":{"xref_id":"0012296"}}}


id: GO:0072104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a glomerular capillary. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis","termid":"GO:0001525"},{"relation_name":"part_of","term_name":"glomerulus vasculature morphogenesis","termid":"GO:0072103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular capillary formation","termid":"GO:0072104"}


id: GO:0052146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis on or near host (obsolete GO:0052146)","termid":"GO:0052146"}


id: PBO:0072819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMD12 antisense RNA 1","termid":"PBO:0072819"}


id: PBO:0048503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 3","termid":"PBO:0048503"}


id: GO:2000854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of corticosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid secretion","termid":"GO:2000851"},{"relation_name":"is_a","term_name":"regulation of corticosterone secretion","termid":"GO:2000852"},{"relation_name":"positively_regulates","term_name":"corticosterone secretion","termid":"GO:0035934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of corticosterone secretion","termid":"GO:2000854"}


id: FYPO:0001339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to starvation for one or more nutrients is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation","termid":"FYPO:0000713"},{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cellular response to starvation during vegetative growth","synonyms":[{"name":"abnormal cellular response to depletion during vegetative growth","type":"exact"},{"name":"abnormal cellular response to deprivation during vegetative growth","type":"exact"},{"name":"abnormal cellular response to starvation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001339"}


id: FYPO:0000456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone acetylation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"},{"relation_name":"is_a","term_name":"abnormal protein acetylation during vegetative growth","termid":"FYPO:0002392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone acetylation during vegetative growth","synonyms":[{"name":"abnormal histone acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000456"}


id: PBO:0042833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 20","termid":"PBO:0042833"}


id: GO:0071058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the tetraspanin CD151.","definition_xrefs":["PMID:11884516","PMID:10811835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha3-beta1 integrin-CD151 complex","synonyms":[{"name":"ITGA3-ITGB1-CD151 complex","type":"narrow"}],"termid":"GO:0071058"}


id: PBO:0045540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase maturation factor 2","termid":"PBO:0045540"}


id: PBO:0064593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member M","termid":"PBO:0064593"}


id: GO:0031720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a haptoglobin, any alpha2 globulin of blood plasma that can combine with free oxyhemoglobin to form a stable complex.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"haptoglobin binding","termid":"GO:0031720"}


id: MONDO:0014819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Robinow syndrome in which the cause of the disease is a mutation in the DVL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Robinow syndrome","termid":"MONDO:0008389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Robinow syndrome 3","secondary_identifiers":["OMIM:616894","DOID:0060767","MEDGEN:907878","UMLS:C4225164","GARD:18549"],"synonyms":[{"name":"DRS3","type":"exact"},{"name":"DVL3 Robinow syndrome","type":"exact"},{"name":"Robinow syndrome caused by mutation in DVL3","type":"exact"},{"name":"Robinow syndrome, autosomal dominant 3","type":"exact"},{"name":"Robinow syndrome, autosomal dominant type 3","type":"exact"},{"name":"autosomal dominant Robinow syndrome type 3","type":"exact"}],"termid":"MONDO:0014819","xrefs":{"Monarch":{"xref_id":"0014819"}}}


id: GO:0019202
data:
  {"annotated_genes":["SJAG_03141","SJAG_00881","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004072"},{"annotations":[90397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004349"},{"annotations":[110122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004413"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group, usually from ATP, to an amino acid substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00881":null,"SJAG_03141":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"amino acid kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019202","terms_by_termid":{"GO:0004072":null,"GO:0004349":null,"GO:0004413":null}}


id: PBO:0053924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1221","termid":"PBO:0053924"}


id: PR:O59793
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bis1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein bis1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.02c","synonyms":[{"name":"Spom972h-bis1","type":"exact"}],"termid":"PR:O59793"}


id: PBO:0073443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor proline and glutamine rich pseudogene 1","termid":"PBO:0073443"}


id: FYPO:0006276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyorrhexis, the nuclear fragmentation typical of cell death by apoptosis, occurs at a greater frequency than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:18653539","PomBase:mah","GO:0097194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased karyorrhexis during stationary phase","synonyms":[{"name":"fragmented nuclear envelope during stationary phase entry","type":"related"},{"name":"increased apoptotic nuclear fragmentation during stationary phase","type":"exact"}],"termid":"FYPO:0006276"}


id: MONDO:0100124
data:
  {"annotated_genes":["SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010671"},{"annotations":[86417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010457"}]},"cv_name":"mondo","definition":"Ab X-linked syndromic intellectual disability in which the cause of the disease is a mutation in the NAA10 gene. Patients with variants in the NAA10 gene demonstrate symptoms such as developmental delay, intellectual disability, autism spectrum disorder, hypotonia, facial dysmorphism, cardiac anomalies, and/or skeletal anomalies.","definition_xrefs":["PMID:31088393","PMID:31174490","PMID:27094817","PMID:23871722","PMID:28967461","PMID:31127942","PMID:25099252","PMID:29748569","PMID:26522270","PMID:29558889","PMID:24431331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04631":null},"genotype_count":0,"is_obsolete":false,"name":"NAA10-related syndrome","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"NAA10 X-linked syndromic intellectual disability","type":"exact"},{"name":"NAA10-related syndrome","type":"exact"},{"name":"X-linked syndromic intellectual disability caused by mutation in NAA10","type":"exact"}],"termid":"MONDO:0100124","terms_by_termid":{"MONDO:0010457":null,"MONDO:0010671":null},"xrefs":{"Monarch":{"xref_id":"0100124"}}}


id: MONDO:0003707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the common bile duct distal to the insertion of the cystic duct.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"distal biliary tract carcinoma","secondary_identifiers":["MEDGEN:232133","UMLS:C1333308","DOID:5923","NCIT:C7109"],"synonyms":[{"name":"carcinoma of distal biliary tract","type":"exact"},{"name":"carcinoma of the distal biliary tract","type":"exact"},{"name":"distal bile duct cancer","type":"exact"},{"name":"distal bile duct carcinoma","type":"exact"},{"name":"distal biliary tract carcinoma","type":"exact"},{"name":"extrahepatic (distal) bile duct cancer","type":"exact"}],"termid":"MONDO:0003707","xrefs":{"Monarch":{"xref_id":"0003707"}}}


id: PBO:0039898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF2 antisense RNA 2","termid":"PBO:0039898"}


id: GO:0019614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound catabolic process","synonyms":[{"name":"catechol breakdown","type":"related"},{"name":"catechol catabolic process","type":"related"},{"name":"catechol catabolism","type":"related"},{"name":"catechol degradation","type":"related"}],"termid":"GO:0019614"}


id: PBO:0044279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 2 pseudogene 1","termid":"PBO:0044279"}


id: PATO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having an open, latticed, or porous structure; used especially of bone.","definition_xrefs":["TheFreeDictionary:cancellous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancellous","termid":"PATO:0002519"}


id: PBO:0000997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP1/OBG family","termid":"PBO:0000997"}


id: PBO:0003608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase (predicted)","termid":"PBO:0003608"}


id: MONDO:0022937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness conductive stapedial ear malformation facial palsy","termid":"MONDO:0022937","xrefs":{"Monarch":{"xref_id":"0022937"}}}


id: PBO:0082755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells","termid":"PBO:0082755"}


id: PBO:0044697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX3 interacting lncRNA 1","termid":"PBO:0044697"}


id: PR:000050537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf3 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been trimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00083.","definition_xrefs":["PRO:DAN","PMID:22150589","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf3 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050528"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf3/Me3:(K20)","pombase_gene_id":"SPBC1105.12","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00083","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf3 gene translation product, initiator methionine removed trimethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf3/InitMet-/Me3:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00083","type":"broad"},{"name":"hhf3/Me3:(K20)","type":"exact"},{"name":"histone H4 K20me3 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf3 K20me3 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050537"}


id: MONDO:0004157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic mucinous cystadenoma (obsolete MONDO:0004157)","termid":"MONDO:0004157","xrefs":{"Monarch":{"xref_id":"0004157"}}}


id: PBO:0064021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 55","termid":"PBO:0064021"}


id: PBO:0056226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member E2","termid":"PBO:0056226"}


id: MONDO:0010907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hypertryptophanemia is characterized by intellectual deficit associated with behavioral problems: periodic mood swings, exaggerated affective responses and abnormal sexual behavior. Twelve cases have been reported so far. Congenital abnormalities in tryptophan metabolism appear to be responsible for the tryptophanemia and tryptophanuria.","definition_xrefs":["Orphanet:2224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of tryptophan metabolism","termid":"MONDO:0017350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"familial hypertryptophanemia","secondary_identifiers":["SCTID:721838005","UMLS:C2931837","OMIM:600627","DOID:0111703","GARD:2871","MEDGEN:419177","MESH:C538393"],"synonyms":[{"name":"HYPTRP","type":"related"},{"name":"familial hypertryptophanemia","type":"exact"},{"name":"hypertryptophanemia","type":"broad"},{"name":"hypertryptophanemia, familial","type":"related"}],"termid":"MONDO:0010907","xrefs":{"Monarch":{"xref_id":"0010907"}}}


id: MONDO:0022755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"monosomy","termid":"MONDO:0020639"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 mosaic monosomy","secondary_identifiers":["MESH:C536581","MEDGEN:419755","UMLS:C2931250"],"synonyms":[{"name":"Mosaic monosomy 18","type":"related"},{"name":"Mosaic monosomy chromosome 18","type":"related"},{"name":"monosomy 18 mosaicism","type":"related"}],"termid":"MONDO:0022755","xrefs":{"Monarch":{"xref_id":"0022755"}}}


id: PBO:0056947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 15a","termid":"PBO:0056947"}


id: PBO:0080955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 10, pseudogene","termid":"PBO:0080955"}


id: GO:0019552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-hydroxyglutarate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P162-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic glutamate catabolic process","termid":"GO:0019670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006091","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glutamate catabolic process via 2-hydroxyglutarate","synonyms":[{"name":"glutamate fermentation via 2-hydroxyglutarate","type":"exact"}],"termid":"GO:0019552"}


id: GO:0045442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + deacetoxycephalosporin C + O2 = CO2 + deacetylcephalosporin C + succinate.","definition_xrefs":["EC:1.14.11.26","RHEA:16805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"deacetoxycephalosporin-C hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.11.26-RXN","KEGG_REACTION:R05229"],"synonyms":[{"name":"3'-methylcephem hydroxylase activity","type":"related"},{"name":"DACS","type":"related"},{"name":"DAOC hydroxylase activity","type":"related"},{"name":"beta-lactam hydroxylase activity","type":"exact"},{"name":"deacetoxycephalosporin C hydroxylase activity","type":"related"},{"name":"deacetoxycephalosporin-C,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"deacetylcephalosporin C synthase activity","type":"related"}],"termid":"GO:0045442"}


id: GO:0120060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any gastric emptying process, the process in which the liquid and liquid-suspended solid contents of the stomach exit through the pylorus into the duodenum.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastric motility","termid":"GO:1905333"},{"relation_name":"regulates","term_name":"gastric emptying","termid":"GO:0035483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gastric emptying","synonyms":[{"name":"regulation of small bowel emptying","type":"exact"},{"name":"regulation of small intestine emptying","type":"exact"}],"termid":"GO:0120060"}


id: GO:0051037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription as part of a meiotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in meiotic cell cycle (obsolete GO:0051037)","synonyms":[{"name":"meiotic regulation of transcription","type":"exact"},{"name":"regulation of transcription, meiotic","type":"exact"}],"termid":"GO:0051037"}


id: PBO:0064722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 58","termid":"PBO:0064722"}


id: MONDO:0002516
data:
  {"annotated_genes":["SJAG_04699","SJAG_02231","SJAG_04394","SJAG_01837","SJAG_02261","SJAG_02049","SJAG_02226","SJAG_02187","SJAG_03453","SJAG_01620","SJAG_01082","SJAG_04206","SJAG_00980","SJAG_02426","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86008,86014,86010,86859,86013,86011,86009,86012,86007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[86575,86576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"},{"annotations":[86169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[85899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[84720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[85170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[85172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[85183,85182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving any part of the digestive system.","definition_xrefs":["NCIT:C4890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02049":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02261":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"digestive system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0751075","DOID:3119","ICD9:239.0","MEDGEN:148231","ICD10CM:C15-C26"],"synonyms":[{"name":"GI tumor","type":"broad"},{"name":"GI tumour","type":"broad"},{"name":"cancer of digestive system","type":"exact"},{"name":"digestive system cancer","type":"exact"},{"name":"gastrointestinal system cancer","type":"exact"},{"name":"gastrointestinal tract cancer","type":"exact"},{"name":"malignant digestive system neoplasm","type":"exact"},{"name":"malignant gastrointestinal neoplasm","type":"exact"},{"name":"malignant gastrointestinal system neoplasm","type":"exact"},{"name":"malignant neoplasm of digestive system","type":"exact"}],"termid":"MONDO:0002516","terms_by_termid":{"MONDO:0001056":null,"MONDO:0005575":null,"MONDO:0007256":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0002516"}}}


id: GO:0031875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 proteinase activated receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase activated receptor binding","termid":"GO:0031871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 4 proteinase activated receptor binding","synonyms":[{"name":"type 4 proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031875"}


id: GO:1904913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of the localization of a protein-containing macromolecular complex to a telomere.","definition_xrefs":["PMID:26586433","GOC:rph","GOC:BHF_telomere","GO_REF:0000058","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"establishment of protein-containing complex localization to telomere","termid":"GO:0097695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein-containing complex localization to telomere","synonyms":[{"name":"regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"regulation of establishment of macromolecular complex localization to telomere","type":"related"}],"termid":"GO:1904913"}


id: PBO:0053899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1187","termid":"PBO:0053899"}


id: MONDO:0018195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-seminomatous germ cell tumor of testis (obsolete MONDO:0018195)","termid":"MONDO:0018195","xrefs":{"Monarch":{"xref_id":"0018195"}}}


id: PBO:0040751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase 2, pseudogene 1","termid":"PBO:0040751"}


id: PBO:0086069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may function in RNA processing; interacts with Pbp1p and Pbp4p and associates with ribosomes; contains an RNA-binding LSM domain and an AD domain; GFP-fusion protein is induced by the DNA-damaging agent MMS; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086069"}


id: GO:0044454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a nuclear chromosome, a chromosome that encodes the nuclear genome and is found in the nucleus of a eukaryotic cell during the cell cycle phases when the nucleus is intact.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear chromosome part (obsolete GO:0044454)","termid":"GO:0044454"}


id: GO:0030834
data:
  {"annotated_genes":["SJAG_00279","SJAG_01993","SJAG_02700","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98399,91834,87772,113761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of actin filaments by the removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin polymerization or depolymerization","termid":"GO:0008064"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of actin filament depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin depolymerization","type":"exact"}],"termid":"GO:0030834","terms_by_termid":{"GO:0051016":null}}


id: PBO:0040851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 5","termid":"PBO:0040851"}


id: PBO:0081454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 321, pseudogene","termid":"PBO:0081454"}


id: MONDO:0004748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the lip.","direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lip disorder","secondary_identifiers":["ICD9:528.5","DOID:9297","MESH:D008047","NCIT:C26818","SCTID:90678009","MEDGEN:44166","UMLS:C0023760"],"synonyms":[{"name":"disease of lip","type":"exact"},{"name":"disease of lips","type":"exact"},{"name":"disease or disorder of lip","type":"exact"},{"name":"disorder of lip","type":"exact"},{"name":"lip disease","type":"exact"},{"name":"lip disease or disorder","type":"exact"},{"name":"lip disorder","type":"exact"}],"termid":"MONDO:0004748","xrefs":{"Monarch":{"xref_id":"0004748"}}}


id: GO:0097455
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Paranodal terminations of Schwann cells that do not directly contact the paranodal axon membrane. Usually found in thicker myelin.","definition_xrefs":["NIF_Subcellular:sao937871668","PMID:15988042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spiny bracelet of Nageotte","termid":"GO:0097455"}


id: GO:2000375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oxygen metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of oxygen metabolic process","termid":"GO:2000374"},{"relation_name":"negatively_regulates","term_name":"oxygen metabolic process","termid":"GO:0072592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxygen metabolic process","synonyms":[{"name":"negative regulation of diatomic oxygen metabolic process","type":"exact"},{"name":"negative regulation of oxygen metabolism","type":"exact"}],"termid":"GO:2000375"}


id: MONDO:0000698
data:
  {"annotated_genes":["SJAG_03434","SJAG_00674","SJAG_03293"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013166"},{"annotations":[84721,84722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010083"}]},"cv_name":"mondo","definition":"An amino acid metabolic disorder characterized by impairment of the GABA catabolic pathway.","definition_xrefs":["DOID:0060176","PMID:12891648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"gamma-amino butyric acid metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842586","UMLS:C4702813","Orphanet:79175","GARD:18955","icd11.foundation:1811657969"],"termid":"MONDO:0000698","terms_by_termid":{"MONDO:0010083":null,"MONDO:0013166":null},"xrefs":{"Monarch":{"xref_id":"0000698"}}}


id: GO:0031255
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile cell perpendicular to the direction of movement.","definition_xrefs":["GOC:pg","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral part of motile cell","termid":"GO:0031255"}


id: GO:0002825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a T-helper 1 type immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"T-helper 1 type immune response","termid":"GO:0042088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"}


id: PBO:0044416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily T member 3, pseudogene","termid":"PBO:0044416"}


id: PBO:0074357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 4","termid":"PBO:0074357"}


id: PBO:0069323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 581, pseudogene","termid":"PBO:0069323"}


id: MONDO:0035689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome of reduced sensitivity to thyroid hormone (obsolete MONDO:0035689)","secondary_identifiers":["Orphanet:596426"],"termid":"MONDO:0035689","xrefs":{"Monarch":{"xref_id":"0035689"}}}


id: GO:0070323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of translation as a result of a stimulus indicating deprivation of nitrogen.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of translation in response to nitrogen starvation (obsolete GO:0070323)","synonyms":[{"name":"activation of translation in response to nitrogen starvation","type":"narrow"},{"name":"stimulation of translation in response to nitrogen starvation","type":"narrow"},{"name":"up regulation of translation in response to nitrogen starvation","type":"exact"},{"name":"up-regulation of translation in response to nitrogen starvation","type":"exact"},{"name":"upregulation of translation in response to nitrogen starvation","type":"exact"}],"termid":"GO:0070323"}


id: PBO:0090018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Lea1","termid":"PBO:0090018"}


id: GO:0047418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a phthalylamide = phthalate + substituted amine.","definition_xrefs":["EC:3.5.1.79","MetaCyc:3.5.1.79-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phthalyl amidase activity","secondary_identifiers":["RHEA:18297"],"synonyms":[{"name":"o-phthalyl amidase activity","type":"narrow"},{"name":"phthalyl-amide amidohydrolase activity","type":"related"}],"termid":"GO:0047418"}


id: PBO:0064767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase H pseudogene 1","termid":"PBO:0064767"}


id: PBO:0082971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; protein overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; potential Cdc28p substrate","termid":"PBO:0082971"}


id: FYPO:0006048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a mitotic spindle assembles, but does not remain at a constant length or gradually elongate.","definition_xrefs":["PMID:23885124","PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000337","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"unstable mitotic spindle","synonyms":[{"name":"unstable mitotic spindle during vegetative growth","type":"exact"},{"name":"unstable mitotic spindle length","type":"exact"},{"name":"unstable spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006048"}


id: MONDO:0012781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 12","secondary_identifiers":["MEDGEN:436989","UMLS:C2677602","OMIM:612010"],"synonyms":[{"name":"CELIAC12","type":"exact"},{"name":"celiac disease, susceptibility to, 12","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 12","type":"related"}],"termid":"MONDO:0012781","xrefs":{"Monarch":{"xref_id":"0012781"}}}


id: PBO:0041392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 63","termid":"PBO:0041392"}


id: MONDO:0017298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute zonal occult outer retinopathy (AZOOR) is a rare condition that affects the eyes. People with this condition may experience a sudden onset of photopsia (the presence of perceived flashes of light) and an area of partial vision loss (a blindspot). Other symptoms may include 'whitening of vision' or blurred vision. Although anyone can be affected, the condition is most commonly diagnosed in young women (average age 36.7 years). The underlying cause of AZOOR is currently unknown; however, some researchers have proposed that infectious agents (such as viruses) or autoimmunity may play a role in the development of the condition. No treatment has been proven to improve the visual outcome of AZOOR; however, systemic corticosteroids are the most commonly used therapy.","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute zonal occult outer retinopathy","secondary_identifiers":["icd11.foundation:2011657601","MEDGEN:196452","MESH:C538223","GARD:8640","Orphanet:284454","ICD9:362.10","UMLS:C0730298","SCTID:312929003"],"synonyms":[{"name":"AZOOR","type":"exact"}],"termid":"MONDO:0017298","xrefs":{"Monarch":{"xref_id":"0017298"}}}


id: PBO:0000769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Methionine","termid":"PBO:0000769"}


id: MONDO:0010890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acro-cardio-facial syndrome (ACFS) is a rare genetic disorder characterized by split-hand/split-foot malformation (SHFM), facial anomalies, cleft lip/palate, congenital heart defect (CHD), genital anomalies, and intellectual deficit.","definition_xrefs":["Orphanet:2008"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrocardiofacial syndrome","secondary_identifiers":["icd11.foundation:976844546","GARD:1167","DOID:0070419","UMLS:C1838121","MEDGEN:324947","MESH:C563936","OMIM:600460"],"synonyms":[{"name":"ACFS","type":"exact"},{"name":"CCGE","type":"related"},{"name":"CCGE syndrome","type":"exact"},{"name":"acrocardiofacial syndrome","type":"exact"},{"name":"cleft palate, CARDIAC defect, genital anomalies, and ectrodactyly","type":"related"},{"name":"cleft palate-cardiac defect-genital anomalies-ectrodactyly syndrome","type":"exact"}],"termid":"MONDO:0010890","xrefs":{"Monarch":{"xref_id":"0010890"}}}


id: GO:0140319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding and sequestering a specific receptor ligand to prevent it from binding to its regular receptor.","definition_xrefs":["Wikipedia:Decoy_receptors"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140313"],"is_obsolete":false,"name":"receptor decoy activity","secondary_identifiers":["GO:0005040"],"synonyms":[{"name":"decoy death receptor activity","type":"narrow"},{"name":"decoy receptor","type":"exact"}],"termid":"GO:0140319"}


id: PBO:0075517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle apparatus coiled-coil protein 1","termid":"PBO:0075517"}


id: MONDO:1010576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, horse","secondary_identifiers":["OMIA:000279-9796"],"termid":"MONDO:1010576","xrefs":{"Monarch":{"xref_id":"1010576"}}}


id: PBO:0060486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox retrogene P8","termid":"PBO:0060486"}


id: GO:0102814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3,3',5-tri-O-beta-D-glucoside betaine + caffeoyl-CoA = delphinidin 3-O-glucosyl-5-O-(caffeoylglucoside-3'-O-glucoside) + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete caffeoyl-CoA:delphinidin-3,5,3'-triglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity (obsolete GO:0102814)","termid":"GO:0102814"}


id: GO:1904561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diphenidol stimulus.","definition_xrefs":["GO_REF:0000071","GOC:mr","GOC:TermGenie","PMID:25796330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to diphenidol","termid":"GO:1904560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diphenidol","termid":"GO:1904561"}


id: GO:0090257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a muscle system process, a multicellular organismal process carried out by any of the organs or tissues in a muscle system.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"muscle system process","termid":"GO:0003012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle system process","termid":"GO:0090257"}


id: PBO:0089706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dom34-Hbs1 translation release factor complex GTPase subunit Hbs1","termid":"PBO:0089706"}


id: MONDO:0017929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital achiasma is a rare, genetic, non-syndromic cranial nerve and nuclear aplasia malformation characterized by the congenital absence of the optic chiasm, resulting from the failure of the optic nerve fibers to cross over and decussate to the contralateral hemisphere, leading to decreased vision, strabismus and congenital nystagmus in infancy.","definition_xrefs":["Orphanet:324353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital achiasma","secondary_identifiers":["MEDGEN:1392790","SCTID:734031008","UMLS:C4518345","GARD:21438","ICD10CM:H47.4"],"termid":"MONDO:0017929","xrefs":{"Monarch":{"xref_id":"0017929"}}}


id: PBO:0072165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 2","termid":"PBO:0072165"}


id: PBO:0111837
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HP1/CBX family","termid":"PBO:0111837"}


id: GO:0002931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a inadequate blood supply.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ischemia","termid":"GO:0002931"}


id: GO:2001045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of integrin-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of integrin-mediated signaling pathway","termid":"GO:2001044"},{"relation_name":"negatively_regulates","term_name":"integrin-mediated signaling pathway","termid":"GO:0007229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of integrin-mediated signaling pathway","synonyms":[{"name":"negative regulation of integrin-mediated signalling pathway","type":"exact"}],"termid":"GO:2001045"}


id: PBO:0017545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium ion transmembrane transporter (predicted)","termid":"PBO:0017545"}


id: PBO:0078063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 53","termid":"PBO:0078063"}


id: GO:0021835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the migration of interneuron precursors up a concentration gradient towards the olfactory bulb.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","GOC:dph","GO_REF:0000021","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"embryonic olfactory bulb interneuron precursor migration","termid":"GO:0021831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction involved in embryonic olfactory bulb interneuron precursor migration","synonyms":[{"name":"positive chemotaxis involved in embryonic olfactory bulb interneuron precursor migration","type":"exact"}],"termid":"GO:0021835"}


id: MONDO:1010091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microtia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia, non-human animal","secondary_identifiers":["OMIA:001952"],"termid":"MONDO:1010091","xrefs":{"Monarch":{"xref_id":"1010091"}}}


id: GO:0051996
data:
  {"annotated_genes":["SJAG_02719"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110762],"is_not":false,"summary":null,"term":"GO:0051996"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 (2E,6E)-farnesyl diphosphate + H+ + NAD(P)H = 2 diphosphate + NAD(P)+ + squalene.","definition_xrefs":["EC:2.5.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02719":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"squalene synthase [NAD(P)H] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN66-281"],"synonyms":[{"name":"farnesyl-diphosphate farnesyltransferase activity","type":"narrow"},{"name":"farnesyltransferase activity","type":"broad"},{"name":"presqualene synthase activity","type":"exact"},{"name":"presqualene-diphosphate synthase activity","type":"exact"},{"name":"squalene synthase activity","type":"exact"},{"name":"squalene synthetase activity","type":"related"}],"termid":"GO:0051996","terms_by_termid":{"GO:0051996":null}}


id: SO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe decrease in cds length that deletes one or more entire codons from the coding sequence but does not change any remaining codons.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_deletion","termid":"SO:0001822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conservative_inframe_deletion","synonyms":[{"name":"conservative decrease in CDS length","type":"related"},{"name":"conservative inframe deletion","type":"exact"}],"termid":"SO:0001825"}


id: FYPO:0004313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CENP-A containing chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to CENP-A containing chromatin","termid":"FYPO:0004311"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to CENP-A containing chromatin","synonyms":[{"name":"decreased protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"decreased protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric core region chromatin","type":"exact"},{"name":"reduced protein localization to CENP-A containing chromatin","type":"exact"}],"termid":"FYPO:0004313"}


id: PBO:0090542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4 kinase plasma membrane scaffold Efr3-like","termid":"PBO:0090542"}


id: PBO:0055573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3009","termid":"PBO:0055573"}


id: PBO:0045246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC25-GNG10 readthrough","termid":"PBO:0045246"}


id: GO:0102686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose(2-) + trans-zeatin = H+ + 9-(alpha-D-glucosyl)-trans-zeatin + UDP(3-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:trans-zeatin 9-N-glucosyltransferase (obsolete GO:0102686)","termid":"GO:0102686"}


id: PBO:0078760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 3","termid":"PBO:0078760"}


id: MONDO:0800359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 64","secondary_identifiers":["MEDGEN:482676","UMLS:C3281046"],"synonyms":[{"name":"RP64","type":"exact"}],"termid":"MONDO:0800359","xrefs":{"Monarch":{"xref_id":"0800359"}}}


id: FYPO:0005335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through mitotic cell cycle arrest at the mitotic G2/M phase transition occurs abnormally when the cell is subject to glucose starvation.","definition_xrefs":["PMID:26804466","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose starvation","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose deprivation","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose limitation","type":"related"},{"name":"abnormal cell cycle arrest in mitotic G2 phase during glucose depletion","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition during glucose starvation","type":"exact"},{"name":"abolished mitotic G2/M phase transition during glucose starvation","type":"related"}],"termid":"FYPO:0005335"}


id: MONDO:0041114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficient blood distribution to the limbs caused by narrowing or obstruction of the lumen of the peripheral arteries.","definition_xrefs":["MEDGEN:115991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ischemic disease","termid":"MONDO:0005053"},{"relation_name":"is_a","term_name":"peripheral arterial disease","termid":"MONDO:0005386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral ischemia","secondary_identifiers":["SCTID:233958001","UMLS:C0235490"],"synonyms":[{"name":"peripheral ischaemic vascular disease","type":"related"},{"name":"peripheral ischemia","type":"exact"},{"name":"peripheral ischemic vascular disease","type":"related"}],"termid":"MONDO:0041114","xrefs":{"Monarch":{"xref_id":"0041114"}}}


id: GO:0042131
data:
  {"annotated_genes":["SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109906,109907],"is_not":false,"summary":null,"term":"GO:0042131"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine phosphate + H2O = thiamine + phosphate.","definition_xrefs":["PMID:197075","RHEA:47948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"thiamine phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.3.100"],"synonyms":[{"name":"ThMPase","type":"exact"},{"name":"thiamin monophosphate phosphatase","type":"exact"},{"name":"thiamin phosphate phosphatase activity","type":"exact"}],"termid":"GO:0042131","terms_by_termid":{"GO:0042131":null}}


id: PBO:0077002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 4","termid":"PBO:0077002"}


id: GO:0015411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of taurine from one side of a membrane to the other according to the reaction: ATP + H2O + taurine(out) = ADP + phosphate + taurine(in).","definition_xrefs":["RHEA:14613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taurine transmembrane transporter activity","termid":"GO:0005368"},{"relation_name":"is_a","term_name":"ABC-type alkanesulfonate transporter transporter activity","termid":"GO:0042959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type taurine transporter transporter activity","secondary_identifiers":["MetaCyc:ABC-64-RXN","EC:7.6.2.7"],"synonyms":[{"name":"ATP-dependent taurine transporter activity","type":"related"},{"name":"ATPase-coupled taurine transporter activity","type":"related"},{"name":"taurine ABC transporter","type":"exact"},{"name":"taurine-transporting ATPase activity","type":"related"}],"termid":"GO:0015411"}


id: GO:1900717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of violaceol II biosynthetic process","termid":"GO:1900716"},{"relation_name":"negatively_regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of violaceol II biosynthetic process","synonyms":[{"name":"down regulation of violaceol II anabolism","type":"exact"},{"name":"down regulation of violaceol II biosynthesis","type":"exact"},{"name":"down regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down regulation of violaceol II formation","type":"exact"},{"name":"down regulation of violaceol II synthesis","type":"exact"},{"name":"down-regulation of violaceol II anabolism","type":"exact"},{"name":"down-regulation of violaceol II biosynthesis","type":"exact"},{"name":"down-regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down-regulation of violaceol II formation","type":"exact"},{"name":"down-regulation of violaceol II synthesis","type":"exact"},{"name":"downregulation of violaceol II anabolism","type":"exact"},{"name":"downregulation of violaceol II biosynthesis","type":"exact"},{"name":"downregulation of violaceol II biosynthetic process","type":"exact"},{"name":"downregulation of violaceol II formation","type":"exact"},{"name":"downregulation of violaceol II synthesis","type":"exact"},{"name":"inhibition of violaceol II anabolism","type":"exact"},{"name":"inhibition of violaceol II biosynthesis","type":"exact"},{"name":"inhibition of violaceol II biosynthetic process","type":"narrow"},{"name":"inhibition of violaceol II formation","type":"exact"},{"name":"inhibition of violaceol II synthesis","type":"exact"},{"name":"negative regulation of violaceol II anabolism","type":"exact"},{"name":"negative regulation of violaceol II biosynthesis","type":"exact"},{"name":"negative regulation of violaceol II formation","type":"exact"},{"name":"negative regulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900717"}


id: GO:0007617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes.","definition_xrefs":["GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive behavior","termid":"GO:0019098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating behavior","secondary_identifiers":["Wikipedia:Mating_behaviour"],"synonyms":[{"name":"mating behaviour","type":"exact"}],"termid":"GO:0007617"}


id: PBO:0078721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAG) 1-1","termid":"PBO:0078721"}


id: MOD:00125
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to hypusine, N6-(4-amino-2-hydroxybutyl)-L-lysine.","definition_xrefs":["PubMed:8108861","Unimod:379#K","PubMed:6806267","DeltaMass:0","RESID:AA0116"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-deoxyhypusine","termid":"MOD:01880"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"4-aminobutylated residue","termid":"MOD:01884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypusine","synonyms":[{"name":"(2S)-2-amino-6-([(2R)-4-amino-2-hydroxybutyl]amino)hexanoic acid","type":"exact"},{"name":"(2S,9R)-2,11-diazanyl-9-hydroxy-7-azaundecanoic acid","type":"exact"},{"name":"(2S,9R)-hypusine","type":"exact"},{"name":"2-azanyl-6-[(4-azanyl-2-hydroxybutyl)azanyl]hexanoic acid","type":"exact"},{"name":"Hypu","type":"exact"},{"name":"Hypusine","type":"related"},{"name":"L-hypusine","type":"exact"},{"name":"MOD_RES Hypusine","type":"exact"},{"name":"N-(4-NH2-2-OH-butyl)- (of Lysine)","type":"exact"},{"name":"N6-(4-amino-2-hydroxybutyl)-L-lysine","type":"exact"},{"name":"hypusine","type":"related"}],"termid":"MOD:00125"}


id: PR:O13741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 34 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24011:SF57","OMA:SCHPO01463","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.06c","secondary_identifiers":["UniProtKB:O13741"],"synonyms":[{"name":"Spom972h-RBM34","type":"exact"}],"termid":"PR:O13741"}


id: PBO:0036014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0036014"}


id: PBO:0049469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF inducible zinc finger protein 1","termid":"PBO:0049469"}


id: GO:0007556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"part_of","term_name":"instar larval or pupal development","termid":"GO:0002165"},{"relation_name":"regulates","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of juvenile hormone metabolic process","synonyms":[{"name":"regulation of juvenile hormone metabolism","type":"exact"}],"termid":"GO:0007556"}


id: PBO:0086696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localized to the membranes; gene expression regulated by copper levels","termid":"PBO:0086696"}


id: MONDO:0008238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase, acid, of tissues","secondary_identifiers":["MEDGEN:361808","OMIM:171660","UMLS:C1876163"],"synonyms":[{"name":"Acp3--Alpha polypeptide","type":"related"},{"name":"lysosomal acid phosphatase","type":"related"},{"name":"phosphatase, acid, of tissues","type":"exact"}],"termid":"MONDO:0008238","xrefs":{"Monarch":{"xref_id":"0008238"}}}


id: PATO:0001665
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being located near a surface.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superficial","secondary_identifiers":["PATO:0001471"],"synonyms":[{"name":"superficial to","type":"exact"}],"termid":"PATO:0001665"}


id: PBO:0082752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat; required for cargo selection during vesicle formation in ER to Golgi transport; homologous to Sfb3p; SFB2 has a paralog, SEC24, that arose from the whole genome duplication","termid":"PBO:0082752"}


id: GO:0005894
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-3; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-3 receptor, whereas the beta chain is shared with the receptors for granulocyte-macrophage colony-stimulating factor and interleukin-5.","definition_xrefs":["PMID:11839579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"interleukin-3 receptor complex","synonyms":[{"name":"IL-3 receptor complex","type":"exact"}],"termid":"GO:0005894"}


id: PBO:0063407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 3","termid":"PBO:0063407"}


id: GO:1902674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a right posteriolateral flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["ISBN:9780124260207","GOC:TermGenie","PMID:5961344","PMID:16607022","GO_REF:0000064","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"right posteriolateral flagellum","termid":"GO:0097557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"right posteriolateral basal body","synonyms":[{"name":"cilial basal body of right posteriolateral cilium","type":"exact"},{"name":"cilial basal body of right posteriolateral flagellum","type":"exact"},{"name":"cilial basal body of right posterolateral cilium","type":"exact"},{"name":"cilial basal body of right posterolateral flagellum","type":"exact"},{"name":"ciliary basal body of right posteriolateral cilium","type":"exact"},{"name":"ciliary basal body of right posteriolateral flagellum","type":"exact"},{"name":"ciliary basal body of right posterolateral cilium","type":"exact"},{"name":"ciliary basal body of right posterolateral flagellum","type":"exact"},{"name":"cilium basal body of right posteriolateral cilium","type":"exact"},{"name":"cilium basal body of right posteriolateral flagellum","type":"exact"},{"name":"cilium basal body of right posterolateral cilium","type":"exact"},{"name":"cilium basal body of right posterolateral flagellum","type":"exact"},{"name":"microtubule basal body of right posteriolateral cilium","type":"exact"},{"name":"microtubule basal body of right posteriolateral flagellum","type":"exact"},{"name":"microtubule basal body of right posterolateral cilium","type":"exact"},{"name":"microtubule basal body of right posterolateral flagellum","type":"exact"},{"name":"right posteriolateral flagellum ciliary basal body","type":"exact"}],"termid":"GO:1902674"}


id: GO:0050323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + H2O + taurine = AH(2) + NH4 + sulfoacetaldehyde.","definition_xrefs":["PMID:15073291","RHEA:18709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"taurine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07167","MetaCyc:TAURINE-DEHYDROGENASE-RXN","EC:1.4.99.2"],"synonyms":[{"name":"taurine:(acceptor) oxidoreductase (deaminating)","type":"related"},{"name":"taurine:acceptor oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0050323"}


id: MONDO:0800402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the TRPM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"TRPM1-related retinopathy","termid":"MONDO:0800402","xrefs":{"Monarch":{"xref_id":"0800402"}}}


id: PBO:0077463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM184C pseudogene 1","termid":"PBO:0077463"}


id: PBO:0075356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 4","termid":"PBO:0075356"}


id: PBO:0080606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 43","termid":"PBO:0080606"}


id: MONDO:0033549
data:
  {"annotated_genes":["SJAG_01179"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84917],"is_not":false,"summary":null,"term":"MONDO:0033549"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618977","GARD:16399","MEDGEN:1720703","UMLS:C5436534","DOID:0080840"],"synonyms":[{"name":"OPA12","type":"related"},{"name":"OPTIC ATROPHY 12","type":"related"}],"termid":"MONDO:0033549","terms_by_termid":{"MONDO:0033549":null},"xrefs":{"Monarch":{"xref_id":"0033549"}}}


id: GO:0006761
data:
  {"annotated_genes":["SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67877],"is_not":false,"summary":null,"term":"GO:0006761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dihydrofolate, the dihydroxylated derivative of folate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"dihydrofolate metabolic process","termid":"GO:0046452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00529":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0042559","GO:0008150"],"is_obsolete":false,"name":"dihydrofolate biosynthetic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"7,8-dihydrofolate biosynthesis","type":"exact"},{"name":"7,8-dihydrofolate biosynthetic process","type":"exact"},{"name":"dihydrofolate anabolism","type":"exact"},{"name":"dihydrofolate biosynthesis","type":"exact"},{"name":"dihydrofolate formation","type":"exact"},{"name":"dihydrofolate synthesis","type":"exact"}],"termid":"GO:0006761","terms_by_termid":{"GO:0006761":null}}


id: PBO:0049000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC6 antisense RNA 2","termid":"PBO:0049000"}


id: PBO:0065413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 2","termid":"PBO:0065413"}


id: GO:0009916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidation of ubiquinol by diverting electrons from the standard electron transfer chain, transferring them from ubiquinol to oxygen and generating water as the product.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alternative oxidase activity","termid":"GO:0009916"}


id: PATO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of unique homologous chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Monoploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoploid","termid":"PATO:0001376"}


id: MONDO:0015416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tessier number 5 facial cleft","secondary_identifiers":["icd11.foundation:2138256187","Orphanet:141261","GARD:19968","MEDGEN:609364","UMLS:C0432119"],"termid":"MONDO:0015416","xrefs":{"Monarch":{"xref_id":"0015416"}}}


id: GO:0047948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + glutarate = ADP + glutaryl-CoA + H+ + phosphate.","definition_xrefs":["EC:6.2.1.6","RHEA:14169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutarate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R02402","MetaCyc:GLUTARATE--COA-LIGASE-RXN"],"synonyms":[{"name":"glutarate:CoA ligase (ADP-forming)","type":"related"},{"name":"glutaryl coenzyme A synthetase activity","type":"related"},{"name":"glutaryl-CoA synthetase activity","type":"related"}],"termid":"GO:0047948"}


id: GO:1903524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood circulation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mr","PMID:10659969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"positively_regulates","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood circulation","synonyms":[{"name":"activation of blood circulation","type":"narrow"},{"name":"activation of hemolymph circulation","type":"related"},{"name":"positive regulation of hemolymph circulation","type":"related"},{"name":"up regulation of blood circulation","type":"exact"},{"name":"up regulation of hemolymph circulation","type":"related"},{"name":"up-regulation of blood circulation","type":"exact"},{"name":"up-regulation of hemolymph circulation","type":"related"},{"name":"upregulation of blood circulation","type":"exact"},{"name":"upregulation of hemolymph circulation","type":"related"}],"termid":"GO:1903524"}


id: GO:0007161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules that do not require the presence of calcium for the interaction.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"calcium-independent cell-matrix adhesion","synonyms":[{"name":"calcium-independent cell adhesion molecule activity","type":"related"}],"termid":"GO:0007161"}


id: GO:0008291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["ISBN:0192800752","GOC:jl","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylcholine metabolic process","synonyms":[{"name":"acetylcholine metabolism","type":"exact"}],"termid":"GO:0008291"}


id: PBO:0051419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-18","termid":"PBO:0051419"}


id: PR:O74447
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16C4.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.02c","synonyms":[{"name":"Spom972h-SPCC16C4.02c","type":"exact"}],"termid":"PR:O74447"}


id: MONDO:0002555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma that involves the trigeminal nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal nerve neoplasm","termid":"MONDO:0001420"},{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigeminal schwannoma","secondary_identifiers":["UMLS:C0349582","SCTID:277185000","DOID:3202","MEDGEN:83890","NCIT:C4655","ICD9:215.9"],"synonyms":[{"name":"fifth cranial nerve neurilemmoma","type":"exact"},{"name":"fifth cranial nerve schwannoma","type":"exact"},{"name":"neurilemmoma of fifth cranial nerve","type":"exact"},{"name":"neurilemmoma of the fifth cranial nerve","type":"exact"},{"name":"neurilemmoma of the trigeminal nerve","type":"exact"},{"name":"neurilemmoma of trigeminal nerve","type":"exact"},{"name":"schwannoma of fifth cranial nerve","type":"exact"},{"name":"schwannoma of the fifth cranial nerve","type":"exact"},{"name":"schwannoma of the trigeminal nerve","type":"exact"},{"name":"schwannoma of trigeminal nerve","type":"exact"},{"name":"trigeminal nerve schwannoma","type":"exact"},{"name":"trigeminal neurilemmoma","type":"exact"},{"name":"trigeminal schwannoma","type":"exact"}],"termid":"MONDO:0002555","xrefs":{"Monarch":{"xref_id":"0002555"}}}


id: MONDO:0017632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of liver and intrahepatic bile duct neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of liver and intrahepatic biliary tract (obsolete MONDO:0017632)","secondary_identifiers":["Orphanet:306636"],"synonyms":[{"name":"rare liver and intrahepatic bile duct neoplasm","type":"exact"},{"name":"rare tumor of liver and IBT","type":"exact"}],"termid":"MONDO:0017632","xrefs":{"Monarch":{"xref_id":"0017632"}}}


id: PBO:0027243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polyadenylated_5S_rRNA_level","termid":"PBO:0027243"}


id: PBO:0013792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRC1-L/borderline left","termid":"PBO:0013792"}


id: PBO:0054517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1917","termid":"PBO:0054517"}


id: FYPO:0006624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in the plasma membrane is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"},{"relation_name":"is_a","term_name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level","termid":"FYPO:0006488"},{"relation_name":"is_a","term_name":"altered level of substance in plasma membrane","termid":"FYPO:0008331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane","synonyms":[{"name":"increased 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level in plasma membrane","type":"exact"},{"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in cell membrane","type":"exact"},{"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"increased plasma membrane PI(3,4,5)P3 level","type":"exact"},{"name":"increased plasma membrane phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006624"}


id: GO:1903148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any uracil transmembrane transporter activity that is involved in uracil import into cell.","definition_xrefs":["GOC:dos","GO_REF:0000061","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil transmembrane transporter activity involved in uracil import into cell (obsolete GO:1903148)","synonyms":[{"name":"uracil transmembrane transporter activity involved in uracil import into cell","type":"exact"},{"name":"uracil/uridine permease activity involved in uracil import into cell","type":"related"}],"termid":"GO:1903148"}


id: PATO:0000467
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's existence.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amount","termid":"PATO:0000070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"present","synonyms":[{"name":"present in organism","type":"related"}],"termid":"PATO:0000467"}


id: PBO:0086199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated","termid":"PBO:0086199"}


id: PBO:0077787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase III alpha","termid":"PBO:0077787"}


id: FYECO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing raffinose as the carbon source, yeast extract and other components. The concentration of sucrose is typically around 2%.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrose YE","synonyms":[{"name":"sucrose rich medium","type":"broad"}],"termid":"FYECO:0000144"}


id: GO:0031995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to insulin-like growth factor II.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin-like growth factor binding","termid":"GO:0005520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"insulin-like growth factor II binding","synonyms":[{"name":"IGF-II binding","type":"exact"}],"termid":"GO:0031995"}


id: PBO:0043742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2 like","termid":"PBO:0043742"}


id: GO:0002865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an acute inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of acute inflammatory response","termid":"GO:0002674"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response to antigenic stimulus","termid":"GO:0002862"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"},{"relation_name":"negatively_regulates","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acute inflammatory response to antigenic stimulus","synonyms":[{"name":"down regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"down-regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"downregulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"inhibition of acute inflammatory response to antigenic stimulus","type":"narrow"}],"termid":"GO:0002865"}


id: GO:0061227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the mesonephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in mesonephros development","synonyms":[{"name":"mesonephros pattern formation","type":"related"},{"name":"mesonephros pattern specification","type":"exact"}],"termid":"GO:0061227"}


id: GO:0039644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces a host NF-kappaB cascade.","definition_xrefs":["PMID:25275128","PMID:10920188"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host NF-kappaB cascade (obsolete GO:0039644)","synonyms":[{"name":"inhibition of host NF-kappa-B by virus","type":"exact"},{"name":"suppression by virus of host NF-kappaB transcription factor activity","type":"related"}],"termid":"GO:0039644"}


id: PR:O74907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BRCA2 and CDKN1A-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04180","PANTHER:PTHR13261:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bcp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.08","secondary_identifiers":["UniProtKB:O74907"],"synonyms":[{"name":"Spom972h-BCCIP","type":"exact"}],"termid":"PR:O74907"}


id: PR:O14077
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An insulin-degrading enzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01213","PRO:DNx","PANTHER:PTHR11851:SF64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc protease mug138 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.12c","secondary_identifiers":["UniProtKB:O14077"],"synonyms":[{"name":"Spom972h-IDE","type":"exact"},{"name":"meiotically up-regulated gene 138 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14077"}


id: PBO:0018268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med14","termid":"PBO:0018268"}


id: PBO:0004163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Mak5 (predicted)","termid":"PBO:0004163"}


id: MONDO:0032839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"noonan syndrome 12","secondary_identifiers":["NCIT:C177120","GARD:16369","OMIM:618624","DOID:0112170","MEDGEN:1684730","UMLS:C5231432"],"synonyms":[{"name":"NOONAN SYNDROME 12","type":"related"},{"name":"NS12","type":"related"}],"termid":"MONDO:0032839","xrefs":{"Monarch":{"xref_id":"0032839"}}}


id: GO:0002491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.","definition_xrefs":["PMID:15531770","PMID:16181338","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen","termid":"GO:0002483"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class II","synonyms":[{"name":"endogenous peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002491"}


id: GO:0106126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a reservosome.","definition_xrefs":["PMID:22425988","GOC:ach","PMID:21818313","PMID:15521631","PMID:18452191","PMID:19288526","PMID:12204365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"reservosome","termid":"GO:0106123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"reservosome membrane","termid":"GO:0106126"}


id: PBO:0081492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 385D","termid":"PBO:0081492"}


id: PBO:0059285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42","termid":"PBO:0059285"}


id: GO:0051472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"glucosylglycerol metabolic process","synonyms":[{"name":"glucosylglycerol metabolism","type":"exact"}],"termid":"GO:0051472"}


id: GO:0030351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,3,4,5,6-pentakisphosphate + H2O = inositol-1,4,5,6-tetrakisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol pentakisphosphate phosphatase activity","termid":"GO:0052827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol-1,3,4,5,6-pentakisphosphate 3-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855163"],"termid":"GO:0030351"}


id: PBO:0004926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetra spanning protein 1, Tts1","termid":"PBO:0004926"}


id: PBO:0068499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 84, pseudogene","termid":"PBO:0068499"}


id: PBO:0063554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally expressed 10","termid":"PBO:0063554"}


id: PBO:0069860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1147, pseudogene","termid":"PBO:0069860"}


id: PBO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates cfh4","termid":"PBO:0001960"}


id: FYPO:0003625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the microtubule cytoskeleton is abnormal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal microtubule cytoskeleton morphology during mitotic interphase during vegetative growth","type":"related"}],"termid":"FYPO:0003625"}


id: GO:0030979
data:
  {"annotated_genes":["SJAG_02916","SJAG_04236","SJAG_04184","SJAG_00424","SJAG_00610","SJAG_04666","SJAG_02278","SJAG_01028","SJAG_03057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113821],"is_not":false,"summary":null,"term":"GO:0030979"},{"annotations":[117230,108533,88658,113822,103655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[94441,88952,102335,91935],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-glucans, compounds composed of glucose residues linked by alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glucan anabolism","type":"exact"},{"name":"alpha-glucan biosynthesis","type":"exact"},{"name":"alpha-glucan formation","type":"exact"},{"name":"alpha-glucan synthesis","type":"exact"}],"termid":"GO:0030979","terms_by_termid":{"GO:0030979":null,"GO:0070600":null,"GO:0070610":null}}


id: PBO:0042495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 15","termid":"PBO:0042495"}


id: FYPO:0001826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sodium export","termid":"FYPO:0001721"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished sodium export","synonyms":[{"name":"abolished sodium export during mitotic cell cycle","type":"related"},{"name":"abolished sodium export from cell","type":"exact"},{"name":"abolished sodium ion export","type":"exact"},{"name":"sodium export abolished","type":"exact"},{"name":"sodium export abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001826"}


id: FYPO:0004370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of cadmium ions into the vacuole occurs to a lower extent than normal.","definition_xrefs":["GO:0036249","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cadmium ion import into vacuole","synonyms":[{"name":"decreased cadmium import into vacuole","type":"exact"},{"name":"decreased cadmium ion import into vacuole during mitotic cell cycle","type":"related"},{"name":"decreased cadmium ion import into vacuole during vegetative growth","type":"exact"},{"name":"reduced cadmium ion import into vacuole","type":"exact"}],"termid":"FYPO:0004370"}


id: MONDO:0010338
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85805],"is_not":false,"summary":null,"term":"MONDO:0010338"}]},"cv_name":"mondo","definition":"X-linked distal spinal muscular atrophy type 3 is a rare distal hereditary motor neuropathy characterized by slowly progressive atrophy and weakness of distal muscles of hands and feet with normal deep tendon reflexes or absent ankle reflexes and minimal or no sensory loss, sometimes mild proximal weakness in the legs and feet and hand deformities in males.","definition_xrefs":["Orphanet:139557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy","termid":"MONDO:0018894"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"X-linked distal spinal muscular atrophy type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:335168","OMIM:300489","SCTID:766764008","DOID:0111196","MESH:C564506","UMLS:C1845359","GARD:16957"],"synonyms":[{"name":"ATP7A spinal muscular atrophy","type":"exact"},{"name":"ATP7A-related distal motor neuropathy","type":"exact"},{"name":"DSMAX","type":"exact"},{"name":"Dsmax","type":"related"},{"name":"SMAX3","type":"exact"},{"name":"X-linked dHMN type 3","type":"exact"},{"name":"X-linked dHMN3","type":"exact"},{"name":"X-linked dSMA type 3","type":"exact"},{"name":"X-linked dSMA3","type":"exact"},{"name":"X-linked distal hereditary motor neuropathy type 3","type":"exact"},{"name":"spinal muscular atrophy caused by mutation in ATP7A","type":"exact"},{"name":"spinal muscular atrophy, distal, X-linked 3","type":"related"},{"name":"spinal muscular atrophy, distal, X-linked 3, X-linked recessive","type":"exact"},{"name":"spinal muscular atrophy, distal, X-linked recessive","type":"related"},{"name":"spinal muscular atrophy, distal, X-linked type 3","type":"exact"}],"termid":"MONDO:0010338","terms_by_termid":{"MONDO:0010338":null},"xrefs":{"Monarch":{"xref_id":"0010338"}}}


id: MONDO:0013588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Perrault syndrome in which the cause of the disease is a mutation in the CLPP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Perrault syndrome","termid":"MONDO:0017312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005047","MONDO:0005066","MONDO:0006025","MONDO:0004069"],"is_obsolete":false,"name":"Perrault syndrome 3","secondary_identifiers":["UMLS:C3808414","MEDGEN:814744","GARD:15760","OMIM:614129"],"synonyms":[{"name":"CLPP Perrault syndrome","type":"exact"},{"name":"PRLTS3","type":"related"},{"name":"Perrault syndrome 3","type":"exact"},{"name":"Perrault syndrome caused by mutation in CLPP","type":"exact"},{"name":"Perrault syndrome type 3","type":"exact"},{"name":"deafness, autosomal recessive 81","type":"related"},{"name":"deafness, autosomal recessive 81, formerly","type":"related"}],"termid":"MONDO:0013588","xrefs":{"Monarch":{"xref_id":"0013588"}}}


id: GO:0106032
data:
  {"annotated_genes":["SJAG_04754","SJAG_03572","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94860,105701,113740],"is_not":false,"summary":null,"term":"GO:0106032"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine in snRNA = pseudouridine in snRNA. Conversion of uridine in an snRNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["RHEA:51124","PMID:28432181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthase activity","termid":"GO:0009982"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_03572":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016853","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"snRNA pseudouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106032","terms_by_termid":{"GO:0106032":null}}


id: MONDO:0009119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diverticulosis, small-intestinal","secondary_identifiers":["MESH:C565620","MEDGEN:341730","OMIM:223320","UMLS:C1857228"],"synonyms":[{"name":"diverticulosis, small-intestinal","type":"exact"}],"termid":"MONDO:0009119","xrefs":{"Monarch":{"xref_id":"0009119"}}}


id: GO:0043366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which successful recombination of a T cell receptor beta chain into a translatable protein coding sequence leads to rescue from apoptosis and subsequent proliferation of an immature T cell.","definition_xrefs":["ISBN:0781735149","PMID:12220932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"},{"relation_name":"part_of","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta selection","termid":"GO:0043366"}


id: MONDO:0007404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monosomy 5p, also known as Cri du chat syndrome, is a rare autosomal deletion syndrome characterized by a mewing cry (cri du chat) in infancy, multiple congenital anomalies, intellectual disability, microcephaly, and facial dysmorphism.","definition_xrefs":["Orphanet:281"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 5","termid":"MONDO:0016887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cri-du-chat syndrome","secondary_identifiers":["DOID:12580","icd11.foundation:620584190","NCIT:C34518","ICD9:758.31","MedDRA:10011385","MEDGEN:41345","DECIPHER:2","NANDO:2200961","UMLS:C0010314","NORD:1015","OMIM:123450","SCTID:70173007","NANDO:1200684","GARD:6213","MESH:D003410","ICD9:758.39"],"synonyms":[{"name":"5p deletion syndrome","type":"exact"},{"name":"5p minus syndrome","type":"related"},{"name":"5p partial monosomy syndrome","type":"exact"},{"name":"5p- syndrome","type":"related"},{"name":"Cat Cry syndrome","type":"related"},{"name":"Cat-Cry syndrome","type":"exact"},{"name":"Cri du Chat Syndrome","type":"exact"},{"name":"Cri du chat syndrome","type":"exact"},{"name":"Cri-du-chat syndrome","type":"exact"},{"name":"chromosome 5 short arm deletion syndrome","type":"exact"},{"name":"chromosome 5P deletion syndrome","type":"related"},{"name":"chromosome 5p deletion syndrome","type":"exact"},{"name":"chromosome 5p- syndrome","type":"related"},{"name":"deletion 5p","type":"exact"},{"name":"monosomy 5p","type":"related"},{"name":"monosomy type 5p","type":"exact"}],"termid":"MONDO:0007404","xrefs":{"Monarch":{"xref_id":"0007404"}}}


id: PR:O94280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 47 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03333","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0674 endoplasmic reticulum membrane protein C2G5.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.01","secondary_identifiers":["UniProtKB:O94280"],"synonyms":[{"name":"Spom972h-CCDC47","type":"exact"}],"termid":"PR:O94280"}


id: GO:0005964
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the phosphorylation of phosphorylase b to form phosphorylase a.","definition_xrefs":["PMID:1370475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"phosphorylase kinase complex","termid":"GO:0005964"}


id: PBO:0058628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6760","termid":"PBO:0058628"}


id: PBO:0031106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ionizing_radiation_during_vegetative_growth","termid":"PBO:0031106"}


id: PBO:0087590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; mutation is functionally complemented by human ARPC4","termid":"PBO:0087590"}


id: PBO:0054413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1809","termid":"PBO:0054413"}


id: PBO:0013118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Spf38","termid":"PBO:0013118"}


id: PBO:0087446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit I of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; one of three mitochondrially-encoded subunits; number of introns in different strains varies from 2 to 8, with most strains having 4-6 introns","termid":"PBO:0087446"}


id: FYPO:0005291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to zinc ion","synonyms":[{"name":"increased RNA accumulation during cellular response to zinc ion","type":"related"},{"name":"increased RNA level during cellular response to excess zinc ions","type":"narrow"},{"name":"increased RNA level during cellular response to zinc","type":"exact"},{"name":"increased RNA level during cellular response to zinc ion during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to zinc ion during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to zinc ion","type":"narrow"},{"name":"increased transcript level during cellular response to zinc ion","type":"exact"}],"termid":"FYPO:0005291"}


id: GO:1990910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension combined with low atmospheric pressure. Hypoxia is defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95% and hypobaric is defined as atmospheric pressure below 0.74 atm (greater than 2,500 m above sea level).","definition_xrefs":["PMID:24590457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hypoxia","termid":"GO:0001666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hypobaric hypoxia","termid":"GO:1990910"}


id: PBO:0031272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_increased_during_vegetative_growth","termid":"PBO:0031272"}


id: GO:0019476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-lysine, the D-enantiomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine catabolic process","termid":"GO:0006554"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-lysine metabolic process","termid":"GO:0046441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"D-lysine catabolic process","synonyms":[{"name":"D-lysine breakdown","type":"exact"},{"name":"D-lysine catabolism","type":"exact"},{"name":"D-lysine degradation","type":"exact"}],"termid":"GO:0019476"}


id: PBO:0062195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily S member 1","termid":"PBO:0062195"}


id: FYPO:0006089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione hydrolase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal glutathione hydrolase activity","termid":"FYPO:0006089"}


id: PBO:0084841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL34 and YmL38) on two-dimensional SDS gels; protein abundance increases in response to DNA replication stress","termid":"PBO:0084841"}


id: GO:0034413
data:
  {"annotated_genes":["SJAG_04771","SJAG_04666","SJAG_03587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93969],"is_not":false,"summary":null,"term":"GO:0034413"},{"annotations":[91929,87036],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascospore wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0034409"},{"relation_name":"is_a","term_name":"ascospore wall beta-glucan biosynthetic process","termid":"GO:0034412"},{"relation_name":"is_a","term_name":"fungal-type cell wall (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0071970"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0030437","GO:0008150","GO:0005975","GO:0044085","GO:0007049","GO:0071554"],"is_obsolete":false,"name":"ascospore wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall 1,3-beta-D-glucan biosynthetic process","type":"broad"},{"name":"ascospore wall 1,3-beta-glucan anabolism","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan biosynthetic process","type":"broad"},{"name":"ascospore wall 1,3-beta-glucan formation","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan synthesis","type":"exact"},{"name":"ascospore wall beta-1,3-glucan anabolism","type":"exact"},{"name":"ascospore wall beta-1,3-glucan biosynthesis","type":"exact"},{"name":"ascospore wall beta-1,3-glucan biosynthetic process","type":"exact"},{"name":"ascospore wall beta-1,3-glucan formation","type":"exact"},{"name":"ascospore wall beta-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0034413","terms_by_termid":{"GO:0034413":null,"GO:0140748":null}}


id: PBO:0089111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in export of mRNAs Hrb1","termid":"PBO:0089111"}


id: PBO:0049466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin E (MNS blood group)","termid":"PBO:0049466"}


id: GO:0021565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the accessory nerve over time, from its formation to the mature structure. In mice, the spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["ISBN:0838580343","GOC:cls","GOC:jid","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve development","synonyms":[{"name":"CN XI development","type":"related"},{"name":"cranial nerve 11 development","type":"related"},{"name":"cranial nerve XI development","type":"exact"},{"name":"spinal accessory nerve development","type":"exact"}],"termid":"GO:0021565"}


id: GO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an alpha-beta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"},{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell activation involved in immune response","synonyms":[{"name":"alpha-beta T cell activation during immune response","type":"related"},{"name":"alpha-beta T lymphocyte activation during immune response","type":"related"},{"name":"alpha-beta T-cell activation during immune response","type":"related"},{"name":"alpha-beta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002287"}


id: PBO:0090161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I,II and III complex subunit Trs20","termid":"PBO:0090161"}


id: GO:1902358
data:
  {"annotated_genes":["SJAG_00671","SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61449,116065],"is_not":false,"summary":null,"term":"GO:1902358"},{"annotations":[87929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[109578,99838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"}]},"cv_name":"biological_process","definition":"The directed movement of sulfate across a membrane.","definition_xrefs":["PMID:9055073","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"sulphate transport","type":"exact"}],"termid":"GO:1902358","terms_by_termid":{"GO:1902358":null,"GO:1902434":null,"GO:1990557":null}}


id: GO:1900496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:1900494"},{"relation_name":"positively_regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0006790","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"activation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"activation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"narrow"},{"name":"positive regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"up-regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up-regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"upregulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"upregulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"}],"termid":"GO:1900496"}


id: PBO:0045179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB1 pseudogene 1","termid":"PBO:0045179"}


id: PBO:0028028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiotic_anaphase_I","termid":"PBO:0028028"}


id: PR:O13644
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02839","PANTHER:PTHR19957:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein sed5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.14c","secondary_identifiers":["UniProtKB:O13644"],"synonyms":[{"name":"Spom972h-STX5","type":"exact"}],"termid":"PR:O13644"}


id: MONDO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete homocarnosinosis (obsolete MONDO:0000699)","termid":"MONDO:0000699","xrefs":{"Monarch":{"xref_id":"0000699"}}}


id: PBO:0040218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 3C","termid":"PBO:0040218"}


id: PBO:0074559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 12","termid":"PBO:0074559"}


id: GO:0050240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + pyrogallol = (Z)-5-oxohex-2-enedioate + 2 H+.","definition_xrefs":["EC:1.13.11.35","RHEA:19673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"pyrogallol 1,2-oxygenase activity","secondary_identifiers":["MetaCyc:PYROGALLOL-12-OXYGENASE-RXN","KEGG_REACTION:R03246"],"synonyms":[{"name":"1,2,3-trihydroxybenzene:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"pyrogallol 1,2-dioxygenase activity","type":"related"}],"termid":"GO:0050240"}


id: PBO:0050086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 6","termid":"PBO:0050086"}


id: MONDO:0000630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the immune organ.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immune system organ benign neoplasm","secondary_identifiers":["DOID:0060092"],"synonyms":[{"name":"immune organ benign neoplasm","type":"exact"}],"termid":"MONDO:0000630","xrefs":{"Monarch":{"xref_id":"0000630"}}}


id: PBO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Nnf1","termid":"PBO:0002507"}


id: PBO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.17","termid":"PBO:0002621"}


id: MONDO:0014763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bombay phenotype (obsolete MONDO:0014763)","secondary_identifiers":["OMIM:616754"],"synonyms":[{"name":"Bombay phenotype","type":"exact"},{"name":"Bombay phenotype, digenic","type":"exact"},{"name":"Reunion variant","type":"related"},{"name":"para-Bombay phenotype","type":"related"}],"termid":"MONDO:0014763","xrefs":{"Monarch":{"xref_id":"0014763"}}}


id: PBO:0046588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 30","termid":"PBO:0046588"}


id: PBO:0065297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 1","termid":"PBO:0065297"}


id: PBO:0029225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_homologous_chromosome_pairing","termid":"PBO:0029225"}


id: GO:0022870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + mannose(out) = protein histidine + mannose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"mannose transmembrane transporter activity","termid":"GO:0015578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-mannose phosphotransferase system transporter activity","synonyms":[{"name":"mannose PTS transporter activity","type":"exact"}],"termid":"GO:0022870"}


id: GO:0097161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DH (Dbl homology) domain of a protein. The DH domain contains three structurally conserved regions separated by more variable regions. It is composed of 11 alpha helices that are folded into a flattened, elongated alpha-helix bundle in which two of the three conserved regions, conserved region 1 (CR1) and conserved region 3 (CR3), are exposed near the centre of one surface. CR1 and CR3, together with a part of alpha-6 and the DH/PH (pleckstrin homology) junction site, constitute the Rho GTPase interacting pocket.","definition_xrefs":["InterPro:IPR000219","PMID:12775584","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"DH domain binding","termid":"GO:0097161"}


id: MONDO:0017304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Albinism affecting the eye in which pigment of the hair and skin is normal or only slightly diluted. The classic type is X-linked (Nettleship-Falls), but an autosomal recessive form also exists. Ocular abnormalities may include reduced pigmentation of the iris, nystagmus, photophobia, strabismus, and decreased visual acuity.","definition_xrefs":["MESH:D016117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of melanin metabolism","termid":"MONDO:0018134"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"ocular albinism","secondary_identifiers":["ICD9:270.2","HP:0001107","SCTID:26399002","icd11.foundation:1147926040","MedDRA:10065276","UMLS:C0078917","MEDGEN:38147","GARD:21124","DOID:0050633","NORD:1516","Orphanet:284804"],"synonyms":[{"name":"XLOA","type":"narrow"},{"name":"ocular albinism","type":"exact"},{"name":"ocular albinism (disease)","type":"exact"}],"termid":"MONDO:0017304","xrefs":{"Monarch":{"xref_id":"0017304"}}}


id: PR:Q9URX8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup155 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02087","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin C890.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.06","secondary_identifiers":["UniProtKB:Q9URX8"],"synonyms":[{"name":"Spom972h-NUP155","type":"exact"}],"termid":"PR:Q9URX8"}


id: PBO:0062722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily T member 1","termid":"PBO:0062722"}


id: PBO:0029414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_branched,_elongated_germ_tube","termid":"PBO:0029414"}


id: PBO:0031392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_cysteine","termid":"PBO:0031392"}


id: GO:0046626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of insulin receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"insulin receptor signaling pathway","termid":"GO:0008286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of insulin receptor signaling pathway","synonyms":[{"name":"regulation of insulin receptor signalling pathway","type":"exact"}],"termid":"GO:0046626"}


id: MONDO:0035892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, acquired motor neuron disease characterized by a slowly progressive, unilateral, ascending or descending hemplegia, associated to unilateral or asymmetrical pyramidal signs and no sensory loss. It is a diagnosis of exclusion and contorversy exists regarding whether the presence of bulbar symptoms, sphincter disturbances, fasciculations or cognitive manifestations characterize the disease.","definition_xrefs":["Orphanet:94091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired motor neuron disease","termid":"MONDO:0020129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Mills syndrome","secondary_identifiers":["UMLS:C5191669","GARD:19250","MEDGEN:1682801"],"termid":"MONDO:0035892","xrefs":{"Monarch":{"xref_id":"0035892"}}}


id: PBO:0063730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 3","termid":"PBO:0063730"}


id: GO:0102346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxycerotoyl-CoA(4-) = trans-2-hexacosenoyl-CoA(4-) + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.134"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-cerotoyl-CoA dehydratase activity (obsolete GO:0102346)","termid":"GO:0102346"}


id: GO:0043466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic conversion of pyrimidine nucleobases, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase catabolic process","termid":"GO:0006208"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"pyrimidine nucleobase fermentation","synonyms":[{"name":"pyrimidine base fermentation","type":"exact"},{"name":"pyrimidine fermentation","type":"related"}],"termid":"GO:0043466"}


id: MONDO:0017565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"macrodactyly of fingers","termid":"MONDO:0017474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrodactyly of fingers, bilateral","secondary_identifiers":["Orphanet:295241","GARD:21228","MEDGEN:1730289","UMLS:C5437813","icd11.foundation:514958635"],"synonyms":[{"name":"macrodactyly of hand, bilateral","type":"exact"}],"termid":"MONDO:0017565","xrefs":{"Monarch":{"xref_id":"0017565"}}}


id: GO:0032665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-21 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-21 production","termid":"GO:0032625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-21 production","secondary_identifiers":["GO:0045390"],"synonyms":[{"name":"regulation of IL-21 production","type":"exact"},{"name":"regulation of interleukin-21 biosynthetic process","type":"narrow"}],"termid":"GO:0032665"}


id: GO:0010266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B1 stimulus.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B1","synonyms":[{"name":"response to thiamin","type":"exact"},{"name":"response to thiamine","type":"exact"}],"termid":"GO:0010266"}


id: MONDO:0017228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 autoimmune pancreatitis is a form of autoimmune pancreatitis (see this term) affecting both sexes and having a younger age of onset (<60 years) and presenting with abdominal pain, steatorrhea and obstructive jaundice.","definition_xrefs":["Orphanet:280315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune pancreatitis","termid":"MONDO:0015175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune pancreatitis type 2","secondary_identifiers":["UMLS:C5197785","GARD:21077","MEDGEN:1679984"],"synonyms":[{"name":"AIP type 2","type":"exact"},{"name":"duct-centric pancreatitis","type":"exact"}],"termid":"MONDO:0017228","xrefs":{"Monarch":{"xref_id":"0017228"}}}


id: PBO:0078396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 6-1","termid":"PBO:0078396"}


id: PBO:0067812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 114","termid":"PBO:0067812"}


id: GO:1905335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aggrephagy.","definition_xrefs":["PMID:25686248","GOC:pad","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"regulates","term_name":"aggrephagy","termid":"GO:0035973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of aggrephagy","termid":"GO:1905335"}


id: PBO:0059822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 2","termid":"PBO:0059822"}


id: PBO:0063719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamyl-peptidase I","termid":"PBO:0063719"}


id: PBO:0027444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_VLP_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0027444"}


id: GO:0018812
data:
  {"annotated_genes":["SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxy-fatty acyl-CoA = a (2E)-enoyl-CoA + H2O.","definition_xrefs":["RHEA:33767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enoyl-CoA hydratase activity","termid":"GO:0004300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5676637","Reactome:R-HSA-2066780","Reactome:R-HSA-389986","Reactome:R-HSA-2066778","Reactome:R-HSA-6809263","Reactome:R-HSA-8957389","EC:4.2.1.74","Reactome:R-HSA-390252"],"termid":"GO:0018812","terms_by_termid":{"GO:0102158":null}}


id: GO:0008263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of mismatched pyrimidine bases in DNA. Enzymes with this activity recognize and remove pyrimidines present in mismatches by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apyrimidinic (AP) site.","definition_xrefs":["PMID:9224623","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch base pair DNA N-glycosylase activity","termid":"GO:0000700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"pyrimidine-specific mismatch base pair DNA N-glycosylase activity","synonyms":[{"name":"G/T-mismatch-specific thymine-DNA glycosylase activity","type":"exact"}],"termid":"GO:0008263"}


id: PBO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 2 pseudogene 1","termid":"PBO:0043579"}


id: GO:0009641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Shade avoidance is a set of responses that plants display when they are subjected to the shade of another plant. It often includes elongation, altered flowering time, increased apical dominance and altered partitioning of resources. Plants are able to distinguish between the shade of an inanimate object (e.g. a rock) and the shade of another plant due to the altered balance between red and far-red light in the shade of a plant; this balance between red and far-red light is perceived by phytochrome.","definition_xrefs":["Wikipedia:Shade_avoidance"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shade avoidance","termid":"GO:0009641"}


id: MONDO:1010289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, non-human animal","secondary_identifiers":["OMIA:001764"],"termid":"MONDO:1010289","xrefs":{"Monarch":{"xref_id":"1010289"}}}


id: PBO:0058321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4694","termid":"PBO:0058321"}


id: MONDO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adult T-cell leukemia/lymphoma (obsolete MONDO:0000347)","termid":"MONDO:0000347","xrefs":{"Monarch":{"xref_id":"0000347"}}}


id: MONDO:0005420
data:
  {"annotated_genes":["SJAG_01926","SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026731"},{"annotations":[85219,85218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010134"}]},"cv_name":"mondo","definition":"Abnormally low levels of thyroid hormone.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01926":null,"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"is_obsolete":false,"name":"hypothyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:40930008","ICD9:244.9","MESH:D007037","NANDO:2100120","MEDGEN:6991","EFO:0004705","icd11.foundation:1722092627","DOID:1459","UMLS:C0020676","NCIT:C26800"],"synonyms":[{"name":"hypothyroid","type":"related"},{"name":"hypothyroidism","type":"exact"},{"name":"thyroid deficiency","type":"exact"},{"name":"thyroid insufficiency","type":"exact"},{"name":"underactive thyroid","type":"exact"}],"termid":"MONDO:0005420","terms_by_termid":{"MONDO:0010134":null,"MONDO:0026731":null},"xrefs":{"Monarch":{"xref_id":"0005420"}}}


id: MONDO:0008712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrocraniofacial dysostosis is a very rare form of acrofacial dyosotosis, reported in two sisters to date, characterized by short stature, acrocephaly, ocular hypertelorism, ptosis of eyelids, ocular proptosis, downslanting palpebral fissures, high nasal bridge, anteverted nostrils, short philtrum, cleft palate, micrognathia, abnormal external ears, preauricular pits, mixed hearing loss, bulbous digits, metatarsus varus, pectus excavatum and various radiological abnormalities. Features of this syndrome were reported to overlap with otopalatodigital syndrome types 1 and 2. There have been no further descriptions in the literature since 1988.","definition_xrefs":["Orphanet:949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrocraniofacial dysostosis","secondary_identifiers":["SCTID:720418008","GARD:3075","MEDGEN:349738","MESH:C536892","OMIM:201050","UMLS:C1860145"],"synonyms":[{"name":"Kaplan Plauchu Fitch syndrome","type":"related"},{"name":"Kaplan-Plauchu-Fitch syndrome","type":"exact"},{"name":"acrocraniofacial dysostosis","type":"exact"}],"termid":"MONDO:0008712","xrefs":{"Monarch":{"xref_id":"0008712"}}}


id: PBO:0052868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-11","termid":"PBO:0052868"}


id: PBO:0081613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 541","termid":"PBO:0081613"}


id: PBO:0057676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1267","termid":"PBO:0057676"}


id: PBO:0006200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_localizes","termid":"PBO:0006200"}


id: PBO:0035989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cAMP","termid":"PBO:0035989"}


id: GO:0032299
data:
  {"annotated_genes":["SJAG_01884","SJAG_00400","SJAG_02039"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87818,97616,102432],"is_not":false,"summary":null,"term":"GO:0032299"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses ribonuclease H activity, in which the catalytic subunit is a member of the RNase H2 (or HII) class. For example, in Saccharomyces the complex contains Rnh201p, Rnh202p and Rnh203p.","definition_xrefs":["GOC:mah","PMID:14734815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_02039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ribonuclease H2 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNase H2 complex","type":"exact"}],"termid":"GO:0032299","terms_by_termid":{"GO:0032299":null}}


id: PR:000044575
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rad9 gene Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"SPAC664.07c","type":"related"},{"name":"Spom-rad9","type":"exact"}],"termid":"PR:000044575"}


id: GO:0010169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large (200-800 kDa) multiprotein complex formed by 70-kDa and 5-kDa myrosinases, myrosinase- binding proteins (MBPs), MBP-related proteins and myrosinase-associated proteins. The complex has been identified in Brassica napus seeds.","definition_xrefs":["PMID:10682349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"thioglucosidase complex","synonyms":[{"name":"myrosinase complex","type":"exact"}],"termid":"GO:0010169"}


id: MONDO:0018494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-short stature-intellectual disability-facial dysmorphism syndrome is a rare genetic malformation syndrome with short stature characterized by postnatal microcephaly, failure to thrive and short stature, global developmental delay and intellectual disability, hypotonia, dysmorphic features (short nose, depressed nasal bridge, low set ears, short neck, clinodactyly and cutaneous syndactyly of T2-3 at birth and broad forehead, midface retrusion, epicanthal folds, laterally sparse eyebrows, short nose, long philtrum, widely spaced teeth, micrognathia and coarsening of facial features later in life). Other associated features include postnatal transient generalized edema, myopia, strabismus, hypothyroidism.","definition_xrefs":["Orphanet:423306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-short stature-intellectual disability-facial dysmorphism syndrome","secondary_identifiers":["MEDGEN:1659920","UMLS:C4749647","GARD:21751"],"termid":"MONDO:0018494","xrefs":{"Monarch":{"xref_id":"0018494"}}}


id: PBO:0049603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 6","termid":"PBO:0049603"}


id: MONDO:0100199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse gastric and lobular breast cancer syndrome with or without cleft lip and/or palate","termid":"MONDO:0100199","xrefs":{"Monarch":{"xref_id":"0100199"}}}


id: PBO:0034439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0034439"}


id: PBO:0067416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 530, pseudogene","termid":"PBO:0067416"}


id: PBO:0005748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin peroxidase Tpx1","termid":"PBO:0005748"}


id: PATO:0001097
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001097 relative force value (obsolete PATO:0001097)","termid":"PATO:0001097"}


id: SO:0000730
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gap in the sequence of known length. The unknown bases are filled in with N's.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap","synonyms":[{"name":"INSDC_feature:assembly_gap","type":"narrow"},{"name":"INSDC_feature:gap","type":"exact"}],"termid":"SO:0000730"}


id: PBO:0046162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF2 pseudogene 2","termid":"PBO:0046162"}


id: MONDO:0016006
data:
  {"annotated_genes":["SJAG_04540","SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019569"},{"annotations":[85602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019570"}]},"cv_name":"mondo","definition":"A multisystem condition characterized by short stature, a characteristic facial appearance, premature aging, photosensitivity, progressive neurological dysfunction, and intellectual deficit.","definition_xrefs":["Orphanet:191"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"excluded_subClassOf","term_name":"hereditary photodermatosis","termid":"MONDO:0015951"},{"relation_name":"excluded_subClassOf","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic hearing loss (obsolete MONDO:0019589)","termid":"MONDO:0019589"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"excluded_subClassOf","term_name":"DNA repair disease","termid":"MONDO:0021190"},{"relation_name":"excluded_subClassOf","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04114":null,"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019303","MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"Cockayne syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D003057","icd11.foundation:1206275070","NANDO:2200832","SCTID:21086008","NCIT:C9460","NORD:982","MedDRA:10009835","MEDGEN:40363","NANDO:1200677","DOID:2962","GARD:6122","UMLS:C0009207","ICD9:759.89"],"synonyms":[{"name":"Cockayne's syndrome","type":"related"},{"name":"Neill-Dingwall syndrome","type":"exact"},{"name":"dwarfism-retinal atrophy-deafness syndrome","type":"related"},{"name":"progeria-like syndrome","type":"related"},{"name":"progeroid nanism","type":"related"}],"termid":"MONDO:0016006","terms_by_termid":{"MONDO:0019569":null,"MONDO:0019570":null},"xrefs":{"Monarch":{"xref_id":"0016006"}}}


id: PBO:0087300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin, histone H3 deacetylase; involved along with Hst4p in telomeric silencing, cell cycle progression, radiation resistance, genomic stability and short-chain fatty acid metabolism; member of the Sir2 family of NAD(+)-dependent protein deacetylases","termid":"PBO:0087300"}


id: MONDO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypochondrogenesis (obsolete MONDO:0000852)","termid":"MONDO:0000852","xrefs":{"Monarch":{"xref_id":"0000852"}}}


id: GO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The sulfation of peptidyl-threonine to form peptidyl-O-sulfo-L-threonine.","definition_xrefs":["RESID:AA0362"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-threonine sulfation (obsolete GO:0050985)","termid":"GO:0050985"}


id: GO:0035024
data:
  {"annotated_genes":["SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104813],"is_not":false,"summary":null,"term":"GO:0035024"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Rho protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rho protein signal transduction","termid":"GO:0035023"},{"relation_name":"is_a","term_name":"negative regulation of small GTPase mediated signal transduction","termid":"GO:0051058"},{"relation_name":"negatively_regulates","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Rho protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of Rho protein signal transduction","type":"exact"},{"name":"down-regulation of Rho protein signal transduction","type":"exact"},{"name":"downregulation of Rho protein signal transduction","type":"exact"},{"name":"inhibition of Rho protein signal transduction","type":"narrow"}],"termid":"GO:0035024","terms_by_termid":{"GO:0035024":null}}


id: PBO:0029154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cumene_hydroperoxide","termid":"PBO:0029154"}


id: PBO:0108553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific Smp foci lncRNA Sme2 (meiRNA), long isoform","termid":"PBO:0108553"}


id: GO:1990113
data:
  {"annotated_genes":["SJAG_04093","SJAG_04012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105953,117495],"is_not":false,"summary":null,"term":"GO:1990113"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic RNA polymerase I complex.","definition_xrefs":["GOC:rb","PMID:23459708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04012":null,"SJAG_04093":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"RNA polymerase I assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase I complex assembly","type":"exact"},{"name":"RNA Polymerase I complex assembly","type":"exact"}],"termid":"GO:1990113","terms_by_termid":{"GO:1990113":null}}


id: PBO:0046793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor II, thrombin","termid":"PBO:0046793"}


id: PBO:0027962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutathione_level_during_nitrogen_starvation","termid":"PBO:0027962"}


id: PBO:0052615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich coiled-coil 1","termid":"PBO:0052615"}


id: MOD:00026
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-threonine.","definition_xrefs":["RESID:AA0017","DeltaMass:0","PubMed:2989287","ChEBI:30013","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine residue","synonyms":[{"name":"(2S,3R)-2-amino-3-hydroxybutanoic acid","type":"exact"},{"name":"2-azanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"L-threo-threonine","type":"exact"},{"name":"L-threonine","type":"exact"},{"name":"Thr","type":"exact"},{"name":"alpha-amino-beta-hydroxybutyric acid","type":"exact"},{"name":"beta-methylserine","type":"exact"}],"termid":"MOD:00026"}


id: PBO:0083224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with SRB8/YCR081W; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083224"}


id: PR:Q09130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif213 gene.","definition_xrefs":["UniProtKB:Q09130","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.09","synonyms":[{"name":"Spom972h-tif213","type":"exact"},{"name":"eIF-2-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09130"}


id: PBO:0079668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 16","termid":"PBO:0079668"}


id: PBO:0069951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1244, pseudogene","termid":"PBO:0069951"}


id: MONDO:1012255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic syndrome, non-human animal","termid":"MONDO:1011860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic syndrome, sheep","secondary_identifiers":["OMIA:000929-9940"],"termid":"MONDO:1012255","xrefs":{"Monarch":{"xref_id":"1012255"}}}


id: MONDO:0060781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired Fanconi syndrome","termid":"MONDO:0060779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Preeyasombat-Varavithya syndrome","secondary_identifiers":["MESH:C535269","UMLS:C2930859","GARD:4476","MEDGEN:443919"],"synonyms":[{"name":"Fanconi syndrome caused by degraded tetracycline","type":"related"}],"termid":"MONDO:0060781","xrefs":{"Monarch":{"xref_id":"0060781"}}}


id: FYPO:0001473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tacrolimus than normal when the cells are subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to tacrolimus","termid":"FYPO:0001379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to tacrolimus during salt stress","synonyms":[{"name":"resistance to FK506 during salt stress","type":"exact"},{"name":"resistance to salt stress and tacrolimus","type":"exact"},{"name":"resistance to tacrolimus and salt stress","type":"exact"},{"name":"resistance to tacrolimus during salt stress during mitotic cell cycle","type":"related"},{"name":"resistance to tacrolimus during salt stress during vegetative growth","type":"exact"},{"name":"resistant to tacrolimus during salt stress","type":"exact"}],"termid":"FYPO:0001473"}


id: PBO:0027056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_wall_galactomannan_level","termid":"PBO:0027056"}


id: MONDO:0020504
data:
  {"annotated_genes":["SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009992"}]},"cv_name":"mondo","definition":"An inborn error of metabolism characterized by abnormal urinary excretion of myoglobin due to acute destruction of skeletal muscle fibers.","definition_xrefs":["Orphanet:99845"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular lipidosis (obsolete MONDO:0016117)","termid":"MONDO:0016117"},{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of phospholipids, sphingolipids and fatty acids biosynthesis with skeletal muscle predominant involvement (obsolete MONDO:0018120)","termid":"MONDO:0018120"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hereditary recurrent myoglobinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16916","ICD10CM:R82.1","UMLS:C4274324","MEDGEN:901659","SCTID:716721003"],"synonyms":[{"name":"genetic recurrent myoglobinuria","type":"exact"}],"termid":"MONDO:0020504","terms_by_termid":{"MONDO:0009992":null},"xrefs":{"Monarch":{"xref_id":"0020504"}}}


id: PBO:0064925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 catalytic subunit","termid":"PBO:0064925"}


id: PBO:0087738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; this complex is involved in removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; heterozygous mutant shows haploinsufficiency in K1 killer toxin resistance","termid":"PBO:0087738"}


id: PBO:0075122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 172","termid":"PBO:0075122"}


id: PBO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk9 (predicted)","termid":"PBO:0001067"}


id: PBO:0043103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 15","termid":"PBO:0043103"}


id: FYPO:0004618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable astral microtubules.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubules absent from cell","termid":"FYPO:0004702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002399","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"astral microtubules absent from cell","synonyms":[{"name":"absent astral microtubules","type":"exact"},{"name":"astral microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"astral microtubules absent from cell during vegetative growth","type":"exact"},{"name":"cytoplasmic astral microtubules absent from cell","type":"exact"}],"termid":"FYPO:0004618"}


id: GO:0032193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ubiquinone, via the intermediates 2-polyprenylphenol and 2-polyprenyl-6-hydroxyphenol.","definition_xrefs":["GOC:mah","PMID:11583838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006744"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006744"],"is_obsolete":false,"name":"ubiquinone biosynthetic process via 2-polyprenylphenol","termid":"GO:0032193"}


id: GO:0030958
data:
  {"annotated_genes":["SJAG_03916","SJAG_02621","SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90778,111652,117524],"is_not":false,"summary":null,"term":"GO:0030958"}]},"cv_name":"cellular_component","definition":"A protein complex required for heterochromatin assembly; contains an Argonaute homolog, a chromodomain protein, and at least one additional protein; named for RNA-induced initiation of transcriptional gene silencing.","definition_xrefs":["PMID:14704433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi effector complex","termid":"GO:0031332"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03042":null,"SJAG_03916":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"RITS complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030958","terms_by_termid":{"GO:0030958":null}}


id: FYPO:0004118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that has one or more septa with normal size, shape, or structure, and that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PMID:15116432"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal septum morphology","termid":"FYPO:0006213"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"},{"relation_name":"is_a","term_name":"normal septum morphology","termid":"FYPO:0006213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, normal septum morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, normal septum morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, normal septum morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, normal septum morphology","type":"exact"}],"termid":"FYPO:0004118"}


id: PBO:0063124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 9","termid":"PBO:0063124"}


id: PBO:0071781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 9","termid":"PBO:0071781"}


id: MOD:01641
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-leucine removal","termid":"MOD:01641"}


id: PBO:0076345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 12","termid":"PBO:0076345"}


id: GO:1990306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex consisting of RSP5 and BUL components. It polyubiquinates plasma membrane transporters and permeases, required for their endocytosis and subsequent degradation in the vacuole. BUL1 or BUL2, respectively, bind to the target protein, enabling ubiquitylation by Rsp5. Phosphorylation of BUL proteins results in binding to 14-3-3 proteins, protecting the permeases from down-regulation.","definition_xrefs":["GOC:bhm","PMID:9931424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RSP5-BUL ubiquitin ligase complex","synonyms":[{"name":"RSP5-BUL1 complex","type":"exact"},{"name":"RSP5-BUL2 complex","type":"related"}],"termid":"GO:1990306"}


id: PBO:0031838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mating_projection_absent","termid":"PBO:0031838"}


id: PBO:0011417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_expressivity","termid":"PBO:0011417"}


id: PR:O94340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.07c gene.","definition_xrefs":["UniProtKB:O94340","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C1271.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.07c","synonyms":[{"name":"Spom972h-SPBC1271.07c","type":"exact"}],"termid":"PR:O94340"}


id: GO:0034832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E)-geranial + H2O + NAD+ = geranate + 2 H+ + NADH.","definition_xrefs":["RHEA:34351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"geranial dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-11970","EC:1.2.1.86"],"termid":"GO:0034832"}


id: MONDO:0012410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Finnish upper limb-onset distal myopathy is a rare, genetic distal myopathy characterized by slowly progressive distal to proximal limb muscle weakness and atrophy, with characteristic early involvement of thenar and hypothenar muscles. Patients present with clumsiness of the hands and stumbling in the fourth to fifth decade of life, and later develop steppage gait and contractures of the hands. Progressive fatty degeneration affects intrinsic muscles of the hands, gluteus medium and both anterior and posterior compartment muscles of the distal lower extremities, with later involvement of forearm muscles, triceps, infraspinatus and the proximal lower limb muscles. Asymmetry of muscle involvement is common.","definition_xrefs":["Orphanet:399086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"Finnish upper limb-onset distal myopathy","secondary_identifiers":["MEDGEN:400595","OMIM:610099","DOID:0111189","UMLS:C1864706","GARD:17652","SCTID:763718009"],"synonyms":[{"name":"MPD3","type":"exact"},{"name":"distal myopathy type 3","type":"exact"},{"name":"myopathy, distal, 3","type":"related"}],"termid":"MONDO:0012410","xrefs":{"Monarch":{"xref_id":"0012410"}}}


id: PATO:0001358
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having a knob or knoblike protuberance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"umbonate","termid":"PATO:0001358"}


id: MONDO:0975761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 126, susceptibility to","secondary_identifiers":["OMIM:620931"],"termid":"MONDO:0975761","xrefs":{"Monarch":{"xref_id":"0975761"}}}


id: GO:0034477
data:
  {"annotated_genes":["SJAG_01798"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93229],"is_not":false,"summary":null,"term":"GO:0034477"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a U6 snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA 3'-end processing","termid":"GO:0034472"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01798":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016073"],"is_obsolete":false,"name":"U6 snRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"U6 snRNA 3' end processing","type":"exact"}],"termid":"GO:0034477","terms_by_termid":{"GO:0034477":null}}


id: GO:0102533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: genkwanin + S-adenosyl-L-methionine = apigenin 4',7-dimethyl ether + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"genkwanin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14750"],"termid":"GO:0102533"}


id: FYPO:0005059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break resection is decreased. Meiotic DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["GO:1990899","PomBase:mah","PMID:26130711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"decreased meiotic DNA double-strand break resection","synonyms":[{"name":"decreased meiotic DNA double-strand break resectioning","type":"exact"},{"name":"reduced meiotic DNA double-strand break resection","type":"exact"}],"termid":"FYPO:0005059"}


id: PBO:0046586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 28","termid":"PBO:0046586"}


id: PBO:0080526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAS protein family homolog 8, pseudogene","termid":"PBO:0080526"}


id: PBO:0029472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_acid_phosphatase_activity","termid":"PBO:0029472"}


id: GO:0050067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + O2 = 5-aminopentanamide + CO2 + H2O.","definition_xrefs":["RHEA:14601","EC:1.13.12.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lysine 2-monooxygenase activity","secondary_identifiers":["MetaCyc:LYSINE-2-MONOOXYGENASE-RXN","KEGG_REACTION:R00449"],"synonyms":[{"name":"L-lysine-2-monooxygenase activity","type":"related"},{"name":"L-lysine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"lysine monooxygenase activity","type":"related"},{"name":"lysine oxygenase activity","type":"related"}],"termid":"GO:0050067"}


id: GO:0010211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetyl-leucine + H2O = indole-3-acetate + L-leucine.","definition_xrefs":["MetaCyc:RXN-2982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IAA-amino acid conjugate hydrolase activity","termid":"GO:0010178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"IAA-Leu conjugate hydrolase activity","termid":"GO:0010211"}


id: GO:0050452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + glutathione + NADP+ = CoA-glutathione + NADPH + H+.","definition_xrefs":["RHEA:14617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"CoA-glutathione reductase (NADPH) activity","secondary_identifiers":["EC:1.8.1.10","MetaCyc:COA-GLUTATHIONE-REDUCTASE-NADPH-RXN"],"synonyms":[{"name":"CoA-glutathione reductase (NADP) activity","type":"exact"},{"name":"CoA-glutathione reductase activity","type":"broad"},{"name":"NADPH-dependent coenzyme A-SS-glutathione reductase activity","type":"exact"},{"name":"NADPH:CoA-glutathione oxidoreductase activity","type":"exact"},{"name":"coenzyme A disulfide-glutathione reductase activity","type":"broad"},{"name":"coenzyme A glutathione disulfide reductase activity","type":"broad"},{"name":"glutathione:NADP+ oxidoreductase (CoA-acylating)","type":"exact"}],"termid":"GO:0050452"}


id: MONDO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic conjunctivitis","termid":"MONDO:0002314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"parasitic conjunctivitis","secondary_identifiers":["ICD9:372.15","UMLS:C0155148","MEDGEN:509809","SCTID:13816006","DOID:13341"],"termid":"MONDO:0001690","xrefs":{"Monarch":{"xref_id":"0001690"}}}


id: GO:0052652
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue and the base is a purine.","definition_xrefs":["PMID:23911318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"cyclic nucleotide metabolic process","termid":"GO:0009187"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"cyclic purine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cyclic purine nucleotide metabolism","type":"exact"}],"termid":"GO:0052652","terms_by_termid":{"GO:0006198":null}}


id: GO:0015144
data:
  {"annotated_genes":["SJAG_03820","SJAG_03606","SJAG_03608","SJAG_02958","SJAG_03960","SJAG_00057","SJAG_04905","SJAG_04068"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113613,75834,116649,72683,110099,113619,102469,91999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[110100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005354"},{"annotations":[102470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015149"},{"annotations":[113620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[116653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[95274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[95275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of carbohydrate from one side of a membrane to the other.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"carbohydrate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1901476"],"synonyms":[{"name":"carbohydrate transporter activity","type":"related"},{"name":"sugar transporter","type":"narrow"}],"termid":"GO:0015144","terms_by_termid":{"GO:0005351":null,"GO:0005354":null,"GO:0005358":null,"GO:0005364":null,"GO:0008506":null,"GO:0015149":null,"GO:0140108":null}}


id: GO:1901353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylglycerol biosynthetic process.","definition_xrefs":["PMID:12869188","GOC:TermGenie","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"regulation of phosphatidylglycerol biosynthetic process","termid":"GO:1901351"},{"relation_name":"positively_regulates","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylglycerol biosynthetic process","synonyms":[{"name":"activation of phosphatidylglycerol anabolism","type":"narrow"},{"name":"activation of phosphatidylglycerol biosynthesis","type":"narrow"},{"name":"activation of phosphatidylglycerol biosynthetic process","type":"narrow"},{"name":"activation of phosphatidylglycerol formation","type":"narrow"},{"name":"activation of phosphatidylglycerol synthesis","type":"narrow"},{"name":"positive regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"positive regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidylglycerol formation","type":"exact"},{"name":"positive regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"up regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"up regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"up regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidylglycerol formation","type":"exact"},{"name":"up regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"up-regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"up-regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidylglycerol formation","type":"exact"},{"name":"up-regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"upregulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"upregulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"upregulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidylglycerol formation","type":"exact"},{"name":"upregulation of phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:1901353"}


id: PBO:0047356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein, pseudogene","termid":"PBO:0047356"}


id: GO:1904679
data:
  {"annotated_genes":["SJAG_04506","SJAG_03595"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92079,97545],"is_not":false,"summary":null,"term":"GO:1904679"}]},"cv_name":"biological_process","definition":"The directed movement of myo-inositol from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","PMID:9560432","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"myo-inositol transport","termid":"GO:0015798"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"myo-inositol import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097357"],"synonyms":[{"name":"myo-inositol import into cell","type":"exact"}],"termid":"GO:1904679","terms_by_termid":{"GO:1904679":null}}


id: GO:0051000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monooxygenase activity","termid":"GO:0032770"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase activity","termid":"GO:0050999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric-oxide synthase activity","synonyms":[{"name":"NOS activator","type":"exact"},{"name":"activation of nitric-oxide synthase activity","type":"narrow"},{"name":"nitric-oxide synthase activator","type":"exact"},{"name":"positive regulation of NOS activity","type":"exact"},{"name":"stimulation of nitric-oxide synthase activity","type":"narrow"},{"name":"up regulation of nitric-oxide synthase activity","type":"exact"},{"name":"up-regulation of nitric-oxide synthase activity","type":"exact"},{"name":"upregulation of nitric-oxide synthase activity","type":"exact"}],"termid":"GO:0051000"}


id: PBO:0045973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHBP1 antisense RNA 1","termid":"PBO:0045973"}


id: MONDO:0017246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary sequestration","termid":"MONDO:0017843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extralobar congenital pulmonary sequestration","secondary_identifiers":["GARD:21091","MEDGEN:1843113","UMLS:C5679951","Orphanet:280811"],"synonyms":[{"name":"congenital extrapulmonary sequestration","type":"exact"},{"name":"extralobar congenital bronchopulmonary sequestration","type":"exact"}],"termid":"MONDO:0017246","xrefs":{"Monarch":{"xref_id":"0017246"}}}


id: GO:0016298
data:
  {"annotated_genes":["SJAG_04973","SJAG_04110","SJAG_00321","SJAG_04323","SJAG_04292","SJAG_02091","SJAG_02487","SJAG_01219","SJAG_04105","SJAG_02068","SJAG_02715","SJAG_00158","SJAG_03204","SJAG_02089","SJAG_02100","SJAG_03604","SJAG_01198","SJAG_02161","SJAG_00199","SJAG_04790","SJAG_02093","SJAG_01519","SJAG_02543","SJAG_01036","SJAG_02907"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98318],"is_not":false,"summary":null,"term":"GO:0016298"},{"annotations":[108278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052712"},{"annotations":[91390,116421,114203,89633,113505,93426,100307,91398,102463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[108279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[70492,117025,97179,77911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047372"},{"annotations":[97268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[92888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[91391,99249,89634,100308,102464,91399,114204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[113289,92076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004620"},{"annotations":[95437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[108280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"},{"annotations":[103482,102842,114518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004771"},{"annotations":[93540,89627,97974,114238,93427,91404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a lipid.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00199":null,"SJAG_00321":null,"SJAG_01036":null,"SJAG_01198":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02068":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02715":null,"SJAG_02907":null,"SJAG_03204":null,"SJAG_03604":null,"SJAG_04105":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04323":null,"SJAG_04790":null,"SJAG_04973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"lipase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-163402","Reactome:R-HSA-163432"],"termid":"GO:0016298","terms_by_termid":{"GO:0004435":null,"GO:0004620":null,"GO:0004622":null,"GO:0004623":null,"GO:0004630":null,"GO:0004767":null,"GO:0004771":null,"GO:0004806":null,"GO:0016298":null,"GO:0034479":null,"GO:0047372":null,"GO:0052712":null,"GO:0052714":null}}


id: PBO:0041265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q binding protein pseudogene 2","termid":"PBO:0041265"}


id: GO:0047028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 6-lactoyl-5,6,7,8-tetrahydropterin = NADPH + H+ + 6-pyruvoyltetrahydropterin.","definition_xrefs":["MetaCyc:1.1.1.220-RXN","EC:1.1.1.220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin 2'-reductase activity","secondary_identifiers":["RHEA:11772"],"synonyms":[{"name":"6-lactoyl-5,6,7,8-tetrahydropterin:NADP+ 2'-oxidoreductase activity","type":"related"},{"name":"6-pyruvoyl tetrahydropterin (2'-oxo)reductase activity","type":"related"},{"name":"6-pyruvoyl-tetrahydropterin 2'-reductase activity","type":"related"},{"name":"6-pyruvoyltetrahydropterin reductase activity","type":"related"},{"name":"6PPH4(2'-oxo) reductase activity","type":"related"},{"name":"pyruvoyl-tetrahydropterin reductase activity","type":"related"}],"termid":"GO:0047028"}


id: FYPO:0004381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic nuclear division results in the connection of a single kinetochore to both spindle poles.","definition_xrefs":["PMID:21306900","PomBase:mah","PMID:17426725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"merotelic kinetochore attachment","termid":"FYPO:0002651"},{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"merotelic kinetochore attachment during mitosis","synonyms":[{"name":"merotelic attachment of spindle microtubules to kinetochore during mitosis","type":"exact"},{"name":"merotelic kinetochore attachment during mitotic M phase","type":"related"},{"name":"merotelic kinetochore attachment during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004381"}


id: PBO:0078550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 40","termid":"PBO:0078550"}


id: SO:0001177
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-base-paired sequence of three nucleotide bases in tRNA. It has sequence T-Psi-C.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_loop","synonyms":[{"name":"T loop","type":"exact"},{"name":"TpsiC loop","type":"exact"}],"termid":"SO:0001177"}


id: PBO:0049806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1 pseudogene 1","termid":"PBO:0049806"}


id: PR:P36624
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorbitol dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11695:SF38","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.05c","secondary_identifiers":["UniProtKB:P36624"],"synonyms":[{"name":"L-iditol 2-dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1773.05c","type":"related"},{"name":"Spom972h-SORD","type":"exact"},{"name":"protein tms1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36624"}


id: PBO:0044184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNS antisense RNA 1","termid":"PBO:0044184"}


id: PBO:0068492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 76, pseudogene","termid":"PBO:0068492"}


id: GO:0019499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration, reacting with the ferric form of cytochrome aa3 and thus blocking the electron transport chain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanide metabolic process","synonyms":[{"name":"cyanide metabolism","type":"exact"}],"termid":"GO:0019499"}


id: GO:0060130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a thyroid-stimulating hormone-secreting cell over time, from its formation to the mature structure. A thyroid-stimulating hormone-secreting cell is a basophil cell of the anterior pituitary that produces thyroid stimulating hormone, thyrotrophin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell development","termid":"GO:0002068"},{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"thyroid-stimulating hormone-secreting cell differentiation","termid":"GO:0060129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid-stimulating hormone-secreting cell development","synonyms":[{"name":"TSH-secreting cell development","type":"exact"},{"name":"beta-basophil development","type":"exact"},{"name":"thyroid stimulating hormone secreting cell development","type":"exact"},{"name":"thyrotrope development","type":"exact"},{"name":"thyrotroph development","type":"exact"}],"termid":"GO:0060130"}


id: GO:0015880
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The directed movement of coenzyme A into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, is an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"coenzyme A transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015880","terms_by_termid":{"GO:1990559":null}}


id: GO:0043252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of organic anions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sodium-independent organic anion transport","secondary_identifiers":["Reactome:R-HSA-879518"],"termid":"GO:0043252"}


id: GO:0017046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peptide with hormonal activity in animals.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"peptide hormone binding","synonyms":[{"name":"polypeptide hormone binding","type":"exact"}],"termid":"GO:0017046"}


id: PBO:0090879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELLA family acetyltransferase","termid":"PBO:0090879"}


id: PBO:0046060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit J","termid":"PBO:0046060"}


id: GO:0008429
data:
  {"annotated_genes":["SJAG_02414"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113093],"is_not":false,"summary":null,"term":"GO:0008429"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylethanolamine, a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphatidylethanolamine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008429","terms_by_termid":{"GO:0008429":null}}


id: SO:0000651
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic LSU rRNA is an RNA component of the large subunit of cytosolic ribosomes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_large_subunit_primary_transcript","termid":"SO:0000325"},{"relation_name":"is_a","term_name":"cytosolic_rRNA","termid":"SO:0002343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_LSU_rRNA","synonyms":[{"name":"cytosolic LSU RNA","type":"exact"},{"name":"cytosolic LSU rRNA","type":"exact"},{"name":"cytosolic large subunit rRNA","type":"exact"}],"termid":"SO:0000651"}


id: PBO:0028047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_astral_microtubules","termid":"PBO:0028047"}


id: PBO:0058173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4468","termid":"PBO:0058173"}


id: GO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of neutrophils such that the total number of neutrophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:pr","PMID:12960266","GOC:add","PMID:12752675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil homeostasis","termid":"GO:0001780"}


id: GO:0097219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sieve plate that contains several specialized sieve areas in either a scalariform or reticulate arrangement.","definition_xrefs":["ISBN:0471738433","POC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sieve plate","termid":"GO:0097218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"compound sieve plate","termid":"GO:0097219"}


id: PBO:0044895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPP autophagy regulator 1","termid":"PBO:0044895"}


id: MOD:01077
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanedithiol/TFA cyclic adduct","termid":"MOD:01077"}


id: FYPO:0003954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which triglyceride biosynthesis is decreased.","definition_xrefs":["GO:0019493","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased triglyceride biosynthetic process","synonyms":[{"name":"decreased TAG biosynthetic process","type":"exact"},{"name":"decreased triacylglycerol biosynthesis","type":"exact"},{"name":"decreased triacylglycerol biosynthetic process","type":"exact"},{"name":"decreased triglyceride biosynthesis","type":"exact"},{"name":"decreased triglyceride biosynthetic process during mitotic cell cycle","type":"related"},{"name":"decreased triglyceride biosynthetic process during vegetative growth","type":"exact"},{"name":"reduced triglyceride biosynthetic process","type":"exact"}],"termid":"FYPO:0003954"}


id: PBO:0031860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_component_assembly","termid":"PBO:0031860"}


id: PBO:0070113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 27 pseudogene","termid":"PBO:0070113"}


id: GO:0001093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor of the TFIIB class, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II.","definition_xrefs":["GOC:krc","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TFIIB-class transcription factor binding","termid":"GO:0001093"}


id: GO:1900546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900546)","synonyms":[{"name":"activation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900546"}


id: MONDO:0017168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign epithelial tumor of salivary glands","secondary_identifiers":["UMLS:C5190858","MEDGEN:1684009","Orphanet:276148","ICD10CM:D11.0"],"termid":"MONDO:0017168","xrefs":{"Monarch":{"xref_id":"0017168"}}}


id: FYPO:0002617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium butyrate. Cells stop growing (and may die) at a concentration of sodium butyrate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sodium butyrate","synonyms":[{"name":"hypersensitive to sodium butyrate","type":"exact"},{"name":"sensitive to sodium butyrate during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium butyrate during vegetative growth","type":"exact"}],"termid":"FYPO:0002617"}


id: PBO:0006179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulator","termid":"PBO:0006179"}


id: PBO:0061890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligophrenin 1","termid":"PBO:0061890"}


id: PBO:0082229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, Ub-ligase adaptor for Rsp5p; regulates starvation- and substrate-induced Ub-dependent endocytosis of select plasma membrane localized amino acid transporters, recruiting Rsp5p to its targets; role in basal internalization and turnover of Ste2p, mating and zygote formation; recruits Rsp5p to Ste2p via its 2 PPXY motifs; inhibited by Npr1p-mediated phosphorylation, affecting cytosol and plasma membrane translocation; localization regulated by Rsp5p-dependent ubiquitination","termid":"PBO:0082229"}


id: MONDO:1012601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any sex-linked dwarfism that occurs in chickens due to a mutation in the GHR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sex-linked dwarfism, GHR-related, chicken","secondary_identifiers":["OMIA:000309-9031"],"termid":"MONDO:1012601","xrefs":{"Monarch":{"xref_id":"1012601"}}}


id: SO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant occurring in the intron, within 10 bases of exon.","definition_xrefs":["sanger:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended_intronic_splice_region_variant","synonyms":[{"name":"extended intronic splice region variant","type":"exact"}],"termid":"SO:0001995"}


id: PBO:0071957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 7","termid":"PBO:0071957"}


id: PBO:0080960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 3","termid":"PBO:0080960"}


id: PBO:0055849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 1","termid":"PBO:0055849"}


id: GO:1902953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ER to Golgi vesicle-mediated transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:sjp","PMID:17855360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of ER to Golgi vesicle-mediated transport","termid":"GO:0060628"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of ER to Golgi vesicle-mediated transport","synonyms":[{"name":"activation of ER to Golgi transport","type":"narrow"},{"name":"activation of ER to Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of endoplasmic reticulum to Golgi transport","type":"narrow"},{"name":"activation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of rough ER to cis-Golgi transport","type":"narrow"},{"name":"activation of rough ER to cis-Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of rough endoplasmic reticulum to cis-Golgi transport","type":"narrow"},{"name":"activation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"narrow"},{"name":"positive regulation of ER to Golgi transport","type":"exact"},{"name":"positive regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"positive regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"positive regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"positive regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"positive regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"positive regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of ER to Golgi transport","type":"exact"},{"name":"up regulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"up regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"up regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"up regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of ER to Golgi transport","type":"exact"},{"name":"up-regulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"up-regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"up-regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"up-regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of ER to Golgi transport","type":"exact"},{"name":"upregulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"upregulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"upregulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"upregulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"}],"termid":"GO:1902953"}


id: GO:0051087
data:
  {"annotated_genes":["SJAG_01684","SJAG_00403","SJAG_03955","SJAG_03094","SJAG_04336","SJAG_01545","SJAG_01160","SJAG_01737","SJAG_04817","SJAG_01121","SJAG_04187","SJAG_03135","SJAG_04518","SJAG_00574","SJAG_01914","SJAG_03784","SJAG_00564","SJAG_04014","SJAG_00436","SJAG_03794","SJAG_04228","SJAG_02077"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58214,58884,60786,66478,67704,69438,69772,71230,72445,74177,75626,76085,77153,78514,78714],"is_not":false,"summary":null,"term":"GO:0051087"},{"annotations":[66128,77364,70486,58809,79294,66357,79538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030544"}]},"cv_name":"molecular_function","definition":"Binding to a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.","definition_xrefs":["PMID:10585443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00403":null,"SJAG_00436":null,"SJAG_00564":null,"SJAG_00574":null,"SJAG_01121":null,"SJAG_01160":null,"SJAG_01545":null,"SJAG_01684":null,"SJAG_01737":null,"SJAG_01914":null,"SJAG_02077":null,"SJAG_03094":null,"SJAG_03135":null,"SJAG_03784":null,"SJAG_03794":null,"SJAG_03955":null,"SJAG_04014":null,"SJAG_04187":null,"SJAG_04228":null,"SJAG_04336":null,"SJAG_04518":null,"SJAG_04817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein-folding chaperone binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"chaperone binding","type":"broad"},{"name":"chaperone protein binding","type":"exact"},{"name":"co-chaperone activity","type":"related"},{"name":"co-chaperonin activity","type":"related"}],"termid":"GO:0051087","terms_by_termid":{"GO:0030544":null,"GO:0051087":null}}


id: GO:0140659
data:
  {"annotated_genes":["SJAG_01665","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79387,100194],"is_not":false,"summary":null,"term":"GO:0140659"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a motor protein.","definition_xrefs":["PMID:23142046","PMID:33221250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function regulator activity","termid":"GO:0098772"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01665":null,"SJAG_04781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"cytoskeletal motor regulator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"motor activity regulator activity","type":"broad"}],"termid":"GO:0140659","terms_by_termid":{"GO:0140659":null}}


id: MONDO:0600017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acinar dysplasia in which the cause of the disease is a mutation in the FGF10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acinar dysplasia","termid":"MONDO:0600016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acinar dysplasia caused by mutation in FGF10","synonyms":[{"name":"FGF10 acinar dysplasia","type":"exact"},{"name":"FGF10 related acinar dysplasia","type":"exact"}],"termid":"MONDO:0600017","xrefs":{"Monarch":{"xref_id":"0600017"}}}


id: GO:0032380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of sterols within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"is_a","term_name":"regulation of intracellular lipid transport","termid":"GO:0032377"},{"relation_name":"regulates","term_name":"intracellular sterol transport","termid":"GO:0032366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular sterol transport","termid":"GO:0032380"}


id: PBO:0056340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 4","termid":"PBO:0056340"}


id: MONDO:0011550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, with hypertrichosis and intellectual disability","secondary_identifiers":["OMIM:605400","UMLS:C1854306","MESH:C565331","MEDGEN:344255"],"synonyms":[{"name":"fibromatosis, gingival, with hypertrichosis and intellectual disability","type":"exact"},{"name":"fibromatosis, gingival, with hypertrichosis and mental retardation","type":"exact"}],"termid":"MONDO:0011550","xrefs":{"Monarch":{"xref_id":"0011550"}}}


id: PBO:0076086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid sulfatase (microsomal) pseudogene 1","termid":"PBO:0076086"}


id: PBO:0081409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 257","termid":"PBO:0081409"}


id: MONDO:0015079
data:
  {"annotated_genes":["SJAG_02398","SJAG_03920","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84928,84929,84930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011740"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited neuroendocrine tumor (obsolete MONDO:0025511)","termid":"MONDO:0025511"},{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"multiple polyglandular tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10WHO:D44.8","Orphanet:100094","icd11.foundation:1316827435","GARD:19766"],"termid":"MONDO:0015079","terms_by_termid":{"MONDO:0011740":null},"xrefs":{"Monarch":{"xref_id":"0015079"}}}


id: PBO:0084042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI inositol deacylase of the endoplasmic reticulum (ER); negatively regulates COPII vesicle formation; prevents production of vesicles with defective subunits; required for proper discrimination between resident ER proteins and Golgi-bound cargo molecules; functional ortholog of human PGAP1, mutation of which is associated with intellectual disability and encephalopathy","termid":"PBO:0084042"}


id: MONDO:0012545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neutral lipid storage disease","termid":"MONDO:0015611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"neutral lipid storage myopathy","secondary_identifiers":["icd11.foundation:1512138529","OMIM:610717","UMLS:C1853136","SCTID:699315005","Orphanet:98908","GARD:10288","MEDGEN:339913"],"synonyms":[{"name":"NLSDM","type":"exact"},{"name":"neutral lipid storage disease with myopathy","type":"related"},{"name":"neutral lipid storage disease with myopathy without ichthyosis","type":"exact"},{"name":"neutral lipid storage disease without ichthyosis","type":"related"},{"name":"triglyceride deposit cardiomyovasculopathy","type":"related"}],"termid":"MONDO:0012545","xrefs":{"Monarch":{"xref_id":"0012545"}}}


id: MOD:00097
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to glycine amide.","definition_xrefs":["PubMed:13591312","RESID:AA0088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine amide","synonyms":[{"name":"2-aminoacetamide","type":"exact"},{"name":"2-aminoethanamide","type":"exact"},{"name":"2-azanylethanamide","type":"exact"},{"name":"GlyN","type":"exact"},{"name":"MOD_RES Glycine amide","type":"exact"},{"name":"amidated glycine","type":"exact"},{"name":"glycinamide","type":"exact"},{"name":"glycine amide","type":"exact"}],"termid":"MOD:00097"}


id: GO:0033101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a cellular bud.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"cellular bud","termid":"GO:0005933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cellular bud membrane","synonyms":[{"name":"cellular bud plasma membrane","type":"exact"}],"termid":"GO:0033101"}


id: GO:0016125
data:
  {"annotated_genes":["SJAG_03598","SJAG_02044","SJAG_00261","SJAG_03249","SJAG_02104","SJAG_04018","SJAG_00413","SJAG_03750","SJAG_04270","SJAG_03509","SJAG_04217","SJAG_04049","SJAG_03715","SJAG_00453","SJAG_00624","SJAG_03929","SJAG_02719","SJAG_04059","SJAG_04499","SJAG_04790","SJAG_04810","SJAG_00717","SJAG_02982","SJAG_03018","SJAG_03024","SJAG_01474","SJAG_00770","SJAG_03235","SJAG_03531","SJAG_02068","SJAG_02855","SJAG_00370","SJAG_00158","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100970],"is_not":false,"summary":null,"term":"GO:0016125"},{"annotations":[94140,89171,96092,106995,111257,114344,87990,110759,115989,88248,107174,107309,104174,114676,91002,109542,92052,103752,103942,97539,98353,108702,92106,105993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[114517,88283,118312,103481,102841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008204"},{"annotations":[93383],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[109311],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[109312],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[105310,88079,88080],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00261":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sterol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-211976"],"synonyms":[{"name":"sterol metabolism","type":"exact"}],"termid":"GO:0016125","terms_by_termid":{"GO:0006696":null,"GO:0008204":null,"GO:0010895":null,"GO:0016125":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: FYPO:0005643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased, and an increased amount of the protein is instead detected in the nucleus and at the spindle pole body.","definition_xrefs":["PMID:24478458","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body","synonyms":[{"name":"decreased protein localisation to cell tip, with protein mislocalized to nucleus and spindle pole body","type":"exact"},{"name":"decreased protein localization to cell end, with protein mislocalized to nucleus and spindle pole body","type":"exact"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and SPB","type":"exact"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body, during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body","type":"exact"}],"termid":"FYPO:0005643"}


id: PBO:0004299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic loci regulator Clr1","termid":"PBO:0004299"}


id: GO:1903080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of C-C chemokine receptor CCR7 signaling pathway.","definition_xrefs":["GOC:BHF","GO_REF:0000058","PMID:11602640","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine-mediated signaling pathway","termid":"GO:0070099"},{"relation_name":"regulates","term_name":"C-C chemokine receptor CCR7 signaling pathway","termid":"GO:0038118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of C-C chemokine receptor CCR7 signaling pathway","synonyms":[{"name":"regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"regulation of CCR7 signaling pathway","type":"related"}],"termid":"GO:1903080"}


id: SO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_threonylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_threonylcarbamoyladenosine","secondary_identifiers":["RNAMOD:011"],"synonyms":[{"name":"N6 threonylcarbamoyladenosine","type":"exact"},{"name":"N6-threonylcarbamoyladenosine","type":"exact"},{"name":"t6A","type":"exact"}],"termid":"SO:0001305"}


id: GO:0018898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:jl","UM-BBD_pathwayID:dcb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2,4-dichlorobenzoate metabolic process","synonyms":[{"name":"2,4-dichlorobenzoate metabolism","type":"exact"}],"termid":"GO:0018898"}


id: PBO:0045828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 18","termid":"PBO:0045828"}


id: PBO:0069930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1223, pseudogene","termid":"PBO:0069930"}


id: MONDO:0019182
data:
  {"annotated_genes":["SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic developmental defect during embryogenesis (obsolete MONDO:0015960)","termid":"MONDO:0015960"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"obesity disorder","termid":"MONDO:0011122"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"inherited obesity","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:885912","OMIM:601665","GARD:18935","Orphanet:77828","UMLS:C4054476"],"synonyms":[{"name":"genetic obesity","type":"exact"},{"name":"genetic obesity (disease)","type":"exact"},{"name":"leanness, inherited, autosomal recessive","type":"exact"},{"name":"monogenic obesity","type":"exact"},{"name":"obesity, association with, Autosomal recessive","type":"exact"},{"name":"obesity, early-onset, susceptibility to, Autosomal recessive","type":"exact"},{"name":"obesity, late-onset, Autosomal recessive","type":"exact"},{"name":"obesity, mild, early-onset, Autosomal recessive","type":"exact"},{"name":"obesity, severe, Autosomal recessive","type":"exact"},{"name":"obesity, severe, and type II diabetes, Autosomal recessive","type":"exact"},{"name":"obesity, susceptibility to, Autosomal recessive","type":"exact"}],"termid":"MONDO:0019182","terms_by_termid":{"MONDO:0010961":null},"xrefs":{"Monarch":{"xref_id":"0019182"}}}


id: MONDO:0033015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratodermia variabilis","termid":"MONDO:0017851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis et progressiva 5","secondary_identifiers":["MEDGEN:1626376","UMLS:C4540331","DOID:0080251","GARD:18669","OMIM:617756"],"synonyms":[{"name":"EKVP5","type":"related"},{"name":"erythrokeratodermia variabilis ET progressiva 5","type":"related"}],"termid":"MONDO:0033015","xrefs":{"Monarch":{"xref_id":"0033015"}}}


id: FYPO:0006639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal diameter (thickness; width).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal vegetative cell diameter","synonyms":[{"name":"normal cell diameter during vegetative growth","type":"exact"},{"name":"normal vegetative cell diameter during mitotic cell cycle","type":"related"},{"name":"normal vegetative cell thickness","type":"exact"},{"name":"normal vegetative cell width","type":"exact"}],"termid":"FYPO:0006639"}


id: MONDO:0001985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A partial occlusion of the retinal artery.","definition_xrefs":["NCIT:C35192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal artery occlusion","termid":"MONDO:0006948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"partial arterial retinal occlusion","secondary_identifiers":["MEDGEN:57599","SCTID:776009","ICD9:362.33","UMLS:C0154839","DOID:14522"],"synonyms":[{"name":"partial retinal arterial occlusion","type":"exact"},{"name":"retinal partial arterial occlusion","type":"exact"}],"termid":"MONDO:0001985","xrefs":{"Monarch":{"xref_id":"0001985"}}}


id: PBO:0065350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked 2","termid":"PBO:0065350"}


id: PBO:0072972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1D member 2","termid":"PBO:0072972"}


id: GO:0099153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of serotonin from a presynapse, across a chemical synapse, the subsequent activation of serotonin receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dph","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission, serotonergic","synonyms":[{"name":"serotonergic synaptic transmission","type":"exact"}],"termid":"GO:0099153"}


id: PATO:0000315
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000315 color pattern value (obsolete PATO:0000315)","termid":"PATO:0000315"}


id: GO:0060987
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex that contains a tube of lipid surrounded by a protein coat.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex","termid":"GO:0032994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"lipid tube","termid":"GO:0060987"}


id: MONDO:0007377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type I granular corneal dystrophy (GCDI) is a rare form of stromal corneal dystrophy characterized by multiple small deposits in the superficial central corneal stroma, and progressive visual impairment, which may sometimes be severe.","definition_xrefs":["Orphanet:98962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-stromal TGFBI dystrophy","termid":"MONDO:0000764"},{"relation_name":"is_a","term_name":"stromal corneal dystrophy","termid":"MONDO:0020213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"granular corneal dystrophy type I","secondary_identifiers":["MESH:C537304","OMIM:121900","SCTID:419039007","UMLS:C1641846","GARD:9677","DOID:0080530","MEDGEN:351521"],"synonyms":[{"name":"CDGG1","type":"related"},{"name":"GCD1","type":"exact"},{"name":"GCDI","type":"exact"},{"name":"Groenouw type I corneal dystrophy","type":"related"},{"name":"classic GCD","type":"exact"},{"name":"classic granular corneal dystrophy","type":"exact"},{"name":"corneal dystrophy Groenouw type I","type":"exact"},{"name":"corneal dystrophy granular type","type":"related"},{"name":"corneal dystrophy punctate or nodular","type":"related"},{"name":"corneal dystrophy, Groenouw type 1","type":"related"},{"name":"corneal dystrophy, Groenouw type I","type":"related"},{"name":"corneal dystrophy, punctate or nodular","type":"related"},{"name":"granular corneal dystrophy type 1","type":"exact"},{"name":"granular corneal dystrophy, type 1","type":"related"}],"termid":"MONDO:0007377","xrefs":{"Monarch":{"xref_id":"0007377"}}}


id: PBO:0048019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric chelate reductase 1","termid":"PBO:0048019"}


id: SO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase III binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter","synonyms":[{"name":"RNA polymerase C promoter","type":"exact"},{"name":"RNApol III promoter","type":"exact"},{"name":"pol III promoter","type":"exact"},{"name":"polymerase III promoter","type":"exact"}],"termid":"SO:0000171"}


id: PBO:0090991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taz1-like protein","termid":"PBO:0090991"}


id: PBO:0027793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphatase_activity_during_cellular_response_to_phosphate_starvation","termid":"PBO:0027793"}


id: GO:1903540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a postsynaptic membrane.","definition_xrefs":["GO_REF:0000087","GOC:kmv","PMID:9753322","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"is_a","term_name":"protein localization to postsynaptic membrane","termid":"GO:1903539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to postsynaptic membrane","synonyms":[{"name":"establishment of protein localisation in postsynaptic membrane","type":"exact"},{"name":"establishment of protein localisation to postsynaptic membrane","type":"exact"},{"name":"establishment of protein localization in postsynaptic membrane","type":"exact"}],"termid":"GO:1903540"}


id: MONDO:0013039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3-M syndrome in which the cause of the disease is a mutation in the OBSL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-M syndrome","termid":"MONDO:0007477"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"3M syndrome 2","secondary_identifiers":["OMIM:612921","UMLS:C2752041","MESH:C567862","GARD:15591","MEDGEN:414168"],"synonyms":[{"name":"3-M syndrome 2","type":"exact"},{"name":"3-M syndrome caused by mutation in OBSL1","type":"exact"},{"name":"3M syndrome 2","type":"exact"},{"name":"3M2","type":"related"},{"name":"OBSL1 3-M syndrome","type":"exact"},{"name":"three M syndrome 2","type":"exact"},{"name":"three M syndrome type 2","type":"exact"}],"termid":"MONDO:0013039","xrefs":{"Monarch":{"xref_id":"0013039"}}}


id: FYPO:0002017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the mitotic cell cycle is arrested during G2 phase, before new end take-off (NETO) has occurred, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abolished NETO","termid":"FYPO:0001018"},{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic interphase","termid":"FYPO:0001028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic interphase before NETO","synonyms":[{"name":"abnormal cell cycle arrest in interphase before NETO during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic interphase before NETO during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic interphase before activation of bipolar cell growth","type":"related"},{"name":"abnormal cell cycle arrest in mitotic interphase before cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic interphase before new end take-off","type":"related"},{"name":"abnormal cell cycle arrest in mitotic interphase before switch from monopolar to bipolar cell growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in interphase before NETO","type":"exact"},{"name":"cell cycle arrest in mitotic interphase before NETO","type":"broad"}],"termid":"FYPO:0002017"}


id: PBO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Pcr1","termid":"PBO:0002432"}


id: PBO:0060731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 2","termid":"PBO:0060731"}


id: PBO:0070947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 2","termid":"PBO:0070947"}


id: GO:0044434
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a chloroplast, a chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast part (obsolete GO:0044434)","termid":"GO:0044434"}


id: GO:2001069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to glycogen.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glycogen binding","synonyms":[{"name":"animal starch binding","type":"related"},{"name":"liver starch binding","type":"related"}],"termid":"GO:2001069"}


id: PBO:0079219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tau tubulin kinase 1","termid":"PBO:0079219"}


id: PBO:0040468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase mitochondrial F1 complex assembly factor 2","termid":"PBO:0040468"}


id: PBO:0031406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shmoo_with_long_tip","termid":"PBO:0031406"}


id: PBO:0053455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 407","termid":"PBO:0053455"}


id: FYPO:0006548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which gene expression occurs to a greater extent than normal. One or more parts of gene expression, such as transcription or translation, may be affected, and all genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased gene expression","termid":"FYPO:0006548"}


id: PBO:0048261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose mutarotase","termid":"PBO:0048261"}


id: MOD:01834
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 5x(13)C-labeled L-methionine sulfoxide.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled L-methionine sulfoxide","termid":"MOD:01834"}


id: MONDO:0019013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angioedema is characterized by the occurrence of transitory and recurrent subcutaneous and/or submucosal edemas resulting in swelling and/or abdominal pain.","definition_xrefs":["Orphanet:658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic urticaria","termid":"MONDO:0006526"},{"relation_name":"is_a","term_name":"angioedema","termid":"MONDO:0010481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"non-histaminic angioedema","secondary_identifiers":["ICD9:995.1","GARD:18701","SCTID:41291007"],"synonyms":[{"name":"angioneurotic edema","type":"exact"},{"name":"angioneurotic oedema","type":"exact"},{"name":"bradykinine-induced angioedema","type":"exact"},{"name":"non histamine-induced angioedema","type":"exact"}],"termid":"MONDO:0019013","xrefs":{"Monarch":{"xref_id":"0019013"}}}


id: PBO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.2.5","termid":"PBO:0001583"}


id: PBO:0005302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase Sec59 (predicted)","termid":"PBO:0005302"}


id: PBO:0043097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 9","termid":"PBO:0043097"}


id: MOD:01059
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dibromo-L-tyrosine","termid":"MOD:01023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(81)Br labeled 3',5'-dibromotyrosine","termid":"MOD:01059"}


id: GO:0060357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of leucine import. Leucine import is the directed movement of leucine into a cell or organelle.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of L-leucine import (obsolete GO:0060357)","synonyms":[{"name":"regulation of L-leucine import","type":"narrow"},{"name":"regulation of L-leucine uptake","type":"narrow"},{"name":"regulation of leucine import","type":"broad"},{"name":"regulation of leucine uptake","type":"exact"}],"termid":"GO:0060357"}


id: SO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded DNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_sequence_secondary_structure","synonyms":[{"name":"DNA sequence secondary structure","type":"exact"}],"termid":"SO:0000142"}


id: MONDO:0018776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy","termid":"MONDO:0015358"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"demyelinating hereditary motor and sensory neuropathy","secondary_identifiers":["UMLS:C5680106","MEDGEN:1843348","GARD:21952","Orphanet:476116"],"synonyms":[{"name":"demyelinating HMSN","type":"exact"},{"name":"demyelinating hereditary motor and sensory neuropathy","type":"exact"}],"termid":"MONDO:0018776","xrefs":{"Monarch":{"xref_id":"0018776"}}}


id: MONDO:1011789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrodysplasia ossificans, non-human animal","secondary_identifiers":["OMIA:000388"],"termid":"MONDO:1011789","xrefs":{"Monarch":{"xref_id":"1011789"}}}


id: FYPO:0003006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to caffeine","synonyms":[{"name":"decreased protein phosphorylation during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to caffeine","type":"exact"}],"termid":"FYPO:0003006"}


id: PBO:0051094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 4","termid":"PBO:0051094"}


id: MONDO:0013861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyotrophic lateral sclerosis type 17 (obsolete MONDO:0013861)","termid":"MONDO:0013861","xrefs":{"Monarch":{"xref_id":"0013861"}}}


id: MONDO:0100471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally low level of 25-hydroxyvitamin D in the blood.","definition_xrefs":["NCIT:C114830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin deficiency disorder","termid":"MONDO:0024298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D deficiency","secondary_identifiers":["SCTID:34713006","ICD9:268","MESH:D014808","icd11.foundation:2080031371","HP:0100512","UMLS:C0042870","ICD10CM:E55","DOID:10574","MEDGEN:12114"],"synonyms":[{"name":"DEFIC VITAMIN D","type":"exact"},{"name":"VITAMIN D DEFIC","type":"exact"},{"name":"avitaminosis D","type":"exact"},{"name":"avitaminosis D, NOS","type":"exact"},{"name":"deficiencies, vitamin D","type":"exact"},{"name":"deficiency of vitamin D (disorder)","type":"exact"},{"name":"deficiency, vitamin D","type":"exact"},{"name":"vitamin D deficiencies","type":"exact"},{"name":"vitamin D deficiency (disorder)","type":"exact"},{"name":"vitamin D deficiency, NOS","type":"exact"},{"name":"vitamin D insufficiency","type":"exact"}],"termid":"MONDO:0100471","xrefs":{"Monarch":{"xref_id":"0100471"}}}


id: PBO:0091302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrolase, N-terminal portion of Crd1 fusion protein","termid":"PBO:0091302"}


id: PBO:0058938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MISP family member 3","termid":"PBO:0058938"}


id: MONDO:0014818
data:
  {"annotated_genes":["SJAG_03182"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85355],"is_not":false,"summary":null,"term":"MONDO:0014818"}]},"cv_name":"mondo","definition":"Any familial nephrotic syndrome in which the cause of the disease is a mutation in the NUP205 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080381","GARD:16167","MEDGEN:900240","OMIM:616893","UMLS:C4225165"],"synonyms":[{"name":"NPHS13","type":"exact"},{"name":"NUP205 familial nephrotic syndrome","type":"exact"},{"name":"familial nephrotic syndrome caused by mutation in NUP205","type":"exact"},{"name":"nephrotic syndrome, type 13","type":"exact"},{"name":"nephrotic syndrome, type 13; NPHS13","type":"exact"}],"termid":"MONDO:0014818","terms_by_termid":{"MONDO:0014818":null},"xrefs":{"Monarch":{"xref_id":"0014818"}}}


id: PBO:0059185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Morf4 family associated protein 1 like 1","termid":"PBO:0059185"}


id: GO:0072007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesangial cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"pericyte cell differentiation","termid":"GO:1904238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell differentiation","termid":"GO:0072007"}


id: MONDO:0012513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any maturity-onset diabetes of the young in which the cause of the disease is a mutation in the KLF11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005015","MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 7","secondary_identifiers":["OMIM:610508","GARD:10661","MEDGEN:351232","UMLS:C1864839","DOID:0111106","SCTID:609574004","MESH:C566466"],"synonyms":[{"name":"KLF11 maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"MODY KLF11 related","type":"related"},{"name":"MODY type 7","type":"related"},{"name":"MODY7","type":"exact"},{"name":"diabetes mellitus MODY type 7","type":"related"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in KLF11","type":"exact"},{"name":"maturity-onset diabetes of the young, type 7","type":"related"},{"name":"maturity-onset diabetes of the young, type VII","type":"exact"},{"name":"type 7 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0012513","xrefs":{"Monarch":{"xref_id":"0012513"}}}


id: PBO:0003624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-dependent RNA helicase Mss116 (predicted)","termid":"PBO:0003624"}


id: GO:0031404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloride ion (Cl-).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chloride ion binding","synonyms":[{"name":"Cl- ion binding","type":"exact"},{"name":"chloride binding","type":"exact"}],"termid":"GO:0031404"}


id: PBO:0080204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vezatin, adherens junctions transmembrane protein","termid":"PBO:0080204"}


id: PBO:0090364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GAP Hba1","termid":"PBO:0090364"}


id: PBO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase","termid":"PBO:0001668"}


id: GO:0072673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level and in which the structure of a lamellipodium is organized.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellipodium organization","termid":"GO:0097581"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lamellipodium morphogenesis","synonyms":[{"name":"lamellipodium organization","type":"related"}],"termid":"GO:0072673"}


id: SO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature where there has been exchange of genetic material in the event of mitosis or meiosis","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_feature","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"recombination feature","type":"exact"}],"termid":"SO:0000298"}


id: PBO:0113138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1; involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall; protein abundance increases in response to DNA replication stress; GAPDH-derived antimicrobial peptides secreted by S. cerevisiae are active against a wide variety of wine-related yeasts and bacteria","termid":"PBO:0113138"}


id: PATO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation of shape.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of shape","termid":"PATO:0001929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invariant shape","termid":"PATO:0001931"}


id: MONDO:0030708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An cervicitis (disease) caused by infection with Trichomonas vaginalis.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichomoniasis","termid":"MONDO:0002154"},{"relation_name":"is_a","term_name":"cervicitis","termid":"MONDO:0002345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichomonas cervicitis","secondary_identifiers":["UMLS:C0742232","MEDGEN:149274","NCIT:C35588"],"synonyms":[{"name":"Trichomonas cervicitis","type":"exact"},{"name":"Trichomonas vaginalis caused cervicitis (disease)","type":"exact"},{"name":"Trichomonas vaginalis cervicitis (disease)","type":"exact"}],"termid":"MONDO:0030708","xrefs":{"Monarch":{"xref_id":"0030708"}}}


id: PBO:0051198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-16 (pseudogene)","termid":"PBO:0051198"}


id: MONDO:0013909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human herpesvirus 8, susceptibility to","secondary_identifiers":["MEDGEN:766754","OMIM:614836","UMLS:C3553840"],"synonyms":[{"name":"HHV-8, susceptibility to","type":"related"},{"name":"HHV8S","type":"exact"},{"name":"HUMAN HERPESVIRUS 8, susceptibility to","type":"related"}],"termid":"MONDO:0013909","xrefs":{"Monarch":{"xref_id":"0013909"}}}


id: PBO:0089395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF757 family protein, human PBDC1 ortholog","termid":"PBO:0089395"}


id: GO:0042580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialised tubular organelle, assembled in hexagonal bundles within an external membrane. Mannosomes are specific to molluscs and are thought to be involved in a general stress reaction.","definition_xrefs":["PMID:11912051","GOC:jl","PMID:9799531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005777"],"is_obsolete":false,"name":"mannosome","termid":"GO:0042580"}


id: PBO:0000238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside diphosphate kinase Ndk1","termid":"PBO:0000238"}


id: PBO:0090201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone N-acetyltransferase Naa40/NatD","termid":"PBO:0090201"}


id: FYPO:0000952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuoles present in increased numbers","termid":"FYPO:0002790"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"vacuoles present in increased numbers during vegetative growth","synonyms":[{"name":"additional vacuoles present during vegetative growth","type":"exact"},{"name":"extra vacuoles during vegetative growth","type":"exact"},{"name":"vacuoles present in greater numbers during vegetative growth","type":"exact"},{"name":"vacuoles present in increased numbers during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000952"}


id: PBO:0042104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 177","termid":"PBO:0042104"}


id: PBO:0064996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 4","termid":"PBO:0064996"}


id: PBO:0029804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_with_abnormal_cell_shape_(obsolete_FYPO:0002433)","termid":"PBO:0029804"}


id: PBO:0084079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-cyclohydrolase I, catalyzes first step in folic acid biosynthesis; human homolog GCH1 is implicated in dopa-responsive dystonia (DRD), and can complement yeast null mutant","termid":"PBO:0084079"}


id: MONDO:0029142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 111","secondary_identifiers":["UMLS:C4748374","DOID:0111640","GARD:22659","MEDGEN:1648423","OMIM:618145"],"synonyms":[{"name":"DFNB111","type":"narrow"},{"name":"deafness, autosomal recessive 111","type":"narrow"}],"termid":"MONDO:0029142","xrefs":{"Monarch":{"xref_id":"0029142"}}}


id: PBO:0042060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 122","termid":"PBO:0042060"}


id: PBO:0050181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA synthase 1","termid":"PBO:0050181"}


id: PR:Q09691
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide chain release factor 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.17","synonyms":[{"name":"MRF-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MtRF-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mrf1","type":"exact"}],"termid":"PR:Q09691"}


id: PBO:0090590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-amylase homolog Aah3","termid":"PBO:0090590"}


id: PBO:0078487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 7-1","termid":"PBO:0078487"}


id: MONDO:0010657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic aciduria and homocystinuria","termid":"MONDO:0016826"},{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005066","MONDO:0005570","MONDO:0004736"],"is_obsolete":false,"name":"methylmalonic acidemia with homocystinuria, type cblX","secondary_identifiers":["UMLS:C0796208","DOID:0111814","MEDGEN:167111","MESH:C563136","Orphanet:369962","GARD:13137","OMIM:309541"],"synonyms":[{"name":"combined defect in adenosylcobalamin and methylcobalamin synthesis, type cblX","type":"exact"},{"name":"intellectual disability, X-linked 3","type":"related"},{"name":"mental retardation, X-linked 3","type":"related"},{"name":"methylmalonic acidemia and HOMOCYSTEINEMIA, cblX type","type":"related"},{"name":"methylmalonic acidemia and homocysteinemia type cblX","type":"related"},{"name":"methylmalonic aciduria and homocysteinemia, cblx type, X-linked recessive","type":"exact"},{"name":"methylmalonic aciduria with homocystinuria, type cblX","type":"exact"}],"termid":"MONDO:0010657","xrefs":{"Monarch":{"xref_id":"0010657"}}}


id: FYPO:0000786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which plasmids are lost at a higher frequency than normal. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased plasmid loss","synonyms":[{"name":"increased plasmid loss during mitotic cell cycle","type":"related"},{"name":"increased plasmid loss during vegetative growth","type":"exact"}],"termid":"FYPO:0000786"}


id: PBO:0039914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 12","termid":"PBO:0039914"}


id: PBO:0069770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1053, pseudogene","termid":"PBO:0069770"}


id: PBO:0057044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 133b","termid":"PBO:0057044"}


id: MONDO:0018632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 11","termid":"MONDO:0016910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"11q22.2q22.3 microdeletion syndrome","secondary_identifiers":["UMLS:C5680062","MEDGEN:1805294","GARD:21858","Orphanet:444002"],"synonyms":[{"name":"11q22.2-q22.3 deletion syndrome","type":"exact"},{"name":"Del(11)(q22.2q22.3)","type":"exact"},{"name":"monosomy 11q22.2-q22.3","type":"exact"},{"name":"monosomy 11q22.2q22.3","type":"exact"}],"termid":"MONDO:0018632","xrefs":{"Monarch":{"xref_id":"0018632"}}}


id: PBO:0066500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raftlin, lipid raft linker 1 pseudogene 1","termid":"PBO:0066500"}


id: PBO:0073419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seizure related 6 homolog","termid":"PBO:0073419"}


id: GO:0032464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein homooligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein oligomerization","termid":"GO:0032461"},{"relation_name":"is_a","term_name":"regulation of protein homooligomerization","termid":"GO:0032462"},{"relation_name":"positively_regulates","term_name":"protein homooligomerization","termid":"GO:0051260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"positive regulation of protein homooligomerization","synonyms":[{"name":"activation of protein homooligomerization","type":"narrow"},{"name":"induction of protein homooligomerization","type":"related"},{"name":"stimulation of protein homooligomerization","type":"narrow"},{"name":"up regulation of protein homooligomerization","type":"exact"},{"name":"up-regulation of protein homooligomerization","type":"exact"},{"name":"upregulation of protein homooligomerization","type":"exact"}],"termid":"GO:0032464"}


id: PBO:0077562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 269","termid":"PBO:0077562"}


id: PBO:0002566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein","termid":"PBO:0002566"}


id: PR:Q09879
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.08c","synonyms":[{"name":"Spom972h-ubp5","type":"exact"},{"name":"deubiquitinating enzyme 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09879"}


id: SO:0002140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of replication that initiates early in S phase.","definition_xrefs":["PMID:9115207","PMID:23348837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early_origin_of_replication","synonyms":[{"name":"early origin","type":"exact"},{"name":"early origin of replication","type":"exact"},{"name":"early replication origin","type":"exact"}],"termid":"SO:0002140"}


id: GO:0016695
data:
  {"annotated_genes":["SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008901"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.12.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on hydrogen as donor, other acceptors","type":"narrow"}],"termid":"GO:0016695","terms_by_termid":{"GO:0008901":null}}


id: PBO:0068297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 4","termid":"PBO:0068297"}


id: PBO:0057561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 718","termid":"PBO:0057561"}


id: PBO:0061956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 12","termid":"PBO:0061956"}


id: GO:0140673
data:
  {"annotated_genes":["SJAG_02314","SJAG_00913","SJAG_04038","SJAG_00925","SJAG_04257","SJAG_00293","SJAG_04670","SJAG_02416","SJAG_02319","SJAG_00914","SJAG_03128","SJAG_02873","SJAG_02698","SJAG_00320","SJAG_03006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89580,90750,91889,92893,94116,94984,103049,108236,108241,110726,113048,113989,115656,116348,118279],"is_not":false,"summary":null,"term":"GO:0140673"}]},"cv_name":"biological_process","definition":"A chromatin remodeling process that reestablishes the chromatin structure following the passage of RNA polymerase II during transcription elongation, thus preventing cryptic transcription initiation.","definition_xrefs":["PMID:28053344","PMID:22922743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"part_of","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02416":null,"SJAG_02698":null,"SJAG_02873":null,"SJAG_03006":null,"SJAG_03128":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04670":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"transcription elongation-coupled chromatin remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication-independent chromatin organization","type":"related"},{"name":"chromatin maintenance during transcription elongation","type":"related"},{"name":"co-transcriptional chromatin reassembly","type":"exact"},{"name":"euchromatin maintenance during transcription elongation","type":"exact"},{"name":"maintenance of chromatin integrity during transcription elongation by RNAPII","type":"exact"},{"name":"maintenance of transcriptionally active chromatin during transcription elongation","type":"exact"},{"name":"transciptional elongation-coupled chromatin remodeling","type":"exact"},{"name":"transcription elongation coupled chromatin remodeling","type":"exact"},{"name":"transcriptional elongation-coupled chromatin remodeling","type":"exact"}],"termid":"GO:0140673","terms_by_termid":{"GO:0140673":null}}


id: GO:1902145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cell cycle checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cell cycle checkpoint signaling","synonyms":[{"name":"regulation of G1/S transition checkpoint effector process","type":"related"},{"name":"regulation of G2/M transition checkpoint effector process","type":"related"},{"name":"regulation of cell cycle checkpoint effector process","type":"exact"},{"name":"regulation of response to G1/S transition checkpoint signaling","type":"related"},{"name":"regulation of response to G2/M transition checkpoint signaling","type":"related"},{"name":"regulation of response to signal involved in G1/S transition checkpoint","type":"related"},{"name":"regulation of response to signal involved in G2/M transition checkpoint","type":"related"},{"name":"regulation of response to signal involved in cell cycle checkpoint","type":"exact"}],"termid":"GO:1902145"}


id: SO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An MNV that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"substitution_artifact","termid":"SO:0002176"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNV_artifact","synonyms":[{"name":"MNV artifact","type":"exact"}],"termid":"SO:0002179"}


id: PBO:0043218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic linker associated protein 2","termid":"PBO:0043218"}


id: GO:0035330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hippo signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"hippo signaling","termid":"GO:0035329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of hippo signaling","synonyms":[{"name":"regulation of hippo signaling cascade","type":"related"},{"name":"regulation of hippo signaling pathway","type":"exact"},{"name":"regulation of hippo signalling cascade","type":"related"}],"termid":"GO:0035330"}


id: PBO:0060868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 11","termid":"PBO:0060868"}


id: GO:0031830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5A serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 5A serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 5A receptor binding","type":"exact"},{"name":"type 5A serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031830"}


id: PBO:0073422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seizure related 6 homolog like 2","termid":"PBO:0073422"}


id: PBO:0080731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWC family member 3","termid":"PBO:0080731"}


id: PBO:0041595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 6","termid":"PBO:0041595"}


id: PBO:0012255
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratrico peptide repeat","termid":"PBO:0012255"}


id: GO:0036505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prosaposin to initiate a change in cell activity. Prosaposin is the glycoprotein precursor of four cleavage products (saposins A, B, C and D).","definition_xrefs":["GOC:PARL","GOC:bf","PMID:23690594","PMID:9388493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prosaposin receptor activity","synonyms":[{"name":"prosaposin-activated receptor activity","type":"exact"}],"termid":"GO:0036505"}


id: PBO:0013088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosylxylosylprotein 3-beta-galactosyltransferase Pvg1","termid":"PBO:0013088"}


id: PBO:0047644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase family member 1C","termid":"PBO:0047644"}


id: GO:0047564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxycyclohexanone + A = AH(2) + cyclohexane-1,3-dione.","definition_xrefs":["EC:1.1.99.26","RHEA:15905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-hydroxycyclohexanone dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03212","MetaCyc:3-HYDROXYCYCLOHEXANONE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"3-hydroxycyclohexanone:acceptor 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047564"}


