# terms

id: GO:0045943
data:
  {"annotated_genes":["SJAG_01764","SJAG_03897","SJAG_05187","SJAG_02608","SJAG_01149"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91555,95500,106434,110021,116437],"is_not":false,"summary":null,"term":"GO:0045943"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription mediated by RNA polymerase I.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase I","termid":"GO:0006356"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"positively_regulates","term_name":"transcription by RNA polymerase I","termid":"GO:0006360"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_01764":null,"SJAG_02608":null,"SJAG_03897":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription by RNA polymerase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of transcription from RNA polymerase I promoter","type":"narrow"},{"name":"positive regulation of transcription from Pol I promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase I promoter","type":"exact"},{"name":"stimulation of transcription from RNA polymerase I promoter","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase I promoter","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase I promoter","type":"exact"},{"name":"upregulation of transcription from RNA polymerase I promoter","type":"exact"}],"termid":"GO:0045943","terms_by_termid":{"GO:0045943":null}}


id: GO:0050694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyllactosamine + 3'-phosphoadenosine 5'-phosphosulfate = 3-sulfo-N-acetyllactosamine + adenosine 3',5'-bisphosphate. N-acetyllactosamine residues are found in a number of different carbohydrate types. N-acetyllactosamine can also be written as Gal-beta-(1,4)-GlcNAc.","definition_xrefs":["PMID:11323440","GOC:ai","PMID:11356829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"galactose 3-O-sulfotransferase activity","synonyms":[{"name":"Gal-3-O-sulfotransferase activity","type":"exact"},{"name":"galactose 3-O-sulphotransferase activity","type":"exact"}],"termid":"GO:0050694"}


id: PBO:0041403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 89","termid":"PBO:0041403"}


id: MONDO:0006155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the colon. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C5497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neuroendocrine tumor G1","termid":"MONDO:0006162"},{"relation_name":"is_a","term_name":"neuroendocrine tumor of the colon, well differentiated, low or intermediate grade tumor","termid":"MONDO:0015067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colon neuroendocrine tumor G1","secondary_identifiers":["UMLS:C1333084","EFO:1000188","MEDGEN:234158"],"synonyms":[{"name":"carcinoid tumor of colon","type":"exact"},{"name":"carcinoid tumor of the colon","type":"exact"},{"name":"carcinoid tumour of colon","type":"exact"},{"name":"carcinoid tumour of the colon","type":"exact"},{"name":"colon NET G1","type":"exact"},{"name":"colon carcinoid tumor","type":"exact"},{"name":"colon carcinoid tumor (disease)","type":"exact"},{"name":"colon carcinoid tumour","type":"exact"},{"name":"colon carcinoid tumour (disease)","type":"exact"},{"name":"colon neuroendocrine neoplasm G1","type":"exact"},{"name":"colon neuroendocrine tumor G1","type":"exact"},{"name":"colon neuroendocrine tumor, well differentiated, low grade","type":"exact"},{"name":"colonic carcinoid tumor","type":"exact"},{"name":"colonic carcinoid tumour","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of colon","type":"exact"}],"termid":"MONDO:0006155","xrefs":{"Monarch":{"xref_id":"0006155"}}}


id: GO:0044592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of pullulan stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pullulan","termid":"GO:0044592"}


id: MONDO:0044971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of macromolecular complex (obsolete MONDO:0044971)","termid":"MONDO:0044971","xrefs":{"Monarch":{"xref_id":"0044971"}}}


id: PBO:0090339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase","termid":"PBO:0090339"}


id: PBO:0083810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein with two zinc fingers; present in nucleus of growing cells, relocates to cytoplasm in starved cells via a process mediated by Cpr1p; binds translation elongation factor eEF-1 (Tef1p); relative distribution to nucleus increases upon DNA replication stress; human ZPR1 gene can complement yeast by allowing growth during down-regulation of yeast zpr1","termid":"PBO:0083810"}


id: MONDO:0060720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation with defective fucosylation","secondary_identifiers":["MEDGEN:1647704","OMIMPS:618005","UMLS:C4693905"],"synonyms":[{"name":"CDGF","type":"related"},{"name":"congenital disorder of glycosylation with defective fucosylation","type":"exact"}],"termid":"MONDO:0060720","xrefs":{"Monarch":{"xref_id":"0060720"}}}


id: GO:0039661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing in a cellular organelle, lipid bilayer of an organelle envelope, occurring in a host cell.","definition_xrefs":["GOC:bf","GOC:ch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host outer membrane","termid":"GO:0044384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host organelle outer membrane","termid":"GO:0039661"}


id: GO:0106282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-beta,7-beta-dihydroxy-5-beta-cholan-24-oate + NAD+ = 3-beta-hydroxy-7-oxo-5-beta-cholan-24-oate + H+ + NADH.","definition_xrefs":["PMID:12917011","RHEA:42024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isoursodeoxycholate 7-beta-dehydrogenase (NAD+) activity","termid":"GO:0106282"}


id: MONDO:0044727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma with a poor prognosis, characterized by the presence of a mixture of exocrine and neuroendocrine malignant epithelial cells in both the pancreas and metastatic sites. Symptoms include jaundice, abdominal pain, and weight loss.","definition_xrefs":["NCIT:C45843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"},{"relation_name":"is_a","term_name":"digestive system mixed adenoneuroendocrine carcinoma","termid":"MONDO:0006182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic carcinoma with mixed differentiation","secondary_identifiers":["GARD:22057","MEDGEN:353935","Orphanet:506112","UMLS:C1709050"],"synonyms":[{"name":"MiNEN of pancreas","type":"exact"},{"name":"mixed exocrine-endocrine carcinoma of the pancreas","type":"exact"},{"name":"mixed neuroendocrine-nonneuroendocrine neoplasm of pancreas","type":"related"},{"name":"pancreatic MiNEN","type":"exact"},{"name":"pancreatic carcinoma with mixed differentiation","type":"exact"},{"name":"pancreatic mixed neuroendocrine-nonneuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0044727","xrefs":{"Monarch":{"xref_id":"0044727"}}}


id: GO:0006934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of accumulated adhesion components such as integrins from the rear of a migrating cell toward the cell front, where they are available to form new protrusions and adhesions.","definition_xrefs":["PMID:11944043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor recycling","termid":"GO:0001881"},{"relation_name":"part_of","term_name":"negative regulation of cell adhesion involved in substrate-bound cell migration","termid":"GO:0006933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-bound cell migration, adhesion receptor recycling","termid":"GO:0006934"}


id: GO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products.","definition_xrefs":["EC:3.1.22.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0140097","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"deoxyribonuclease II activity","secondary_identifiers":["MetaCyc:3.1.22.1-RXN"],"synonyms":[{"name":"DNase II activity","type":"related"},{"name":"acid DNase activity","type":"related"},{"name":"acid deoxyribonuclease activity","type":"related"},{"name":"deoxyribonucleate 3'-nucleotidohydrolase activity","type":"related"},{"name":"lysosomal DNase II activity","type":"narrow"},{"name":"pancreatic DNase II","type":"related"}],"termid":"GO:0004531"}


id: PBO:0083646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongation factor 2 (EF-2), also encoded by EFT2; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT1 has a paralog, EFT2, that arose from the whole genome duplication","termid":"PBO:0083646"}


id: PBO:0065368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin and Sec7 domain containing 3","termid":"PBO:0065368"}


id: PBO:0064619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 6 homeobox 1","termid":"PBO:0064619"}


id: PBO:0063714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5 pseudogene 3","termid":"PBO:0063714"}


id: GO:0120058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of small intestinal transit","termid":"GO:0120057"},{"relation_name":"positively_regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of small intestinal transit","synonyms":[{"name":"positive regulation of small bowel transit","type":"exact"},{"name":"positive regulation of small intestine transit","type":"exact"}],"termid":"GO:0120058"}


id: GO:0050549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-cyclohexylformamide + H+ = cyclohexyl isocyanide + H2O.","definition_xrefs":["EC:4.2.1.103","RHEA:18197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"cyclohexyl-isocyanide hydratase activity","secondary_identifiers":["MetaCyc:4.2.1.103-RXN","UM-BBD_reactionID:r1029","KEGG_REACTION:R05771"],"synonyms":[{"name":"N-cyclohexylformamide hydro-lyase (cyclohexyl-isocyanide-forming)","type":"related"},{"name":"N-cyclohexylformamide hydro-lyase activity","type":"related"},{"name":"isonitrile hydratase activity","type":"related"}],"termid":"GO:0050549"}


id: GO:0047885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesol = 2-cis,6-trans-farnesol.","definition_xrefs":["EC:5.2.1.9","RHEA:13401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"farnesol 2-isomerase activity","secondary_identifiers":["MetaCyc:FARNESOL-2-ISOMERASE-RXN","KEGG_REACTION:R03265"],"synonyms":[{"name":"2-trans,6-trans-farnesol 2-cis-trans-isomerase activity","type":"related"},{"name":"farnesol isomerase activity","type":"related"}],"termid":"GO:0047885"}


id: GO:0019390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete glucuronoside biosynthetic process (obsolete GO:0019390)","synonyms":[{"name":"glucuronide biosynthesis","type":"exact"},{"name":"glucuronide biosynthetic process","type":"exact"},{"name":"glucuronoside anabolism","type":"exact"},{"name":"glucuronoside biosynthesis","type":"exact"},{"name":"glucuronoside formation","type":"exact"},{"name":"glucuronoside synthesis","type":"exact"}],"termid":"GO:0019390"}


id: PR:Q9UTJ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphomannomutase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01572","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.07","secondary_identifiers":["UniProtKB:Q9UTJ2"],"synonyms":[{"name":"PMM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PMM1","type":"exact"}],"termid":"PR:Q9UTJ2"}


id: MONDO:0100246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing migraines with or without aura.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to","secondary_identifiers":["OMIMPS:157300"],"synonyms":[{"name":"migraine with or without aura, susceptibility","type":"exact"},{"name":"migraine with or without aura, susceptibility to","type":"exact"}],"termid":"MONDO:0100246","xrefs":{"Monarch":{"xref_id":"0100246"}}}


id: GO:0071923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of a process in which a cohesin complex is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:lb","GOC:mah","PMID:17113138"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cohesin loading (obsolete GO:0071923)","synonyms":[{"name":"negative regulation of cohesin association with chromatin","type":"exact"},{"name":"negative regulation of cohesin localisation to chromatin","type":"exact"},{"name":"negative regulation of cohesin localization to chromatin","type":"related"}],"termid":"GO:0071923"}


id: MONDO:0019689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete perlecan-related bone disorder (obsolete MONDO:0019689)","secondary_identifiers":["Orphanet:93424"],"termid":"MONDO:0019689","xrefs":{"Monarch":{"xref_id":"0019689"}}}


id: GO:0045904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translational termination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational termination","termid":"GO:0006449"},{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"negatively_regulates","term_name":"translational termination","termid":"GO:0006415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translational termination","synonyms":[{"name":"down regulation of translational termination","type":"exact"},{"name":"down-regulation of translational termination","type":"exact"},{"name":"downregulation of translational termination","type":"exact"},{"name":"inhibition of translational termination","type":"narrow"}],"termid":"GO:0045904"}


id: MONDO:0024238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the telencephalon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"cerebral degeneration","secondary_identifiers":["MEDGEN:56343","ICD9:331.9","UMLS:C0154671","SCTID:418143002"],"synonyms":[{"name":"cerebral degeneration","type":"exact"},{"name":"neurodegenerative disease of telencephalon","type":"exact"},{"name":"telencephalon neurodegenerative disease","type":"exact"}],"termid":"MONDO:0024238","xrefs":{"Monarch":{"xref_id":"0024238"}}}


id: FYPO:0002449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer signal recognition particles (SRPs) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"signal recognition particles present in decreased numbers","synonyms":[{"name":"SRPs present in decreased numbers","type":"exact"},{"name":"decreased level of SRPs","type":"related"},{"name":"decreased signal recognition particle formation during vegetative growth","type":"related"},{"name":"fewer signal recognition particles present during vegetative growth","type":"exact"},{"name":"signal recognition particles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"signal recognition particles present in decreased numbers during vegetative growth","type":"exact"},{"name":"signal recognition particles present in reduced numbers","type":"exact"}],"termid":"FYPO:0002449"}


id: PBO:0081517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 426","termid":"PBO:0081517"}


id: PR:O94415
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04968","PANTHER:PTHR11815:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.08","secondary_identifiers":["UniProtKB:O94415"],"synonyms":[{"name":"SCS-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SUCLA2","type":"exact"},{"name":"succinyl-CoA synthetase beta chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94415"}


id: PBO:0064859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R15B and PIK3C2B antisense RNA 1","termid":"PBO:0064859"}


id: PBO:0090769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex subunit Hip4","termid":"PBO:0090769"}


id: PBO:0042626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 2A","termid":"PBO:0042626"}


id: PBO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRACILE syndrome","termid":"PBO:0001674"}


id: GO:0009165
data:
  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id: FYPO:0006511
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id: PBO:0047987
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id: PBO:0111818
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  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase-like hydrolase","termid":"PBO:0111818"}


id: PBO:0046570
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 12","termid":"PBO:0046570"}


id: GO:1905508
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id: GO:0007460
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id: PBO:0072647
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhotekin","termid":"PBO:0072647"}


id: MONDO:0016764
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id: GO:0030859
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id: PBO:0001039
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  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Atf1","termid":"PBO:0001039"}


id: PBO:0091283
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  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergently oriented to functionally related gene","termid":"PBO:0091283"}


id: PBO:0077697
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id: GO:0060759
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id: FYECO:0000431
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id: GO:0071251
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id: GO:0043545
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor metabolic process","synonyms":[{"name":"Moco metabolic process","type":"exact"},{"name":"Moco metabolism","type":"exact"},{"name":"molybdopterin cofactor metabolism","type":"exact"}],"termid":"GO:0043545"}


id: PBO:0059628
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id: PBO:0047196
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 215 member A","termid":"PBO:0047196"}


id: GO:0033606
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id: PBO:0048884
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 3, pseudogene","termid":"PBO:0048884"}


id: MOD:01716
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-126 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"},{"relation_name":"derives_from","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"cysTMT6plex reporter fragment","type":"exact"}],"termid":"MOD:01716"}


id: PBO:0070557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 23","termid":"PBO:0070557"}


id: GO:0044796
data:
  {"annotated_genes":["SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043626"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of increasing the processivity of nucleotide polymerization by DNA polymerase as a part of DNA replication.","definition_xrefs":["GOC:bhm","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase processivity factor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044796","terms_by_termid":{"GO:0043626":null}}


id: GO:0048370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the lateral mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"lateral mesoderm morphogenesis","termid":"GO:0048369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesoderm formation","secondary_identifiers":["Reactome:R-HSA-9758920"],"synonyms":[{"name":"lateral plate mesoderm biosynthesis","type":"exact"},{"name":"lateral plate mesoderm formation","type":"exact"}],"termid":"GO:0048370"}


id: GO:0050699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a WW domain of a protein, a small module composed of 40 amino acids and plays a role in mediating protein-protein interactions via proline-rich regions.","definition_xrefs":["PMID:14531730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"WW domain binding","termid":"GO:0050699"}


id: PBO:0065845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 1","termid":"PBO:0065845"}


id: PATO:0000338
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000338 compatability value (obsolete PATO:0000338)","termid":"PATO:0000338"}


id: MONDO:0014828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency-centromeric instability-facial anomalies syndrome in which the cause of the disease is a mutation in the CDCA7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency-centromeric instability-facial anomalies syndrome","termid":"MONDO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0006025"],"is_obsolete":false,"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 3","secondary_identifiers":["OMIM:616910","DOID:0090010","MEDGEN:934766","UMLS:C4310799","GARD:16168"],"synonyms":[{"name":"CDCA7 immunodeficiency-centromeric instability-facial anomalies syndrome","type":"exact"},{"name":"ICF syndrome 3","type":"exact"},{"name":"ICF3","type":"related"},{"name":"immunodeficiency-centromeric instability-FACIAL anomalies syndrome 3","type":"related"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome 3","type":"exact"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome type 3","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome caused by mutation in CDCA7","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome type 3","type":"exact"}],"termid":"MONDO:0014828","xrefs":{"Monarch":{"xref_id":"0014828"}}}


id: MONDO:0016313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete renal cell carcinoma (obsolete MONDO:0016313)","termid":"MONDO:0016313","xrefs":{"Monarch":{"xref_id":"0016313"}}}


id: PBO:0025427
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlysinemia","termid":"PBO:0025427"}


id: GO:0034409
data:
  {"annotated_genes":["SJAG_03587","SJAG_04666","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[91929,87036],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascospore wall beta-glucan metabolic process","termid":"GO:0034408"},{"relation_name":"is_a","term_name":"fungal-type cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0071969"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0005975","GO:0071554","GO:0030437","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"ascospore wall (1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall 1,3-beta-D-glucan metabolic process","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan metabolic process","type":"broad"},{"name":"ascospore wall 1,3-beta-glucan metabolism","type":"exact"},{"name":"ascospore wall beta-1,3 glucan metabolic process","type":"exact"},{"name":"ascospore wall beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0034409","terms_by_termid":{"GO:0034413":null,"GO:0140748":null}}


id: GO:0030807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chemical reactions and pathways resulting in the breakdown of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclic nucleotide catabolic process (obsolete GO:0030807)","synonyms":[{"name":"activation of cyclic nucleotide catabolic process","type":"narrow"},{"name":"positive regulation of cyclic nucleotide breakdown","type":"exact"},{"name":"positive regulation of cyclic nucleotide catabolism","type":"exact"},{"name":"positive regulation of cyclic nucleotide degradation","type":"exact"},{"name":"stimulation of cyclic nucleotide catabolic process","type":"narrow"},{"name":"up regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"up-regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"upregulation of cyclic nucleotide catabolic process","type":"exact"}],"termid":"GO:0030807"}


id: GO:1900221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid-beta clearance.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid-beta clearance","synonyms":[{"name":"regulation of beta-amyloid clearance","type":"exact"}],"termid":"GO:1900221"}


id: GO:0035426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information between the extracellular matrix and a cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extracellular matrix-cell signaling","synonyms":[{"name":"cell-extracellular matrix signalling","type":"exact"},{"name":"extracellular matrix-cell signalling","type":"exact"}],"termid":"GO:0035426"}


id: GO:0035203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lamellocyte differentiation. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"is_a","term_name":"regulation of hemopoiesis","termid":"GO:1903706"},{"relation_name":"regulates","term_name":"lamellocyte differentiation","termid":"GO:0035171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lamellocyte differentiation","termid":"GO:0035203"}


id: PBO:0084587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCR080W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCR081W","termid":"PBO:0084587"}


id: GO:0008898
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98031],"is_not":false,"summary":null,"term":"GO:0008898"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine.","definition_xrefs":["RHEA:21820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"S-adenosylmethionine-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine-homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"adenosylmethionine transmethylase activity","type":"related"},{"name":"adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine transmethylase activity","type":"related"}],"termid":"GO:0008898","terms_by_termid":{"GO:0008898":null}}


id: PBO:0080945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 1","termid":"PBO:0080945"}


id: GO:0008901
data:
  {"annotated_genes":["SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114210],"is_not":false,"summary":null,"term":"GO:0008901"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2.","definition_xrefs":["EC:1.12.7.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor","termid":"GO:0016699"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ferredoxin hydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HYDROG-RXN","GO:0016948","GO:0016949","GO:0016951","RHEA:17445","GO:0016950"],"synonyms":[{"name":"H(2) oxidizing hydrogenase activity","type":"broad"},{"name":"H(2) producing hydrogenase activity","type":"broad"},{"name":"H2 oxidizing hydrogenase","type":"broad"},{"name":"H2 producing hydrogenase","type":"broad"},{"name":"Ni-Fe hydrogenase activity","type":"narrow"},{"name":"Ni-Fe-Se hydrogenase activity","type":"narrow"},{"name":"[Fe] hydrogenase activity","type":"exact"},{"name":"[Fe] hydrogenase gamma","type":"related"},{"name":"bidirectional hydrogenase activity","type":"broad"},{"name":"hydrogen-lyase activity","type":"broad"},{"name":"hydrogen:ferredoxin oxidoreductase activity","type":"exact"},{"name":"hydrogenase (ferredoxin) activity","type":"related"},{"name":"hydrogenase I","type":"related"},{"name":"hydrogenase II","type":"related"},{"name":"hydrogenase activity","type":"broad"},{"name":"hydrogenlyase activity","type":"broad"},{"name":"iron hydrogenase activity","type":"narrow"},{"name":"iron-only hydrogenase activity","type":"narrow"},{"name":"nickel hydrogenase activity","type":"narrow"},{"name":"nickel-iron hydrogenase activity","type":"narrow"},{"name":"nickel-iron-selenium hydrogenase activity","type":"narrow"},{"name":"uptake hydrogenase activity","type":"broad"}],"termid":"GO:0008901","terms_by_termid":{"GO:0008901":null}}


id: MONDO:0031007
data:
  {"annotated_genes":["SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85108],"is_not":false,"summary":null,"term":"MONDO:0031007"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"NMNAT1-related retinopathy","termid":"MONDO:0800101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia, sensorineural hearing loss, impaired intellectual development, and leber congenital amaurosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18025","OMIM:619260","DOID:0112290","UMLS:C5543257","Orphanet:611207","MEDGEN:1780157"],"synonyms":[{"name":"SHILCA","type":"exact"},{"name":"SHILCA syndrome","type":"exact"},{"name":"spondyloepiphyseal dysplasia, sensorineural hearing loss, intellectual developmental disorder, and Leber congenital amaurosis","type":"exact"}],"termid":"MONDO:0031007","terms_by_termid":{"MONDO:0031007":null},"xrefs":{"Monarch":{"xref_id":"0031007"}}}


id: PR:O60185
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methylthioribose-1-phosphate isomerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.10c","secondary_identifiers":["UniProtKB:O60185"],"synonyms":[{"name":"M1Pi (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MTR-1-P isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-methyl-5-thioribose-1-phosphate isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MRI1","type":"exact"},{"name":"translation initiation factor eIF-2B subunit alpha/beta/delta-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60185"}


id: GO:1902602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of aluminium ions across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion transmembrane transport","termid":"GO:0098660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"aluminum ion transmembrane transport","synonyms":[{"name":"aluminium ion transmembrane transport","type":"exact"},{"name":"aluminium transmembrane transport","type":"broad"},{"name":"aluminum transmembrane transport","type":"broad"}],"termid":"GO:1902602"}


id: GO:0036173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a thiosulfate, a sulfur oxide that has formula O3S2.","definition_xrefs":["PMID:2188959","GOC:db"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thiosulfate binding","termid":"GO:0036173"}


id: GO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA exon ligation process that rejoins two exons of a pre-tRNA which has had the intron removed.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exon ligation","termid":"GO:0000378"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA exon ligation","termid":"GO:0000968"}


id: PBO:0069493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 760, pseudogene","termid":"PBO:0069493"}


id: PBO:0061031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninjurin 2","termid":"PBO:0061031"}


id: GO:1905195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATPase activity, uncoupled.","definition_xrefs":["PMID:26545917","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ATPase activity, uncoupled (obsolete GO:1905195)","synonyms":[{"name":"regulation of adenylpyrophosphatase activity","type":"related"}],"termid":"GO:1905195"}


id: GO:0043202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the lysosomal membrane.","definition_xrefs":["PMID:15213228","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"lysosomal lumen","termid":"GO:0043202"}


id: GO:0034609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Insertion of the male copulatory spicules into the hermaphrodite. Spicule insertion behavior initiates when the male cloaca contacts the vulva. During most mating encounters, the spicule tips will prod the vulva continuously until they partially penetrate, which then causes the protractors to contract completely so that the spicules extend through the vulva.","definition_xrefs":["PMID:18050467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spicule insertion","termid":"GO:0034609"}


id: MOD:00449
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:11999733","PubMed:12175151","PubMed:11857757","Unimod:56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetate labeling reagent (N-term) (heavy form, +3amu)","synonyms":[{"name":"Acetate labeling reagent (N-term & K) (heavy form, +3amu)","type":"related"},{"name":"Acetyl:2H(3)","type":"related"}],"termid":"MOD:00449"}


id: FYPO:0008272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3 binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type). The affected gene product may be encoded by the mutated gene, or by a different gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone binding","termid":"FYPO:0008271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3 binding","termid":"FYPO:0008272"}


id: GO:0030710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of border follicle cell delamination","synonyms":[{"name":"regulation of border cell delamination","type":"broad"}],"termid":"GO:0030710"}


id: PBO:0068560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 11, pseudogene","termid":"PBO:0068560"}


id: GO:0019548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including spermine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"arginine catabolic process to spermine","secondary_identifiers":["MetaCyc:ARGSPECAT-PWY"],"synonyms":[{"name":"arginine breakdown to spermine","type":"exact"},{"name":"arginine degradation to spermine","type":"exact"}],"termid":"GO:0019548"}


id: PBO:0109621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 12B (pseudogene)","termid":"PBO:0109621"}


id: MONDO:0012038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speech-sound disorder","secondary_identifiers":["MESH:C563928","UMLS:C4019167","MEDGEN:866372","OMIM:608445"],"synonyms":[{"name":"SSD","type":"related"},{"name":"speech-sound disorder","type":"exact"}],"termid":"MONDO:0012038","xrefs":{"Monarch":{"xref_id":"0012038"}}}


id: GO:0055006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac cell over time, from its formation to the mature state. A cardiac cell is a cell that will form part of the cardiac organ of an individual.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac cell development","synonyms":[{"name":"cardiocyte development","type":"exact"},{"name":"heart cell development","type":"related"}],"termid":"GO:0055006"}


id: PBO:0075465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 17","termid":"PBO:0075465"}


id: PBO:0065725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader-Willi region non-protein coding RNA 2","termid":"PBO:0065725"}


id: GO:0140252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the postsynapse.","definition_xrefs":["PMID:17062563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation protein catabolic process at synapse","termid":"GO:0140250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation protein catabolic process at postsynapse","termid":"GO:0140252"}


id: FYPO:0000044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription by glucose (glucose repression) is abnormal. For example, specific genes that are normally not transcribed in the presence of glucose may be transcribed in the mutant.","definition_xrefs":["PomBase:mah","GO:0045014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"},{"relation_name":"is_a","term_name":"abnormal cellular response to nutrient","termid":"FYPO:0001484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abnormal negative regulation of transcription by glucose","secondary_identifiers":["FYPO:0000210"],"synonyms":[{"name":"abnormal glucose repression","type":"exact"},{"name":"abnormal glucose repression during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of transcription by glucose during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of transcription by glucose during vegetative growth","type":"exact"},{"name":"glucose repression defects","type":"exact"},{"name":"glucose-insensitive transcription","type":"related"}],"termid":"FYPO:0000044"}


id: PBO:0067277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 356, pseudogene","termid":"PBO:0067277"}


id: MONDO:0003955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, usually solitary, well circumscribed multicystic neoplasm that arises from the breast and typically affects young females. The cysts are lined by papillary proliferations that contain epithelial and myoepithelial layers. In a minority of cases, atypia may be present.","definition_xrefs":["NCIT:C9503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal breast papillomatosis","termid":"MONDO:0004253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile breast papillomatosis","secondary_identifiers":["DOID:6641","MEDGEN:233588","SCTID:708518001","UMLS:C1334303"],"synonyms":[{"name":"Swiss cheese disease","type":"exact"},{"name":"breast juvenile papillomatosis","type":"related"},{"name":"juvenile breast papillomatosis","type":"exact"},{"name":"juvenile papillomatosis of breast","type":"exact"},{"name":"juvenile papillomatosis of the breast","type":"exact"}],"termid":"MONDO:0003955","xrefs":{"Monarch":{"xref_id":"0003955"}}}


id: PBO:0061817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 7 Y-linked","termid":"PBO:0061817"}


id: PR:Q10270
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoadenosine phosphosulfate reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00955","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoadenosine phosphosulfate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.06","secondary_identifiers":["UniProtKB:Q10270"],"synonyms":[{"name":"3'-phosphoadenylylsulfate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAPS reductase, thioredoxin dependent (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAdoPS reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cysH","type":"exact"}],"termid":"PR:Q10270"}


id: FYPO:0008031
data:
  {"alleles_by_uniquename":{"SJAG_02860:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02860","name":"wcs1delta","uniquename":"SJAG_02860:allele-1"},"SJAG_05242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05242","name":"wcs2delta","uniquename":"SJAG_05242:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118680,118681],"is_not":false,"summary":null,"term":"FYPO:0008031"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cellular response to blue light stimulus is abnormal.","definition_xrefs":["PMID:23873862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02860":null,"SJAG_05242":null},"genotype_count":2,"genotypes_by_uniquename":{"wcs1delta":{"display_name":"wcs1delta","display_uniquename":"wcs1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02860:allele-1","expression":"Null"}]}]},"wcs2delta":{"display_name":"wcs2delta","display_uniquename":"wcs2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05242:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"abnormal blue light response","references_by_uniquename":{"PMID:23873862":null},"single_locus_annotated_genes":["SJAG_02860","SJAG_05242"],"single_locus_genotype_uniquenames":["wcs1delta","wcs2delta"],"synonyms":[{"name":"abnormal reponse to blue light","type":"exact"},{"name":"defective blue light response","type":"exact"}],"termid":"FYPO:0008031","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0008031":null,"FYPO_EXT:0000001":null}}


id: PR:O94408
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13829:SF2","PRO:DNx","OMA:SCHPO04961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.01c","secondary_identifiers":["UniProtKB:O94408"],"synonyms":[{"name":"Spom972h-LSM2","type":"exact"}],"termid":"PR:O94408"}


id: MONDO:0019254
data:
  {"annotated_genes":["SJAG_00964","SJAG_04495","SJAG_02850","SJAG_02369","SJAG_03660","SJAG_00605","SJAG_01359","SJAG_02796","SJAG_04192","SJAG_01859","SJAG_04882","SJAG_03811","SJAG_04334","SJAG_03797","SJAG_02009","SJAG_00839","SJAG_06634","SJAG_03247","SJAG_02107","SJAG_04681","SJAG_00461"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013869"},{"annotations":[84994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007068"},{"annotations":[86130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012099"},{"annotations":[86591,86590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011534"},{"annotations":[85715,85714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010699"},{"annotations":[85543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014719"},{"annotations":[84645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014647"},{"annotations":[84687,84685,84686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013046"},{"annotations":[86762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010392"},{"annotations":[85372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009865"},{"annotations":[85209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[85713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86021,86022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[85696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010299"},{"annotations":[85695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010298"},{"annotations":[86794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[84671,84670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[85995,85996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[85941,85942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"},{"annotations":[86769,86770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010395"},{"annotations":[86015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013171"},{"annotations":[85130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[85322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_00964":null,"SJAG_01359":null,"SJAG_01859":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02850":null,"SJAG_03247":null,"SJAG_03660":null,"SJAG_03797":null,"SJAG_03811":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04681":null,"SJAG_04882":null,"SJAG_06634":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of purine or pyrimidine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:48263","GARD:18980","Orphanet:79224","UMLS:C0034139","ICD9:277.2","MedDRA:10037546","DOID:653","MESH:D011686"],"synonyms":[{"name":"disorder of purine or pyrimidine metabolism","type":"related"},{"name":"inborn errors of purine-pyrimidine metabolism","type":"exact"},{"name":"inborn purine-pyrimidine metabolic disorder","type":"exact"},{"name":"purine-pyrimidine metabolic disorder","type":"related"}],"termid":"MONDO:0019254","terms_by_termid":{"MONDO:0007068":null,"MONDO:0007453":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009865":null,"MONDO:0009950":null,"MONDO:0010298":null,"MONDO:0010299":null,"MONDO:0010392":null,"MONDO:0010395":null,"MONDO:0010699":null,"MONDO:0011236":null,"MONDO:0011534":null,"MONDO:0012099":null,"MONDO:0013046":null,"MONDO:0013171":null,"MONDO:0013275":null,"MONDO:0013869":null,"MONDO:0014221":null,"MONDO:0014647":null,"MONDO:0014674":null,"MONDO:0014719":null,"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0019254"}}}


id: MONDO:0019014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mutilating palmoplantar keratoderma with periorificial keratotic plaques (obsolete MONDO:0019014)","termid":"MONDO:0019014","xrefs":{"Monarch":{"xref_id":"0019014"}}}


id: GO:1904683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metalloendopeptidase activity.","definition_xrefs":["GOC:rph","GOC:TermGenie","PMID:18591254","GOC:BHF","GOC:BHF_miRNA","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metalloendopeptidase activity","synonyms":[{"name":"regulation of metalloendoprotease activity","type":"narrow"},{"name":"regulation of metalloendoproteinase activity","type":"narrow"}],"termid":"GO:1904683"}


id: PBO:0029206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_hygromycin_B","termid":"PBO:0029206"}


id: GO:0016184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Return of a vesicle from the postsynaptic membrane to presynaptic membrane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle retrieval (obsolete GO:0016184)","synonyms":[{"name":"synaptic vesicle retrieval","type":"exact"}],"termid":"GO:0016184"}


id: PBO:0081859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 791","termid":"PBO:0081859"}


id: MONDO:0022140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charles Bonnet syndrome (CBS) refers to the presenceof visual hallucinations in individuals with visual acuity loss without havingpsychosis or dementia. The condition is likely caused by the brain continuing to interpret images, even in their absence. Underlying conditions of vision loss associated with Charles Bonnet syndrome are diverse (including conditions such as macular degeneration and stroke) and may affect the eye, optic nerve, or brain. Hallucinations often resolve if the underlying vision deficit is corrected and can also remit in some individuals with static or progressive vision loss. Treatment is individualized.","definition_xrefs":["GARD:0010343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charles bonnet syndrome","secondary_identifiers":["MESH:D000075562","SCTID:193756007","UMLS:C0339731","MEDGEN:137926"],"synonyms":[{"name":"CBS","type":"related"},{"name":"charles bonnet syndrome","type":"exact"}],"termid":"MONDO:0022140","xrefs":{"Monarch":{"xref_id":"0022140"}}}


id: FYPO:0001683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle assembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"mitotic spindle absent from cell","termid":"FYPO:0002018"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly","termid":"FYPO:0000177"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0000337","FYPO:0001320","FYPO:0000054","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitotic spindle assembly","synonyms":[{"name":"abolished mitotic spindle assembly during vegetative growth","type":"exact"},{"name":"abolished spindle assembly during mitotic cell cycle","type":"related"},{"name":"spindle assembly involved in mitosis abolished","type":"exact"}],"termid":"FYPO:0001683"}


id: MONDO:0001030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus, stable condition","secondary_identifiers":["MEDGEN:509801","DOID:10428","SCTID:193844000","UMLS:C0155131","ICD9:371.61"],"synonyms":[{"name":"stable condition keratoconus","type":"exact"}],"termid":"MONDO:0001030","xrefs":{"Monarch":{"xref_id":"0001030"}}}


id: MONDO:0010176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joubert syndrome with orofaciodigital defect (or oral-facial-digital syndrome type 6, OFD6) is a very rare subtype of Joubert syndrome and related disorders (JSRD) characterized by the neurological features of JS associated with orofacial anomalies and often polydactyly.","definition_xrefs":["Orphanet:2754"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"Joubert syndrome 17","termid":"MONDO:0013824"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0020022"],"is_obsolete":false,"name":"orofaciodigital syndrome type 6","secondary_identifiers":["NCIT:C124841","DOID:0060376","SCTID:721873007","OMIM:277170","MEDGEN:411200","GARD:4412","MESH:C536531","UMLS:C2745997"],"synonyms":[{"name":"Joubert syndrome with oral-facial-digital syndrome","type":"exact"},{"name":"Joubert syndrome with orofaciodigital defect","type":"exact"},{"name":"OFD6","type":"exact"},{"name":"Ofds 6","type":"related"},{"name":"Varadi syndrome","type":"exact"},{"name":"Varadi-Papp syndrome","type":"exact"},{"name":"Váradi syndrome","type":"related"},{"name":"Váradi-Papp syndrome","type":"related"},{"name":"oral-Facial-digital syndrome, type 6","type":"related"},{"name":"oral-facial-digital syndrome type 6","type":"exact"},{"name":"orofaciodigital syndrome 6","type":"related"},{"name":"orofaciodigital syndrome VI","type":"exact"},{"name":"orofaciodigital syndrome type 6","type":"exact"},{"name":"polydactyly - cleft lip/palate - psychomotor retardation","type":"related"},{"name":"polydactyly cleft lip palate psychomotor retardation","type":"related"},{"name":"polydactyly, cleft Lip/palate or lingual lump, and psychomotor retardation","type":"related"},{"name":"polydactyly-cleft lip/palate-psychomotor retardation syndrome","type":"exact"}],"termid":"MONDO:0010176","xrefs":{"Monarch":{"xref_id":"0010176"}}}


id: MONDO:0003820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ovarian teratoma which may be cystic, composed entirely of well differentiated, adult-type tissues, without evidence of fetal-type tissues.","definition_xrefs":["NCIT:C8112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature teratoma","termid":"MONDO:0003517"},{"relation_name":"is_a","term_name":"ovarian biphasic or triphasic teratoma","termid":"MONDO:0003821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature ovarian teratoma","secondary_identifiers":["ONCOTREE:OMT","MEDGEN:233672","UMLS:C1334637","DOID:6231"],"synonyms":[{"name":"mature ovarian teratoma","type":"exact"},{"name":"mature teratoma","type":"related"},{"name":"mature teratoma of ovary","type":"exact"},{"name":"mature teratoma of the ovary","type":"related"},{"name":"ovary mature teratoma","type":"exact"}],"termid":"MONDO:0003820","xrefs":{"Monarch":{"xref_id":"0003820"}}}


id: PBO:0056989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR31 host gene","termid":"PBO:0056989"}


id: PBO:0075989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stanniocalcin 1","termid":"PBO:0075989"}


id: PBO:0083107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ-like chaperone required for nuclear membrane fusion during mating; localizes to the ER membrane; exhibits genetic interactions with KAR2","termid":"PBO:0083107"}


id: PBO:0071605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 23","termid":"PBO:0071605"}


id: PBO:0056959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 20b","termid":"PBO:0056959"}


id: PBO:0078430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 1-1","termid":"PBO:0078430"}


id: GO:2001093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a galactotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"galactotriose transport","termid":"GO:2001093"}


id: GO:0044603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenylyl-protein+ H2O = adenylate + protein; mediates the removal of an adenylyl (adenosine 5'-monophosphate; AMP group) from specific residues of target proteins.","definition_xrefs":["PMID:21734656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0140096","GO:0016788"],"is_obsolete":false,"name":"protein adenylylhydrolase activity","synonyms":[{"name":"protein deAMPylase activity","type":"exact"},{"name":"protein deAMPylation activity","type":"exact"}],"termid":"GO:0044603"}


id: GO:0071507
data:
  {"annotated_genes":["SJAG_01345","SJAG_00993","SJAG_02923","SJAG_03453","SJAG_00781","SJAG_02233","SJAG_03340","SJAG_00990","SJAG_01978","SJAG_01718","SJAG_02486","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88746,91696,92827,95880,96547,105746],"is_not":false,"summary":null,"term":"GO:0071507"},{"annotations":[106604],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0180040"},{"annotations":[90360,103190,115031,87658,114068],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0062038"}]},"cv_name":"biological_process","definition":"A MAPK cascade containing at least the Fus3 MAP kinase. It starts with the activation of Ste20, a MAP4K, which activates Ste11, a MAP3K, which in turn activate Ste7, a MAP2K, which activates Fus3. The kinases in each tier phosphorylate and activate the kinases in the downstream tier. This MAPK cascade is triggered by a pheromone activating its G protein-coupled receptor, and results in cellular responses that lead to conjugation with cellular fusion.","definition_xrefs":["PMID:17604854","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAPK cascade","termid":"GO:0000165"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"},{"relation_name":"part_of","term_name":"pheromone-dependent signal transduction involved in conjugation with cellular fusion","termid":"GO:0000750"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00781":null,"SJAG_00845":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02233":null,"SJAG_02486":null,"SJAG_02923":null,"SJAG_03340":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0000747","GO:0008150"],"is_obsolete":false,"name":"pheromone response MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Fus3 signaling cascade","type":"narrow"},{"name":"MAPK cascade involved in conjugation with cellular fusion","type":"exact"},{"name":"MAPK signaling in response to pheromone","type":"related"},{"name":"MAPKKK cascade involved in conjugation with cellular fusion","type":"exact"},{"name":"MAPKKK cascade involved in mating response","type":"related"},{"name":"conjugation with cellular fusion, MAPKKK cascade","type":"exact"},{"name":"pheromone MAPK module","type":"related"}],"termid":"GO:0071507","terms_by_termid":{"GO:0062038":null,"GO:0071507":null,"GO:0180040":null}}


id: MONDO:0015745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-polymicrogyria-corpus callosum agenesis syndrome is a rare, genetic, central nervous system malformation syndrome characterized by marked prenatal-onset microcephaly, severe motor delay with hypotonia, bilateral polymicrogyria, corpus callosum agenesis, ventricular dilation, small cerebellum and early lethality.","definition_xrefs":["Orphanet:171703"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-polymicrogyria-corpus callosum agenesis syndrome","secondary_identifiers":["UMLS:C4750772","GARD:20125","MEDGEN:1653942"],"termid":"MONDO:0015745","xrefs":{"Monarch":{"xref_id":"0015745"}}}


id: PBO:0041535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 58","termid":"PBO:0041535"}


id: PBO:0079515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthetase","termid":"PBO:0079515"}


id: PBO:0080358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 13 pseudogene","termid":"PBO:0080358"}


id: PBO:0045409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 11","termid":"PBO:0045409"}


id: PBO:0066787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 86","termid":"PBO:0066787"}


id: FYPO:0007711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:33723569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal number of Ssb1 foci","synonyms":[{"name":"normal number of RPA foci","type":"exact"},{"name":"normal number of Rad11 foci","type":"exact"},{"name":"normal number of Rpa1 foci","type":"exact"},{"name":"normal number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"normal number of Ssb1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0007711"}


id: PBO:0060507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 6, pseudogene","termid":"PBO:0060507"}


id: MONDO:0002321
data:
  {"annotated_genes":["SJAG_04178","SJAG_02119","SJAG_00773","SJAG_02016","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"},{"annotations":[86472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008086"},{"annotations":[86565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013337"},{"annotations":[84607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024309"},{"annotations":[85342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013634"},{"annotations":[86704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010378"}]},"cv_name":"mondo","definition":"Inflammation or degeneration of the sensory nerves.","definition_xrefs":["NCIT:C3501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_02016":null,"SJAG_02119":null,"SJAG_02305":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"sensory peripheral neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:356.2","ICD9:356.9","UMLS:C0151313","SCTID:95662005","DOID:2491","MEDGEN:101791"],"synonyms":[{"name":"peripheral neuropathy of sensory nerve","type":"exact"},{"name":"peripheral sensory neuropathy","type":"exact"},{"name":"sensory nerve peripheral neuropathy","type":"exact"},{"name":"sensory neuropathy","type":"exact"}],"termid":"MONDO:0002321","terms_by_termid":{"MONDO:0008086":null,"MONDO:0010378":null,"MONDO:0013337":null,"MONDO:0013584":null,"MONDO:0013634":null,"MONDO:0024309":null},"xrefs":{"Monarch":{"xref_id":"0002321"}}}


id: GO:1900733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of polyketide biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of polyketide biosynthetic process","termid":"GO:1900732"},{"relation_name":"negatively_regulates","term_name":"polyketide biosynthetic process","termid":"GO:0030639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of polyketide biosynthetic process","synonyms":[{"name":"down regulation of polyketide anabolism","type":"exact"},{"name":"down regulation of polyketide biosynthesis","type":"exact"},{"name":"down regulation of polyketide biosynthetic process","type":"exact"},{"name":"down regulation of polyketide formation","type":"exact"},{"name":"down regulation of polyketide synthesis","type":"exact"},{"name":"down-regulation of polyketide anabolism","type":"exact"},{"name":"down-regulation of polyketide biosynthesis","type":"exact"},{"name":"down-regulation of polyketide biosynthetic process","type":"exact"},{"name":"down-regulation of polyketide formation","type":"exact"},{"name":"down-regulation of polyketide synthesis","type":"exact"},{"name":"downregulation of polyketide anabolism","type":"exact"},{"name":"downregulation of polyketide biosynthesis","type":"exact"},{"name":"downregulation of polyketide biosynthetic process","type":"exact"},{"name":"downregulation of polyketide formation","type":"exact"},{"name":"downregulation of polyketide synthesis","type":"exact"},{"name":"inhibition of polyketide anabolism","type":"exact"},{"name":"inhibition of polyketide biosynthesis","type":"exact"},{"name":"inhibition of polyketide biosynthetic process","type":"narrow"},{"name":"inhibition of polyketide formation","type":"exact"},{"name":"inhibition of polyketide synthesis","type":"exact"},{"name":"negative regulation of polyketide anabolism","type":"exact"},{"name":"negative regulation of polyketide biosynthesis","type":"exact"},{"name":"negative regulation of polyketide formation","type":"exact"},{"name":"negative regulation of polyketide synthesis","type":"exact"}],"termid":"GO:1900733"}


id: PBO:0026841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0026841"}


id: PBO:0065155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 5 pseudogene 1","termid":"PBO:0065155"}


id: PBO:0028907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_cellular_response_to_calcium_ion","termid":"PBO:0028907"}


id: PBO:0061584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin 4","termid":"PBO:0061584"}


id: PBO:0039822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor guanine nucleotide exchange factor 2","termid":"PBO:0039822"}


id: MONDO:0007824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incisors, lower central, absence of","secondary_identifiers":["UMLS:C1840225","MEDGEN:333512","OMIM:147330"],"synonyms":[{"name":"incisors, lower central, absence of","type":"exact"}],"termid":"MONDO:0007824","xrefs":{"Monarch":{"xref_id":"0007824"}}}


id: GO:0036035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a osteoclast from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue.","definition_xrefs":["CL:0000092","GOC:yaf","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"is_a","term_name":"bone cell development","termid":"GO:0098751"},{"relation_name":"part_of","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast development","synonyms":[{"name":"osteoclast cell development","type":"exact"}],"termid":"GO:0036035"}


id: GO:0019318
data:
  {"annotated_genes":["SJAG_02783","SJAG_00605","SJAG_01414","SJAG_04334","SJAG_03818","SJAG_00240","SJAG_03903","SJAG_02596","SJAG_01784","SJAG_03370","SJAG_01402","SJAG_00839","SJAG_00039","SJAG_00027","SJAG_02713","SJAG_04495","SJAG_02135","SJAG_02297","SJAG_05006","SJAG_02951","SJAG_06622","SJAG_03336","SJAG_03660","SJAG_02107","SJAG_04192","SJAG_02950","SJAG_03822","SJAG_03828","SJAG_00134","SJAG_02945","SJAG_06621","SJAG_02796","SJAG_02369","SJAG_03373","SJAG_01209","SJAG_02009","SJAG_01310","SJAG_02954","SJAG_00461","SJAG_02148","SJAG_02696","SJAG_03743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108852,108849,108388,103126,102870,108386,108848,104924,108850,108851,104925,94517,103949,108387,108390,108853,108854,115796,97772,108385,104926,105294,108384,108389,105295,97494,94030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[92368,99442,94031,100864,88485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006000"},{"annotations":[108356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019388"},{"annotations":[109052,113152,113159,113158,113170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006012"},{"annotations":[115282,96394,117881,96483,94032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006006"},{"annotations":[88021,114059,98229,98230,114058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[94034,88716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006013"},{"annotations":[96079],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[98533],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010906"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00039":null,"SJAG_00134":null,"SJAG_00240":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01209":null,"SJAG_01310":null,"SJAG_01402":null,"SJAG_01414":null,"SJAG_01784":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02297":null,"SJAG_02369":null,"SJAG_02596":null,"SJAG_02696":null,"SJAG_02713":null,"SJAG_02783":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03336":null,"SJAG_03370":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03743":null,"SJAG_03818":null,"SJAG_03822":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05006":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"hexose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hexose metabolism","type":"exact"}],"termid":"GO:0019318","terms_by_termid":{"GO:0006000":null,"GO:0006006":null,"GO:0006012":null,"GO:0006013":null,"GO:0010906":null,"GO:0019388":null,"GO:0019655":null,"GO:0061621":null,"GO:2001172":null}}


id: MONDO:0000663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to gain feedback about one's own condition or impairments.","definition_xrefs":["DOID:0060133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anosognosia","secondary_identifiers":["icd11.foundation:833222383","MEDGEN:536043","UMLS:C0234507"],"termid":"MONDO:0000663","xrefs":{"Monarch":{"xref_id":"0000663"}}}


id: PBO:0013004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion","termid":"PBO:0013004"}


id: PBO:0076281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse defective Rho GTPase homolog 1","termid":"PBO:0076281"}


id: PBO:0067203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 268, pseudogene","termid":"PBO:0067203"}


id: PBO:0079456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal uridylyl transferase 1, U6 snRNA-specific","termid":"PBO:0079456"}


id: PBO:0057085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181d","termid":"PBO:0057085"}


id: MONDO:0033203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"steroid-resistant nephrotic syndrome","termid":"MONDO:0044765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"nephrotic syndrome 14","secondary_identifiers":["DOID:0080265","OMIM:617575","Orphanet:506334","GARD:13818","UMLS:C4540559","MEDGEN:1617660"],"synonyms":[{"name":"NPHS14","type":"related"},{"name":"RENI syndrome","type":"exact"},{"name":"SGPL1 deficiency, steroid-resistant nephrotic syndrome type 14","type":"exact"},{"name":"SPLIS","type":"exact"},{"name":"familial steroid-resistant nephrotic syndrome with adrenal insufficiency","type":"exact"},{"name":"nephrotic syndrome 14","type":"exact"},{"name":"nephrotic syndrome, type 14","type":"exact"},{"name":"primary adrenal insufficiency-steroid-resistant nephrotic syndrome due to SGPL1 deficiency","type":"exact"},{"name":"renal, endocrine, neurologic and immune syndrome","type":"exact"},{"name":"sphingosine phosphate lyase insufficiency syndrome","type":"exact"}],"termid":"MONDO:0033203","xrefs":{"Monarch":{"xref_id":"0033203"}}}


id: PBO:0061626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 9 pseudogene 1","termid":"PBO:0061626"}


id: PBO:0030708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_replication_origin_binding","termid":"PBO:0030708"}


id: PBO:0038548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 3","termid":"PBO:0038548"}


id: MONDO:0023226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gershinibaruch Leibo syndrome","termid":"MONDO:0023226","xrefs":{"Monarch":{"xref_id":"0023226"}}}


id: PBO:0065864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB21, member RAS oncogene family","termid":"PBO:0065864"}


id: FYPO:0007779
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119053],"is_not":false,"summary":null,"term":"FYPO:0007779"}],"single_locus_phenotype":[{"annotations":[118837,119044],"is_not":false,"summary":null,"term":"FYPO:0007779"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the mycelium formed by fission yeast undergoing hyphal growth covers a larger area than normal.","definition_xrefs":["PomBase:mah","PMID:31150379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_01787":null,"SJAG_02592":null},"genotype_count":3,"genotypes_by_uniquename":{"SJAG_00124delta__sty1delta":{"display_name":"SJAG_00124delta sty1delta","display_uniquename":"SJAG_00124delta__sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00124:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0007773"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02592","SJAG_00124"],"name":"increased mycelial expansion","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787","SJAG_02592"],"single_locus_genotype_uniquenames":["pck1delta","sty1delta"],"termid":"FYPO:0007779","terms_by_termid":{"FYPO:0007779":null,"FYPO_EXT:0000002":null}}


id: GO:0035642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H3)-arginine (position 17) = S-adenosyl-L-homocysteine + (histone H3)-N-methyl-arginine (position 17). This reaction is the addition of a methyl group to the arginine residue at position 17 of histone H3.","definition_xrefs":["PMID:11341840","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0140096","GO:0008276","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H3R17 methyltransferase activity","synonyms":[{"name":"histone methylase activity (H3-R17 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-R17 specific)","type":"exact"},{"name":"histone-H3R17 methyltransferase activity","type":"exact"},{"name":"histone-arginine N-methyltransferase activity (H3-R17 specific)","type":"exact"}],"termid":"GO:0035642"}


id: MOD:01898
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["PubMed:21950656","PubMed:21568297","RESID:AA0569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated L-arginine","termid":"MOD:00783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N2,N2-dimethyl-L-arginine","synonyms":[{"name":"(2S)-5-[(diaminomethylidene)amino]-2-(dimethylamino)pentanoic acid","type":"exact"},{"name":"(2S)-5-carbamimidamido-2-(dimethylamino)pentanoic acid [tautomer]","type":"exact"},{"name":"MOD_RES N2,N2-dimethylarginine","type":"exact"},{"name":"N(alpha),N(alpha)-dimethylarginine","type":"exact"},{"name":"N2,N2-dimethyl-L-arginine","type":"exact"},{"name":"N2,N2-dimethylarginine","type":"exact"}],"termid":"MOD:01898"}


id: PR:Q9USM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USM8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.08","synonyms":[{"name":"Spom972h-atg20","type":"exact"}],"termid":"PR:Q9USM8"}


id: MONDO:0006394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually polypoid neoplasm that arises from the glandular epithelium of the rectal mucosa. It is characterized by a tubular architectural pattern. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C96477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum adenoma","termid":"MONDO:0000530"},{"relation_name":"is_a","term_name":"tubular adenoma","termid":"MONDO:0024660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal tubular adenoma","secondary_identifiers":["MEDGEN:474437","EFO:1000504","UMLS:C3272804"],"synonyms":[{"name":"rectal tubular adenoma","type":"exact"}],"termid":"MONDO:0006394","xrefs":{"Monarch":{"xref_id":"0006394"}}}


id: GO:1905241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of canonical Wnt signaling pathway involved in osteoblast differentiation.","definition_xrefs":["GOC:rph","GOC:TermGenie","PMID:19342382","GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:1905241)","synonyms":[{"name":"activation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"activation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"activation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"activation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up regulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up-regulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up-regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"upregulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"upregulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"upregulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"upregulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:1905241"}


id: GO:0090363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the aggregation, arrangement and bonding together of a mature, active 20S proteasome core particle complex that does not contain any regulatory particles.","definition_xrefs":["GOC:elh","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasome assembly","termid":"GO:0090364"},{"relation_name":"regulates","term_name":"proteasome core complex assembly","termid":"GO:0080129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of proteasome core complex assembly","termid":"GO:0090363"}


id: MONDO:0009386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reading disorder","termid":"MONDO:0001697"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlexia","secondary_identifiers":["UMLS:C1855928","OMIM:238350","MEDGEN:341011","MESH:C565500"],"synonyms":[{"name":"compulsive reading","type":"related"},{"name":"hyperlexia","type":"exact"},{"name":"precocious reading","type":"related"}],"termid":"MONDO:0009386","xrefs":{"Monarch":{"xref_id":"0009386"}}}


id: MONDO:0018107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete idiopathic recurrent and disabling cutaneous herpes (obsolete MONDO:0018107)","secondary_identifiers":["Orphanet:35061"],"termid":"MONDO:0018107","xrefs":{"Monarch":{"xref_id":"0018107"}}}


id: GO:0062085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["PMID:21917918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of capsule polysaccharide biosynthetic process","termid":"GO:0062084"},{"relation_name":"is_a","term_name":"positive regulation of capsule organization","termid":"GO:1901915"},{"relation_name":"positively_regulates","term_name":"capsule polysaccharide biosynthetic process","termid":"GO:0045227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of capsule polysaccharide biosynthetic process","termid":"GO:0062085"}


id: PBO:0031145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_alpha-glucan_level","termid":"PBO:0031145"}


id: PBO:0070499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 34","termid":"PBO:0070499"}


id: GO:0106034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of an assembled [2Fe-2S] cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.","definition_xrefs":["PMID:23615440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation by iron-sulfur cluster transfer","termid":"GO:0097428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"protein maturation by [2Fe-2S] cluster transfer","termid":"GO:0106034"}


id: GO:0097173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylmuramic acid (MurNAc), a monosaccharide derivative of N-acetylglucosamine.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"N-acetylmuramic acid metabolic process","termid":"GO:0097172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"N-acetylmuramic acid catabolic process","synonyms":[{"name":"N-acetylmuramate breakdown","type":"exact"},{"name":"N-acetylmuramate catabolic process","type":"exact"},{"name":"N-acetylmuramate catabolism","type":"exact"},{"name":"N-acetylmuramate degradation","type":"exact"},{"name":"N-acetylmuramic acid breakdown","type":"exact"},{"name":"N-acetylmuramic acid catabolism","type":"exact"},{"name":"N-acetylmuramic acid degradation","type":"exact"}],"termid":"GO:0097173"}


id: PBO:0067066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 92, pseudogene","termid":"PBO:0067066"}


id: PBO:0033791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_kinetochore_sliding_during_chromosome_recapture","termid":"PBO:0033791"}


id: MONDO:0015135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary immunodeficiency due to a genetic defect in innate immunity (obsolete MONDO:0015135)","secondary_identifiers":["Orphanet:101988","icd11.foundation:551037838"],"synonyms":[{"name":"primary immunodeficiency due to a defect in innate immunity","type":"related"}],"termid":"MONDO:0015135","xrefs":{"Monarch":{"xref_id":"0015135"}}}


id: PBO:0088085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX (ubiquitin regulatory X) domain-containing protein; interacts with Cdc48p, transcription is repressed when cells are grown in media containing inositol and choline; UBX6 has a paralog, UBX7, that arose from the whole genome duplication","termid":"PBO:0088085"}


id: GO:0019408
data:
  {"annotated_genes":["SJAG_04954","SJAG_02163","SJAG_00554"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97278,99502,107479],"is_not":false,"summary":null,"term":"GO:0019408"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol biosynthetic process","termid":"GO:0016094"},{"relation_name":"is_a","term_name":"dolichol metabolic process","termid":"GO:0019348"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_02163":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"dolichol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dolichol anabolism","type":"exact"},{"name":"dolichol biosynthesis","type":"exact"},{"name":"dolichol formation","type":"exact"},{"name":"dolichol synthesis","type":"exact"}],"termid":"GO:0019408","terms_by_termid":{"GO:0019408":null}}


id: GO:0000017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of alpha-glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Alpha-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in an alpha configuration.","definition_xrefs":["GOC:jl","ISBN:0198506732","PMID:9919658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transport","termid":"GO:0042946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"alpha-glucoside transport","termid":"GO:0000017"}


id: MONDO:0028569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic interstitial lung disease (obsolete MONDO:0028569)","secondary_identifiers":["Orphanet:264992"],"termid":"MONDO:0028569","xrefs":{"Monarch":{"xref_id":"0028569"}}}


id: GO:0071391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to estrogen","termid":"GO:0043627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to estrogen stimulus","synonyms":[{"name":"cellular response to 17alpha-ethynylestradiol","type":"related"},{"name":"cellular response to oestrogen stimulus","type":"exact"}],"termid":"GO:0071391"}


id: GO:0019276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine metabolic process","synonyms":[{"name":"UDP-N-acetylgalactosamine metabolism","type":"exact"}],"termid":"GO:0019276"}


id: PBO:0057098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 193b","termid":"PBO:0057098"}


id: PBO:0063310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCGF3 antisense RNA 1","termid":"PBO:0063310"}


id: PBO:0054623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2028","termid":"PBO:0054623"}


id: GO:0014072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isoquinoline alkaloid","termid":"GO:0014072"}


id: MONDO:0011471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 6p21.3.","definition_xrefs":["DOID:0110891","PMID:10577918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 3","secondary_identifiers":["MESH:C565764","OMIM:604519","MEDGEN:346785","UMLS:C1858303"],"synonyms":[{"name":"IBD3","type":"exact"},{"name":"inflammatory bowel disease 3","type":"exact"},{"name":"inflammatory bowel disease type 3","type":"exact"}],"termid":"MONDO:0011471","xrefs":{"Monarch":{"xref_id":"0011471"}}}


id: PBO:0063704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycan recognition protein 3","termid":"PBO:0063704"}


id: PBO:0006195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-modified_by","termid":"PBO:0006195"}


id: GO:0021810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Signaling by neurotransmitters and their receptors that results in the initiation of movement of cells as a component of the process of glial-mediated radial migration.","definition_xrefs":["PMID:12626695","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter signaling initiating cell movement, involved in cerebral cortex radial glia guided migration (obsolete GO:0021810)","synonyms":[{"name":"neurotransmitter signalling initiating cell movement, involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021810"}


id: GO:0050583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + H2 = NADPH + H+.","definition_xrefs":["EC:1.12.1.3","MetaCyc:1.12.1.3-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","termid":"GO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydrogen dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:18637"],"synonyms":[{"name":"NADP-linked hydrogenase activity","type":"related"},{"name":"NADP-reducing hydrogenase activity","type":"related"},{"name":"hydrogen:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050583"}


id: MONDO:0007205
data:
  {"annotated_genes":["SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86318],"is_not":false,"summary":null,"term":"MONDO:0007205"}]},"cv_name":"mondo","definition":"Diaphyseal medullary stenosis with malignant fibrous histiocytoma is a very rare autosomal dominant bone dysplasia/cancer syndrome characterized clinically by bone infarctions, cortical growth abnormalities, pathological fractures, and development of bone sarcoma (malignant fibrous histiocytoma).","definition_xrefs":["Orphanet:85182"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"disorder of polyamine metabolism","termid":"MONDO:0800159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"diaphyseal medullary stenosis-bone malignancy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1862177","DOID:0080664","GARD:10072","MEDGEN:350613","NCIT:C122660","OMIM:112250"],"synonyms":[{"name":"BDMF","type":"related"},{"name":"DMS-MFH","type":"exact"},{"name":"DMSMFH","type":"related"},{"name":"Hardcastle syndrome","type":"exact"},{"name":"Hardcastle's syndrome","type":"exact"},{"name":"bone dysplasia with malignant fibrous histiocytoma","type":"related"},{"name":"bone dysplasia with medullary fibrosarcoma","type":"related"},{"name":"bone dysplasia-medullary fibrosarcoma syndrome","type":"exact"},{"name":"diaphyseal medullary stenosis with malignant fibrous histiocytoma","type":"related"},{"name":"diaphyseal medullary stenosis-bone malignancy syndrome","type":"exact"},{"name":"diaphyseal medullary stenosis-malignant fibrous histiocytoma syndrome","type":"exact"},{"name":"myopathy, limb-girdle, with bone fragility","type":"related"}],"termid":"MONDO:0007205","terms_by_termid":{"MONDO:0007205":null},"xrefs":{"Monarch":{"xref_id":"0007205"}}}


id: GO:0030449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of complement activation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"regulates","term_name":"complement activation","termid":"GO:0006956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of complement activation","secondary_identifiers":["Reactome:R-HSA-977606"],"synonyms":[{"name":"regulation of complement cascade","type":"exact"}],"termid":"GO:0030449"}


id: MONDO:0013424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 3p is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the short arm of chromosome 3, with a highly variable phenotype typically characterized by pre- and post-natal growth retardation, intellectual disability, developmental delay and craniofacial dysmorphism (microcephaly, trigonocephaly, downslanting palpebral fissures, telecanthus, ptosis, micrognathia). Postaxial polydactyly, hypotonia, renal anomalies and congenital heart defects (e.g. atrioventricular septal defect) may be associated.","definition_xrefs":["Orphanet:1620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 3","termid":"MONDO:0016885"},{"relation_name":"is_a","term_name":"blepharophimosis - intellectual disability syndrome","termid":"MONDO:0017393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3p- syndrome","secondary_identifiers":["MESH:C536804","UMLS:C4706503","MEDGEN:1643555","NORD:951","OMIM:613792","NCIT:C41377","DOID:0060417","GARD:3750","SCTID:763528002"],"synonyms":[{"name":"3p deletion","type":"related"},{"name":"3p monosomy","type":"related"},{"name":"3p- syndrome","type":"exact"},{"name":"Chromosome 3, Monosomy 3p","type":"exact"},{"name":"Del(3p) syndrome","type":"related"},{"name":"chromosome 3, monosomy 3p25","type":"related"},{"name":"chromosome 3p deletion","type":"related"},{"name":"chromosome 3p- syndrome","type":"related"},{"name":"chromosome 3pter-p25 deletion syndrome","type":"exact"},{"name":"del(3p25)","type":"related"},{"name":"deletion 3p","type":"related"},{"name":"deletion 3p25","type":"related"},{"name":"distal 3p deletion","type":"exact"},{"name":"distal monosomy 3p","type":"exact"},{"name":"distal monosomy type 3p","type":"exact"},{"name":"monosomy 3p","type":"related"},{"name":"monosomy 3pter","type":"exact"},{"name":"partial monosomy 3p","type":"related"},{"name":"telomeric monosomy 3p","type":"exact"}],"termid":"MONDO:0013424","xrefs":{"Monarch":{"xref_id":"0013424"}}}


id: GO:0047840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dCTP + H2O = dCMP + H+ + diphosphate.","definition_xrefs":["RHEA:22636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0047429"],"is_obsolete":false,"name":"dCTP diphosphatase activity","secondary_identifiers":["MetaCyc:DCTP-PYROPHOSPHATASE-RXN","EC:3.6.1.12","Reactome:R-HSA-6786257"],"synonyms":[{"name":"dCTP nucleotidohydrolase activity","type":"related"},{"name":"dCTP pyrophosphatase activity","type":"exact"},{"name":"dCTPase activity","type":"related"},{"name":"deoxy-CTPase activity","type":"related"},{"name":"deoxycytidine triphosphatase activity","type":"related"},{"name":"deoxycytidine-triphosphatase activity","type":"related"}],"termid":"GO:0047840"}


id: PBO:0049185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grainyhead like transcription factor 2","termid":"PBO:0049185"}


id: MONDO:0006517
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant tumor that occurs in children. Representative examples include soft tissue and bone sarcomas (e.g. osteosarcoma) and embryonal neoplasms (e.g. hepatoblastoma and rhabdoid tumor).","definition_xrefs":["NCIT:C4005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood malignant neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1000654","UMLS:C0278704","MEDGEN:82962"],"synonyms":[{"name":"childhood cancer","type":"exact"},{"name":"childhood malignant neoplasm","type":"exact"},{"name":"childhood neoplasm, malignant","type":"exact"},{"name":"malignant childhood neoplasm","type":"exact"},{"name":"malignant childhood tumor","type":"exact"},{"name":"malignant childhood tumour","type":"exact"},{"name":"malignant neoplasm","type":"narrow"},{"name":"malignant paediatric neoplasm","type":"exact"},{"name":"malignant paediatric tumour","type":"exact"},{"name":"malignant pediatric neoplasm","type":"exact"},{"name":"malignant pediatric tumor","type":"exact"},{"name":"paediatric cancer","type":"exact"},{"name":"pediatric cancer","type":"exact"}],"termid":"MONDO:0006517","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0006517"}}}


id: PBO:0054306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1698","termid":"PBO:0054306"}


id: PBO:0038859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTSL4 antisense RNA 2","termid":"PBO:0038859"}


id: PBO:0091751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family, Knh4","termid":"PBO:0091751"}


id: PBO:0066893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 193","termid":"PBO:0066893"}


id: PBO:0059547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Asn (AAU/C)","termid":"PBO:0059547"}


id: PBO:0045354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOT1 like histone lysine methyltransferase","termid":"PBO:0045354"}


id: PR:O74322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1202 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S12-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.02c","synonyms":[{"name":"Spom972h-rps1202","type":"exact"}],"termid":"PR:O74322"}


id: MONDO:0850353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prostate carcinoma that is characterized by continued growth and spread despite the surgical removal of the testes or medical intervention to block androgen production.","definition_xrefs":["DOID:0080909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"castration-resistant prostate carcinoma","secondary_identifiers":["UMLS:C1328504","MEDGEN:730224"],"termid":"MONDO:0850353","xrefs":{"Monarch":{"xref_id":"0850353"}}}


id: PBO:0048620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 1","termid":"PBO:0048620"}


id: GO:0034813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-7,8-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:1137"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene 7,8-dioxygenase activity (obsolete GO:0034813)","termid":"GO:0034813"}


id: GO:0043930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle) as part of the primary follicle stage of oogenesis.","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian follicle growth","termid":"GO:0001545"},{"relation_name":"part_of","term_name":"primary follicle stage","termid":"GO:0048160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth involved in primary follicle stage","synonyms":[{"name":"primary ovarian follicle growth during primary follicle stage","type":"related"}],"termid":"GO:0043930"}


id: FYPO:0002619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium butyrate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on sodium butyrate","synonyms":[{"name":"normal cell population growth in presence of sodium butyrate","type":"exact"},{"name":"normal cell population growth on sodium butyrate","type":"exact"},{"name":"normal cellular response to sodium butyrate","type":"related"},{"name":"normal vegetative cell population growth on sodium butyrate","type":"exact"}],"termid":"FYPO:0002619"}


id: PBO:0030986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_metabolic_process_during_vegetative_growth","termid":"PBO:0030986"}


id: MONDO:0000598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A language disorder that involves an acquired impairment of any language modality such as producing or comprehending spoken or written language.","definition_xrefs":["DOID:0060046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"language disorder","termid":"MONDO:0004750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aphasia","secondary_identifiers":["icd11.foundation:1167055901","ICD10CM:R47.01","UMLS:C0003537","MESH:D001037","MEDGEN:8159"],"termid":"MONDO:0000598","xrefs":{"Monarch":{"xref_id":"0000598"}}}


id: PR:P41389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11630:SF42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.05","secondary_identifiers":["UniProtKB:P41389"],"synonyms":[{"name":"SPAC1B2.05","type":"related"},{"name":"Spom972h-MCM5","type":"exact"},{"name":"cell division control protein nda4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"minichromosome maintenance protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nda4","type":"related"}],"termid":"PR:P41389"}


id: PBO:0038300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kegg_pathway","termid":"PBO:0038300"}


id: PBO:0091817
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAD23","termid":"PBO:0091817"}


id: PBO:0086936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication","termid":"PBO:0086936"}


id: MONDO:0016097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Symptomatic forms of Duchenne and Becker muscular dystrophies (DMD and BMD) in females carriers are characterized by variable degrees of muscle weakness due to progressive skeletal myopathy, sometimes associated with dilated cardiomyopathy or left ventricle dilation.","definition_xrefs":["Orphanet:206546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267"],"is_obsolete":false,"name":"symptomatic form of muscular dystrophy of Duchenne and Becker in female carriers","secondary_identifiers":["UMLS:C4707359","MEDGEN:1631985","SCTID:765197008","GARD:20350"],"termid":"MONDO:0016097","xrefs":{"Monarch":{"xref_id":"0016097"}}}


id: GO:0006460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-prolyl isomerase B reaction (obsolete GO:0006460)","synonyms":[{"name":"peptidyl-prolyl isomerase B reaction","type":"exact"}],"termid":"GO:0006460"}


id: PBO:0044069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 13, pseudogene","termid":"PBO:0044069"}


id: GO:1905794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a puromycin stimulus.","definition_xrefs":["PMID:25736288","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to puromycin","synonyms":[{"name":"response to 3'-deoxy-N,N-dimethyl-3'-(O-methyl-L-tyrosinamido)adenosine","type":"exact"}],"termid":"GO:1905794"}


id: PBO:0081017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 48","termid":"PBO:0081017"}


id: MONDO:1010456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in woolly monkeys.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, woolly monkeys","secondary_identifiers":["OMIA:000515-9518"],"termid":"MONDO:1010456","xrefs":{"Monarch":{"xref_id":"1010456"}}}


id: PBO:0046884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A10, pseudogene","termid":"PBO:0046884"}


id: MONDO:0013478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"PLIN1-related familial partial lipodystrophy","secondary_identifiers":["DOID:0070205","OMIM:613877","Orphanet:280356","UMLS:C5191005","MEDGEN:1675945","GARD:12601"],"synonyms":[{"name":"FPLD due to PLIN1 mutations","type":"related"},{"name":"FPLD4","type":"exact"},{"name":"PLIN1-related FPLD","type":"exact"},{"name":"familial partial lipodystrophy associated with PLIN1 mutations","type":"related"},{"name":"familial partial lipodystrophy type 4","type":"related"},{"name":"lipodystrophy, familial partial, associated with Plin1 mutations","type":"related"},{"name":"lipodystrophy, familial partial, type 4","type":"related"}],"termid":"MONDO:0013478","xrefs":{"Monarch":{"xref_id":"0013478"}}}


id: PBO:0040065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPP19 pseudogene 1","termid":"PBO:0040065"}


id: PBO:0027452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_etoposide","termid":"PBO:0027452"}


id: GO:0002602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002581"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002601"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"down regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"down-regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"downregulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"inhibition of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"negative regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002602"}


id: PBO:0058073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4291","termid":"PBO:0058073"}


id: PBO:0057021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 122","termid":"PBO:0057021"}


id: GO:0009514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized form of peroxisome that contains the enzymes of the glyoxylate pathway. The glyoxysome is found in some plant cells, notably the cells of germinating seeds.","definition_xrefs":["GOC:dhl","ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005777"],"is_obsolete":false,"name":"glyoxysome","secondary_identifiers":["Wikipedia:Glyoxysome"],"termid":"GO:0009514"}


id: PBO:0086793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; transcription is significantly increased in a NAP1 deletion background; deletion mutant has increased accumulation of nickel and selenium","termid":"PBO:0086793"}


id: PBO:0000678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim9-Tim10 complex subunit Tim10 (predicted)","termid":"PBO:0000678"}


id: GO:0035038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the haploid nucleus of the unfertilized egg.","definition_xrefs":["GOC:bf","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"female pronucleus assembly","termid":"GO:0035038"}


id: GO:0052553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host immune response","secondary_identifiers":["GO:0052552"],"synonyms":[{"name":"modulation by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host immune response","type":"exact"},{"name":"perturbation of host immune response","type":"exact"}],"termid":"GO:0052553"}


id: MONDO:1011441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mast cell tumor that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mast cell tumor, non-human animal","secondary_identifiers":["OMIA:001797"],"termid":"MONDO:1011441","xrefs":{"Monarch":{"xref_id":"1011441"}}}


id: PBO:0070781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 11","termid":"PBO:0070781"}


id: PBO:0034559
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_kinetochore_morphology_during_vegetative_growth","termid":"PBO:0034559"}


id: PBO:0057316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518c","termid":"PBO:0057316"}


id: MONDO:0026426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X inactivation, familial skewed","termid":"MONDO:0100209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X inactivation, familial skewed, 2","secondary_identifiers":["OMIM:300179","UMLS:C1846257","MEDGEN:335376","MESH:C564572"],"synonyms":[{"name":"SXI2","type":"related"},{"name":"X INACTIVATION, FAMILIAL SKEWED, 2","type":"related"},{"name":"X-inactivation, familial skewed, 2","type":"exact"}],"termid":"MONDO:0026426","xrefs":{"Monarch":{"xref_id":"0026426"}}}


id: PBO:0066105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RasGEF domain family member 1C","termid":"PBO:0066105"}


id: PBO:0031476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_cortical_patch_internalization","termid":"PBO:0031476"}


id: PR:O94368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.02c","synonyms":[{"name":"Spom972h-ppr1","type":"exact"}],"termid":"PR:O94368"}


id: PBO:0042366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD164 molecule","termid":"PBO:0042366"}


id: FYPO:0001762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA modification, the covalent alteration of one or more nucleotides within a tRNA molecule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0006400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal tRNA modification","synonyms":[{"name":"normal tRNA modification during mitotic cell cycle","type":"related"},{"name":"normal tRNA modification during vegetative growth","type":"exact"}],"termid":"FYPO:0001762"}


id: GO:0090374
data:
  {"annotated_genes":["SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75090],"is_not":false,"summary":null,"term":"GO:0090374"}]},"cv_name":"biological_process","definition":"The process in which an oligopeptide is transported out of the mitochondrial matrix. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["PMID:11251115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"export from the mitochondrion","termid":"GO:0170037"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"oligopeptide export from mitochondrion","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0090374","terms_by_termid":{"GO:0090374":null}}


id: MONDO:0009544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephaly","termid":"MONDO:0016608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrocephaly/megalencephaly syndrome, autosomal recessive","secondary_identifiers":["UMLS:C3806412","MESH:C537453","OMIM:248000","MEDGEN:812742"],"synonyms":[{"name":"Fryns Dereymaeker Haegeman syndrome","type":"related"},{"name":"MGCPH","type":"related"},{"name":"intellectual disability, macrocephaly, short stature and craniofacial dysmorphism","type":"related"},{"name":"macrocephaly/megalencephaly syndrome, autosomal recessive","type":"exact"},{"name":"mental retardation, macrocephaly, short stature and craniofacial dysmorphism","type":"related"}],"termid":"MONDO:0009544","xrefs":{"Monarch":{"xref_id":"0009544"}}}


id: PR:O14104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoisocitrate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.04","synonyms":[{"name":"HICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys12","type":"exact"}],"termid":"PR:O14104"}


id: PBO:0084915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic spindle protein; interacts with components of the Dam1 (DASH) complex, its effector Sli15p, and microtubule-associated protein Bim1p; also localizes to nuclear microtubules and to the bud neck in a ring-shaped structure; inhibits dynein function","termid":"PBO:0084915"}


id: PR:O13817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec73 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec73 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.01c","synonyms":[{"name":"Spom972h-sec73","type":"exact"}],"termid":"PR:O13817"}


id: PBO:0029089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_spheroid_cell","termid":"PBO:0029089"}


id: SO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which changes polypeptide functioning with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_function_variant","synonyms":[{"name":"polypeptide function variant","type":"exact"}],"termid":"SO:0001554"}


id: GO:0090330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"regulates","term_name":"platelet aggregation","termid":"GO:0070527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of platelet aggregation","termid":"GO:0090330"}


id: MONDO:1010531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, sheep","secondary_identifiers":["OMIA:000197-9940"],"termid":"MONDO:1010531","xrefs":{"Monarch":{"xref_id":"1010531"}}}


id: GO:0034907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetanilide + O2 + 2 H+ + NADH = catechol + NAD+ + acetamide.","definition_xrefs":["UM-BBD_reactionID:r0723"],"gene_count":0,"genotype_count":0,"name":"obsolete acetanilide 1,2-dioxygenase activity (obsolete GO:0034907)","termid":"GO:0034907"}


id: PBO:0089767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor poly(A) polymerase Pla1","termid":"PBO:0089767"}


id: PR:Q9HGL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Ts, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11741:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Ts, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.07c","secondary_identifiers":["UniProtKB:Q9HGL5"],"synonyms":[{"name":"EF-Ts (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"EF-TsMt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC800.07c","type":"related"},{"name":"Spom972h-TSFM","type":"exact"}],"termid":"PR:Q9HGL5"}


id: MONDO:0004108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the diaphragma sellae.","definition_xrefs":["NCIT:C5283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sella turcica neoplasm","termid":"MONDO:0002720"},{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragma sellae meningioma","secondary_identifiers":["DOID:7103","MEDGEN:234200","UMLS:C1333283"],"synonyms":[{"name":"diaphragm sellae meningioma","type":"exact"},{"name":"diaphragma sellae meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of diaphragma sellae","type":"exact"},{"name":"meningioma of Diaphragma sellae","type":"exact"},{"name":"meningioma of diaphragm sellae","type":"exact"},{"name":"meningioma of the Diaphragma sellae","type":"exact"},{"name":"meningioma of the diaphragm sellae","type":"exact"}],"termid":"MONDO:0004108","xrefs":{"Monarch":{"xref_id":"0004108"}}}


id: GO:0002403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the mucosal-associated lymphoid tissue (MALT) mediated by T cells.","definition_xrefs":["PMID:16551263","GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction in mucosal-associated lymphoid tissue","termid":"GO:0002401"},{"relation_name":"is_a","term_name":"peripheral T cell tolerance induction","termid":"GO:0002458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell tolerance induction in mucosal-associated lymphoid tissue","synonyms":[{"name":"T cell tolerance induction in MALT","type":"exact"}],"termid":"GO:0002403"}


id: PBO:0087078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L39; required for ribosome biogenesis; loss of both Rpl31p and Rpl39p confers lethality; also exhibits genetic interactions with SIS1 and PAB1; homologous to mammalian ribosomal protein L39, no bacterial homolog","termid":"PBO:0087078"}


id: MONDO:1010928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pseudomyotonia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudomyotonia, non-human animal","termid":"MONDO:1010201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pseudomyotonia, cattle","secondary_identifiers":["OMIA:001464-9913"],"termid":"MONDO:1010928","xrefs":{"Monarch":{"xref_id":"1010928"}}}


id: MONDO:0013856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertelorism and other facial dysmorphism, brachydactyly, genital abnormalities, intellectual disability, and recurrent inflammatory episodes","secondary_identifiers":["MEDGEN:766379","OMIM:614684","UMLS:C3553465"],"synonyms":[{"name":"hypertelorism and other facial dysmorphism, brachydactyly, genital abnormalities, intellectual disability, and recurrent inflammatory episodes","type":"exact"},{"name":"hypertelorism and other facial dysmorphism, brachydactyly, genital abnormalities, mental retardation, and recurrent inflammatory episodes","type":"exact"}],"termid":"MONDO:0013856","xrefs":{"Monarch":{"xref_id":"0013856"}}}


id: PBO:0070756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 12","termid":"PBO:0070756"}


id: PBO:0040124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 10","termid":"PBO:0040124"}


id: PBO:0042509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 3","termid":"PBO:0042509"}


id: GO:0005624
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane fraction (obsolete GO:0005624)","synonyms":[{"name":"membrane fraction","type":"exact"}],"termid":"GO:0005624"}


id: PBO:0078474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotropin releasing hormone degrading enzyme","termid":"PBO:0078474"}


id: MONDO:0957593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 86","secondary_identifiers":["OMIM:620499","DOID:0070585","UMLS:C5882755","MEDGEN:1847370"],"termid":"MONDO:0957593","xrefs":{"Monarch":{"xref_id":"0957593"}}}


id: MONDO:0800383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 34","secondary_identifiers":["MEDGEN:1612206","UMLS:C4539386"],"synonyms":[{"name":"JBTS34","type":"exact"}],"termid":"MONDO:0800383","xrefs":{"Monarch":{"xref_id":"0800383"}}}


id: GO:0030751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + licodione = 2'-O-methyllicodione + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:18521","EC:2.1.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"licodione 2'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:LICODIONE-2-O-METHYLTRANSFERASE-RXN","KEGG_REACTION:R03623"],"synonyms":[{"name":"S-adenosyl-L-methionine:licodione 2'-O-methyltransferase activity","type":"related"}],"termid":"GO:0030751"}


id: GO:0045152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an antisigma factor, a factor which inhibits the ability of the sigma factor to function as a transcriptional initiator.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"antisigma factor binding","synonyms":[{"name":"antisigma factor antagonist activity","type":"narrow"}],"termid":"GO:0045152"}


id: MONDO:0012552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple endocrine neoplasia type 4 (MEN4) is a very rare form of MEN, an inherited cancer syndrome, characterized by parathyroid and anterior pituitary tumors, possibly associated with adrenal, renal, and reproductive organ tumors.","definition_xrefs":["Orphanet:276152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple endocrine neoplasia","termid":"MONDO:0017169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"multiple endocrine neoplasia type 4","secondary_identifiers":["DOID:0080137","icd11.foundation:157945677","MEDGEN:373469","MESH:C567059","GARD:17275","NCIT:C157449","UMLS:C1970712","SCTID:715907003","OMIM:610755"],"synonyms":[{"name":"CDKN1B multiple endocrine neoplasia","type":"exact"},{"name":"MEN4","type":"exact"},{"name":"multiple endocrine neoplasia caused by mutation in CDKN1B","type":"exact"},{"name":"multiple endocrine neoplasia type 4","type":"exact"},{"name":"multiple endocrine neoplasia, type 4","type":"related"},{"name":"multiple endocrine neoplasia, type IV","type":"exact"}],"termid":"MONDO:0012552","xrefs":{"Monarch":{"xref_id":"0012552"}}}


id: GO:0070900
data:
  {"annotated_genes":["SJAG_00865","SJAG_04113","SJAG_00255","SJAG_00358","SJAG_04700","SJAG_02302","SJAG_04367"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[113685,118053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[116402,93772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[92303,107937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within a mitochondrial tRNA molecule to produce a mitochondrial tRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine metabolic process","termid":"GO:0070525"},{"relation_name":"is_a","term_name":"mitochondrial tRNA processing","termid":"GO:0090646"},{"relation_name":"is_a","term_name":"mitochondrial RNA modification","termid":"GO:1900864"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00358":null,"SJAG_00865":null,"SJAG_02302":null,"SJAG_04113":null,"SJAG_04367":null,"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA modification","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6787450"],"termid":"GO:0070900","terms_by_termid":{"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:1990799":null}}


id: GO:0072349
data:
  {"annotated_genes":["SJAG_01660","SJAG_05175","SJAG_03503","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[112580,95029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034634"},{"annotations":[107749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"}]},"cv_name":"molecular_function","definition":"Enables the transfer of modified amino acids from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01660":null,"SJAG_03503":null,"SJAG_03577":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"modified amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amino acid derivative transmembrane transporter activity","type":"exact"},{"name":"modified amino acid transporter activity","type":"broad"}],"termid":"GO:0072349","terms_by_termid":{"GO:0008517":null,"GO:0015233":null,"GO:0034634":null}}


id: PBO:0060020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 8","termid":"PBO:0060020"}


id: FYPO:0002301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are curved along the long axis and contain one or more septa. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, curved septated cells (obsolete FYPO:0002301)","synonyms":[{"name":"inviable microcolony, curved septated vegetative cells","type":"exact"}],"termid":"FYPO:0002301"}


id: PBO:0070176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 90 pseudogene","termid":"PBO:0070176"}


id: GO:0051494
data:
  {"annotated_genes":["SJAG_03048","SJAG_02700","SJAG_01894","SJAG_00279","SJAG_03455","SJAG_01993","SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87772,113761,91834,98399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[90387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[97783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[101856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"negatively_regulates","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_03048":null,"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytoskeleton organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cytoskeleton organization","type":"exact"},{"name":"down-regulation of cytoskeleton organization","type":"exact"},{"name":"downregulation of cytoskeleton organization","type":"exact"},{"name":"inhibition of cytoskeleton organization","type":"narrow"},{"name":"negative regulation of cytoskeleton organisation","type":"exact"},{"name":"negative regulation of cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0051494","terms_by_termid":{"GO:0034316":null,"GO:0051016":null,"GO:1903500":null,"GO:2000432":null}}


id: PBO:0065306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 23","termid":"PBO:0065306"}


id: PBO:0000655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase Pli1","termid":"PBO:0000655"}


id: GO:0014744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle adaptation","synonyms":[{"name":"positive regulation of muscle plasticity","type":"related"}],"termid":"GO:0014744"}


id: GO:0015340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (Zn2+ or Cd2+)(out) = (Zn2+ or Cd2+)(in). The activity is driven by proton motive force, possibly by proton symport.","definition_xrefs":["TC:2.A.4.2.2"],"gene_count":0,"genotype_count":0,"name":"obsolete zinc, cadmium uptake permease activity (obsolete GO:0015340)","synonyms":[{"name":"zinc, cadmium uptake permease activity","type":"exact"}],"termid":"GO:0015340"}


id: GO:0102348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: behenoyl-CoA + NADP = trans-2-docosenoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-docosan-2-enoyl-CoA reductase activity (obsolete GO:0102348)","termid":"GO:0102348"}


id: PATO:0002360
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition that can be compared on a linear scale - that is that it can be increased or decreased.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disposition","termid":"PATO:0001727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tendency","termid":"PATO:0002360"}


id: PBO:0067919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 221","termid":"PBO:0067919"}


id: GO:1901362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organic cyclic compound.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic cyclic compound biosynthetic process (obsolete GO:1901362)","synonyms":[{"name":"organic cyclic compound anabolism","type":"exact"},{"name":"organic cyclic compound biosynthesis","type":"exact"},{"name":"organic cyclic compound formation","type":"exact"},{"name":"organic cyclic compound synthesis","type":"exact"}],"termid":"GO:1901362"}


id: PBO:0069112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 361, pseudogene","termid":"PBO:0069112"}


id: PBO:0083309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps HMLALPHA1","termid":"PBO:0083309"}


id: PBO:0116436
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"White-Collar for Neurospora homologS","termid":"PBO:0116436"}


id: PATO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a process by virtue of that process having two or more organisms as participants.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-organismal process quality","termid":"PATO:0002486"}


id: PBO:0065138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKX pseudogene 1","termid":"PBO:0065138"}


id: PATO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of having changed from one fully differentiated state into another.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaplastic","synonyms":[{"name":"trans-differentiated","type":"related"}],"termid":"PATO:0002101"}


id: MONDO:0033481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia 46","secondary_identifiers":["OMIM:617770","GARD:22352","DOID:0080288","Orphanet:589522","UMLS:C4540404","MEDGEN:1624251"],"synonyms":[{"name":"SCA46","type":"related"},{"name":"spinocerebellar ataxia 46","type":"exact"},{"name":"spinocerebellar ataxia, 46, autosomal dominant, with sensory axonal neuropathy","type":"related"}],"termid":"MONDO:0033481","xrefs":{"Monarch":{"xref_id":"0033481"}}}


id: PBO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate synthase Glt1 (predicted)","termid":"PBO:0001987"}


id: PBO:0088579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPAC4G9.22 syntenic ortholog, no amino acid similarity (sequence or composition), possibly both are RNAs","termid":"PBO:0088579"}


id: PBO:0088029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiB family mitochondrial protein; involved in mobilization of CoQ from its site of synthesis on the inner mitochondrial membrane to other sites of action; contains transmembrane domain and mitochondrial targeting sequence","termid":"PBO:0088029"}


id: MONDO:1010487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, chicken","secondary_identifiers":["OMIA:001041-9031"],"termid":"MONDO:1010487","xrefs":{"Monarch":{"xref_id":"1010487"}}}


id: PBO:0089195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase Stp1, unknown biological role","termid":"PBO:0089195"}


id: MONDO:0016496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pharyngeal-cervical-brachial variant of Guillain-Barre syndrome","secondary_identifiers":["UMLS:C5190783","GARD:20614","Orphanet:231426","MEDGEN:1682775"],"synonyms":[{"name":"PCB variant of GBS","type":"exact"},{"name":"PCB variant of Guillain-Barre syndrome","type":"exact"},{"name":"PCB variant of Guillain-Barré syndrome","type":"exact"},{"name":"pharyngeal-cervical-brachial variant of Guillain-Barré syndrome","type":"related"},{"name":"pharyngeal-cervical-brachial weakness","type":"exact"},{"name":"pharyngo-cervico-brachial variant of GBS","type":"exact"},{"name":"pharyngo-cervico-brachial variant of Guillain-Barre syndrome","type":"exact"},{"name":"pharyngo-cervico-brachial variant of Guillain-Barré syndrome","type":"exact"}],"termid":"MONDO:0016496","xrefs":{"Monarch":{"xref_id":"0016496"}}}


id: PBO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.3","termid":"PBO:0001863"}


id: GO:0050150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + H+ = catechol + CO2.","definition_xrefs":["EC:4.1.1.46","RHEA:21492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"o-pyrocatechuate decarboxylase activity","secondary_identifiers":["GO:0018790","KEGG_REACTION:R00821","MetaCyc:O-PYROCATECHUATE-DECARBOXYLASE-RXN","UM-BBD_reactionID:r0579"],"synonyms":[{"name":"2,3-DHBA decarboxylase activity","type":"related"},{"name":"2,3-dihydroxybenzoate carboxy-lyase (catechol-forming)","type":"related"},{"name":"2,3-dihydroxybenzoate carboxy-lyase activity","type":"related"},{"name":"2,3-dihydroxybenzoate decarboxylase activity","type":"exact"},{"name":"2,3-dihydroxybenzoic acid decarboxylase activity","type":"related"}],"termid":"GO:0050150"}


id: PBO:0040506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advillin","termid":"PBO:0040506"}


id: GO:0110116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of compound eye photoreceptor cell differentiation.","definition_xrefs":["GOC:ha","PMID:16377567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photoreceptor cell differentiation","termid":"GO:0046532"},{"relation_name":"regulates","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"}


id: PR:Q9P3T9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bsd1 gene.","definition_xrefs":["UniProtKB:Q9P3T9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal homeostasis protein bsd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.07c","synonyms":[{"name":"Spom972h-bsd1","type":"exact"}],"termid":"PR:Q9P3T9"}


id: GO:1901834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of deadenylation-independent decapping of nuclear-transcribed mRNA.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"GO:0031087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"regulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"regulation of deadenylylation-independent decapping","type":"exact"}],"termid":"GO:1901834"}


id: PBO:0059665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 31","termid":"PBO:0059665"}


id: PBO:0010228
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paramyloidosis","termid":"PBO:0010228"}


id: GO:0010373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of gibberellin biosynthetic process","synonyms":[{"name":"negative regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010373"}


id: PBO:0048863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 8","termid":"PBO:0048863"}


id: MONDO:0033550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete high density lipoprotein cholesterol level quantitative trait locus 7 (obsolete MONDO:0033550)","secondary_identifiers":["OMIM:618979"],"synonyms":[{"name":"HDLCQ7","type":"related"},{"name":"HIGH DENSITY LIPOPROTEIN CHOLESTEROL LEVEL QUANTITATIVE TRAIT LOCUS 7","type":"related"}],"termid":"MONDO:0033550","xrefs":{"Monarch":{"xref_id":"0033550"}}}


id: GO:0043649
data:
  {"annotated_genes":["SJAG_03434","SJAG_00714","SJAG_00937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[111264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[91215,79212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_00937":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"dicarboxylic acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"dicarboxylate catabolic process","type":"exact"},{"name":"dicarboxylate catabolism","type":"exact"},{"name":"dicarboxylic acid breakdown","type":"exact"},{"name":"dicarboxylic acid catabolism","type":"exact"},{"name":"dicarboxylic acid degradation","type":"exact"}],"termid":"GO:0043649","terms_by_termid":{"GO:0006533":null,"GO:0006538":null,"GO:0019266":null}}


id: PBO:0085437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A+) RNA-binding protein; key surveillance factor for the selective export of spliced mRNAs from the nucleus to the cytoplasm; preference for intron-containing genes; similar to Npl3p; also binds single-stranded telomeric repeat sequence in vitro; relocalizes to the cytosol in response to hypoxia; GBP2 has a paralog, HRB1, that arose from the whole genome duplication","termid":"PBO:0085437"}


id: MONDO:0020396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anomaly of the tricuspid valve chordae is a rare, congenital anomaly of the tricuspid subvalvular apparatus characterized by aberrant tendinous chords, which insert at the clear zone of the leaflet instead of its free edge and connect to the endocardium instead of the papillary muscles. Resulting tethering of one or more tricuspid leaflets leads to their impaired mobility and tricuspid regurgitation. Association with other congenital cardiac anomalies has been reported.","definition_xrefs":["Orphanet:99055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"anomaly of the tricuspid valve chordae","secondary_identifiers":["UMLS:C3165162","GARD:19623","MEDGEN:757566"],"termid":"MONDO:0020396","xrefs":{"Monarch":{"xref_id":"0020396"}}}


id: PATO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being arranged in two opposite rows (and hence in the same plane).","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distichous","termid":"PATO:0001952"}


id: GO:2000841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dehydroepiandrosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"regulation of dehydroepiandrosterone secretion","termid":"GO:2000840"},{"relation_name":"negatively_regulates","term_name":"dehydroepiandrosterone secretion","termid":"GO:0035942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dehydroepiandrosterone secretion","synonyms":[{"name":"negative regulation of 3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"negative regulation of DHEA secretion","type":"exact"},{"name":"negative regulation of dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:2000841"}


id: PBO:0074048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 29","termid":"PBO:0074048"}


id: PBO:0034084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-expressed_in","termid":"PBO:0034084"}


id: PBO:0040135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating signal cointegrator 1 complex subunit 1","termid":"PBO:0040135"}


id: PR:000027570
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PMID:11242054","PomBase:MAH","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.1","termid":"PR:000027569"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"SPAC1834.04","type":"related"},{"name":"Spom-hht1","type":"exact"}],"termid":"PR:000027570"}


id: GO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfonate + 2-oxoglutarate + O2 = sulfite + aminoacetaldehyde + succinate + CO2.","definition_xrefs":["GOC:clt","PMID:10482536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sulfonate dioxygenase activity","synonyms":[{"name":"sulfonate/alpha-ketoglutarate dioxygenase activity","type":"exact"},{"name":"sulphonate dioxygenase activity","type":"exact"}],"termid":"GO:0000907"}


id: PR:Q10153
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDP-diacylglycerol--inositol 3-phosphatidyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15362:SF2","PRO:DNx","OMA:SCHPO00257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.08","secondary_identifiers":["UniProtKB:Q10153"],"synonyms":[{"name":"PI synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDIPT","type":"exact"},{"name":"phosphatidylinositol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10153"}


id: GO:0140952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl27-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me2.","definition_xrefs":["RHEA:64452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0140096","GO:0016741","GO:0003674","GO:0003824","GO:0016740","GO:0008276"],"is_obsolete":false,"name":"histone H3K27 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.371"],"synonyms":[{"name":"histone H3-K27 dimethylase activity","type":"exact"},{"name":"histone H3-K27 dimethylation","type":"broad"},{"name":"histone H3K27 dimethylase activity","type":"exact"},{"name":"histone H3K27 dimethylation","type":"broad"},{"name":"histone H3K27 mono/dimethylase activity","type":"exact"},{"name":"histone lysine N-dimethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140952"}


id: PBO:0052788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 27","termid":"PBO:0052788"}


id: MONDO:0018686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of Creutzfeldt Jacob disease that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, bovine spongiform","termid":"MONDO:0025149"},{"relation_name":"is_a","term_name":"Creutzfeldt Jacob disease","termid":"MONDO:0005357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired Creutzfeldt-Jakob disease","secondary_identifiers":["Orphanet:454700","MESH:C538481","UMLS:C5681100","MONDO:0025169","GARD:17788","MEDGEN:1826177","NANDO:1200192"],"synonyms":[{"name":"acquired CJD","type":"exact"},{"name":"acquired Creutzfeldt Jacob disease","type":"exact"},{"name":"sporadic CJD","type":"related"}],"termid":"MONDO:0018686","xrefs":{"Monarch":{"xref_id":"0018686"}}}


id: MONDO:0005498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serious bacterial infection caused by botulinum toxin which is produced by Clostridium botulinum. Patients are infected usually by ingestion of contaminated food or wound contamination. It leads to muscle paralysis which may result in respiratory failure.","definition_xrefs":["NCIT:C84599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Clostridium infectious disease","termid":"MONDO:0024388"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"botulism","secondary_identifiers":["EFO:0005542","Orphanet:1267","MEDGEN:14204","NORD:867","SCTID:398565003","CSP:5000-0060","UMLS:C0006057","icd11.foundation:78422942","MedDRA:10006041","GARD:943","MESH:D001906","DOID:11976"],"synonyms":[{"name":"botulism","type":"exact"},{"name":"botulism poisoning","type":"exact"},{"name":"food poisoning due to Clostridium botulinum","type":"narrow"},{"name":"foodborne botulism","type":"narrow"},{"name":"foodborne botulism (subtype)","type":"related"},{"name":"infant botulism (subtype)","type":"related"},{"name":"infection due to Clostridium botulinum","type":"exact"},{"name":"intoxication with Clostridium botulinum toxin","type":"narrow"},{"name":"wound botulism (subtype)","type":"narrow"}],"termid":"MONDO:0005498","xrefs":{"Monarch":{"xref_id":"0005498"}}}


id: PR:O94312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdp2 gene.","definition_xrefs":["UniProtKB:O94312","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain-containing protein2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.07c","synonyms":[{"name":"Spom972h-pdp2","type":"exact"}],"termid":"PR:O94312"}


id: GO:1904848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell chemotaxis to fibroblast growth factor.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph","PMID:23233752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904847"},{"relation_name":"negatively_regulates","term_name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell chemotaxis to fibroblast growth factor","synonyms":[{"name":"down regulation of cell chemotaxis to fibroblast growth factor","type":"exact"},{"name":"down-regulation of cell chemotaxis to fibroblast growth factor","type":"exact"},{"name":"downregulation of cell chemotaxis to fibroblast growth factor","type":"exact"},{"name":"inhibition of cell chemotaxis to fibroblast growth factor","type":"narrow"}],"termid":"GO:1904848"}


id: PBO:0002724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASp homolog","termid":"PBO:0002724"}


id: PBO:0076151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinyl-CoA:glutarate-CoA transferase","termid":"PBO:0076151"}


id: PBO:0005207
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Friedreich's ataxia","termid":"PBO:0005207"}


id: PBO:0015242
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(4)","termid":"PBO:0015242"}


id: PBO:0089055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Adn2","termid":"PBO:0089055"}


id: PBO:0039951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariadne RBR E3 ubiquitin protein ligase 2 pseudogene 1","termid":"PBO:0039951"}


id: GO:0033239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"negatively_regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amine metabolic process","synonyms":[{"name":"negative regulation of amine metabolism","type":"exact"},{"name":"negative regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033239"}


id: GO:0016697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, cytochrome as acceptor","secondary_identifiers":["GO:0016698","EC:1.12.2.-"],"termid":"GO:0016697"}


id: PATO:0000322
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with high wavelength of the long-wave end of the visible spectrum, evoked in the human observer by radiant energy with wavelengths of approximately 630 to 750 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"red","termid":"PATO:0000322"}


id: GO:2000675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of type B pancreatic cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell apoptotic process","termid":"GO:2000674"},{"relation_name":"negatively_regulates","term_name":"type B pancreatic cell apoptotic process","termid":"GO:0097050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type B pancreatic cell apoptotic process","synonyms":[{"name":"negative regulation of pancreatic B cell apoptosis","type":"exact"},{"name":"negative regulation of pancreatic beta cell apoptosis","type":"exact"},{"name":"negative regulation of type B pancreatic cell apoptosis","type":"narrow"}],"termid":"GO:2000675"}


id: PATO:0001267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated brown","synonyms":[{"name":"bright brown","type":"related"}],"termid":"PATO:0001267"}


id: PBO:0067063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 88, pseudogene","termid":"PBO:0067063"}


id: PBO:0052229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 6","termid":"PBO:0052229"}


id: MONDO:0859393
data:
  {"annotated_genes":["SJAG_03436","SJAG_00213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859575"},{"annotations":[85143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859576"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00213":null,"SJAG_03436":null},"genotype_count":0,"is_obsolete":false,"name":"Atelis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:620184"],"termid":"MONDO:0859393","terms_by_termid":{"MONDO:0859575":null,"MONDO:0859576":null},"xrefs":{"Monarch":{"xref_id":"0859393"}}}


id: GO:0039663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Merging of the virion membrane and a host membrane (host plasma membrane or host organelle membrane) that is involved in the uptake of a virus into a host cell.","definition_xrefs":["UniProtKB-KW:KW-1168","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane fusion involved in viral entry into host cell","synonyms":[{"name":"fusion of virus membrane with host membrane","type":"related"},{"name":"fusion of virus membrane with host membrane during viral entry","type":"related"},{"name":"viral entry into host cell via membrane fusion","type":"related"}],"termid":"GO:0039663"}


id: PBO:0046629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 10","termid":"PBO:0046629"}


id: SO:0001150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four consecutive peptide resides of type VIa or type VIb and where the i+2 residue is cis-proline.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six","synonyms":[{"name":"beta turn type six","type":"exact"},{"name":"cis-proline loop","type":"exact"},{"name":"type VI beta turn","type":"exact"},{"name":"type VI turn","type":"exact"}],"termid":"SO:0001150"}


id: MONDO:0026185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic respiratory or mediastinal malformation (obsolete MONDO:0026185)","secondary_identifiers":["Orphanet:183554"],"termid":"MONDO:0026185","xrefs":{"Monarch":{"xref_id":"0026185"}}}


id: GO:0005570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nuclear RNA (obsolete GO:0005570)","synonyms":[{"name":"small nuclear RNA","type":"exact"}],"termid":"GO:0005570"}


id: PBO:0060345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin X","termid":"PBO:0060345"}


id: FYPO:0005082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at long terminal repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome at long terminal repeat","termid":"FYPO:0002575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to chromatin at long terminal repeat","synonyms":[{"name":"normal protein localisation to chromatin at long terminal repeat","type":"exact"},{"name":"normal protein localization to chromatin at LTR","type":"exact"},{"name":"normal protein localization to chromatin at long terminal repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at long terminal repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0005082"}


id: MONDO:0016451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic hypersomnia with long sleep time is a sleep disorder characterized by good quality night rest of 10 hours or more, excessive daytime drowsiness that is more or less continual with long episodes of non-restorative sleep, and difficult waking with sleep drunkenness or sleep inertia.","definition_xrefs":["Orphanet:228315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic hypersomnia","termid":"MONDO:0018044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hypersomnia with long sleep time","secondary_identifiers":["UMLS:C2711059","ICD9:327.11","SCTID:442416002","ICD10CM:G47.11","MEDGEN:750832"],"termid":"MONDO:0016451","xrefs":{"Monarch":{"xref_id":"0016451"}}}


id: PBO:0041787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping actin protein of muscle Z-line subunit alpha 1","termid":"PBO:0041787"}


id: PR:O13984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication-associated recombination protein A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase WRNIP1 homolog C26H5.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.02c","secondary_identifiers":["UniProtKB:O13984"],"synonyms":[{"name":"Spom972h-rarA","type":"exact"}],"termid":"PR:O13984"}


id: GO:0120252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a hydrocarbon, a compound consisting of carbon and hydrogen only.","definition_xrefs":["Wikipedia:Hydrocarbon","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrocarbon metabolic process","synonyms":[{"name":"hydrocarbon metabolism","type":"exact"}],"termid":"GO:0120252"}


id: PBO:0051753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate kinase 2","termid":"PBO:0051753"}


id: PBO:0063419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE3A antisense RNA 1","termid":"PBO:0063419"}


id: FYPO:0007521
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118825,118840,118846,118851,118854],"is_not":false,"summary":null,"term":"FYPO:0007521"}]},"cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of tacrolimus and magnesium chloride than normal.","definition_xrefs":["PomBase:mah","PMID:19625445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to tacrolimus and magnesium chloride","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck2delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","pmk1delta"],"synonyms":[{"name":"hypersensitive to tacrolimus and magnesium chloride","type":"exact"},{"name":"resistance to FK506 and magnesium chloride","type":"exact"},{"name":"resistance to magnesium chloride and FK506","type":"exact"},{"name":"resistance to magnesium chloride and tacrolimus","type":"exact"},{"name":"resistance to tacrolimus and MgCl2","type":"exact"},{"name":"resistance to tacrolimus and magnesium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to tacrolimus and magnesium chloride during vegetative growth","type":"exact"},{"name":"resistant to tacrolimus and magnesium chloride","type":"exact"},{"name":"viable in the presence of FK506 and chloride","type":"exact"},{"name":"vic","type":"related"}],"termid":"FYPO:0007521","terms_by_termid":{"FYPO:0007521":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0010441
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86430],"is_not":false,"summary":null,"term":"MONDO:0010441"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"is_obsolete":false,"name":"CK syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:251383","MEDGEN:463131","GARD:17210","OMIM:300831","DOID:0111898","UMLS:C3151781"],"synonyms":[{"name":"CK syndrome","type":"exact"},{"name":"CK syndrome, X-linked recessive","type":"exact"},{"name":"X-linked intellectual disability-microcephaly-cortical malformation-thin habitus syndrome","type":"exact"},{"name":"intellectual disability, X-linked, with thin body habitus and cortical malformation","type":"related"},{"name":"mental retardation, X-linked, with thin body habitus and cortical malformation","type":"related"}],"termid":"MONDO:0010441","terms_by_termid":{"MONDO:0010441":null},"xrefs":{"Monarch":{"xref_id":"0010441"}}}


id: PR:O74830
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1183.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase C1183.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.02","synonyms":[{"name":"Spom972h-SPCC1183.02","type":"exact"}],"termid":"PR:O74830"}


id: FYPO:0006373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in one or more heterochromatin islands occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:29214404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at heterochromatin island during vegetative growth","termid":"FYPO:0003746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0006373"}


id: GO:0047825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-O-sulfolactate + H2O = (R)-lactate + H+ + sulfate.","definition_xrefs":["RHEA:20337","EC:3.1.6.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-lactate-2-sulfatase activity","secondary_identifiers":["KEGG_REACTION:R01448","MetaCyc:D-LACTATE-2-SULFATASE-RXN"],"synonyms":[{"name":"(S)-2-O-sulfolactate 2-sulfohydrolase activity","type":"related"},{"name":"D-lactate-2-sulphatase activity","type":"exact"}],"termid":"GO:0047825"}


id: PBO:0084709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane carnitine transporter; required for carnitine-dependent transport of acetyl-CoA from peroxisomes to mitochondria during fatty acid beta-oxidation; human homolog SLC25A20 complements yeast null mutant","termid":"PBO:0084709"}


id: GO:0018340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-serine to peptidyl-O-(sn-1-glycerophosphoryl)-L-serine.","definition_xrefs":["RESID:AA0264"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-O-(sn-1-glycerophosphoryl)-L-serine biosynthetic process from peptidyl-serine (obsolete GO:0018340)","synonyms":[{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine anabolism from peptidyl-serine","type":"exact"},{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine formation from peptidyl-serine","type":"exact"},{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine synthesis from peptidyl-serine","type":"exact"}],"termid":"GO:0018340"}


id: PBO:0018272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family GTPase Dnm1","termid":"PBO:0018272"}


id: GO:0035311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell in the larval wing imaginal disc becomes capable of differentiating autonomously into a wing cell, if left in its normal environment.","definition_xrefs":["PMID:10860999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"wing and notum subfield formation","termid":"GO:0035309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing cell fate specification","termid":"GO:0035311"}


id: MONDO:0800355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sleep disorder","termid":"MONDO:0100081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasomnia, sleep terrors type","secondary_identifiers":["MEDGEN:462714","UMLS:C3151364"],"synonyms":[{"name":"PSMNST","type":"exact"}],"termid":"MONDO:0800355","xrefs":{"Monarch":{"xref_id":"0800355"}}}


id: GO:0097537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Y-shaped protein complex in the ciliary transition zone that connects the cilium axoneme to the ciliary necklace. Both protein sorting and protein gating occur at this point in the cilium allowing some, but not all proteins to enter the cilium.","definition_xrefs":["PMID:4554367","GOC:cilia","PMID:22653444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Y-shaped link","synonyms":[{"name":"Y-link","type":"related"},{"name":"Y-link structure","type":"related"},{"name":"Y-shaped assemblage","type":"related"},{"name":"Y-shaped fiber","type":"related"},{"name":"Y-shaped fibre","type":"related"},{"name":"Y-shaped linker","type":"related"},{"name":"membrane-microtubule complex","type":"related"}],"termid":"GO:0097537"}


id: GO:1990111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteasome specifically found in mammalian testis. Contains the proteasome activator PA200 in the regulatory particle, and beta1i, beta2i, beta5i and/or alpha4s in the core (20S) subunit. Beta1i, beta2i and beta5i are inducible catalytic subunits, closely related to beta1, beta2 and beta5. Alpha4s is a sperm-specific 20S subunit, but unlike other alternative 20S subunits alpha4s lies in the outer alpha-ring and lacks catalytic activity.","definition_xrefs":["PMID:23706739","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"spermatoproteasome complex","termid":"GO:1990111"}


id: GO:1903854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of stress response to copper ion.","definition_xrefs":["GOC:kmv","GO_REF:0000058","GOC:TermGenie","PMID:23437011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of stress response to copper ion","termid":"GO:1903853"},{"relation_name":"negatively_regulates","term_name":"stress response to copper ion","termid":"GO:1990169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stress response to copper ion","synonyms":[{"name":"down regulation of response to copper ion stress","type":"exact"},{"name":"down regulation of response to copper toxicity","type":"related"},{"name":"down regulation of stress response to copper ion","type":"exact"},{"name":"down-regulation of response to copper ion stress","type":"exact"},{"name":"down-regulation of response to copper toxicity","type":"related"},{"name":"down-regulation of stress response to copper ion","type":"exact"},{"name":"downregulation of response to copper ion stress","type":"exact"},{"name":"downregulation of response to copper toxicity","type":"related"},{"name":"downregulation of stress response to copper ion","type":"exact"},{"name":"inhibition of response to copper ion stress","type":"narrow"},{"name":"inhibition of response to copper toxicity","type":"related"},{"name":"inhibition of stress response to copper ion","type":"narrow"},{"name":"negative regulation of response to copper ion stress","type":"exact"},{"name":"negative regulation of response to copper toxicity","type":"related"}],"termid":"GO:1903854"}


id: GO:0003069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which acetylcholine signaling causes vasodilation, resulting in a change in blood pressure.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"},{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by acetylcholine","termid":"GO:0003068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"vasodilation by acetylcholine involved in regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0003069"}


id: FYPO:0005185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that contains one or more septa, has condensed chromatin, and undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PMID:8557037","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, septated cell with condensed chromatin","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, septated cell with condensed chromatin","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, septated cell with condensed chromatin","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, septated cell with condensed chromatin","type":"exact"}],"termid":"FYPO:0005185"}


id: MOD:01362
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-thiophospho-L-serine.","definition_xrefs":["PubMed:11507762","PubMed:12110917","Unimod:260#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphorylated residue","termid":"MOD:00583"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-thiophospho-L-serine","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:01362"}


id: MONDO:0005844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eyelid cyst caused by the blockage of a meibomian gland.","definition_xrefs":["NCIT:C26717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"internal hordeolum","termid":"MONDO:0004917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"chalazion","secondary_identifiers":["ICD9:373.2","MEDGEN:869","EFO:0007363","UMLS:C0007933","SCTID:1482004","DOID:9903","ICD10CM:H00.1","icd11.foundation:777918741","MESH:D017043"],"synonyms":[{"name":"Meibomian cyst","type":"related"},{"name":"chalazia","type":"related"},{"name":"chalazion","type":"exact"},{"name":"cyst, Meibomian","type":"related"},{"name":"meibomian gland lipogranuloma","type":"exact"}],"termid":"MONDO:0005844","xrefs":{"Monarch":{"xref_id":"0005844"}}}


id: PBO:0087480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromatin assembly factor I (CAF-1), with Rlf2p and Msi1p; chromatin assembly by CAF-1 is important for multiple processes including silencing at telomeres, mating type loci, and rDNA; maintenance of kinetochore structure, deactivation of the DNA damage checkpoint after DNA repair, chromatin dynamics during transcription; and repression of divergent transcription; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087480"}


id: PBO:0089982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor, meiosis specific","termid":"PBO:0089982"}


id: GO:0046615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The resumption of the Saccharomyces mitotic cell division cycle by pheromone-arrested cells that have not mated.","definition_xrefs":["PMID:9927449","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete re-entry into mitotic cell cycle after pheromone arrest (sensu Saccharomyces) (obsolete GO:0046615)","synonyms":[{"name":"re-entry into mitotic cell cycle after pheromone arrest (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0046615"}


id: PBO:0049573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.W histone 1","termid":"PBO:0049573"}


id: MONDO:1010532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, rabbit","secondary_identifiers":["OMIA:000197-9986"],"termid":"MONDO:1010532","xrefs":{"Monarch":{"xref_id":"1010532"}}}


id: PBO:0090280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC ubiquitin ligase complex WD repeat protein Rik1","termid":"PBO:0090280"}


id: PR:O13710
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02171","PANTHER:PTHR19306:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.02c","secondary_identifiers":["UniProtKB:O13710"],"synonyms":[{"name":"DNA repair protein spr18 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SMC partner of rad18 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SMC5","type":"exact"}],"termid":"PR:O13710"}


id: PBO:0076346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 13","termid":"PBO:0076346"}


id: PBO:0084998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N alpha-acetyl-transferase; involved in acetylation of the N-terminal residues of histones H4 and H2A","termid":"PBO:0084998"}


id: PBO:0064382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 4","termid":"PBO:0064382"}


id: PBO:0028329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_telomere_separation","termid":"PBO:0028329"}


id: PBO:0055727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain only 1","termid":"PBO:0055727"}


id: PBO:0068582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 33, pseudogene","termid":"PBO:0068582"}


id: PBO:0080557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP2 N-terminal like","termid":"PBO:0080557"}


id: MONDO:0009128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, intellectual disability, and eye abnormality","secondary_identifiers":["MEDGEN:208664","Orphanet:2650","OMIM:223540","MESH:C535809","UMLS:C0796076"],"synonyms":[{"name":"Mollica syndrome","type":"related"},{"name":"dwarfism, intellectual disability, and eye abnormality","type":"exact"},{"name":"dwarfism, mental retardation, and eye abnormality","type":"exact"}],"termid":"MONDO:0009128","xrefs":{"Monarch":{"xref_id":"0009128"}}}


id: PBO:0041276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 3","termid":"PBO:0041276"}


id: PBO:0074064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A39 pseudogene 2","termid":"PBO:0074064"}


id: MONDO:0006932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Accumulation of fluid in the lung tissues causing disturbance of the gas exchange that may lead to respiratory failure. It is caused by direct injury to the lung parenchyma or congestive heart failure. The symptoms may appear suddenly or gradually. Suddenly appearing symptoms include difficulty breathing, feeling of suffocation, and coughing associated with frothy sputum. Gradually appearing symptoms include difficulty breathing while lying in bed, shortness of breath during activity, and weight gain (in patients with congestive heart failure).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute respiratory failure","termid":"MONDO:0001208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary edema","secondary_identifiers":["MESH:D011654","NCIT:C26868","SCTID:19242006","DOID:11396","UMLS:C0034063","ICD10CM:J81","EFO:1001134","MEDGEN:11026","MedDRA:10037375"],"synonyms":[{"name":"edema, pulmonary","type":"exact"}],"termid":"MONDO:0006932","xrefs":{"Monarch":{"xref_id":"0006932"}}}


id: PBO:0004184
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exchange Factor Cdc25-like","termid":"PBO:0004184"}


id: GO:0004733
data:
  {"annotated_genes":["SJAG_00707","SJAG_01881"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87243,111279],"is_not":false,"summary":null,"term":"GO:0004733"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxamine 5'-phosphate + H2O + O2 = pyridoxal 5'-phosphate + NH4+ + hydrogen peroxide. This activity can also oxidize pyridoxine 5'-phosphate to pyridoxal 5'-phosphate + hydrogen peroxide.","definition_xrefs":["PMID:11786019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","termid":"GO:0016641"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyridoxamine phosphate oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.4.3.5","Reactome:R-HSA-965079","RHEA:15817","MetaCyc:PMPOXI-RXN","Reactome:R-HSA-965019"],"synonyms":[{"name":"PMP oxidase activity","type":"related"},{"name":"pyridoxal 5'-phosphate synthase activity","type":"related"},{"name":"pyridoxamine 5'-phosphate oxidase activity","type":"related"},{"name":"pyridoxamine-5'-phosphate:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"pyridoxamine-phosphate oxidase activity","type":"related"},{"name":"pyridoxaminephosphate oxidase deaminating","type":"related"},{"name":"pyridoxine (pyridoxamine) 5'-phosphate oxidase activity","type":"related"},{"name":"pyridoxine (pyridoxamine)phosphate oxidase activity","type":"related"}],"termid":"GO:0004733","terms_by_termid":{"GO:0004733":null}}


id: PBO:0087591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; required for cortical localization of calmodulin","termid":"PBO:0087591"}


id: MONDO:0015713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic endocrine disease (obsolete MONDO:0015513)","termid":"MONDO:0015513"},{"relation_name":"excluded_subClassOf","term_name":"obsolete anomaly of puberty or/and menstrual cycle of genetic origin (obsolete MONDO:0016072)","termid":"MONDO:0016072"},{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic central precocious puberty","secondary_identifiers":["MEDGEN:575094","SCTID:237817008","Orphanet:169615","UMLS:C0342544","NCIT:C120372","ICD9:259.1"],"termid":"MONDO:0015713","xrefs":{"Monarch":{"xref_id":"0015713"}}}


id: GO:0046887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"hormone secretion","termid":"GO:0046879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of hormone secretion","synonyms":[{"name":"activation of hormone secretion","type":"narrow"},{"name":"stimulation of hormone secretion","type":"narrow"},{"name":"up regulation of hormone secretion","type":"exact"},{"name":"up-regulation of hormone secretion","type":"exact"},{"name":"upregulation of hormone secretion","type":"exact"}],"termid":"GO:0046887"}


id: PBO:0067492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 627, pseudogene","termid":"PBO:0067492"}


id: PBO:0088655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K4 methyltransferase Set1","termid":"PBO:0088655"}


id: MONDO:0001408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuropathy that is caused by inadequate blood supply.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"ischemic neuropathy","secondary_identifiers":["SCTID:129611009","DOID:1195","MEDGEN:116055","NCIT:C27025","UMLS:C0238309","ICD9:356.9"],"synonyms":[{"name":"ischaemic peripheral neuropathy","type":"exact"},{"name":"ischemic peripheral neuropathy","type":"exact"}],"termid":"MONDO:0001408","xrefs":{"Monarch":{"xref_id":"0001408"}}}


id: PBO:0041885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 3","termid":"PBO:0041885"}


id: MONDO:0011342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SLC35A1-CDG is an extremely rare form of CDG syndrome characterized clinically in the single reported case by repeated hemorrhagic incidents, including severe pulmonary hemorrhage.","definition_xrefs":["Orphanet:238459"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"SLC35A1-congenital disorder of glycosylation","secondary_identifiers":["MEDGEN:370234","MESH:C567040","OMIM:603585","UMLS:C1970344","DOID:0070258","SCTID:723624008","GARD:12409"],"synonyms":[{"name":"CDG IIf","type":"related"},{"name":"CDG syndrome type IIf","type":"exact"},{"name":"CDG-IIf","type":"exact"},{"name":"CDG2F","type":"exact"},{"name":"CMP-sialic acid transporter deficiency","type":"exact"},{"name":"SLC35A1-CDG","type":"exact"},{"name":"SLC35A1-CDG (CDG-IIf)","type":"related"},{"name":"SLC35A1-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIf","type":"exact"},{"name":"congenital disorder of glycosylation type 2f","type":"exact"},{"name":"congenital disorder of glycosylation type IIf","type":"exact"},{"name":"congenital disorder of glycosylation, type IIf","type":"related"}],"termid":"MONDO:0011342","xrefs":{"Monarch":{"xref_id":"0011342"}}}


id: PATO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An acidity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"acidity","termid":"PATO:0001842"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased acidity","synonyms":[{"name":"high acidity","type":"exact"}],"termid":"PATO:0001844"}


id: PBO:0066580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of hemoglobinization and erythroid cell expansion","termid":"PBO:0066580"}


id: MONDO:0003492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal gland carcinoma","termid":"MONDO:0002463"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"lacrimal gland squamous cell carcinoma","secondary_identifiers":["MEDGEN:233607","UMLS:C1334360","DOID:5529","NCIT:C6092"],"synonyms":[{"name":"epidermoid carcinoma of lacrimal gland","type":"exact"},{"name":"epidermoid carcinoma of the lacrimal gland","type":"exact"},{"name":"lacrimal gland epidermoid carcinoma","type":"exact"},{"name":"lacrimal gland squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of lacrimal gland","type":"exact"},{"name":"squamous cell carcinoma of the lacrimal gland","type":"exact"}],"termid":"MONDO:0003492","xrefs":{"Monarch":{"xref_id":"0003492"}}}


id: MONDO:0044215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arm folding preference (obsolete MONDO:0044215)","secondary_identifiers":["OMIM:107850"],"synonyms":[{"name":"ARM folding preference","type":"related"}],"termid":"MONDO:0044215","xrefs":{"Monarch":{"xref_id":"0044215"}}}


id: GO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by a carbon dioxide stimulus is received and converted to a molecular signal by the vasomotor center of the central nervous system.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbon dioxide","termid":"GO:0003031"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by ischemic conditions","termid":"GO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of carbon dioxide by vasomotor center","termid":"GO:0002013"}


id: PBO:0057954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3677 and MIR940 host gene","termid":"PBO:0057954"}


id: GO:0030644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of chloride ions within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic anion homeostasis","termid":"GO:0030002"},{"relation_name":"is_a","term_name":"chloride ion homeostasis","termid":"GO:0055064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular chloride ion homeostasis","synonyms":[{"name":"cellular chloride ion homeostasis","type":"exact"}],"termid":"GO:0030644"}


id: GO:0070098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a chemokine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to chemokine","termid":"GO:1990869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"chemokine-mediated signaling pathway","synonyms":[{"name":"chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070098"}


id: GO:0030712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of border follicle cell delamination","termid":"GO:0030710"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of border follicle cell delamination","synonyms":[{"name":"down regulation of border follicle cell delamination","type":"exact"},{"name":"down-regulation of border follicle cell delamination","type":"exact"},{"name":"downregulation of border follicle cell delamination","type":"exact"},{"name":"inhibition of border follicle cell delamination","type":"narrow"},{"name":"negative regulation of border cell delamination","type":"broad"}],"termid":"GO:0030712"}


id: GO:0044620
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000036"}]},"cv_name":"molecular_function","definition":"Binding to the attachment site of the phosphopantetheine prosthetic group of an acyl carrier protein (ACP).","definition_xrefs":["GOC:vw","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prosthetic group binding","termid":"GO:0051192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ACP phosphopantetheine attachment site binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044620","terms_by_termid":{"GO:0000036":null}}


id: PBO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein Mam3","termid":"PBO:0001214"}


id: GO:0052745
data:
  {"annotated_genes":["SJAG_04545","SJAG_03739","SJAG_01702","SJAG_00063","SJAG_01970","SJAG_04067","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88236,106381,106382],"is_not":false,"summary":null,"term":"GO:0052745"},{"annotations":[76799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008934"},{"annotations":[107756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990651"},{"annotations":[107757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990649"},{"annotations":[107758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052659"},{"annotations":[114987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052829"},{"annotations":[110619,107759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052658"},{"annotations":[114988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004441"},{"annotations":[107760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990650"},{"annotations":[107761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990640"},{"annotations":[107762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990648"},{"annotations":[107763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030487"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphate(n) + H2O = inositol phosphate(n-1) + phosphate. This reaction is the removal of a phosphate group from an inositol phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_01702":null,"SJAG_01970":null,"SJAG_03739":null,"SJAG_04067":null,"SJAG_04545":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0052745","terms_by_termid":{"GO:0004441":null,"GO:0008934":null,"GO:0030487":null,"GO:0052658":null,"GO:0052659":null,"GO:0052745":null,"GO:0052829":null,"GO:1990640":null,"GO:1990648":null,"GO:1990649":null,"GO:1990650":null,"GO:1990651":null}}


id: PBO:0005104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar SNARE Vam7 (predicted)","termid":"PBO:0005104"}


id: PBO:0029636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_stubby_vegetative_cell","termid":"PBO:0029636"}


id: MONDO:0011714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial lipodystrophy, congenital cataracts, and neurodegeneration syndrome","secondary_identifiers":["UMLS:C3807567","MEDGEN:813897","OMIM:606721","GARD:18038"],"synonyms":[{"name":"LCCNS","type":"related"},{"name":"lipodystrophy, familial partial, type 7","type":"exact"},{"name":"lipodystrophy, partial, with congenital cataracts and neurodegeneration","type":"related"},{"name":"partial lipodystrophy, congenital cataracts, and neurodegeneration syndrome","type":"exact"}],"termid":"MONDO:0011714","xrefs":{"Monarch":{"xref_id":"0011714"}}}


id: GO:0102779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cannabigerolate + O2 = cannabidiolate + hydrogen peroxide.","definition_xrefs":["GOC:pz","RHEA:34411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cannabidiolate synthase activity","secondary_identifiers":["EC:1.21.3.8","MetaCyc:RXN-7855"],"termid":"GO:0102779"}


id: PBO:0029802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cables","termid":"PBO:0029802"}


id: SO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a serine anticodon, and a 3' serine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"serine_tRNA_primary_transcript","termid":"SO:0000226"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seryl_tRNA","synonyms":[{"name":"seryl tRNA","type":"exact"},{"name":"seryl-transfer RNA","type":"exact"},{"name":"seryl-transfer ribonucleic acid","type":"related"}],"termid":"SO:0000269"}


id: MONDO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic, usually bacterial infectious process affecting the endometrium. It may extend to the myometrium and parametrial tissues. Symptoms include lower abdominal pain, vaginal discharge, and vaginal bleeding.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"mucositis","termid":"MONDO:0020579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometritis","secondary_identifiers":["SCTID:78623009","EFO:1001312","UMLS:C0014179","NCIT:C26764","DOID:1002","MEDGEN:41789","MESH:D004716"],"synonyms":[{"name":"endometrium inflammation","type":"exact"},{"name":"inflammation of endometrium","type":"exact"},{"name":"uterine infection","type":"exact"}],"termid":"MONDO:0000918","xrefs":{"Monarch":{"xref_id":"0000918"}}}


id: PBO:0074375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 1","termid":"PBO:0074375"}


id: FYPO:0006649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which 5'-3' DNA/RNA helicase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 5'-3' DNA/RNA helicase activity","termid":"FYPO:0006647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished 5'-3' DNA/RNA helicase activity","synonyms":[{"name":"5'-3' DNA/RNA helicase activity abolished","type":"exact"}],"termid":"FYPO:0006649"}


id: PBO:0032754
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gap for YPt","termid":"PBO:0032754"}


id: GO:0006922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic degradation of lamins during apoptosis, leading to the irreversible breakdown of the nuclear lamina.","definition_xrefs":["ISBN:0815332181","GOC:mah","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage of lamin involved in execution phase of apoptosis (obsolete GO:0006922)","synonyms":[{"name":"cleavage of lamin","type":"broad"},{"name":"cleavage of lamin involved in execution phase of apoptosis","type":"exact"}],"termid":"GO:0006922"}


id: GO:0160068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of pollen tube guidance towards ovules. This is one mechanism to prevent polytuby, the simultaneous penetration of ovules by multiple pollen tubes.","definition_xrefs":["PMID:33790463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis","termid":"GO:0050928"},{"relation_name":"negatively_regulates","term_name":"pollen tube guidance","termid":"GO:0010183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pollen tube guidance","synonyms":[{"name":"prevention of polytuby","type":"broad"}],"termid":"GO:0160068"}


id: MONDO:0013575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma fibronectin deficiency","secondary_identifiers":["MEDGEN:436433","OMIM:614101","UMLS:C2675436"],"synonyms":[{"name":"plasma fibronectin deficiency","type":"exact"}],"termid":"MONDO:0013575","xrefs":{"Monarch":{"xref_id":"0013575"}}}


id: PBO:0057045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 134","termid":"PBO:0057045"}


id: MONDO:0010961
data:
  {"annotated_genes":["SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84735],"is_not":false,"summary":null,"term":"MONDO:0010961"}]},"cv_name":"mondo","definition":"Prohormone convertase-I deficiency is the rarest form of monogenic obesity. The disorder is characterized by severe childhood obesity, hypoadrenalism, reactive hypoglycaemia, and elevated circulating levels of certain prohormones.","definition_xrefs":["Orphanet:71528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"inherited obesity","termid":"MONDO:0019182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"obesity due to prohormone convertase I deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1833053","SCTID:722053001","DOID:0111698","GARD:16689","MESH:C563423","OMIM:600955","NORD:109523","MEDGEN:318777"],"synonyms":[{"name":"PCI deficiency","type":"exact"},{"name":"PCSK1 Deficiency","type":"exact"},{"name":"obesity and endocrinopathy due to impaired processing of prohormones","type":"related"},{"name":"obesity with impaired prohormone processing","type":"exact"},{"name":"proprotein convertase 1/3 deficiency","type":"related"}],"termid":"MONDO:0010961","terms_by_termid":{"MONDO:0010961":null},"xrefs":{"Monarch":{"xref_id":"0010961"}}}


id: GO:0051115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient uridylylation of peptidyl-histidine to form 1'-(phospho-5'-uridine)-L-histidine (otherwise known as tau-UMP-histidine, tele-UMP-histidine).","definition_xrefs":["RESID:AA0372"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 1'-(phospho-5'-uridine)-L-histidine (obsolete GO:0051115)","termid":"GO:0051115"}


id: PBO:0067923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 225","termid":"PBO:0067923"}


id: MONDO:0019785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 15q24 microdeletion syndrome (obsolete MONDO:0019785)","termid":"MONDO:0019785","xrefs":{"Monarch":{"xref_id":"0019785"}}}


id: PBO:0070650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 21","termid":"PBO:0070650"}


id: GO:0050765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phagocytosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"negatively_regulates","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of phagocytosis","synonyms":[{"name":"down regulation of phagocytosis","type":"exact"},{"name":"down-regulation of phagocytosis","type":"exact"},{"name":"downregulation of phagocytosis","type":"exact"},{"name":"inhibition of phagocytosis","type":"narrow"}],"termid":"GO:0050765"}


id: PBO:0109277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3112","termid":"PBO:0109277"}


id: GO:0140292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (ADP-D-ribosyl)-L-seryl-[protein] + H2O = L-seryl-[protein] + ADP-ribose.","definition_xrefs":["PMID:29234005","PMID:28650317","RHEA:58256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"ADP-ribosylserine hydrolase activity","termid":"GO:0140292"}


id: GO:0039685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral DNA replication process where a 3' hairpin structure in the viral single-stranded DNA (ssDNA) template serves as a primer for host enzymes to synthesize DNA.","definition_xrefs":["VZ:2656","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"rolling hairpin viral DNA replication","synonyms":[{"name":"ssDNA rolling hairpin viral DNA replication","type":"exact"}],"termid":"GO:0039685"}


id: PBO:0046907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member B","termid":"PBO:0046907"}


id: MONDO:0023006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"doxorubicin induced cardiomyopathy","secondary_identifiers":["GARD:6285"],"termid":"MONDO:0023006","xrefs":{"Monarch":{"xref_id":"0023006"}}}


id: MONDO:0017234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of prion disease that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"excluded_subClassOf","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"name":"obsolete inherited prion disease (obsolete MONDO:0017234)","secondary_identifiers":["NANDO:1200188","Orphanet:280400"],"synonyms":[{"name":"familial prion disease","type":"exact"},{"name":"hereditary prion disease","type":"exact"}],"termid":"MONDO:0017234","xrefs":{"Monarch":{"xref_id":"0017234"}}}


id: FYPO:0002677
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118842,118850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[118849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[118845,118841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[118838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[118835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02592":null,"SJAG_04551":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein phosphorylation","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787","SJAG_04551","SJAG_00610","SJAG_02592"],"single_locus_genotype_uniquenames":["pck2delta","sty1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"termid":"FYPO:0002677","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null}}


id: PBO:0110417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNCRIP pseudogene 1","termid":"PBO:0110417"}


id: PATO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being smaller and contracted, expecially due to loss of moisture.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shriveled","termid":"PATO:0002460"}


id: MONDO:1011447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Waardenburg syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, non-human animal","secondary_identifiers":["OMIA:001059"],"termid":"MONDO:1011447","xrefs":{"Monarch":{"xref_id":"1011447"}}}


id: PBO:0059904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 27","termid":"PBO:0059904"}


id: MONDO:0032689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 85","secondary_identifiers":["UMLS:C5193041","DOID:0112142","GARD:16342","MEDGEN:1682947","OMIM:618345"],"synonyms":[{"name":"RETINITIS PIGMENTOSA 85","type":"related"},{"name":"RP85","type":"related"}],"termid":"MONDO:0032689","xrefs":{"Monarch":{"xref_id":"0032689"}}}


id: PBO:0059753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 27","termid":"PBO:0059753"}


id: PBO:0077480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200C","termid":"PBO:0077480"}


id: FYPO:0005756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mannosylinositol phosphorylceramide (MIPC) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular mannosylinositol phosphorylceramide level","synonyms":[{"name":"normal cellular MIPC level","type":"exact"},{"name":"normal cellular mannose-inositol-phosphoceramide level","type":"exact"},{"name":"normal cellular mannosylinositol phosphorylceramide accumulation","type":"related"},{"name":"normal cellular mannosylinositol phosphorylceramide level during mitotic cell cycle","type":"related"},{"name":"normal cellular mannosylinositol phosphorylceramide level during vegetative growth","type":"exact"}],"termid":"FYPO:0005756"}


id: PBO:0051480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (V)-66 (pseudogene)","termid":"PBO:0051480"}


id: GO:0031312
data:
  {"annotated_genes":["SJAG_01249","SJAG_03563","SJAG_03456","SJAG_00655","SJAG_00933","SJAG_00852","SJAG_02699","SJAG_04000","SJAG_01043","SJAG_00230","SJAG_05398","SJAG_00721","SJAG_00576","SJAG_04642"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99946,103248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099616"},{"annotations":[89144,100770,116536,107627,108965,102721,106326,105674,114311,90389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031314"},{"annotations":[106680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031315"},{"annotations":[94126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097629"},{"annotations":[94127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097632"}]},"cv_name":"cellular_component","definition":"The component of an organelle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"intracellular organelle","termid":"GO:0043229"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_00655":null,"SJAG_00721":null,"SJAG_00852":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01249":null,"SJAG_02699":null,"SJAG_03456":null,"SJAG_03563":null,"SJAG_04000":null,"SJAG_04642":null,"SJAG_05398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of organelle membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to organelle membrane","type":"narrow"}],"termid":"GO:0031312","terms_by_termid":{"GO:0031314":null,"GO:0031315":null,"GO:0097629":null,"GO:0097632":null,"GO:0099616":null}}


id: PBO:0056800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056800"}


id: MONDO:0005944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by rhabdoviridae. Important infections include rabies; ephemeral fever; and vesicular stomatitis.","definition_xrefs":["MESH:D018353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mononegavirales infectious disease","termid":"MONDO:0005856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhabdoviridae infectious disease","secondary_identifiers":["MEDGEN:60221","EFO:0007469","UMLS:C0206751"],"synonyms":[{"name":"Rhabdoviridae infection","type":"related"},{"name":"infection, Rhabdoviridae","type":"related"},{"name":"infections, Rhabdoviridae","type":"related"}],"termid":"MONDO:0005944","xrefs":{"Monarch":{"xref_id":"0005944"}}}


id: MONDO:0015306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lemierre syndrome is a rare, potentially lethal, oropharyngeal infectious disease occurring in immunocompetent adolescents and young adults that is mainly due to Fusobacterium necrophorum and that is characterized by septic thrombophlebitis of the internal jugular vein that leads to septic, usually pulmonary, embolism, associated with ENT (ear, nose, and throat) infection that manifests with fever, neck pain, and tonsillopharyngitis.","definition_xrefs":["Orphanet:137839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"bacterial infectious disease with sepsis","termid":"MONDO:0005229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lemierre syndrome","secondary_identifiers":["GARD:6882","MESH:D057831","ICD9:040.3","SCTID:52542005","UMLS:C0027537","DOID:11337","MEDGEN:6541","MedDRA:10065552"],"synonyms":[{"name":"Lemierre postanginal sepsis","type":"exact"},{"name":"Lemierre syndrome","type":"exact"},{"name":"Lemierre's syndrome","type":"related"},{"name":"acute sore throat","type":"related"},{"name":"human necrobacillosis","type":"exact"},{"name":"necrobacillosis","type":"related"},{"name":"oropharyngeal infection leading to secondary septic thrombophlebitis of the internal jugular vein","type":"related"},{"name":"postanginal sepsis","type":"exact"},{"name":"postanginal sepsis secondary to orophyngeal infection","type":"exact"},{"name":"septic phlebitis of the internal jugular vein","type":"exact"}],"termid":"MONDO:0015306","xrefs":{"Monarch":{"xref_id":"0015306"}}}


id: PBO:0054364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1757","termid":"PBO:0054364"}


id: GO:0103011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + beta-D-fructofuranose 6-phosphate = mannosylfructose-phosphate + GDP.","definition_xrefs":["GOC:pz","EC:2.4.1.246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"mannosylfructose-phosphate synthase activity","secondary_identifiers":["RHEA:26039","MetaCyc:RXN-9935"],"termid":"GO:0103011"}


id: PBO:0003885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein Pdp1","termid":"PBO:0003885"}


id: PBO:0054275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1665","termid":"PBO:0054275"}


id: PBO:0087378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol-binding beta-propeller protein; physically associates with sterol-binding StARkin domain-containing proteins Ysp2/Lam2/Ltc4 and Lam4/Ltc3; essential for retrograde transport of ergosterol from the plasma membrane to the endoplasmic reticulum at ER-PM contact sites; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; non-essential gene; has a paralog, DGR2, that arose from the whole genome duplication","termid":"PBO:0087378"}


id: MONDO:0021172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atypical form of Timothy syndrome, causes a more severe form of long QT syndrome and a greater risk of arrhythmia and sudden death.","direct_ancestors":[{"relation_name":"is_a","term_name":"Timothy syndrome","termid":"MONDO:0010979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"Timothy syndrome, atypical type","secondary_identifiers":["MEDGEN:1805271","GARD:22382","ICD10CM:I49.8","SCTID:719907006","Orphanet:595109","UMLS:C5575746"],"synonyms":[{"name":"ATS","type":"exact"},{"name":"Atypical LQT8","type":"exact"},{"name":"Timothy syndrome type 2 (disorder)","type":"exact"},{"name":"atypical Timothy syndrome","type":"exact"}],"termid":"MONDO:0021172","xrefs":{"Monarch":{"xref_id":"0021172"}}}


id: GO:0043799
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114197],"is_not":false,"summary":null,"term":"GO:0043799"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) glycine + H2O + O2 = glyoxylate + NH3 + hydrogen peroxide; (2) D-alanine + H2O + O2 = pyruvate + NH3 + hydrogen peroxide; (3) sarcosine + H2O + O2 = glyoxylate + methylamine + hydrogen peroxide; (4) N-ethylglycine + H2O + O2 = glyoxylate + ethylamine + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aliphatic amine oxidase activity","termid":"GO:0052595"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glycine oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycine:oxygen oxidoreductase (deaminating)","type":"exact"}],"termid":"GO:0043799","terms_by_termid":{"GO:0043799":null}}


id: GO:0022403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"One of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell cycle phase","termid":"GO:0022403"}


id: MONDO:0007927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"macroglossia","termid":"MONDO:0015496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital macroglossia","secondary_identifiers":["ICD9:750.15","Orphanet:2430","SCTID:270516002","icd11.foundation:423141418","MEDGEN:3588","GARD:16599","OMIM:153630","MESH:C531735","UMLS:C0009677"],"synonyms":[{"name":"macroglossia","type":"related"}],"termid":"MONDO:0007927","xrefs":{"Monarch":{"xref_id":"0007927"}}}


id: GO:0032944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mononuclear cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"regulates","term_name":"mononuclear cell proliferation","termid":"GO:0032943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mononuclear cell proliferation","synonyms":[{"name":"regulation of PBMC proliferation","type":"narrow"},{"name":"regulation of peripheral blood mononuclear cell proliferation","type":"narrow"}],"termid":"GO:0032944"}


id: PBO:0017959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGI-48 family Utp18 (predicted)","termid":"PBO:0017959"}


id: FYPO:0007533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which arrested replication forks colocalize normally (i.e. indistinguishably from wild type) with nuclear pore complexes (NPCs). Normally, arrested replication forks relocate to NPCs as part of replication fork processing, and remain anchored at NPCs while recombination-dependent replication takes place.","definition_xrefs":["PomBase:mah","PMID:33159083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal replication fork processing","termid":"FYPO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal replication fork colocalization with nuclear pore complex","synonyms":[{"name":"normal replication fork colocalization with NPC","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore complex during mitotic S phase","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore complex during mitotic cell cycle","type":"related"},{"name":"normal replication fork colocalization with nuclear pore complex during vegetative growth","type":"exact"},{"name":"normal replication fork relocation to nuclear pore complex","type":"exact"},{"name":"normal replication fork relocation to nuclear pore complex during mitotic S phase","type":"exact"}],"termid":"FYPO:0007533"}


id: MONDO:0020697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung carcinoma arising within the bronchi or bronchial tubes. It is characterized by the presence of myoepithelial cells, spindle cells, clear cells, and duct-forming epithelial cells. Surgical resection may be curative.","definition_xrefs":["NCIT:C45545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-myoepithelial carcinoma","termid":"MONDO:0003389"},{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung epithelial-myoepithelial carcinoma","secondary_identifiers":["MEDGEN:353868","UMLS:C1708770"],"synonyms":[{"name":"lung epithelial-myoepithelial cancer","type":"exact"},{"name":"lung epithelial-myoepithelial carcinoma","type":"exact"}],"termid":"MONDO:0020697","xrefs":{"Monarch":{"xref_id":"0020697"}}}


id: PBO:0046477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 2, TFIIH core complex helicase subunit","termid":"PBO:0046477"}


id: MONDO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectrodactyly, ectodermal dysplasia, and cleft lip/palate syndrome (obsolete MONDO:0000187)","termid":"MONDO:0000187","xrefs":{"Monarch":{"xref_id":"0000187"}}}


id: PR:Q9UTH8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTH8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein sfp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16.05c","synonyms":[{"name":"Spom972h-sfp1","type":"exact"}],"termid":"PR:Q9UTH8"}


id: PR:Q10445
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp41 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.12c","synonyms":[{"name":"Spom972h-rhp41","type":"exact"}],"termid":"PR:Q10445"}


id: GO:0019648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway in which formaldehyde is used as a carbon source in the xylulose monophosphate cycle. Methylotrophic yeasts, but not bacteria, utilize the xylulose monophosphate cycle to fix formaldehyde and convert it into metabolically useful organic compounds.","definition_xrefs":["MetaCyc:P185-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde assimilation","termid":"GO:0019649"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate metabolic process","termid":"GO:0051167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formaldehyde assimilation via xylulose monophosphate cycle","synonyms":[{"name":"formaldehyde assimilation via xylulose-5-phosphate cycle","type":"exact"},{"name":"formaldehyde fixation cycle","type":"exact"}],"termid":"GO:0019648"}


id: GO:0008356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The asymmetric division of cells to produce two daughter cells with different developmental potentials. It is of fundamental significance for the generation of cell diversity.","definition_xrefs":["PMID:11672519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric cell division","secondary_identifiers":["Wikipedia:Asymmetric_cell_division"],"synonyms":[{"name":"asymmetric cytokinesis","type":"related"},{"name":"asymmetrical cell division","type":"exact"},{"name":"asymmetrical cytokinesis","type":"related"}],"termid":"GO:0008356"}


id: GO:0033474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an indole-3-acetic acid conjugate, a form of indoleacetic acid covalently bound to another molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin biosynthetic process","termid":"GO:0009851"},{"relation_name":"is_a","term_name":"indoleacetic acid conjugate metabolic process","termid":"GO:0033473"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"indoleacetic acid conjugate biosynthetic process","synonyms":[{"name":"IAA conjugate biosynthetic process","type":"exact"},{"name":"indole acetic acid conjugate biosynthesis","type":"exact"},{"name":"indole acetic acid conjugate biosynthetic process","type":"exact"},{"name":"indoleacetic acid conjugate anabolism","type":"exact"},{"name":"indoleacetic acid conjugate biosynthesis","type":"exact"},{"name":"indoleacetic acid conjugate formation","type":"exact"},{"name":"indoleacetic acid conjugate synthesis","type":"exact"}],"termid":"GO:0033474"}


id: PBO:0043945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin alpha B","termid":"PBO:0043945"}


id: GO:1990423
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A kinetochore component required for both meiotic and mitotic spindle assembly checkpoints.","definition_xrefs":["PMID:20462495","PMID:12686595","PMID:15922598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"kinetochore","termid":"GO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0000776","GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RZZ complex","synonyms":[{"name":"Rod-Zwilch-Zw10 complex","type":"exact"}],"termid":"GO:1990423"}


id: GO:0034860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-mercaptobenzothiazole + reduced acceptor = benzothiazole + hydrogen sulfide + oxidized acceptor.","definition_xrefs":["UM-BBD_reactionID:r1288"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-mercaptobenzothiazole desulfurase activity (obsolete GO:0034860)","termid":"GO:0034860"}


id: MONDO:0850014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twin-reversed arterial perfusion sequence","secondary_identifiers":["GARD:22446","UMLS:C5575500","MEDGEN:1842726","Orphanet:617297"],"termid":"MONDO:0850014","xrefs":{"Monarch":{"xref_id":"0850014"}}}


id: PBO:0058997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLX pseudogene 1","termid":"PBO:0058997"}


id: PBO:0059358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 3","termid":"PBO:0059358"}


id: PBO:0036473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazoleglycerol-phosphate synthase His4","termid":"PBO:0036473"}


id: PBO:0082251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins","termid":"PBO:0082251"}


id: MONDO:0002898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the zone of skin","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system cancer","termid":"MONDO:0000653"},{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin cancer","secondary_identifiers":["ICD9:173.9","SCTID:372130007","ICD10CM:C43-C44","MEDGEN:40101","NCIT:C2920","UMLS:C0007114","ICD9:173.8","DOID:4159"],"synonyms":[{"name":"CA - skin cancer","type":"exact"},{"name":"cancer of skin","type":"related"},{"name":"cancer of zone of skin","type":"exact"},{"name":"malignant neoplasm of skin","type":"exact"},{"name":"malignant neoplasm of the skin","type":"exact"},{"name":"malignant neoplasm of zone of skin","type":"exact"},{"name":"malignant skin neoplasm","type":"exact"},{"name":"malignant skin tumor","type":"exact"},{"name":"malignant skin tumour","type":"exact"},{"name":"malignant tumor of skin","type":"exact"},{"name":"malignant tumor of the skin","type":"exact"},{"name":"malignant tumour of skin","type":"exact"},{"name":"malignant tumour of the skin","type":"exact"},{"name":"malignant zone of skin neoplasm","type":"exact"},{"name":"melanoma and non-melanoma skin cancer","type":"exact"},{"name":"skin cancer","type":"exact"},{"name":"skin cancer, Including melanoma","type":"exact"},{"name":"skin neoplasm, malignant","type":"exact"},{"name":"zone of skin cancer","type":"exact"}],"termid":"MONDO:0002898","xrefs":{"Monarch":{"xref_id":"0002898"}}}


id: PBO:0077522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 237","termid":"PBO:0077522"}


id: GO:0050795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli.","definition_xrefs":["GOC:go_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of behavior","synonyms":[{"name":"regulation of behaviour","type":"exact"}],"termid":"GO:0050795"}


id: FYPO:0006138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of cis-aconitate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular cis-aconitate level","synonyms":[{"name":"increased cellular cis-aconitate level during mitotic cell cycle","type":"related"},{"name":"increased cellular cis-aconitate level during vegetative growth","type":"exact"},{"name":"increased cellular cis-aconitate(3-) anion level","type":"exact"},{"name":"increased cis-aconitate accumulation","type":"related"}],"termid":"FYPO:0006138"}


id: GO:0007209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by tachykinin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"tachykinin receptor signaling pathway","termid":"GO:0007217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating tachykinin receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by tachykinin receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by tachykinin receptor signalling pathway","type":"related"},{"name":"tachykinin receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0007209"}


id: PBO:0051132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2-70D","termid":"PBO:0051132"}


id: MONDO:0007049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acroleukopathy, symmetric","secondary_identifiers":["UMLS:C1863342","MESH:C566322","MEDGEN:350143","OMIM:102000"],"synonyms":[{"name":"acroleukopathy, symmetric","type":"exact"}],"termid":"MONDO:0007049","xrefs":{"Monarch":{"xref_id":"0007049"}}}


id: PBO:0050223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 1","termid":"PBO:0050223"}


id: PBO:0044281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 4","termid":"PBO:0044281"}


id: PBO:0014284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimin, ribonuclease involved in priRNA formation Tri1","termid":"PBO:0014284"}


id: GO:0047978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hexadecanol + NAD+ = hexadecanal + NADH.","definition_xrefs":["MetaCyc:HEXADECANOL-DEHYDROGENASE-RXN","EC:1.1.1.164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hexadecanol (NAD+) dehydrogenase activity","secondary_identifiers":["RHEA:22056"],"synonyms":[{"name":"hexadecanol dehydrogenase activity","type":"broad"},{"name":"hexadecanol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047978"}


id: PBO:0004591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S18 (predicted)","termid":"PBO:0004591"}


id: SO:0000577
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of chromosome where the spindle fibers attach during mitosis and meiosis.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere","secondary_identifiers":["http://en.wikipedia.org/wiki/Centromere"],"synonyms":[{"name":"INSDC_feature:centromere","type":"exact"}],"termid":"SO:0000577"}


id: PR:G2TRL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wip1 gene.","definition_xrefs":["UniProtKB:G2TRL2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-fold domain-containing protein new1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.15","synonyms":[{"name":"Spom972h-wip1","type":"exact"}],"termid":"PR:G2TRL2"}


id: PATO:0001859
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coordinated","termid":"PATO:0000769"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased coordination","synonyms":[{"name":"high coordination","type":"exact"}],"termid":"PATO:0001859"}


id: PR:P78804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADP-specific glutamate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04676","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-specific glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.12c","secondary_identifiers":["UniProtKB:P78804"],"synonyms":[{"name":"NADP-GDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NADP-dependent glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gdhA","type":"exact"}],"termid":"PR:P78804"}


id: PBO:0086805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YDL206W is not an essential protein","termid":"PBO:0086805"}


id: GO:0140233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts, to regulate the postsynaptic membrane potential.","definition_xrefs":["GOC:pvn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cAMP-activated cation channel activity","termid":"GO:0005222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"intracellular cAMP-activated cation channel activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"intracellular cAMP activated cation channel activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0140233"}


id: MONDO:0019033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutis verticis gyrata (CVG) is a progressive cutaneous disorder predominantly affecting males and characterized by hypertrophy and thickening of the skin of the scalp forming convoluted furrows with deep, tender, and cerebriform cutaneous folds. Hair is usually normal in the furrows and sparse on the folds. CG can be isolated (essential CVG) or associated with other abnormalities such as intellectual deficit, epilepsy, cataract, blindness, and deafness (non essential CVG).","definition_xrefs":["Orphanet:671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"primary cutis verticis gyrata","secondary_identifiers":["ICD9:757.39","MEDGEN:78095","UMLS:C0263417","SCTID:51603000","GARD:1643","icd11.foundation:71926572"],"synonyms":[{"name":"cutis verticis gyrata","type":"exact"}],"termid":"MONDO:0019033","xrefs":{"Monarch":{"xref_id":"0019033"}}}


id: GO:2001124
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translational frameshifting.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"regulates","term_name":"translational frameshifting","termid":"GO:0006452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational frameshifting","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2001124","terms_by_termid":{"GO:2001125":null}}


id: PBO:0048528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 4","termid":"PBO:0048528"}


id: GO:0097031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex I, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex I biogenesis (obsolete GO:0097031)","termid":"GO:0097031"}


id: PBO:0044293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC finger protein 1 pseudogene 1","termid":"PBO:0044293"}


id: MONDO:0008670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Waardenburg syndrome type 1 (WS1) is a subtype of Waardenburg syndrome (WS), disorder characterized by congenital deafness, minor defects in structures arising from neural crest resulting in pigmentation anomalies of eyes, hair, and skin, in combination with dystopia canthorum.","definition_xrefs":["Orphanet:894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome","termid":"MONDO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 1","secondary_identifiers":["GARD:5519","NCIT:C75008","MEDGEN:376211","ICD10CM:E70.3","UMLS:C1847800","OMIM:193500","DOID:0110948","icd11.foundation:547536187"],"synonyms":[{"name":"WS1","type":"exact"},{"name":"Waardenburg syndrome type 1","type":"exact"},{"name":"Waardenburg syndrome type I","type":"exact"},{"name":"Waardenburg syndrome with dystopia canthorum","type":"related"},{"name":"Waardenburg syndrome, type 1","type":"related"},{"name":"Waardenburg's syndrome type 1","type":"related"}],"termid":"MONDO:0008670","xrefs":{"Monarch":{"xref_id":"0008670"}}}


id: PBO:0083227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with YCR045C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083227"}


id: SO:0001412
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA region within which self-interaction occurs more often than expected by chance because of DNA-looping.","definition_xrefs":["PMID:32782014","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_defined_region","synonyms":[{"name":"topologically defined region","type":"exact"}],"termid":"SO:0001412"}


id: GO:0065007
data:
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