# terms

id: PBO:0042893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, FRL-1, cryptic family 1B","termid":"PBO:0042893"}


id: PATO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being curled or wound (especially in concentric rings or spirals).","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coiling","termid":"PATO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled","secondary_identifiers":["PATO:0001363"],"synonyms":[{"name":"helical","type":"related"},{"name":"helicoid","type":"related"},{"name":"helicoidal","type":"related"},{"name":"helix-shaped","type":"related"},{"name":"spiral","type":"exact"}],"termid":"PATO:0000404"}


id: SO:0000523
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_C_cluster","synonyms":[{"name":"V VJ C cluster","type":"exact"},{"name":"V-(VJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000523"}


id: PBO:0046431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxide hydrolase 1","termid":"PBO:0046431"}


id: PBO:0073991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 5","termid":"PBO:0073991"}


id: GO:0051915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chemical substance activates synaptic plasticity, the ability of synapses to change as circumstances require.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic plasticity by chemical substance","termid":"GO:0051914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"induction of synaptic plasticity by chemical substance","synonyms":[{"name":"activation of synaptic plasticity by chemical substance","type":"exact"},{"name":"activation of synaptic plasticity by drug","type":"narrow"},{"name":"induction of synaptic plasticity by drug","type":"narrow"}],"termid":"GO:0051915"}


id: GO:0051570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 methylation (obsolete GO:0051570)","termid":"GO:0051570"}


id: PBO:0034105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_synology_relationship_with","termid":"PBO:0034105"}


id: GO:0099054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynapse.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:24449494","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"presynapse organization","termid":"GO:0099172"},{"relation_name":"part_of","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"presynapse assembly","synonyms":[{"name":"presynapse biogenesis","type":"exact"},{"name":"presynaptic terminal assembly","type":"exact"}],"termid":"GO:0099054"}


id: GO:0021958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the dorsal root ganglion towards target cells in the medulla. This axonal process is a member of those that make up the gracilis tract, a group of axons that are from neurons involved in proprioception from the lower trunk and lower limb.","definition_xrefs":["PMID:12867698","GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gracilis tract morphogenesis","synonyms":[{"name":"tract of Goll morphogenesis","type":"exact"}],"termid":"GO:0021958"}


id: PBO:0056026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 4","termid":"PBO:0056026"}


id: GO:1902350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chloroquine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23922869","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to chloroquine","termid":"GO:1902349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chloroquine","termid":"GO:1902350"}


id: FYPO:0007595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is increased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mitophagy","termid":"FYPO:0000501"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased mitophagy during nitrogen starvation","synonyms":[{"name":"increased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"increased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"increased autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007595"}


id: PBO:0066599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q pseudogene 2","termid":"PBO:0066599"}


id: PBO:0041710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 3","termid":"PBO:0041710"}


id: MONDO:0013671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any complete hydatidiform mole in which the cause of the disease is a mutation in the KHDC3L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"complete hydatidiform mole","termid":"MONDO:0016785"},{"relation_name":"is_a","term_name":"gestational trophoblastic neoplasm","termid":"MONDO:0018944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydatidiform mole, recurrent, 2","secondary_identifiers":["MEDGEN:481982","OMIM:614293","UMLS:C3280352","GARD:18366"],"synonyms":[{"name":"HYDM2","type":"related"},{"name":"KHDC3L complete hydatidiform mole","type":"exact"},{"name":"complete hydatidiform mole caused by mutation in KHDC3L","type":"exact"},{"name":"hydatidiform MOLE, recurrent, 2","type":"related"},{"name":"hydatidiform Mole, complete","type":"related"},{"name":"hydatidiform Mole, recurrent, type 2","type":"exact"},{"name":"hydatidiform mole, recurrent, 2","type":"exact"}],"termid":"MONDO:0013671","xrefs":{"Monarch":{"xref_id":"0013671"}}}


id: GO:0099189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the spectrin-associated cytoskeleton contained within the postsynapse.","definition_xrefs":["GOC:dos","PMID:28576936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spectrin-associated cytoskeleton","termid":"GO:0014731"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton","termid":"GO:0099571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic spectrin-associated cytoskeleton","termid":"GO:0099189"}


id: PBO:0050111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 21","termid":"PBO:0050111"}


id: PBO:0060770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B5 pseudogene 1","termid":"PBO:0060770"}


id: GO:0015492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phenylalanine(out) + H+(out) = phenylalanine(in) + H+(in).","definition_xrefs":["TC:2.A.3.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:proton symporter activity","termid":"GO:0005280"},{"relation_name":"is_a","term_name":"aromatic amino acid:proton symporter activity","termid":"GO:0015494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"phenylalanine:proton symporter activity","synonyms":[{"name":"phenylalanine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015492"}


id: MONDO:0003464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or borderline neoplasm that arises from the ovaries and the fallopian tubes. It is characterized by the presence of cystic glandular structures and fibrous tissue.","definition_xrefs":["NCIT:C8985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystadenofibroma","secondary_identifiers":["DOID:5482","MESH:D062625","NCIT:C8987"],"synonyms":[{"name":"cystadenofibroma","type":"exact"}],"termid":"MONDO:0003464","xrefs":{"Monarch":{"xref_id":"0003464"}}}


id: FYPO:0006900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased septum thickness","synonyms":[{"name":"decreased septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased septum thickness during vegetative growth","type":"exact"},{"name":"thin septum","type":"exact"}],"termid":"FYPO:0006900"}


id: GO:0031221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arabinan, a polysaccharide composed of arabinose residues.","definition_xrefs":["GOC:mlg","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"arabinan metabolic process","synonyms":[{"name":"arabinan metabolism","type":"exact"}],"termid":"GO:0031221"}


id: PBO:0054992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2406","termid":"PBO:0054992"}


id: PBO:0049013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6A","termid":"PBO:0049013"}


id: PR:O74499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04840","PANTHER:PTHR10553:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.12","secondary_identifiers":["UniProtKB:O74499"],"synonyms":[{"name":"Spom972h-LSM7","type":"exact"}],"termid":"PR:O74499"}


id: PBO:0073212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 4D","termid":"PBO:0073212"}


id: FYPO:0005052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs), as part of chromatin silencing by small RNA, is decreased.","definition_xrefs":["GO:0070919","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased production of siRNA involved in chromatin silencing by small RNA (obsolete FYPO:0005052)","synonyms":[{"name":"decreased chromatin silencing by small RNA, production of guide RNAs","type":"exact"},{"name":"decreased chromatin silencing by small RNA, production of siRNA","type":"exact"},{"name":"decreased production of guide RNAs involved in chromatin silencing by small RNA","type":"exact"},{"name":"decreased production of siRNA involved in chromatin silencing by small RNA during mitotic cell cycle","type":"related"},{"name":"decreased production of siRNA involved in chromatin silencing by small RNA during vegetative growth","type":"exact"},{"name":"reduced production of siRNA involved in chromatin silencing by small RNA","type":"exact"}],"termid":"FYPO:0005052"}


id: MONDO:0859312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with growth retardation, dysmorphic facies, and corpus callosum abnormalities","secondary_identifiers":["OMIM:620113","UMLS:C5774251","MEDGEN:1824024"],"termid":"MONDO:0859312","xrefs":{"Monarch":{"xref_id":"0859312"}}}


id: PBO:0064589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTEH antisense RNA 1","termid":"PBO:0064589"}


id: GO:2000253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of feeding behavior.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"regulation of feeding behavior","termid":"GO:0060259"},{"relation_name":"positively_regulates","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of feeding behavior","synonyms":[{"name":"positive regulation of behavioral response to food","type":"exact"},{"name":"positive regulation of behavioural response to food","type":"exact"},{"name":"positive regulation of drinking","type":"related"},{"name":"positive regulation of eating","type":"related"},{"name":"positive regulation of feeding behaviour","type":"exact"}],"termid":"GO:2000253"}


id: GO:1904384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium phosphate stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:24625659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium phosphate","termid":"GO:1904383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium phosphate","termid":"GO:1904384"}


id: GO:0032279
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of synapse occurring between an axon and a dendritic spine or dendritic shaft. Asymmetric synapses, the most abundant synapse type in the central nervous system, involve axons that contain predominantly spherical vesicles and contain a thickened postsynaptic density. Most or all synapses of this type are excitatory.","definition_xrefs":["GOC:ef","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"asymmetric synapse","synonyms":[{"name":"Gray's type I synapse","type":"exact"}],"termid":"GO:0032279"}


id: PBO:0052414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 3","termid":"PBO:0052414"}


id: PBO:0047372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO3 divergent transcript","termid":"PBO:0047372"}


id: PBO:0068356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138 pseudogene 1","termid":"PBO:0068356"}


id: FYPO:0000229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal mitotic nuclear division, such that the septum physically divides the nucleus into two parts, giving rise to inviable daughter cells.","definition_xrefs":["PomBase:mah","PomBase:vw","PomBase:jh"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"has_part","term_name":"premature septum assembly","termid":"FYPO:0003250"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"premature septum assembly","termid":"FYPO:0003250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0000032","FYPO:0000004","FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"cut","secondary_identifiers":["FYPO:0000323","FYPO:0000322"],"synonyms":[{"name":"cut during mitotic cell cycle","type":"related"},{"name":"cut during vegetative growth","type":"exact"},{"name":"mitotic catastrophe","type":"related"},{"name":"septation following abnormal nuclear division","type":"exact"}],"termid":"FYPO:0000229"}


id: PBO:0004140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mre11 complex subunit Nbs1","termid":"PBO:0004140"}


id: PBO:0046584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 26","termid":"PBO:0046584"}


id: PBO:0076395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adaptor 2B","termid":"PBO:0076395"}


id: MONDO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"impaired renal function disease","termid":"MONDO:0001343"},{"relation_name":"is_a","term_name":"secondary hyperparathyroidism","termid":"MONDO:0006964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"secondary hyperparathyroidism of renal origin","secondary_identifiers":["icd11.foundation:610229783","DOID:12465","MEDGEN:543606","ICD9:588.81","SCTID:19034001","UMLS:C0271847","ICD10CM:N25.81"],"synonyms":[{"name":"hyperparathyroidism due to renal insufficiency","type":"exact"},{"name":"secondary hyperparathyroidism (of renal origin)","type":"exact"}],"termid":"MONDO:0001530","xrefs":{"Monarch":{"xref_id":"0001530"}}}


id: PBO:0079578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 B","termid":"PBO:0079578"}


id: GO:0043014
data:
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id: FYPO:0005280
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id: MONDO:0003808
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma arising from the mediastinum.","definition_xrefs":["NCIT:C6615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraosseous osteosarcoma","termid":"MONDO:0002621"},{"relation_name":"is_a","term_name":"mediastinum sarcoma","termid":"MONDO:0002852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinal extraskeletal osteosarcoma","secondary_identifiers":["DOID:6208","UMLS:C1334675","MEDGEN:235314"],"synonyms":[{"name":"mediastinal extraskeletal osteosarcoma","type":"exact"},{"name":"mediastinal osteogenic sarcoma","type":"exact"},{"name":"mediastinal osteosarcoma","type":"exact"},{"name":"mediastinum osteosarcoma (disease)","type":"exact"},{"name":"osteogenic sarcoma of mediastinum","type":"exact"},{"name":"osteogenic sarcoma of the mediastinum","type":"exact"},{"name":"osteosarcoma of mediastinum","type":"exact"},{"name":"osteosarcoma of the mediastinum","type":"exact"}],"termid":"MONDO:0003808","xrefs":{"Monarch":{"xref_id":"0003808"}}}


id: PBO:0050118
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 28","termid":"PBO:0050118"}


id: GO:0017022
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id: PBO:0003909
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi 2","termid":"PBO:0003909"}


id: MONDO:0016499
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of Guillain-Barré syndrome characterized by acute post-ganglionic sympathetic and parasympathetic failure presenting several weeks after acute infection with gastrointestinal symptoms (abdominal pain, vomiting, constipation, diarrhea, gastroparesis, ileus), orthostatic hypotension, erectile dysfunction, urinary frequency, urgency or retention, vasomotor instability with acrocyanosis and reduced salivation, lacrimation and sweating.","definition_xrefs":["Orphanet:231457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune autonomic ganglionopathy","secondary_identifiers":["GARD:20617","MEDGEN:746161","UMLS:C2315246","SCTID:430042004"],"synonyms":[{"name":"AAG","type":"exact"},{"name":"acute panautonomic GBS","type":"exact"},{"name":"acute panautonomic Guillain-Barre syndrome","type":"exact"},{"name":"acute panautonomic Guillain-Barré syndrome","type":"exact"},{"name":"acute panautonomic neuropathy","type":"exact"},{"name":"acute pandysautonomia","type":"exact"},{"name":"autoimmune autonomic neuropathy","type":"exact"},{"name":"idiopathic subacute autonomic neuropathy","type":"exact"}],"termid":"MONDO:0016499","xrefs":{"Monarch":{"xref_id":"0016499"}}}


id: PBO:0079260
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 32","termid":"PBO:0079260"}


id: PBO:0003677
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  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CRE 5'-TGACGT-3'","termid":"PBO:0003677"}


id: PBO:0001711
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxine-pyridoxal-pyridoxamine kinase (predicted)","termid":"PBO:0001711"}


id: MONDO:0012778
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id: GO:0070886
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling via the calcineurin-NFAT signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcineurin-NFAT signaling cascade","termid":"GO:0070884"},{"relation_name":"is_a","term_name":"positive regulation of calcineurin-mediated signaling","termid":"GO:0106058"},{"relation_name":"positively_regulates","term_name":"calcineurin-NFAT signaling cascade","termid":"GO:0033173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of calcineurin-NFAT signaling cascade","secondary_identifiers":["GO:0051533"],"synonyms":[{"name":"activation of calcineurin-NFAT signaling cascade","type":"narrow"},{"name":"positive regulation of NFAT protein import into nucleus","type":"narrow"},{"name":"positive regulation of calcineurin-NFAT signaling pathway","type":"related"},{"name":"positive regulation of calcineurin-NFAT signalling cascade","type":"exact"},{"name":"stimulation of calcineurin-NFAT signaling cascade","type":"narrow"},{"name":"up regulation of calcineurin-NFAT signaling cascade","type":"exact"},{"name":"up-regulation of calcineurin-NFAT signaling cascade","type":"exact"},{"name":"upregulation of calcineurin-NFAT signaling cascade","type":"exact"}],"termid":"GO:0070886"}


id: PBO:0045799
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin 3","termid":"PBO:0045799"}


id: PBO:0082204
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; responsible for addition of the first alpha-1,2-linked mannose to form the branches on the mannan backbone of oligosaccharides, localizes to an early Golgi compartment","termid":"PBO:0082204"}


id: PBO:0001479
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane anchored protein Mac1","termid":"PBO:0001479"}


id: PBO:0087011
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease H2 subunit; required for RNase H2 activity; role in ribonucleotide excision repair; related to human AGS2 that causes Aicardi-Goutieres syndrome","termid":"PBO:0087011"}


id: PR:O94698
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 74 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein nsa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.15","secondary_identifiers":["UniProtKB:O94698"],"synonyms":[{"name":"Spom972h-WDR74","type":"exact"}],"termid":"PR:O94698"}


id: PBO:0067446
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id: GO:0060173
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id: PBO:0073047
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 5","termid":"PBO:0073047"}


id: GO:0030487
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107763],"is_not":false,"summary":null,"term":"GO:0030487"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 4,5-bisphosphate + H2O = 1D-myo-inositol 4-phosphate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisphosphate phosphatase activity","termid":"GO:0016312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol-4,5-bisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030487","terms_by_termid":{"GO:0030487":null}}


id: FYECO:0000127
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Nitrogen was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen absent","synonyms":[{"name":"-N","type":"exact"},{"name":"nitrogen excluded","type":"related"},{"name":"nitrogen free","type":"exact"},{"name":"nitrogen starvation","type":"related"}],"termid":"FYECO:0000127"}


id: PR:Q92372
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication protein A 70 kDa DNA-binding subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23273:SF0","OMA:SCHPO02369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor A protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.13c","secondary_identifiers":["UniProtKB:Q92372"],"synonyms":[{"name":"Spom972h-RPA1","type":"exact"},{"name":"single-stranded DNA-binding protein p68 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92372"}


id: GO:0052080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a MAP kinase-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host MAPK cascade","secondary_identifiers":["GO:0052277"],"synonyms":[{"name":"modulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"related"},{"name":"modulation by symbiont of host innate immune response MAPK kinase signaling","type":"narrow"},{"name":"modulation of defense-related host MAPK-mediated signal transduction pathway by organism","type":"narrow"},{"name":"modulation of defense-related host mitogen activated protein kinase-mediated signal transduction pathway by organism","type":"narrow"},{"name":"perturbation by symbiont of host MAP kinase signal transduction pathway","type":"exact"},{"name":"perturbation of host MAP signal transduction pathway","type":"exact"},{"name":"perturbation of host MAPK kinase signaling pathway","type":"exact"},{"name":"perturbation of host MAPK signal transduction pathway","type":"exact"},{"name":"perturbation of host innate immune response MAPK kinase signaling","type":"narrow"}],"termid":"GO:0052080"}


id: PBO:0030041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_iron_starvation","termid":"PBO:0030041"}


id: PBO:0067490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 624, pseudogene","termid":"PBO:0067490"}


id: MONDO:1011310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Developmental defect during embryogenesis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310","xrefs":{"Monarch":{"xref_id":"1011310"}}}


id: MONDO:0100509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy in which the cause of the disease is biallelic variants in the IFT140 gene.","definition_xrefs":["PMID:23418020","PMID:26359340","PMID:22503633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT140-related recessive ciliopathy","synonyms":[{"name":"IFT140-related recessive ciliopathy","type":"exact"},{"name":"retinitis pigmentosa 80","type":"narrow"},{"name":"short-rib thoracic dysplasia 9 with or without polydactyly","type":"narrow"}],"termid":"MONDO:0100509","xrefs":{"Monarch":{"xref_id":"0100509"}}}


id: PBO:0036279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CCDC82 ortholog","termid":"PBO:0036279"}


id: MONDO:0018340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary isolated aplastic anemia (obsolete MONDO:0018340)","secondary_identifiers":["Orphanet:397692"],"termid":"MONDO:0018340","xrefs":{"Monarch":{"xref_id":"0018340"}}}


id: GO:0098022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of capsid decoration composed of fiber structures.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid, decoration","termid":"GO:0098021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, fiber","synonyms":[{"name":"head/capsid fiber","type":"related"}],"termid":"GO:0098022"}


id: PBO:0017038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small-subunit processome, UTP-C complex subunit Utp22 (predicted)","termid":"PBO:0017038"}


id: GO:0002450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["PMID:15771591","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"},{"relation_name":"part_of","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell antigen processing and presentation","synonyms":[{"name":"B lymphocyte antigen processing and presentation","type":"exact"},{"name":"B-cell antigen processing and presentation","type":"exact"},{"name":"B-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002450"}


id: GO:0050523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which phosphorus or arsenic acts as a hydrogen or electron donor and reduces an acceptor other than disulfide, NAD or NADP.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors (obsolete GO:0050523)","synonyms":[{"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors","type":"exact"}],"termid":"GO:0050523"}


id: GO:0051007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: squalene = hop-22(29)-ene.","definition_xrefs":["EC:5.4.99.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"},{"relation_name":"is_a","term_name":"squalene cyclase activity","termid":"GO:0034072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0009975","GO:0003824"],"is_obsolete":false,"name":"squalene-hopene cyclase activity","secondary_identifiers":["RHEA:17637","MetaCyc:5.4.99.17-RXN"],"synonyms":[{"name":"squalene mutase (cyclizing)","type":"related"},{"name":"squalene:hopene cyclase activity","type":"exact"}],"termid":"GO:0051007"}


id: PBO:0059081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyl-oligosaccharide glucosidase","termid":"PBO:0059081"}


id: PR:Q10080
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.01c gene.","definition_xrefs":["UniProtKB:Q10080","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0654 protein C11D3.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.01c","synonyms":[{"name":"Spom972h-SPAC11D3.01c","type":"exact"}],"termid":"PR:Q10080"}


id: PBO:0038490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 1","termid":"PBO:0038490"}


id: FYECO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition specifying the physical texture of the growth medium.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000101 medium texture (obsolete FYECO:0000101)","termid":"FYECO:0000101"}


id: MONDO:0002979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated squamous cell carcinoma characterized by a papillary, exophytic growth pattern and hyperkeratosis. The most commonly affected anatomic sites are the larynx, penis, cervix, vagina, and vulva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"papillary carcinoma","termid":"MONDO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary squamous carcinoma","secondary_identifiers":["MEDGEN:83115","ICDO:8052/3","UMLS:C0334244","NCIT:C4102","DOID:4385"],"synonyms":[{"name":"papillary epidermoid carcinoma","type":"exact"},{"name":"papillary epidermoid cell carcinoma","type":"exact"},{"name":"papillary squamous carcinoma","type":"exact"},{"name":"papillary squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0002979","xrefs":{"Monarch":{"xref_id":"0002979"}}}


id: PBO:0005106
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degradation required to stabilize Bqt4 in the nuclear membrane","termid":"PBO:0005106"}


id: PBO:0051219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-27 (pseudogene)","termid":"PBO:0051219"}


id: MONDO:0957588
data:
  {"annotated_genes":["SJAG_02116"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85920],"is_not":false,"summary":null,"term":"MONDO:0957588"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02116":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with impaired language, behavioral abnormalities, and dysmorphic facies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882686","MEDGEN:1847194","OMIM:620494"],"termid":"MONDO:0957588","terms_by_termid":{"MONDO:0957588":null},"xrefs":{"Monarch":{"xref_id":"0957588"}}}


id: FYPO:0000956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bismuth ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on bismuth","synonyms":[{"name":"normal cell population growth in presence of bismuth","type":"exact"},{"name":"normal cell population growth on bismuth","type":"exact"},{"name":"normal cellular response to bismuth","type":"related"},{"name":"normal growth on bismuth ions","type":"exact"},{"name":"normal vegetative cell population growth on bismuth","type":"exact"}],"termid":"FYPO:0000956"}


id: PBO:0066627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive intermediate imine deaminase A homolog","termid":"PBO:0066627"}


id: FYPO:0005128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from middle meiotic genes measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth). Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:17927811","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of middle meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of middle meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of middle meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of middle meiotic gene mRNA during vegetative growth during mitotic cell cycle","type":"related"},{"name":"increased level of middle meiotic gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005128"}


id: PATO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000086 absolute sensitivity (obsolete PATO:0000086)","termid":"PATO:0000086"}


id: MONDO:1011277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive retinal atrophy in dogs due to a mutation in the BBS4 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, non-human animal","termid":"MONDO:1011977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, BBS4-related, dog","secondary_identifiers":["OMIA:002045-9615"],"synonyms":[{"name":"Bardet-Biedl syndrome 4, dog","type":"related"}],"termid":"MONDO:1011277","xrefs":{"Monarch":{"xref_id":"1011277"}}}


id: MONDO:0003525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually malignant gastrin-producing neuroendocrine tumor arising from the pancreas. It may or may not be associated with inappropriate secretion of gastrin and an associated clinical syndrome.","definition_xrefs":["NCIT:C9069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrin-producing neuroendocrine tumor","termid":"MONDO:0003523"},{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic gastrin-producing neuroendocrine tumor","secondary_identifiers":["MEDGEN:235080","UMLS:C1368066","DOID:5580","MESH:D015408"],"synonyms":[{"name":"gastrin-producing neuroendocrine tumor of pancreas","type":"exact"},{"name":"gastrin-producing neuroendocrine tumour of pancreas","type":"exact"},{"name":"islet cell tumor, ulcerogenic","type":"related"},{"name":"pancreas gastrin-producing neuroendocrine tumor","type":"exact"},{"name":"pancreas gastrin-producing neuroendocrine tumour","type":"exact"},{"name":"pancreatic G-cell tumor","type":"exact"},{"name":"pancreatic G-cell tumour","type":"exact"},{"name":"pancreatic gastrin producing NET","type":"exact"},{"name":"pancreatic gastrin producing tumor","type":"exact"},{"name":"pancreatic gastrin producing tumour","type":"exact"},{"name":"pancreatic gastrin-producing neuroendocrine tumor","type":"exact"}],"termid":"MONDO:0003525","xrefs":{"Monarch":{"xref_id":"0003525"}}}


id: GO:0072055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal cortex over time, from its formation to the mature structure. The renal cortex is the outer region of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal cortex development","termid":"GO:0072055"}


id: GO:0047711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: blasticidin S + H2O = deaminohydroxyblasticidin S + NH3.","definition_xrefs":["MetaCyc:BLASTICIDIN-S-DEAMINASE-RXN","EC:3.5.4.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"blasticidin-S deaminase activity","secondary_identifiers":["RHEA:10148"],"synonyms":[{"name":"blasticidin-S aminohydrolase activity","type":"related"}],"termid":"GO:0047711"}


id: PBO:0044010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1","termid":"PBO:0044010"}


id: PBO:0059257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L22 pseudogene 1","termid":"PBO:0059257"}


id: GO:0003266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardioblast proliferation in the second heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. The secondary heart field is the region of the heart that will form the majority of the mesodermal component of the right ventricle, the arterial pole (outflow tract) and the venous pole (inflow tract).","definition_xrefs":["PMID:17276708","GOC:rl","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast proliferation","termid":"GO:0003264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"regulation of SHF cardioblast proliferation","type":"exact"},{"name":"regulation of second heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003266"}


id: GO:1900158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bone mineralization involved in bone maturation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of bone mineralization","termid":"GO:0030502"},{"relation_name":"is_a","term_name":"regulation of bone mineralization involved in bone maturation","termid":"GO:1900157"},{"relation_name":"negatively_regulates","term_name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone mineralization involved in bone maturation","synonyms":[{"name":"down regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"down-regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"downregulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"inhibition of bone mineralization involved in bone maturation","type":"narrow"}],"termid":"GO:1900158"}


id: GO:1905585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of outer hair cell apoptotic process.","definition_xrefs":["GO_REF:0000058","PMID:24472721","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"regulates","term_name":"outer hair cell apoptotic process","termid":"GO:1905584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of outer hair cell apoptotic process","synonyms":[{"name":"regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"regulation of outer hair cell apoptosis","type":"narrow"}],"termid":"GO:1905585"}


id: GO:0033486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of delphinidin 3-O-glucoside, a basic, water-soluble anthocyanin responsible for blue coloration of flowers and fruits.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"delphinidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"delphinidin 3-O-glucoside anabolism","type":"exact"},{"name":"delphinidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"delphinidin 3-O-glucoside formation","type":"exact"},{"name":"delphinidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033486"}


id: PBO:0089556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA 2'-O-methyltransferase fibrillarin-like","termid":"PBO:0089556"}


id: MONDO:0032615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 9","secondary_identifiers":["UMLS:C4748767","OMIM:618232","GARD:16319","MEDGEN:1648447","DOID:0112073"],"synonyms":[{"name":"MC1DN9","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 9","type":"related"}],"termid":"MONDO:0032615","xrefs":{"Monarch":{"xref_id":"0032615"}}}


id: PBO:0056131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme","termid":"PBO:0056131"}


id: PBO:0030447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphatase_activity","termid":"PBO:0030447"}


id: MONDO:0006426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system embryonal tumor, not otherwise specified arising from the spinal cord.","definition_xrefs":["NCIT:C5406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0000640"},{"relation_name":"is_a","term_name":"spinal cord cancer","termid":"MONDO:0003544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spinal cord primitive neuroectodermal tumor","secondary_identifiers":["DOID:6872","EFO:1000545","MEDGEN:234805","UMLS:C1336048"],"synonyms":[{"name":"primitive neuroectodermal neoplasm of spinal cord","type":"exact"},{"name":"primitive neuroectodermal neoplasm of the spinal cord","type":"exact"},{"name":"primitive neuroectodermal tumor of spinal cord","type":"exact"},{"name":"primitive neuroectodermal tumor of the spinal cord","type":"exact"},{"name":"primitive neuroectodermal tumour of spinal cord","type":"exact"},{"name":"primitive neuroectodermal tumour of the spinal cord","type":"exact"},{"name":"spinal cord PNET","type":"exact"},{"name":"spinal cord primitive neuroectodermal neoplasm","type":"exact"},{"name":"spinal cord primitive neuroectodermal tumor","type":"exact"}],"termid":"MONDO:0006426","xrefs":{"Monarch":{"xref_id":"0006426"}}}


id: PBO:0056923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis regulator for oocyte development","termid":"PBO:0056923"}


id: PBO:0040584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BABAM2 antisense RNA 1","termid":"PBO:0040584"}


id: MONDO:0024299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rickets","termid":"MONDO:0005520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D-dependent rickets","secondary_identifiers":["MEDGEN:526251","DOID:0080883","NANDO:1200781","NANDO:2200401","NANDO:2100144","SCTID:68295002","UMLS:C0221468"],"synonyms":[{"name":"VDDR","type":"exact"}],"termid":"MONDO:0024299","xrefs":{"Monarch":{"xref_id":"0024299"}}}


id: GO:0042719
data:
  {"annotated_genes":["SJAG_01949","SJAG_02524","SJAG_04208","SJAG_00687"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88172,89902,92291,115712],"is_not":false,"summary":null,"term":"GO:0042719"}]},"cv_name":"cellular_component","definition":"Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane.","definition_xrefs":["PMID:12581629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"},{"relation_name":"part_of","term_name":"mitochondrial intermembrane space","termid":"GO:0005758"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00687":null,"SJAG_01949":null,"SJAG_02524":null,"SJAG_04208":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial intermembrane space protein transporter complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Tim9-Tim10 complex","type":"narrow"}],"termid":"GO:0042719","terms_by_termid":{"GO:0042719":null}}


id: PBO:0091560
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Morphology and Distribution","termid":"PBO:0091560"}


id: PBO:0048913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member H","termid":"PBO:0048913"}


id: GO:0016269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 3 O-glycan structure, GlcNAc-beta-(1->3)-GalNAc.","definition_xrefs":["GOC:mah","GOC:pr","PMID:10580130","PMID:33775405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"core 3 O-glycan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-7435"],"synonyms":[{"name":"O-glycan processing, core 3","type":"exact"},{"name":"core 3 O-glycan biosynthesis","type":"exact"}],"termid":"GO:0016269"}


id: PBO:0079574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C","termid":"PBO:0079574"}


id: MONDO:0009759
data:
  {"annotated_genes":["SJAG_04699","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86309,86310],"is_not":false,"summary":null,"term":"MONDO:0009759"}]},"cv_name":"mondo","definition":"Any mosaic variegated aneuploidy syndrome in which the cause of the disease is a mutation in the BUB1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_04699":null},"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080141","MEDGEN:338026","OMIM:257300","UMLS:C1850343"],"synonyms":[{"name":"BUB1B mosaic variegated aneuploidy syndrome","type":"exact"},{"name":"MOSAIC variegated aneuploidy syndrome 1","type":"related"},{"name":"MVA syndrome","type":"related"},{"name":"MVA1","type":"related"},{"name":"Mosaic variegated aneuploidy syndrome type 1","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome 1","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome caused by mutation in BUB1B","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome type 1","type":"exact"}],"termid":"MONDO:0009759","terms_by_termid":{"MONDO:0009759":null},"xrefs":{"Monarch":{"xref_id":"0009759"}}}


id: PBO:0077205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 4 L six family member 20","termid":"PBO:0077205"}


id: GO:0050563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + trans-ferulate = (E)-feruloyl-CoA + ADP + phosphate. ADP + phosphate or AMP + diphosphate may be formed in this reaction.","definition_xrefs":["EC:6.2.1.34","PMID:22649270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trans-feruloyl-CoA synthase activity","secondary_identifiers":["GO:0106287","MetaCyc:6.2.1.34-RXN"],"synonyms":[{"name":"ferulate-CoA ligase activity","type":"related"},{"name":"trans-ferulate:CoASH ligase (ATP-hydrolysing)","type":"related"},{"name":"trans-feruloyl-CoA synthetase activity","type":"related"}],"termid":"GO:0050563"}


id: GO:0033225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of 2-aminoethylphosphonate from one side of a membrane to the other by catalysis of the reaction: ATP + H2O + 2-aminoethylphosphonate(out) = ADP + phosphate + 2-aminoethylphosphonate(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled 2-aminoethylphosphonate transporter activity","secondary_identifiers":["GO:0033224","RHEA:32775"],"synonyms":[{"name":"2-aminoethylphosphonate transmembrane transporter activity","type":"related"},{"name":"2-aminoethylphosphonate transporting ATPase activity","type":"related"},{"name":"2-aminoethylphosphonate-transporting ATPase activity","type":"exact"},{"name":"2-phosphonoethylamine transmembrane transporter activity","type":"related"},{"name":"2-phosphonoethylamine transporting ATPase activity","type":"exact"},{"name":"ATP-dependent 2-aminoethylphosphonate transporter activity","type":"exact"},{"name":"ciliatine transporter activity","type":"related"},{"name":"ciliatine transportingATPase activity","type":"exact"}],"termid":"GO:0033225"}


id: PBO:0086983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of trehalose-6-phosphate synthase/phosphatase; involved in synthesis of storage carbohydrate trehalose; expression is induced by stress conditions and repressed by the Ras-cAMP pathway; TPS3 has a paralog, TSL1, that arose from the whole genome duplication","termid":"PBO:0086983"}


id: PBO:0046076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 1","termid":"PBO:0046076"}


id: PBO:0071972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase like 1","termid":"PBO:0071972"}


id: PBO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad54 homolog Rhp54","termid":"PBO:0002173"}


id: GO:0035424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in innate immune response (obsolete GO:0035424)","synonyms":[{"name":"nuclear translocation of MAPK involved in innate immune response","type":"narrow"}],"termid":"GO:0035424"}


id: PBO:0078504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tribbles pseudokinase 1","termid":"PBO:0078504"}


id: PBO:0061821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 11 Y-linked","termid":"PBO:0061821"}


id: GO:0008163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete DDT resistance (obsolete GO:0008163)","synonyms":[{"name":"DDT resistance","type":"exact"}],"termid":"GO:0008163"}


id: PBO:0077867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 8","termid":"PBO:0077867"}


id: MONDO:0005490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stroke caused by the blockage of blood flow in one of the large arteries feeding the brain.","definition_xrefs":["EFO:0005524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"stroke disorder","termid":"MONDO:0005098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large artery stroke","termid":"MONDO:0005490","xrefs":{"Monarch":{"xref_id":"0005490"}}}


id: PBO:0079307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 3B","termid":"PBO:0079307"}


id: GO:0032967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of collagen metabolic process","termid":"GO:0010714"},{"relation_name":"is_a","term_name":"regulation of collagen biosynthetic process","termid":"GO:0032965"},{"relation_name":"positively_regulates","term_name":"collagen biosynthetic process","termid":"GO:0032964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collagen biosynthetic process","synonyms":[{"name":"positive regulation of collagen anabolism","type":"exact"},{"name":"positive regulation of collagen biosynthesis","type":"exact"},{"name":"positive regulation of collagen formation","type":"exact"},{"name":"positive regulation of collagen synthesis","type":"exact"}],"termid":"GO:0032967"}


id: PBO:0035941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_cytoplasmic_microtubules_during_mitotic_interphase","termid":"PBO:0035941"}


id: FYPO:0005947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing potassium chloride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on potassium chloride","synonyms":[{"name":"normal cell population growth in presence of potassium chloride","type":"exact"},{"name":"normal cell population growth on KCl","type":"exact"},{"name":"normal cell population growth on potassium chloride","type":"exact"},{"name":"normal cellular response to potassium chloride","type":"related"},{"name":"normal vegetative cell population growth on potassium chloride","type":"exact"}],"termid":"FYPO:0005947"}


id: GO:0000482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 5S ribosomal RNA (rRNA) molecule into a mature 5S rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5S rRNA","termid":"GO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0042254","GO:0010467"],"is_obsolete":false,"name":"maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000482"}


id: MOD:01469
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-selenocysteinyl tungsten bis(molybdopterin guanine dinucleotide) (not known as a natural, post-translational modification process).","definition_xrefs":["RESID:AA0376#CYS","PubMed:11372198","PubMed:12220497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tungsten containing modified residue","termid":"MOD:00746"},{"relation_name":"is_a","term_name":"pterin modified residue","termid":"MOD:00748"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-selenocysteine residue","termid":"MOD:02073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocysteinyl tungsten bis(molybdopterin guanine dinucleotide) (Cys)","termid":"MOD:01469"}


id: PBO:0063926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 5","termid":"PBO:0063926"}


id: PATO:0001285
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow","termid":"PATO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated yellow","synonyms":[{"name":"bright yellow","type":"related"}],"termid":"PATO:0001285"}


id: GO:0031779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a melanocortin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"melanocortin receptor binding","synonyms":[{"name":"melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0031779"}


id: PATO:0000718
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a population by virtue of the bearer's long term survival inability.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal (sensu genetics)","termid":"PATO:0000718"}


id: MONDO:0021083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital fibrosis of extraocular muscles in which the cause of the disease is a mutation in the KIF21A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital fibrosis of extraocular muscles type 1","secondary_identifiers":["DOID:0081015","MEDGEN:376943","UMLS:C1851102","OMIM:135700"],"synonyms":[{"name":"CFEOM1","type":"exact"},{"name":"Feom1 locus","type":"related"},{"name":"KIF21A congenital fibrosis of extraocular muscles","type":"exact"},{"name":"blepharoptosis with absent eye movements","type":"related"},{"name":"congenital fibrosis of extraocular muscles caused by mutation in KIF21A","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 1","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 3B","type":"related"},{"name":"ophthalmoplegia, congenital","type":"related"}],"termid":"MONDO:0021083","xrefs":{"Monarch":{"xref_id":"0021083"}}}


id: PBO:0047475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 2","termid":"PBO:0047475"}


id: GO:0048392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an intermediate mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"intermediate mesoderm formation","termid":"GO:0048391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell differentiation","synonyms":[{"name":"intermediate mesoderm cell differentiation","type":"exact"}],"termid":"GO:0048392"}


id: GO:0035729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hepatocyte growth factor","termid":"GO:0035728"},{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hepatocyte growth factor stimulus","synonyms":[{"name":"cellular response to HGF stimulus","type":"exact"}],"termid":"GO:0035729"}


id: SO:0001880
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where the structural change, an amplification of sequence, is greater than the extent of the underlying genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_amplification","synonyms":[{"name":"feature amplification","type":"exact"}],"termid":"SO:0001880"}


id: FYPO:0003641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of adenylate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal adenylate kinase activity","termid":"FYPO:0003640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000002","FYPO:0005447","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased adenylate kinase activity","termid":"FYPO:0003641"}


id: GO:0034691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaE subunit and one beta7 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"integrin alphaE-beta7 complex","synonyms":[{"name":"Itgae-Itgb7 complex","type":"narrow"}],"termid":"GO:0034691"}


id: GO:0004349
data:
  {"annotated_genes":["SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90397],"is_not":false,"summary":null,"term":"GO:0004349"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + ATP = L-glutamyl 5-phosphate + ADP + H+.","definition_xrefs":["EC:2.7.2.11","RHEA:14877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"},{"relation_name":"is_a","term_name":"amino acid kinase activity","termid":"GO:0019202"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glutamate 5-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUTKIN-RXN","KEGG_REACTION:R00239"],"synonyms":[{"name":"ATP-L-glutamate 5-phosphotransferase activity","type":"related"},{"name":"ATP:L-glutamate 5-phosphotransferase activity","type":"related"},{"name":"ATP:gamma-L-glutamate phosphotransferase activity","type":"related"},{"name":"gamma-glutamate kinase activity","type":"related"},{"name":"gamma-glutamyl kinase activity","type":"related"},{"name":"glutamate kinase activity","type":"related"}],"termid":"GO:0004349","terms_by_termid":{"GO:0004349":null}}


id: PBO:0011063
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in fungi only","termid":"PBO:0011063"}


id: GO:0021967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed from its cell body in layer V through the cerebral cortex in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:9878731","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the cerebral cortex","synonyms":[{"name":"corticospinal neuron axon pathfinding through the cerebral cortex","type":"narrow"}],"termid":"GO:0021967"}


id: PBO:0047435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 6","termid":"PBO:0047435"}


id: PATO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being in the plane of the horizon.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horizontal","termid":"PATO:0001855"}


id: MONDO:0015478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paramedian facial cleft (obsolete MONDO:0015478)","secondary_identifiers":["Orphanet:155867"],"synonyms":[{"name":"Tessier number 1-1 and 2-12 facial cleft","type":"exact"}],"termid":"MONDO:0015478","xrefs":{"Monarch":{"xref_id":"0015478"}}}


id: GO:0072481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether the spindle is correctly oriented is received and converted into a molecular signal, contributing to a mitotic cell cycle spindle orientation checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic spindle orientation checkpoint (obsolete GO:0072481)","synonyms":[{"name":"detection of stimulus involved in mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"mitotic cell cycle spindle orientation checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle spindle orientation checkpoint sensor process","type":"related"},{"name":"sensing involved in mitotic cell cycle spindle orientation checkpoint","type":"related"}],"termid":"GO:0072481"}


id: PBO:0012575
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S phase delayed","termid":"PBO:0012575"}


id: GO:0052448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of ethylene in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of ethylene levels in symbiont (obsolete GO:0052448)","synonyms":[{"name":"modulation by organism of ethylene levels in symbiont","type":"exact"}],"termid":"GO:0052448"}


id: MONDO:0008611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Humerus trochlea aplasia is an extremely rare familial bone deformity described only in Japanese patients to date. The deformity is bilateral in nearly half of patients (with bilateral involvement, the condition is symmetrical) and sometimes causes ulnar nerve palsy or cubitus varus.","definition_xrefs":["Orphanet:3383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humerus trochlea aplasia","secondary_identifiers":["MESH:C566022","GARD:2750","OMIM:191000","UMLS:C1860773","SCTID:732928005","MEDGEN:348185"],"synonyms":[{"name":"aplasia of trochlea of the humerus","type":"related"},{"name":"trochlea of the HUMERUS, aplasia OF","type":"related"},{"name":"trochlea of the humerus aplasia of","type":"related"}],"termid":"MONDO:0008611","xrefs":{"Monarch":{"xref_id":"0008611"}}}


id: GO:0034667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha3 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"integrin alpha3-beta1 complex","synonyms":[{"name":"ITGA3-ITGB1 complex","type":"narrow"},{"name":"VLA-3 complex","type":"exact"},{"name":"alpha3-beta1 integrin complex","type":"exact"}],"termid":"GO:0034667"}


id: PBO:0074254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1B7 (putative)","termid":"PBO:0074254"}


id: MONDO:0004923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic inflammation of lacrimal passage","secondary_identifiers":["ICD9:375.4","DOID:9935","SCTID:267653001","UMLS:C0155239","MEDGEN:509865"],"termid":"MONDO:0004923","xrefs":{"Monarch":{"xref_id":"0004923"}}}


id: PBO:0039070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC catalytic component 2","termid":"PBO:0039070"}


id: MONDO:0003968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bone osteosarcoma affecting multiple skeletal sites, with multifocal lesions discovered between 6 and 24 months after the appearance of the initial tumor. Patients with asynchronous tumors have a better prognosis than those with synchronous osteosarcomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multifocal osteogenic sarcoma","termid":"MONDO:0002622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"asynchronous multifocal osteogenic sarcoma","secondary_identifiers":["DOID:6697","MEDGEN:231083","NCIT:C6472","UMLS:C1332342"],"synonyms":[{"name":"asynchronous multifocal osteosarcoma","type":"exact"}],"termid":"MONDO:0003968","xrefs":{"Monarch":{"xref_id":"0003968"}}}


id: MONDO:0010517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the PIH1D3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 36, X-linked","secondary_identifiers":["DOID:0111850","MEDGEN:1393107","GARD:15280","UMLS:C4478372","OMIM:300991"],"synonyms":[{"name":"CILD36","type":"exact"},{"name":"PIH1D3 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 36, X-linked","type":"exact"},{"name":"ciliary dyskinesia, primary, 36, X-linked, X-linked recessive","type":"exact"},{"name":"ciliary dyskinesia, primary, 36, X-linked; CILD36","type":"exact"},{"name":"ciliary dyskinesia, primary, 36, with or without situs inversus","type":"related"},{"name":"primary ciliary dyskinesia caused by mutation in PIH1D3","type":"exact"}],"termid":"MONDO:0010517","xrefs":{"Monarch":{"xref_id":"0010517"}}}


id: FYPO:0003126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain a detectable post-anaphase array of microtubules.","definition_xrefs":["PMID:9601091","PMID:24006493","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal post-anaphase array","termid":"FYPO:0004316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002399","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"post-anaphase array absent from cell","synonyms":[{"name":"PAA absent from cell","type":"exact"},{"name":"absent post-anaphase array","type":"exact"},{"name":"post-anaphase array absent from cell during mitotic cell cycle","type":"related"},{"name":"post-anaphase array absent from cell during vegetative growth","type":"exact"},{"name":"post-anaphase microtubule array absent from cell","type":"exact"}],"termid":"FYPO:0003126"}


id: GO:0099699
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of synaptic membrane (obsolete GO:0099699)","termid":"GO:0099699"}


id: PR:O13718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vtc2 gene.","definition_xrefs":["UniProtKB:O13718","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.11","synonyms":[{"name":"Spom972h-vtc2","type":"exact"}],"termid":"PR:O13718"}


id: MONDO:0012423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MORM syndrome is characterized by the association of intellectual deficit, truncal obesity, retinal dystrophy and micropenis. It has been described in 14 individuals from a consanguineous family. It is transmitted in an autosomal recessive manner. The causative locus has been mapped to chromosome region 9q34.","definition_xrefs":["Orphanet:75858"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORM syndrome","secondary_identifiers":["GARD:10121","MEDGEN:341851","OMIM:610156","MESH:C536984","UMLS:C1857802","SCTID:715628009","icd11.foundation:1027545274"],"synonyms":[{"name":"MORM syndrome","type":"exact"},{"name":"MORMS","type":"related"},{"name":"intellectual disability, truncal obesity, retinal dystrophy and micropenis","type":"related"},{"name":"intellectual disability, truncal obesity, retinal dystrophy, and micropenis syndrome","type":"related"},{"name":"intellectual disability-truncal obesity-retinal dystrophy-micropenis syndrome","type":"exact"},{"name":"mental retardation, truncal obesity, retinal dystrophy and micropenis","type":"related"},{"name":"mental retardation, truncal obesity, retinal dystrophy, and micropenis","type":"exact"},{"name":"mental retardation, truncal obesity, retinal dystrophy, and micropenis syndrome","type":"related"},{"name":"mental retardation-truncal obesity-retinal dystrophy-micropenis syndrome","type":"exact"}],"termid":"MONDO:0012423","xrefs":{"Monarch":{"xref_id":"0012423"}}}


id: MONDO:1012356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"growth-hormone-receptor deficiency dwarfism, non-human animal","termid":"MONDO:1011956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth-hormone-receptor deficiency dwarfism, cattle","secondary_identifiers":["OMIA:001294-9913"],"termid":"MONDO:1012356","xrefs":{"Monarch":{"xref_id":"1012356"}}}


id: MONDO:0007908
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86214],"is_not":false,"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"Multiple symmetric lipomatosis (MSL) is a rare subcutaneous tissue disease characterized by growth of symmetric non-encapsulated masses of adipose tissue mostly around the face and neck with variable clinical repercussions (e.g. reduced neck mobility, compression of respiratory structures).","definition_xrefs":["Orphanet:2398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"lipomatosis","termid":"MONDO:0006574"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"multiple symmetric lipomatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C4392","GARD:6957","OMIM:151800","DOID:14116","EFO:1000737","NORD:1392","MEDGEN:7349","UMLS:C0023804","SCTID:238902007"],"synonyms":[{"name":"Launois-Bensaude lipomatosis","type":"exact"},{"name":"Launois-Bensaude syndrome","type":"related"},{"name":"Launois-Bensaude's lipomatosis","type":"exact"},{"name":"MSL","type":"related"},{"name":"Madelung disease","type":"broad"},{"name":"Madelung's Disease","type":"exact"},{"name":"Madelung's disease","type":"related"},{"name":"Madelung's neck","type":"exact"},{"name":"benign symmetrical lipomatosis","type":"related"},{"name":"cephalothoracic lipodystrophy","type":"exact"},{"name":"cervical symmetrical lipomatosis","type":"exact"},{"name":"familial benign cervical lipomatosis","type":"exact"},{"name":"familial symmetric lipomatosis","type":"related"},{"name":"lipodystrophy, cephalothoracic","type":"exact"},{"name":"lipomatosis, familial benign cervical","type":"exact"},{"name":"lipomatosis, multiple symmetric","type":"related"},{"name":"multiple symmetric lipomatosis","type":"exact"},{"name":"multiple symmetrical lipomatosis","type":"exact"}],"termid":"MONDO:0007908","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0007908"}}}


id: MONDO:0002587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thymoma that is confined within the capsule and may display benign or malignant morphologic characteristics.","definition_xrefs":["NCIT:C7386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymoma","termid":"MONDO:0006456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"encapsulated thymoma","secondary_identifiers":["MEDGEN:232452","UMLS:C1333383","DOID:3278"],"synonyms":[{"name":"encapsulated thymoma","type":"exact"}],"termid":"MONDO:0002587","xrefs":{"Monarch":{"xref_id":"0002587"}}}


id: GO:1904798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of core promoter binding.","definition_xrefs":["GOC:nc","GOC:TermGenie","GOC:BHF_telomere","PMID:22723415","GO_REF:0000059","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription regulatory region DNA binding","termid":"GO:2000679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of core promoter binding","synonyms":[{"name":"activation of core promoter binding","type":"narrow"},{"name":"up regulation of core promoter binding","type":"exact"},{"name":"up-regulation of core promoter binding","type":"exact"},{"name":"upregulation of core promoter binding","type":"exact"}],"termid":"GO:1904798"}


id: FYPO:0000964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing thiabendazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on thiabendazole","synonyms":[{"name":"normal cell population growth in presence of thiabendazole","type":"exact"},{"name":"normal cell population growth on TBZ","type":"exact"},{"name":"normal cell population growth on thiabendazole","type":"exact"},{"name":"normal cellular response to thiabendazole","type":"related"},{"name":"normal vegetative cell population growth on thiabendazole","type":"exact"}],"termid":"FYPO:0000964"}


id: PBO:0045293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 45","termid":"PBO:0045293"}


id: MONDO:0032931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pontocerebellar hypoplasia, hypotonia, and respiratory insufficiency syndrome, neonatal lethal","secondary_identifiers":["DOID:0081396","MEDGEN:1716458","GARD:18034","OMIM:618810","UMLS:C5394137","Orphanet:615954"],"synonyms":[{"name":"Chromosome 1P36.33 Deletion Syndrome, Atad3 Gene Cluster, Autosomal Recessive","type":"related"},{"name":"PHRINL","type":"related"},{"name":"PONTOCEREBELLAR HYPOPLASIA, HYPOTONIA, AND RESPIRATORY INSUFFICIENCY SYNDROME, NEONATAL LETHAL","type":"related"},{"name":"Phrinl Syndrome","type":"related"},{"name":"fatal pontocerebellar hypoplasia-hypotonia-respiratory distress syndrome","type":"exact"},{"name":"fatal pontocerebellar hypoplasia-hypotonia-respiratory insufficiency syndrome","type":"exact"}],"termid":"MONDO:0032931","xrefs":{"Monarch":{"xref_id":"0032931"}}}


id: FYPO:0009113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle polar microtubules during anaphase B does not occur.","definition_xrefs":["PMID:34080538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle during mitosis","termid":"FYPO:0004754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle polar microtubules during anaphase B","synonyms":[{"name":"abolished protein localisation to interpolar microtubules during mitotic anaphase B","type":"exact"},{"name":"abolished protein localisation to mitotic spindle polar microtubules during anaphase B","type":"exact"},{"name":"abolished protein localization to interpolar microtubules during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0009113"}


id: GO:0045923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of fatty acid metabolic process","synonyms":[{"name":"activation of fatty acid metabolic process","type":"narrow"},{"name":"positive regulation of fatty acid metabolism","type":"exact"},{"name":"stimulation of fatty acid metabolic process","type":"narrow"},{"name":"up regulation of fatty acid metabolic process","type":"exact"},{"name":"up-regulation of fatty acid metabolic process","type":"exact"},{"name":"upregulation of fatty acid metabolic process","type":"exact"}],"termid":"GO:0045923"}


id: GO:0016729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces an acceptor other than disulfide, NAD, NADP or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on CH2 groups, other acceptors (obsolete GO:0016729)","synonyms":[{"name":"oxidoreductase activity, acting on CH2 groups, other acceptors","type":"exact"}],"termid":"GO:0016729"}


id: GO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete inward rectifier channel (obsolete GO:0005241)","synonyms":[{"name":"inward rectifier channel","type":"exact"}],"termid":"GO:0005241"}


id: GO:0102969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-oxogeraniol + NADP = (6E)-8-oxogeranial + NADPH + H+.","definition_xrefs":["GOC:pz","RHEA:32615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"10-oxogeraniol oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9370"],"termid":"GO:0102969"}


id: GO:1905126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axo-dendritic protein transport.","definition_xrefs":["GOC:TermGenie","PMID:20694152","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"axo-dendritic protein transport","termid":"GO:0099640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of axo-dendritic protein transport","synonyms":[{"name":"regulation of axonal protein transport","type":"narrow"}],"termid":"GO:1905126"}


id: FYPO:0006202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydroxyurea is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to hydroxyurea","synonyms":[{"name":"normal RNA accumulation during cellular response to hydroxyurea","type":"related"},{"name":"normal RNA level during cellular response to HU","type":"exact"},{"name":"normal RNA level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to hydroxyurea","type":"narrow"},{"name":"normal transcript level during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006202"}


id: MONDO:0013979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the LRRC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 19","secondary_identifiers":["UMLS:C3543826","DOID:0110608","GARD:15883","MEDGEN:762332","OMIM:614935"],"synonyms":[{"name":"CILD19","type":"exact"},{"name":"LRRC6 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 19","type":"related"},{"name":"ciliary dyskinesia, primary, 19, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 19","type":"exact"},{"name":"primary ciliary dyskinesia 19","type":"exact"},{"name":"primary ciliary dyskinesia 19 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in LRRC6","type":"exact"},{"name":"primary ciliary dyskinesia type 19","type":"exact"}],"termid":"MONDO:0013979","xrefs":{"Monarch":{"xref_id":"0013979"}}}


id: PBO:0069623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 900, pseudogene","termid":"PBO:0069623"}


id: PBO:0047520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEZ family zinc finger 2","termid":"PBO:0047520"}


id: PBO:0070424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 2","termid":"PBO:0070424"}


id: PBO:0063165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 9","termid":"PBO:0063165"}


id: PBO:0003056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-dependent formaldehyde dehydrogenase (predicted)","termid":"PBO:0003056"}


id: PBO:0090369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi coiled-coil protein Tmf1","termid":"PBO:0090369"}


id: PBO:0067410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 520, pseudogene","termid":"PBO:0067410"}


id: PBO:0074130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 31 member 2","termid":"PBO:0074130"}


id: PBO:0001787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase phosphoprotein 6 family protein","termid":"PBO:0001787"}


id: PBO:0082001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 2","termid":"PBO:0082001"}


id: GO:0032943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mononuclear cell population by cell division. A mononuclear cell is a leukocyte with a single non-segmented nucleus in the mature form.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mononuclear cell proliferation","synonyms":[{"name":"PBMC proliferation","type":"narrow"},{"name":"peripheral blood mononuclear cell proliferation","type":"narrow"}],"termid":"GO:0032943"}


id: MONDO:1012150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, cattle","secondary_identifiers":["OMIA:000621-9913"],"termid":"MONDO:1012150","xrefs":{"Monarch":{"xref_id":"1012150"}}}


id: PBO:0079235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC9 divergent transcript","termid":"PBO:0079235"}


id: PBO:0018231
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli ispA","termid":"PBO:0018231"}


id: GO:0051590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter transport","termid":"GO:0051588"},{"relation_name":"positively_regulates","term_name":"neurotransmitter transport","termid":"GO:0006836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurotransmitter transport","synonyms":[{"name":"activation of neurotransmitter transport","type":"narrow"},{"name":"stimulation of neurotransmitter transport","type":"narrow"},{"name":"up regulation of neurotransmitter transport","type":"exact"},{"name":"up-regulation of neurotransmitter transport","type":"exact"},{"name":"upregulation of neurotransmitter transport","type":"exact"}],"termid":"GO:0051590"}


id: MONDO:0016818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mikati-Najjar-Sahli syndrome is characterized by microcephaly, hypergonadotropic hypogonadism, short stature and facial dysmorphism (a narrow forehead, hypertrophy and fusion of the eyebrows, micrognathia and pinnae abnormalities).","definition_xrefs":["Orphanet:2558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mikati-Najjar-Sahli syndrome","secondary_identifiers":["MEDGEN:1376092","GARD:3617","UMLS:C4518578"],"synonyms":[{"name":"microcephaly-hypergonadotropic hypogonadism-short stature syndrome","type":"exact"}],"termid":"MONDO:0016818","xrefs":{"Monarch":{"xref_id":"0016818"}}}


id: GO:0010333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"terpene synthase activity","termid":"GO:0010333"}


id: GO:0005698
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The region of a eukaryotic chromosome that is attached to the spindle during nuclear division. It is defined genetically as the region of the chromosome that always segregates at the first division of meiosis; the region of the chromosome in which no crossing over occurs. At the start of M phase, each chromosome consists of two sister chromatids with a constriction at a point which forms the centromere. During late prophase two kinetochores assemble on each centromere, one kinetochore on each sister chromatid.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete centromere (obsolete GO:0005698)","synonyms":[{"name":"centromere","type":"exact"}],"termid":"GO:0005698"}


id: PBO:0063798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline, histidine and glycine rich 1","termid":"PBO:0063798"}


id: GO:0033806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine + fluoroacetaldehyde = acetaldehyde + 4-fluoro-L-threonine.","definition_xrefs":["RHEA:11748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016744","GO:0003674"],"is_obsolete":false,"name":"fluorothreonine transaldolase activity","secondary_identifiers":["EC:2.2.1.8"],"synonyms":[{"name":"fluoroacetaldehyde:L-threonine aldehydetransferase activity","type":"related"}],"termid":"GO:0033806"}


id: MONDO:0043133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"visual epilepsy","termid":"MONDO:0001386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"microcephaly micropenis convulsions","secondary_identifiers":["GARD:3628","MEDGEN:444076","MESH:C537540","UMLS:C2931525"],"synonyms":[{"name":"microcephaly micropenis convulsions","type":"exact"},{"name":"microcephaly micropenis seizures","type":"related"},{"name":"microcephaly seizures genital hypoplasia","type":"related"}],"termid":"MONDO:0043133","xrefs":{"Monarch":{"xref_id":"0043133"}}}


id: PBO:0113043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin-associated high mobility group (HMG) family member; role in compacting, bending, bridging and looping DNA; lysine-rich CTD is essential for chromatin assembly, forming condensates with dsDNA; functionally similar to linker histone H1; rDNA-binding component regulates transcription from RNAPI promoters; regulates start site selection of ribosomal protein genes via RNAPII promoters; role in genome maintenance; associates with a 5'-3' DNA helicase and Fpr1p","termid":"PBO:0113043"}


id: PBO:0067397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 503, pseudogene","termid":"PBO:0067397"}


id: MONDO:0020295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aberrant drainage of one or more of the pulmonary veins which causes the return of oxygen-rich blood to the right atrium.","definition_xrefs":["NCIT:C110942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital pulmonary veins anomaly","secondary_identifiers":["SCTID:111322000","GARD:19559","Orphanet:98729"],"synonyms":[{"name":"congenital anomaly of pulmonary veins","type":"exact"},{"name":"pulmonary vein abnormality","type":"related"}],"termid":"MONDO:0020295","xrefs":{"Monarch":{"xref_id":"0020295"}}}


id: PBO:0088320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DDHD family phospholipase","termid":"PBO:0088320"}


id: FYPO:0004617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which minus-end specific microtubule depolymerization, i.e. the removal of tubulin dimers from the minus end of a microtubule, occurs at a greater rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0036078"],"gene_count":0,"genotype_count":0,"name":"obsolete increased rate of microtubule depolymerization at minus end (obsolete FYPO:0004617)","synonyms":[{"name":"decreased microtubule stability","type":"related"},{"name":"increased microtubule depolymerization rate at minus end","type":"exact"},{"name":"increased microtubule minus end shrinkage","type":"related"},{"name":"increased rate of microtubule catastrophe at minus end","type":"related"},{"name":"increased rate of microtubule depolymerisation at minus end","type":"exact"},{"name":"increased rate of microtubule depolymerization at minus end during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule depolymerization at minus end during vegetative growth","type":"exact"},{"name":"increased rate of minus-end specific microtubule depolymerization","type":"exact"}],"termid":"FYPO:0004617"}


id: PATO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001119 absolute momentum value (obsolete PATO:0001119)","termid":"PATO:0001119"}


id: MONDO:0018595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Single-organ polyarteritis nodosa (PAN) is a rare, often mild form of PAN characterized by limited disease without generalized manifestations, most often affecting the skin (cutaneous PAN), the brain, eyes, pancreas, testicles, ureter, breasts, or ovaries. Affected patients are often younger than those with systemic PAN and relapses appear to be more common.","definition_xrefs":["Orphanet:439755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary polyarteritis nodosa","termid":"MONDO:0018593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-organ polyarteritis nodosa","secondary_identifiers":["GARD:21832","MEDGEN:1842346","UMLS:C5680051"],"synonyms":[{"name":"single-organ PAN","type":"exact"},{"name":"single-organ periarteritis nodosa","type":"exact"}],"termid":"MONDO:0018595","xrefs":{"Monarch":{"xref_id":"0018595"}}}


id: GO:0010739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of protein kinase A signaling. PKA signaling is the series of reactions, mediated by the intracellular serine/threonine kinase protein kinase A, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase A signaling","termid":"GO:0010738"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"protein kinase A signaling","termid":"GO:0010737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein kinase A signaling","synonyms":[{"name":"positive regulation of PKA signaling cascade","type":"related"},{"name":"positive regulation of protein kinase A signaling cascade","type":"related"},{"name":"positive regulation of protein kinase A signalling cascade","type":"related"}],"termid":"GO:0010739"}


id: GO:1990650
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107760],"is_not":false,"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2,4,5,6-tetrakisphosphate + H2O = 1D-myo-inositol 2,4,6-trisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inositol-2,4,5,6-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990650","terms_by_termid":{"GO:1990650":null}}


id: PBO:0081565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 490","termid":"PBO:0081565"}


id: GO:0062149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of pain in which a stimulus is received and converted into a molecular signal.","definition_xrefs":["PMID:19837031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"part_of","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of stimulus involved in sensory perception of pain","termid":"GO:0062149"}


id: MONDO:0000147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic polyp","termid":"MONDO:0021075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyposis","secondary_identifiers":["NCIT:C4089","UMLS:C0334108","MEDGEN:137722","NANDO:2100257"],"synonyms":[{"name":"multiple polyps","type":"exact"},{"name":"polyposis","type":"exact"}],"termid":"MONDO:0000147","xrefs":{"Monarch":{"xref_id":"0000147"}}}


id: GO:0007051
data:
  {"annotated_genes":["SJAG_02045","SJAG_03062","SJAG_00244","SJAG_01270","SJAG_02737","SJAG_02286","SJAG_02332","SJAG_01805","SJAG_01215","SJAG_04841","SJAG_00794","SJAG_03540","SJAG_00078","SJAG_03673","SJAG_04901","SJAG_00930","SJAG_02795","SJAG_02624","SJAG_02509","SJAG_00229","SJAG_03116","SJAG_02761","SJAG_00773","SJAG_00856","SJAG_04745","SJAG_02336","SJAG_01546","SJAG_03835","SJAG_07018","SJAG_02609","SJAG_03345","SJAG_01297","SJAG_02246","SJAG_01224","SJAG_01837","SJAG_04412","SJAG_01785","SJAG_02529","SJAG_03915","SJAG_01613","SJAG_03073","SJAG_04464","SJAG_00514","SJAG_01756","SJAG_02886","SJAG_04003","SJAG_01760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109067],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990734"},{"annotations":[96787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[116384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[99871,105913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030953"},{"annotations":[75224,94274,94811],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[94275,96270,98723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090306"},{"annotations":[100922],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051232"},{"annotations":[100923,98724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140642"},{"annotations":[108310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000212"},{"annotations":[114567,93300],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990395"},{"annotations":[108485,98725,96271,102534],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[99877,100481,96790,110036,96373,109071,118100,96274,114491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090307"},{"annotations":[88774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"},{"annotations":[103383,117587,107721,118101,103031,106893,98730,100927],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000022"},{"annotations":[94277,99878,103032],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0061805"},{"annotations":[99352,96791,107722,103384,98131,99879,100928,94278],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0061804"},{"annotations":[98731,100929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[96792,98732,108313,100930,94279],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[98733,97781,89473,97357,116116,72864,96275,108314,87275,107723,93301,111578,97302,113388,103385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007052"},{"annotations":[110887],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[113373,90806,96374],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"},{"annotations":[110465],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"},{"annotations":[114494],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110162"},{"annotations":[89384],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060236"},{"annotations":[105917,100767,116634,99578,90900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051225"}]},"cv_name":"biological_process","definition":"A 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id: MONDO:0700159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor arising from odontogenic epithelium and occurs in a dog.","definition_xrefs":["NCIT:C134956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine acanthomatous epulis","termid":"MONDO:0700159","xrefs":{"Monarch":{"xref_id":"0700159"}}}


id: PBO:0091652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amf1","termid":"PBO:0091652"}


id: MONDO:0030976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculomotor-abducens synkinesis","secondary_identifiers":["UMLS:C5543116","OMIM:619215","MEDGEN:1789067"],"synonyms":[{"name":"OCABSN","type":"exact"}],"termid":"MONDO:0030976","xrefs":{"Monarch":{"xref_id":"0030976"}}}


id: PBO:0085483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable subtilisin-family protease; role in formation of the dityrosine layer of spore walls; localizes to the spore wall and also the nuclear envelope and ER region in mature spores","termid":"PBO:0085483"}


id: PBO:0052280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 6B","termid":"PBO:0052280"}


id: GO:0047260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-D-glucose + glucose-6-phosphate = alpha,alpha-trehalose 6-phosphate + GDP.","definition_xrefs":["EC:2.4.1.36","MetaCyc:2.4.1.36-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (GDP-forming) activity","secondary_identifiers":["RHEA:14605"],"synonyms":[{"name":"GDP-glucose-glucosephosphate glucosyltransferase activity","type":"related"},{"name":"GDP-glucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"related"},{"name":"GDPglucose-glucose-phosphate glucosyltransferase activity","type":"related"},{"name":"GDPglucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"related"},{"name":"guanosine diphosphoglucose-glucose phosphate glucosyltransferase activity","type":"related"},{"name":"trehalose phosphate synthase (GDP-forming) activity","type":"related"}],"termid":"GO:0047260"}


id: GO:0033308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hydroxyectoine across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transport","termid":"GO:0015697"},{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"hydroxyectoine transmembrane transport","synonyms":[{"name":"hydroxyectoine transport","type":"related"}],"termid":"GO:0033308"}


id: MONDO:0004514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic inflammation of the nasal cavity mucosa. It may lead to post-nasal drip resulting in chronic sore throat and chronic cough.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhinitis","termid":"MONDO:0003014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic rhinitis","secondary_identifiers":["SCTID:86094006","MEDGEN:3086","UMLS:C0008711","ICD9:472.0","DOID:8252","icd11.foundation:1346915097","NCIT:C34479"],"synonyms":[{"name":"rhinitis - chronic","type":"exact"},{"name":"rhinitis, chronic","type":"exact"}],"termid":"MONDO:0004514","xrefs":{"Monarch":{"xref_id":"0004514"}}}


id: PBO:0016517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M17 cytoplasmic leucyl aminopeptidase yspII (LAP yspII)","termid":"PBO:0016517"}


id: PBO:0025532
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-ketothiolase deficiency","termid":"PBO:0025532"}


id: PBO:0001444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate adaptor for cullin 3 ubiquitin ligase Btb3","termid":"PBO:0001444"}


id: MONDO:0056804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of peripheral nervous system","secondary_identifiers":["UMLS:C0751427","DOID:0080320","MEDGEN:199653"],"termid":"MONDO:0056804","xrefs":{"Monarch":{"xref_id":"0056804"}}}


id: CHEBI:22977
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A zinc group element atom that has formula Cd.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadmium atom","termid":"CHEBI:22977"}


id: MONDO:0008146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta type I is a mild type of osteogenesis imperfecta (OI), a genetic disorder characterized by increased bone fragility, low bone mass and susceptibility to bone fractures.","definition_xrefs":["Orphanet:216796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 1","secondary_identifiers":["NCIT:C99003","OMIM:166200","MEDGEN:9799","GARD:8694","icd11.foundation:1897905410","SCTID:385482004","DOID:0110334","UMLS:C0023931"],"synonyms":[{"name":"Adair-Dighton syndrome","type":"exact"},{"name":"OI type 1","type":"exact"},{"name":"OI, type 1","type":"related"},{"name":"OI1","type":"exact"},{"name":"Van der Hoeve syndrome","type":"exact"},{"name":"classic non-deforming OI with blue sclerae","type":"related"},{"name":"mild osteogenesis imperfecta","type":"exact"},{"name":"non-deforming osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta tarda","type":"related"},{"name":"osteogenesis imperfecta type 1","type":"exact"},{"name":"osteogenesis imperfecta type I","type":"exact"},{"name":"osteogenesis imperfecta with blue sclerae","type":"related"},{"name":"osteogenesis imperfecta, type 1","type":"related"},{"name":"osteogenesis imperfecta, type I","type":"related"}],"termid":"MONDO:0008146","xrefs":{"Monarch":{"xref_id":"0008146"}}}


id: FYPO:0000671
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118818,118819,118820],"is_not":false,"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation at the rDNA repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal rDNA separation","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","man1delta"],"synonyms":[{"name":"abnormal mitotic sister chromatid separation at rDNA","type":"exact"},{"name":"abnormal rDNA separation during mitosis","type":"exact"},{"name":"abnormal rDNA separation during mitotic cell cycle","type":"related"},{"name":"abnormal rDNA separation during vegetative growth","type":"exact"},{"name":"abnormal ribosomal DNA separation","type":"exact"},{"name":"abnormal segregation of nucleolar rDNA","type":"related"}],"termid":"FYPO:0000671","terms_by_termid":{"FYPO:0000671":null}}


id: MONDO:0007051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acromegaloid facial appearance (AFA) syndrome is a multiple congenital anomalies/dysmorphic syndrome with a probable autosomal dominant inheritance, characterized by a progressively coarse acromegaloid-like facial appearance with thickening of the lips and intraoral mucosa, large and doughy hands and, in some cases, developmental delay. AFA syndrome appears to be part of a phenotypic spectrum that includes hypertrichotic osteochondrodysplasia, Cantu type and hypertrichosis-acromegaloid facial appearance syndrome.","definition_xrefs":["Orphanet:965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromegaloid facial appearance syndrome","secondary_identifiers":["OMIM:102150","UMLS:C0796280","MEDGEN:167116","MESH:C535655","GARD:501","SCTID:720456009"],"synonyms":[{"name":"AFA syndrome","type":"related"},{"name":"acromegaloid facial appearance syndrome","type":"exact"},{"name":"thick lips and oral mucosa","type":"related"}],"termid":"MONDO:0007051","xrefs":{"Monarch":{"xref_id":"0007051"}}}


id: MONDO:1010616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital hypothyroidism in dogs in which the cause of the disease is a mutation in the SCL5AG gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, dog","termid":"MONDO:1010602"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyshormonogenic hypothyroidism with goiter, SLC5A5-related, dog","secondary_identifiers":["OMIA:002174-9615"],"termid":"MONDO:1010616","xrefs":{"Monarch":{"xref_id":"1010616"}}}


id: PBO:0078236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 18","termid":"PBO:0078236"}


id: PBO:0055553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2989","termid":"PBO:0055553"}


id: GO:0019857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving 5-methylcytosine, a methylated base of DNA.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-methylcytosine metabolic process (obsolete GO:0019857)","synonyms":[{"name":"5-methylcytosine metabolism","type":"exact"}],"termid":"GO:0019857"}


id: _global:has_component
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"_global:has_part"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component","secondary_identifiers":["RO:0002180"],"termid":"_global:has_component"}


id: GO:0033241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways leading to the breakdown of amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"regulates","term_name":"amine catabolic process","termid":"GO:0009310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amine catabolic process","synonyms":[{"name":"regulation of amine breakdown","type":"exact"},{"name":"regulation of amine catabolism","type":"exact"},{"name":"regulation of amine degradation","type":"exact"},{"name":"regulation of cellular amine catabolic process","type":"exact"}],"termid":"GO:0033241"}


id: GO:1901755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vitamin D3.","definition_xrefs":["GOC:TermGenie","Unipathway:UPA00955","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D biosynthetic process","termid":"GO:0042368"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"vitamin D3 biosynthetic process","synonyms":[{"name":"calciol anabolism","type":"exact"},{"name":"calciol biosynthesis","type":"exact"},{"name":"calciol biosynthetic process","type":"exact"},{"name":"calciol formation","type":"exact"},{"name":"calciol synthesis","type":"exact"},{"name":"cholecalciferol biosynthesis","type":"exact"},{"name":"cholecalciferol biosynthetic process","type":"exact"},{"name":"vitamin D3 anabolism","type":"exact"},{"name":"vitamin D3 biosynthesis","type":"exact"},{"name":"vitamin D3 formation","type":"exact"},{"name":"vitamin D3 synthesis","type":"exact"}],"termid":"GO:1901755"}


id: PR:000050542
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein gtr1 (Schizosaccharomyces pombe) that is non-covalently bound to GDP.","definition_xrefs":["PMID:27227887","PMID:33534698","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein gtr1 (Schizosaccharomyces pombe)","termid":"PR:000050541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gtr1/GDP+","pombase_gene_id":"SPBC337.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein gtr1, GDP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gtr1/GDP+","type":"exact"},{"name":"gtr1/GDP+","type":"exact"},{"name":"Gtr1/GDP+","type":"exact"}],"termid":"PR:000050542"}


id: PBO:0017720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase for elongation factor EF2 Efm3 (predicted)","termid":"PBO:0017720"}


id: FYPO:0005386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin along chromosome arms is decreased.","definition_xrefs":["PMID:16682348","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at chromosome arms","synonyms":[{"name":"decreased protein localisation to chromatin at chromosome arms","type":"exact"},{"name":"decreased protein localization to chromatin along chromosome arms","type":"exact"},{"name":"decreased protein localization to chromatin at chromosome arms during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromosome arms during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at chromosome arms","type":"exact"}],"termid":"FYPO:0005386"}


id: GO:1901206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901206)","synonyms":[{"name":"activation of adrenergic receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"activation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"positive regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up-regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"upregulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901206"}


id: GO:0042870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-glucarate, the D-enantiomer of glucarate, is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:jsg","GOC:jl","ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"aldarate transmembrane transport","termid":"GO:0042869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"D-glucarate transmembrane transport","synonyms":[{"name":"D-glucarate transport","type":"related"}],"termid":"GO:0042870"}


id: PR:Q10326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 8 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.01","synonyms":[{"name":"Spom972h-mug8","type":"exact"}],"termid":"PR:Q10326"}


id: PBO:0058933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS18 kinetochore protein A","termid":"PBO:0058933"}


id: PBO:0004662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase epsilon subunit (predicted)","termid":"PBO:0004662"}


id: MONDO:0010412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-craniofacioskeletal syndrome is a rare, hereditary, syndromic intellectual disability characterized by craniofacial and skeletal abnormalities in association with mild intellectual disability in females and early postnatal lethality in males. In addition to mild cognitive impairment, females present with microcephaly, short stature, skeletal features and extra temporal lobe gyrus. In males, intrauterine growth impairment, cardiac and urogenital anomalies have been reported.","definition_xrefs":["Orphanet:163979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-craniofacioskeletal syndrome","secondary_identifiers":["GARD:17009","OMIM:300712","MEDGEN:394716","UMLS:C2678036","MESH:C567471"],"synonyms":[{"name":"craniofacioskeletal syndrome","type":"related"},{"name":"craniofacioskeletal syndrome, X-linked recessive, X-linked dominant","type":"exact"}],"termid":"MONDO:0010412","xrefs":{"Monarch":{"xref_id":"0010412"}}}


id: GO:0008518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Folate derivative (out) + anion (in) = folate derivative (in) + anion (out). The Reduced Folate Carrier (RCF(SLC19A1) acts by an antiport mechanism. RCF carries several folate derivatives: MTX, PMX, ratitrexed, pralatrexate, 5-methyl THF, and 5-formyl THF.","definition_xrefs":["PMID:24745983","GOC:mtg_transport","TC:2.A.48","PMID:21568705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"folate:monoatomic anion antiporter activity","synonyms":[{"name":"folate:anion antiporter activity","type":"broad"},{"name":"reduced folate carrier activity","type":"related"},{"name":"reduced folate transmembrane transporter activity","type":"related"},{"name":"reduced folate transporter","type":"related"}],"termid":"GO:0008518"}


id: PBO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements human PIGW","termid":"PBO:0002627"}


id: PBO:0087763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2 membrane-associated complex; involved in regulation of actin cytoskeletal dynamics during polarized growth and cell wall integrity; interacts with Slm1p and Slm2p, homologous PH domain-containing TORC2 substrates; BIT2 has a paralog, BIT61, that arose from the whole genome duplication","termid":"PBO:0087763"}


id: PR:000036301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal-type cyclin-dependent kinase 1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"},{"relation_name":"is_a","term_name":"fungal-type cyclin-dependent kinase 1","termid":"PR:000037486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"CDK1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc2","type":"exact"},{"name":"cdk1","type":"related"},{"name":"cell division control protein 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"cell division protein kinase 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"p34 protein kinase (Schizosaccharomyces pombe)","type":"exact"},{"name":"pi002, SPBC11B10.09","type":"related"},{"name":"swo2","type":"related"}],"termid":"PR:000036301"}


id: MONDO:0007133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anonychia-onychodystrophy with brachydactyly type b and ectrodactyly","secondary_identifiers":["MESH:C536379","UMLS:C1862842","OMIM:106990","GARD:711","MEDGEN:400143","Orphanet:2355"],"synonyms":[{"name":"Kumar-Levick syndrome","type":"exact"},{"name":"anonychia-onychodystrophy with brachydactyly type b and ectrodactyly","type":"exact"},{"name":"autosomal dominant onychodystrophy and anonychia with type B brachydactyly and ectrodactyly","type":"related"}],"termid":"MONDO:0007133","xrefs":{"Monarch":{"xref_id":"0007133"}}}


id: PBO:0058722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6850","termid":"PBO:0058722"}


id: GO:0019681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways by which acetyl-CoA is processed and converted into alpha-ketoglutarate (2-oxoglutarate); methanogenic archaea use these pathways to assimilate acetyl-CoA into the cell.","definition_xrefs":["MetaCyc:P22-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"acetyl-CoA catabolic process","termid":"GO:0046356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0044248","GO:0055086"],"is_obsolete":false,"name":"acetyl-CoA assimilation pathway","synonyms":[{"name":"acetyl-CoA catabolic process to 2-ketoglutarate","type":"exact"},{"name":"acetyl-CoA catabolic process to 2-oxoglutarate","type":"exact"},{"name":"acetyl-CoA catabolic process to alpha-ketoglutarate","type":"exact"},{"name":"acetyl-CoA catabolic process to alpha-oxoglutarate","type":"exact"},{"name":"acetyl-CoA catabolism to 2-ketoglutarate","type":"exact"},{"name":"acetyl-CoA catabolism to 2-oxoglutarate","type":"exact"},{"name":"acetyl-CoA catabolism to alpha-ketoglutarate","type":"exact"},{"name":"acetyl-CoA catabolism to alpha-oxoglutarate","type":"exact"}],"termid":"GO:0019681"}


id: GO:0031866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP3 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"EP3 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP3 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP3 receptor binding","type":"exact"}],"termid":"GO:0031866"}


id: GO:2000334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood microparticle formation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of blood microparticle formation","termid":"GO:2000332"},{"relation_name":"positively_regulates","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood microparticle formation","synonyms":[{"name":"positive regulation of microparticle generation","type":"exact"},{"name":"positive regulation of microparticle release","type":"exact"}],"termid":"GO:2000334"}


id: PBO:0080908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma","termid":"PBO:0080908"}


id: GO:0075138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting oxygen tension in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host oxygen tension environment","synonyms":[{"name":"response of symbiont to host oxygen tension environment","type":"exact"}],"termid":"GO:0075138"}


id: PBO:0074125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 8","termid":"PBO:0074125"}


id: PBO:0004420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease, predicted Meu22","termid":"PBO:0004420"}


id: GO:0070307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a lens fiber cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a lens fiber cell fate. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell development","synonyms":[{"name":"lens fibre cell development","type":"exact"}],"termid":"GO:0070307"}


id: PBO:0056185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF transcriptional regulator RNA","termid":"PBO:0056185"}


id: MONDO:0957218
data:
  {"annotated_genes":["SJAG_01522"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86049],"is_not":false,"summary":null,"term":"MONDO:0957218"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly and speech delay, with or without brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1841049","OMIM:620317","UMLS:C5830413"],"termid":"MONDO:0957218","terms_by_termid":{"MONDO:0957218":null},"xrefs":{"Monarch":{"xref_id":"0957218"}}}


id: SO:0002094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genomic region at a non-allelic position where exchange of genetic material happens as a result of homologous recombination.","direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_hotspot","termid":"SO:0000339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_allelic_homologous_recombination_region","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:non_allelic_homologous","type":"exact"},{"name":"INSDC_qualifier:non_allelic_homologous_recombination","type":"exact"},{"name":"NAHRR","type":"exact"},{"name":"non allelic homologous recombination region","type":"exact"}],"termid":"SO:0002094"}


id: MONDO:0018908
data:
  {"annotated_genes":["SJAG_00980","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85709,85710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"}]},"cv_name":"mondo","definition":"Distinct from Hodgkin lymphoma both morphologically and biologically, non-Hodgkin lymphoma (NHL) is characterized by the absence of Reed-Sternberg cells, can occur at any age, and usually presents as a localized or generalized lymphadenopathy associated with fever and weight loss. The clinical course varies according to the morphologic type. NHL is clinically classified as indolent, aggressive, or having a variable clinical course. NHL can be of B-or T-/NK-cell lineage.","definition_xrefs":["NCIT:C3211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_02460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"non-Hodgkin lymphoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:NHL","MedDRA:10029547","UMLS:C0024305","Orphanet:547","EFO:0005952","ICDO:9591/3","DOID:0060060","MESH:D008228","MEDGEN:6160"],"synonyms":[{"name":"NHL","type":"exact"},{"name":"non-Hodgkin lymphoma","type":"exact"},{"name":"non-Hodgkin's lymphoma","type":"exact"},{"name":"non-Hodgkin's lymphoma (NHL)","type":"exact"},{"name":"non-Hodgkins lymphoma","type":"exact"}],"termid":"MONDO:0018908","terms_by_termid":{"MONDO:0011508":null},"xrefs":{"Monarch":{"xref_id":"0018908"}}}


id: GO:0019886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class II","secondary_identifiers":["GO:0048005","Reactome:R-HSA-2132295","GO:0042591"],"synonyms":[{"name":"antigen presentation, exogenous antigen via MHC class II","type":"broad"},{"name":"antigen presentation, exogenous peptide antigen","type":"broad"},{"name":"antigen processing, exogenous antigen via major histocompatibility complex class II","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0019886"}


id: FYPO:0005063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 4 of histone H3 at the mating type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K4 methylation at mating type locus during vegetative growth","synonyms":[{"name":"increased histone H3 K4 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 methylation at mating type locus during mitotic cell cycle","type":"related"},{"name":"increased histone H3K4 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3K4me at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 methylation at mating type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005063"}


id: PBO:0038772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T1","termid":"PBO:0038772"}


id: GO:0060414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the smooth muscle tissue surrounding the aorta is generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body.","definition_xrefs":["GOC:dph","GOC:dgh","Wikipedia:Aorta","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue morphogenesis","termid":"GO:0060415"},{"relation_name":"part_of","term_name":"aorta morphogenesis","termid":"GO:0035909"},{"relation_name":"part_of","term_name":"smooth muscle tissue development","termid":"GO:0048745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aorta smooth muscle tissue morphogenesis","termid":"GO:0060414"}


id: PBO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1 repeat protein","termid":"PBO:0000212"}


id: PBO:0043157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 25","termid":"PBO:0043157"}


id: MONDO:0007479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, Levi type","secondary_identifiers":["OMIM:127100","MESH:C565081","MEDGEN:338837","UMLS:C1851994"],"synonyms":[{"name":"dwarfism Levi type","type":"related"},{"name":"dwarfism Levi's type","type":"related"},{"name":"dwarfism, Levi type","type":"exact"},{"name":"snub-nosed type of dwarfism","type":"related"}],"termid":"MONDO:0007479","xrefs":{"Monarch":{"xref_id":"0007479"}}}


id: GO:0009727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an ethylene (ethene) stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to ethylene","termid":"GO:0009723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of ethylene stimulus","synonyms":[{"name":"detection of ethene stimulus","type":"exact"},{"name":"perception of ethene stimulus","type":"related"},{"name":"perception of ethylene stimulus","type":"related"}],"termid":"GO:0009727"}


id: FYPO:0005053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RITS complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal RITS complex assembly","synonyms":[{"name":"abnormal RITS complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal RITS complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005053"}


id: MOD:00506
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, Hex(5) HexNAc(2)","definition_xrefs":["PubMed:5490222","Unimod:137#N","PubMed:111247","RESID:AA0151#var","PubMed:1694179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-linked glycan core N4-glycosylated asparagine","synonyms":[{"name":"Hex(5)HexNAc(2)","type":"related"},{"name":"N-linked glycan core","type":"related"}],"termid":"MOD:00506"}


id: GO:0031658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G1/S transition of the cell cycle.","definition_xrefs":["GOC:dph","GOC:mah","GOC:pr","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle (obsolete GO:0031658)","synonyms":[{"name":"G1/S-specific down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific inhibition of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G1/S-specific negative regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of cyclin-dependent protein kinase activity during G1/S","type":"related"},{"name":"negative regulation of cyclin-dependent protein kinase activity involved in G1/S","type":"broad"}],"termid":"GO:0031658"}


id: PR:Q9P7H0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23105:SF12","OMA:SCHPO01976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.10c","secondary_identifiers":["UniProtKB:Q9P7H0"],"synonyms":[{"name":"H/ACA snoRNP protein NHP2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"P17-nhp2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NHP2","type":"exact"},{"name":"high mobility group-like nuclear protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7H0"}


id: PBO:0029082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_spindle_pole_body","termid":"PBO:0029082"}


id: PBO:0026999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_mitotic_G1_phase","termid":"PBO:0026999"}


id: GO:0017116
data:
  {"annotated_genes":["SJAG_02348","SJAG_02199","SJAG_00857","SJAG_01354","SJAG_00884","SJAG_04210","SJAG_03780","SJAG_01762","SJAG_04183","SJAG_02822"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91474,94566,103650,109687,111978,114557],"is_not":false,"summary":null,"term":"GO:0017116"},{"annotations":[108548,106719,105900,114729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990518"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of a DNA helix.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase activity","termid":"GO:0003678"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02199":null,"SJAG_02348":null,"SJAG_02822":null,"SJAG_03780":null,"SJAG_04183":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"single-stranded DNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043142"],"synonyms":[{"name":"single-stranded DNA-dependent ATP-dependent DNA helicase activity","type":"exact"},{"name":"single-stranded DNA-dependent ATPase activity","type":"exact"},{"name":"ssDNA-dependent ATP-dependent DNA helicase activity","type":"exact"},{"name":"ssDNA-dependent ATPase activity","type":"exact"}],"termid":"GO:0017116","terms_by_termid":{"GO:0017116":null,"GO:1990518":null}}


id: PBO:0059959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 4","termid":"PBO:0059959"}


id: FYPO:0007594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitophagy","termid":"FYPO:0000499"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitophagy during nitrogen starvation","synonyms":[{"name":"abolished autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"abolished autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"abolished autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"autophagy of mitochondrion abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007594"}


id: RO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds via some environmental process","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evolutionarily_related_to","termid":"RO:0002320"}


id: MONDO:0013888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any essential tremor in which the cause of the disease is a mutation in the FUS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 4","secondary_identifiers":["UMLS:C3539195","OMIM:614782","DOID:0111431","MEDGEN:761337"],"synonyms":[{"name":"ETM4","type":"related"},{"name":"FUS essential tremor","type":"exact"},{"name":"essential tremor caused by mutation in FUS","type":"exact"},{"name":"essential tremor, hereditary, 4","type":"exact"},{"name":"tremor, hereditary essential, 4","type":"exact"},{"name":"tremor, hereditary essential, type 4","type":"exact"}],"termid":"MONDO:0013888","xrefs":{"Monarch":{"xref_id":"0013888"}}}


id: GO:0051620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of norepinephrine into a cell, typically presynaptic neurons or glial cells. Norepinephrine (3,4-dihydroxyphenyl-2-aminoethanol) is a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine transport","termid":"GO:0015874"},{"relation_name":"is_a","term_name":"catecholamine uptake","termid":"GO:0090493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"norepinephrine uptake","synonyms":[{"name":"levarterenol reuptake","type":"exact"},{"name":"levarterenol uptake","type":"exact"},{"name":"noradrenaline reuptake","type":"exact"},{"name":"noradrenaline uptake","type":"exact"},{"name":"norepinephrine import","type":"exact"},{"name":"norepinephrine reuptake","type":"exact"}],"termid":"GO:0051620"}


id: FYPO:0006421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Fbh1 (also called Rad22) accumulates is lower than normal.","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of Fbh1 foci during vegetative growth","synonyms":[{"name":"decreased number of Fbh1 foci during mitotic cell cycle","type":"related"},{"name":"reduced number of Fbh1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0006421"}


id: PBO:0085203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p; may bind the kinetochore to spindle microtubules; required for the spindle assembly checkpoint; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-I and fission yeast mis6","termid":"PBO:0085203"}


id: PBO:0002542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim13 (predicted)","termid":"PBO:0002542"}


id: PBO:0062157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 6B pseudogene","termid":"PBO:0062157"}


id: MONDO:1011857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive cerebellar abiotrophy, non-human animal","secondary_identifiers":["OMIA:000826"],"termid":"MONDO:1011857","xrefs":{"Monarch":{"xref_id":"1011857"}}}


id: PATO:0000384
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male","termid":"PATO:0000384"}


id: GO:0015871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of choline into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"choline transport","termid":"GO:0015871"}


id: PBO:0080258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 21 pseudogene","termid":"PBO:0080258"}


id: PBO:0090437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide mannosyltransferase activity Imt1","termid":"PBO:0090437"}


id: PBO:0041048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 4","termid":"PBO:0041048"}


id: PBO:0072276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 5","termid":"PBO:0072276"}


id: MONDO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the larynx. The majority are carcinomas.","definition_xrefs":["NCIT:C7484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"laryngeal neoplasm","termid":"MONDO:0021071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"larynx cancer","secondary_identifiers":["UMLS:C0007107","EFO:1000354","DOID:2596","ICD9:161","MEDGEN:2868","SCTID:363429002","ICD9:161.9","ICD9:161.8"],"synonyms":[{"name":"cancer of larynx","type":"exact"},{"name":"larynx cancer","type":"exact"},{"name":"malignant laryngeal neoplasm","type":"exact"},{"name":"malignant laryngeal tumor","type":"exact"},{"name":"malignant laryngeal tumour","type":"exact"},{"name":"malignant larynx neoplasm","type":"exact"},{"name":"malignant larynx tumor","type":"exact"},{"name":"malignant larynx tumour","type":"exact"},{"name":"malignant neoplasm of larynx","type":"exact"},{"name":"malignant neoplasm of the larynx","type":"exact"},{"name":"malignant tumor of larynx","type":"exact"},{"name":"malignant tumor of the larynx","type":"exact"},{"name":"malignant tumour of larynx","type":"exact"},{"name":"malignant tumour of the larynx","type":"exact"}],"termid":"MONDO:0002352","xrefs":{"Monarch":{"xref_id":"0002352"}}}


id: PBO:0082803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; yeast specific, no metazoan counterpart","termid":"PBO:0082803"}


id: PBO:0063951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin induced protein","termid":"PBO:0063951"}


id: MONDO:0030923
data:
  {"annotated_genes":["SJAG_04489","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[84853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_04489":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:105500"],"termid":"MONDO:0030923","terms_by_termid":{"MONDO:0010936":null,"MONDO:0013501":null},"xrefs":{"Monarch":{"xref_id":"0030923"}}}


id: PBO:0056579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple C2 and transmembrane domain containing 2","termid":"PBO:0056579"}


id: PBO:0028690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore-specific_spindle_pole_body_remodeling","termid":"PBO:0028690"}


id: PBO:0067725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 23","termid":"PBO:0067725"}


id: PBO:0067219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 286, pseudogene","termid":"PBO:0067219"}


id: GO:0099556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of carbon monoxide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by carbon monoxide","termid":"GO:0099549"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by carbon monoxide, modulating synaptic transmission","termid":"GO:0099556"}


id: MONDO:0800366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal dominant 4","secondary_identifiers":["DOID:0070020","UMLS:C3808802","MEDGEN:815132"],"synonyms":[{"name":"DKCA4","type":"exact"}],"termid":"MONDO:0800366","xrefs":{"Monarch":{"xref_id":"0800366"}}}


id: PBO:0085524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S25, no bacterial homolog; RPS25B has a paralog, RPS25A, that arose from the whole genome duplication","termid":"PBO:0085524"}


id: SO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded RNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_sequence_secondary_structure","synonyms":[{"name":"RNA sequence secondary structure","type":"exact"}],"termid":"SO:0000122"}


id: PBO:0044088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A8","termid":"PBO:0044088"}


id: PBO:0061025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 8","termid":"PBO:0061025"}


id: PBO:0078277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 10-1","termid":"PBO:0078277"}


id: PBO:0031097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_mitotic_spindle","termid":"PBO:0031097"}


id: GO:0090619
data:
  {"annotated_genes":["SJAG_05196","SJAG_01613","SJAG_02320","SJAG_02368","SJAG_01805","SJAG_01546","SJAG_01464","SJAG_03915","SJAG_02241","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90795,93288,93361,94267,96263,98709,99395,102296,106560,118266],"is_not":false,"summary":null,"term":"GO:0090619"}]},"cv_name":"cellular_component","definition":"Either of the ends of a meiotic spindle, a spindle that forms as part of meiosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["GOC:ha","PMID:18250200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole","termid":"GO:0000922"},{"relation_name":"part_of","term_name":"meiotic spindle","termid":"GO:0072687"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_03915":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"meiotic spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090619","terms_by_termid":{"GO:0090619":null}}


id: PBO:0004584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-glucan synthase Mok13","termid":"PBO:0004584"}


id: PBO:0069413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 674, pseudogene","termid":"PBO:0069413"}


id: GO:0099164
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane component of the postsynaptic specialization of a symmetric synapse. This is the region of the postsynaptic membrane in which the population of neurotransmitter receptors involved in synaptic transmission are concentrated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization membrane","termid":"GO:0099634"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"postsynaptic specialization membrane of symmetric synapse","termid":"GO:0099164"}


id: PBO:0078497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 1-1","termid":"PBO:0078497"}


id: SO:0000132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligo used for polymerase chain reaction.","direct_ancestors":[{"relation_name":"has_quality","term_name":"reverse","termid":"SO:0001031"},{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reverse_primer","synonyms":[{"name":"DNA reverse primer","type":"exact"},{"name":"reverse DNA primer","type":"exact"},{"name":"reverse primer","type":"exact"},{"name":"reverse primer oligo","type":"exact"},{"name":"reverse primer oligonucleotide","type":"exact"},{"name":"reverse primer sequence","type":"exact"}],"termid":"SO:0000132"}


id: PBO:0085772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII-coated vesicles; forms a complex with Erv46p; involved in the membrane fusion stage of transport; has homology to human ERGIC2 (PTX1) protein","termid":"PBO:0085772"}


id: MONDO:0015878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with autism (obsolete MONDO:0015878)","secondary_identifiers":["Orphanet:180772"],"termid":"MONDO:0015878","xrefs":{"Monarch":{"xref_id":"0015878"}}}


id: MONDO:0012923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital generalized lipodystrophy in which the cause of the disease is a mutation in the CAV1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"},{"relation_name":"is_a","term_name":"Berardinelli-Seip congenital lipodystrophy","termid":"MONDO:0018883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"congenital generalized lipodystrophy type 3","secondary_identifiers":["MEDGEN:436541","MESH:C567282","OMIM:612526","UMLS:C2675861","GARD:13389","DOID:0111137"],"synonyms":[{"name":"BSCL3","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy type 3","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy, type 3","type":"related"},{"name":"CAV1 congenital generalised lipodystrophy (disease)","type":"exact"},{"name":"CAV1 congenital generalized lipodystrophy (disease)","type":"exact"},{"name":"CGL3","type":"exact"},{"name":"congenital generalised lipodystrophy (disease) caused by mutation in CAV1","type":"exact"},{"name":"congenital generalized lipodystrophy (disease) caused by mutation in CAV1","type":"exact"},{"name":"lipodystrophy, Berardinelli-Seip congenital, type 3","type":"related"},{"name":"lipodystrophy, congenital generalized, type 3","type":"related"},{"name":"type 3 Berardinelli-Seip congenital lipodystrophy","type":"related"}],"termid":"MONDO:0012923","xrefs":{"Monarch":{"xref_id":"0012923"}}}


id: PBO:0063759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 1","termid":"PBO:0063759"}


id: PBO:0061563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase ecto","termid":"PBO:0061563"}


id: MONDO:0008617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 7q22.","definition_xrefs":["DOID:0110894","PMID:8841195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 11","secondary_identifiers":["UMLS:C2674051","MESH:C567154","MEDGEN:393069","OMIM:191390"],"synonyms":[{"name":"IBD11","type":"exact"},{"name":"inflammatory bowel disease 11","type":"exact"},{"name":"inflammatory bowel disease type 11","type":"exact"}],"termid":"MONDO:0008617","xrefs":{"Monarch":{"xref_id":"0008617"}}}


id: MONDO:0019971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma of soft tissue","secondary_identifiers":["GARD:19367","Orphanet:97338"],"synonyms":[{"name":"clear cell sarcoma of the tendons and aponeuroses","type":"exact"}],"termid":"MONDO:0019971","xrefs":{"Monarch":{"xref_id":"0019971"}}}


id: MONDO:0003555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the Bartholin gland and is characterized by the presence of malignant glandular epithelial cells and malignant squamous epithelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bartholin gland squamous cell carcinoma","termid":"MONDO:0004053"},{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Bartholin gland adenosquamous carcinoma","secondary_identifiers":["DOID:5630","MEDGEN:267339","UMLS:C1511050","NCIT:C40296"],"synonyms":[{"name":"Bartholin gland adenosquamous carcinoma","type":"exact"},{"name":"Bartholin's gland adenosquamous carcinoma","type":"exact"},{"name":"major vestibular gland adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0003555","xrefs":{"Monarch":{"xref_id":"0003555"}}}


id: MONDO:1012186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephropathy, non-human animal","termid":"MONDO:1011907"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, dog","secondary_identifiers":["OMIA:000710-9615"],"termid":"MONDO:1012186","xrefs":{"Monarch":{"xref_id":"1012186"}}}


id: MONDO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare aggressive malignant smooth muscle neoplasm, arising from the bone. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C7154"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteosarcoma","termid":"MONDO:0009807"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone leiomyosarcoma","secondary_identifiers":["UMLS:C1332579","DOID:3367","MEDGEN:234043"],"synonyms":[{"name":"bone leiomyosarcoma","type":"exact"},{"name":"bone tissue leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of bone","type":"exact"},{"name":"leiomyosarcoma of bone tissue","type":"exact"}],"termid":"MONDO:0002624","xrefs":{"Monarch":{"xref_id":"0002624"}}}


id: MONDO:0008170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the ovary. Most primary malignant ovarian neoplasms are either carcinomas (serous, mucinous, or endometrioid adenocarcinomas) or malignant germ cell tumors. Metastatic malignant neoplasms to the ovary include carcinomas, lymphomas, and melanomas.","definition_xrefs":["NCIT:C7431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian cancer","secondary_identifiers":["DOID:2394","ICD9:183.0","MEDGEN:216027","SCTID:363443007","MESH:D010051","GARD:7295","UMLS:C1140680","OMIM:167000","Orphanet:213500","icd11.foundation:685124533"],"synonyms":[{"name":"cancer of ovary","type":"exact"},{"name":"cancer of the ovary","type":"exact"},{"name":"malignant neoplasm of ovary","type":"exact"},{"name":"malignant neoplasm of the ovary","type":"exact"},{"name":"malignant ovarian neoplasm","type":"exact"},{"name":"malignant ovarian tumor","type":"exact"},{"name":"malignant ovarian tumour","type":"exact"},{"name":"malignant ovary neoplasm","type":"exact"},{"name":"malignant tumor of ovary","type":"exact"},{"name":"malignant tumor of the ovary","type":"exact"},{"name":"malignant tumour of ovary","type":"exact"},{"name":"malignant tumour of the ovary","type":"exact"},{"name":"ovarian cancer","type":"exact"},{"name":"ovarian cancer, epithelial","type":"related"},{"name":"ovarian cancer, somatic","type":"exact"},{"name":"ovarian malignant tumor","type":"exact"},{"name":"ovarian malignant tumour","type":"exact"},{"name":"ovarian neoplasm","type":"broad"},{"name":"ovary cancer","type":"exact"},{"name":"ovary neoplasm","type":"broad"},{"name":"primary ovarian cancer","type":"related"},{"name":"tumor of the ovary","type":"broad"},{"name":"tumour of the ovary","type":"broad"}],"termid":"MONDO:0008170","xrefs":{"Monarch":{"xref_id":"0008170"}}}


id: PATO:0001448
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's being hardened by the deposition of calcium into bone.","definition_xrefs":["MAMMALOGY:MAMMALOGY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcified","termid":"PATO:0001447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ossified","termid":"PATO:0001448"}


id: FYPO:0001726
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-cysteine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular sulfur level","termid":"FYPO:0001544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular cysteine level","synonyms":[{"name":"normal cellular L-cysteine level","type":"exact"},{"name":"normal cellular cysteine level during mitotic cell cycle","type":"related"},{"name":"normal cellular cysteine level during vegetative growth","type":"exact"},{"name":"normal level of cysteine in cell","type":"exact"}],"termid":"FYPO:0001726"}


id: MONDO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease IX (obsolete MONDO:0000366)","termid":"MONDO:0000366","xrefs":{"Monarch":{"xref_id":"0000366"}}}


id: GO:0009052
data:
  {"annotated_genes":["SJAG_00070","SJAG_04263","SJAG_00501","SJAG_03934"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88454,95865,107889,113253],"is_not":false,"summary":null,"term":"GO:0009052"}]},"cv_name":"biological_process","definition":"The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P.","definition_xrefs":["ISBN:0198506732","MetaCyc:NONOXIPENT-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"part_of","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_03934":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0055086"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"pentose-phosphate shunt, non-oxidative branch","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pentose phosphate pathway, non-oxidative branch","type":"exact"},{"name":"pentose phosphate shunt, non-oxidative branch","type":"exact"},{"name":"pentose-phosphate pathway, non-oxidative branch","type":"exact"}],"termid":"GO:0009052","terms_by_termid":{"GO:0009052":null}}


id: MONDO:0013631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung cancer","termid":"MONDO:0008903"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer susceptibility 5","secondary_identifiers":["MEDGEN:481786","OMIM:614210","UMLS:C3280156"],"synonyms":[{"name":"LNCR5","type":"exact"},{"name":"lung cancer susceptibility 5","type":"exact"}],"termid":"MONDO:0013631","xrefs":{"Monarch":{"xref_id":"0013631"}}}


id: PBO:0056613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male-enhanced antigen 1","termid":"PBO:0056613"}


id: PBO:0110340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C4A (Chido/Rodgers blood group)","termid":"PBO:0110340"}


id: GO:0008980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + propanoate = ADP + propanoyl phosphate.","definition_xrefs":["EC:2.7.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"propionate kinase activity","secondary_identifiers":["RHEA:23148"],"synonyms":[{"name":"ATP:propanoate phosphotransferase activity","type":"exact"},{"name":"PduW","type":"related"},{"name":"TdcD","type":"related"},{"name":"propanoate kinase activity","type":"exact"}],"termid":"GO:0008980"}


id: PBO:0041111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 4","termid":"PBO:0041111"}


id: MONDO:0021377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of lichen planus that is characterized by plaques of markedly thickened skin that is often extremely pruritic and localized to the lower legs. It can result in permanent pigmentation and scarring.","definition_xrefs":["NCIT:C34779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hypertrophic lichen planus","secondary_identifiers":["MEDGEN:9756","icd11.foundation:1096967508","SCTID:68266006","UMLS:C0023649"],"synonyms":[{"name":"Hypertrophic Lichen Planus","type":"related"},{"name":"Hypertrophic lichen planus","type":"related"},{"name":"Lichen planus hypertrophicus","type":"related"},{"name":"hypertrophic lichen planus","type":"exact"},{"name":"lichen planus hypertrophicus","type":"related"}],"termid":"MONDO:0021377","xrefs":{"Monarch":{"xref_id":"0021377"}}}


id: MONDO:0975755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eccrine angiomatous hamartoma","secondary_identifiers":["Orphanet:673568"],"termid":"MONDO:0975755","xrefs":{"Monarch":{"xref_id":"0975755"}}}


id: GO:0047762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-caffeate + O2 = 3-(2-carboxyethenyl)-cis,cis-muconate + 2 H+.","definition_xrefs":["RHEA:22216","EC:1.13.11.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"caffeate 3,4-dioxygenase activity","secondary_identifiers":["MetaCyc:CAFFEATE-34-DIOXYGENASE-RXN","KEGG_REACTION:R03365"],"synonyms":[{"name":"3,4-dihydroxy-trans-cinnamate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047762"}


id: MONDO:0020692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive spondylocostal dysostosis","termid":"MONDO:0010180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0024322","MONDO:0005066","MONDO:0005497"],"is_obsolete":false,"name":"spondylocostal dysostosis 1, autosomal recessive","secondary_identifiers":["DOID:0112365","GARD:10726","OMIM:277300"],"synonyms":[{"name":"SCDO1","type":"related"},{"name":"spondylocostal dysostosis 1, autosomal recessive","type":"exact"},{"name":"spondylothoracic dysostosis","type":"related"},{"name":"spondylothoracic dysplasia","type":"related"},{"name":"vertebral anomalies","type":"related"}],"termid":"MONDO:0020692","xrefs":{"Monarch":{"xref_id":"0020692"}}}


id: PBO:0013747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 interacting factor Sif3 (predicted)","termid":"PBO:0013747"}


id: PBO:0074550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 3","termid":"PBO:0074550"}


id: PBO:0051917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 2","termid":"PBO:0051917"}


id: GO:1905539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynapse to nucleus signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","ISBN:9780071120005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"postsynapse to nucleus signaling pathway","termid":"GO:0099527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of postsynapse to nucleus signaling pathway","synonyms":[{"name":"regulation of postsynaptic signaling to nucleus","type":"exact"}],"termid":"GO:1905539"}


id: GO:0044353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded, uncoated intracellular vesicle formed by the process of micropinocytosis.","definition_xrefs":["PMID:14732047","PMID:14731589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinosome","termid":"GO:0044352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"micropinosome","termid":"GO:0044353"}


id: PBO:0050599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 4","termid":"PBO:0050599"}


id: MONDO:0014946
data:
  {"annotated_genes":["SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86705],"is_not":false,"summary":null,"term":"MONDO:0014946"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03982":null},"genotype_count":0,"is_obsolete":false,"name":"Sifrim-Hitz-Weiss syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070529","Orphanet:653712","MEDGEN:934655","OMIM:617159","UMLS:C4310688"],"synonyms":[{"name":"SIHIWES","type":"exact"},{"name":"Sifrim-Hitz-Weiss multiple congenital anomalies-intellectual disability syndrome","type":"related"},{"name":"Sifrim-Hitz-Weiss multiple congenital anomalies-mental retardation syndrome","type":"related"},{"name":"Sifrim-Hitz-Weiss syndrome","type":"exact"},{"name":"Sifrim-Hitz-Weiss syndrome; SIHIWES","type":"exact"}],"termid":"MONDO:0014946","terms_by_termid":{"MONDO:0014946":null},"xrefs":{"Monarch":{"xref_id":"0014946"}}}


id: PBO:0057708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1295a","termid":"PBO:0057708"}


id: PBO:0063939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIMREG pseudogene 4","termid":"PBO:0063939"}


id: MONDO:0015983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic syndromic intellectual disability.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic syndromic intellectual disability (obsolete MONDO:0015983)","secondary_identifiers":["Orphanet:183763"],"synonyms":[{"name":"rare genetic syndromic intellectual disability","type":"exact"}],"termid":"MONDO:0015983","xrefs":{"Monarch":{"xref_id":"0015983"}}}


id: PR:O13912
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.06c","synonyms":[{"name":"Spom972h-SPAC23C11.06c","type":"exact"}],"termid":"PR:O13912"}


id: MONDO:0015686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma that arises from the peritoneum and resembles the malignant surface epithelial-stromal tumors that arise from the ovary. Serous adenocarcinoma is the most common histologic variant. It affects women almost exclusively. The diagnosis of primary peritoneal carcinoma can be made only if both ovaries are not involved by tumor, or, if the ovaries are involved, the tumor is confined to the ovarian surface without invasion of the ovarian stroma and the peritoneal involvement is greater than the ovarian surface involvement.","definition_xrefs":["NCIT:C40022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal carcinoma","termid":"MONDO:0002113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary peritoneal carcinoma","secondary_identifiers":["Orphanet:168829","GARD:20103","UMLS:C1514428","HP:0030406","MEDGEN:269516"],"synonyms":[{"name":"EOPPC","type":"exact"},{"name":"Extra-ovarian primary peritoneal carcinoma","type":"exact"},{"name":"PPC","type":"exact"},{"name":"primary peritoneal cancer","type":"exact"},{"name":"primary peritoneal carcinoma","type":"exact"},{"name":"primary peritoneal carcinoma (disease)","type":"exact"},{"name":"primary peritoneal serous carcinoma","type":"exact"},{"name":"serous surface papillary carcinoma","type":"exact"}],"termid":"MONDO:0015686","xrefs":{"Monarch":{"xref_id":"0015686"}}}


id: GO:0005922
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction.","definition_xrefs":["PMID:11146276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"gap junction","termid":"GO:0005921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"connexin complex","secondary_identifiers":["NIF_Subcellular:sao445019788"],"synonyms":[{"name":"connexon","type":"exact"},{"name":"connexon complex","type":"related"}],"termid":"GO:0005922"}


id: GO:0060242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which information about the density of cells in a population is received by direct cell-cell contact and is converted into a molecular signal, resulting in the cessation of cell growth or proliferation.","definition_xrefs":["PMID:17376520","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of cell density","termid":"GO:0060245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"contact inhibition","secondary_identifiers":["Wikipedia:Contact_inhibition","GO:0060246","GO:0060248"],"synonyms":[{"name":"detection of cell density by contact stimulus","type":"related"},{"name":"detection of cell density by contact stimulus involved in contact inhibition","type":"related"}],"termid":"GO:0060242"}


id: PBO:0043548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type II alpha 1 chain","termid":"PBO:0043548"}


id: GO:0015947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methane metabolic process","synonyms":[{"name":"methane metabolism","type":"exact"}],"termid":"GO:0015947"}


id: PBO:0062585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 9","termid":"PBO:0062585"}


id: GO:0035698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a CD8-positive, alpha-beta cytotoxic T cell from the blood vessels into the surrounding tissue.","definition_xrefs":["CL:0000794","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:0035698"}


id: PBO:0069617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 894, pseudogene","termid":"PBO:0069617"}


id: GO:1990355
data:
  {"annotated_genes":["SJAG_00419","SJAG_04953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95067,99496],"is_not":false,"summary":null,"term":"GO:1990355"}]},"cv_name":"biological_process","definition":"The generation of L-methionine from methionine sulphoxide.","definition_xrefs":["PMID:24118096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00419":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"L-methionine salvage from methionine sulphoxide","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"methionine salvage from methionine sulphoxide","type":"broad"}],"termid":"GO:1990355","terms_by_termid":{"GO:1990355":null}}


id: PBO:0054703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2112","termid":"PBO:0054703"}


id: GO:0005563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transfer RNA (obsolete GO:0005563)","synonyms":[{"name":"transfer RNA","type":"exact"}],"termid":"GO:0005563"}


id: MONDO:1011360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndromic disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic disease, non-human animal","termid":"MONDO:1011360","xrefs":{"Monarch":{"xref_id":"1011360"}}}


id: GO:0006704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glucocorticoid biosynthetic process","secondary_identifiers":["Reactome:R-HSA-194002"],"synonyms":[{"name":"glucocorticoid anabolism","type":"exact"},{"name":"glucocorticoid biosynthesis","type":"exact"},{"name":"glucocorticoid formation","type":"exact"},{"name":"glucocorticoid synthesis","type":"exact"}],"termid":"GO:0006704"}


id: PBO:0054300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1691","termid":"PBO:0054300"}


id: PBO:0075184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide F pseudogene 1","termid":"PBO:0075184"}


id: PBO:0064104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIWIL4 antisense RNA 1","termid":"PBO:0064104"}


id: PBO:0055871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC2 antisense RNA 1","termid":"PBO:0055871"}


id: GO:0007520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which non-proliferating myoblasts fuse to existing fibers or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"},{"relation_name":"part_of","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fusion","termid":"GO:0007520"}


id: MONDO:0018317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"growth retardation-mild developmental delay-chronic hepatitis syndrome","secondary_identifiers":["Orphanet:391366","GARD:21621","MEDGEN:1654119","UMLS:C4751595"],"termid":"MONDO:0018317","xrefs":{"Monarch":{"xref_id":"0018317"}}}


id: MONDO:0013050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal polymalformative syndrome, Boissel type","secondary_identifiers":["GARD:17110","MEDGEN:414158","Orphanet:210144","OMIM:612938","UMLS:C2752001","MESH:C567856"],"synonyms":[{"name":"GDFD","type":"related"},{"name":"growth retardation, developmental delay, and facial dysmorphism","type":"related"},{"name":"growth retardation, developmental delay, facial dysmorphism","type":"exact"}],"termid":"MONDO:0013050","xrefs":{"Monarch":{"xref_id":"0013050"}}}


id: PBO:0082190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldehyde reductase; involved in detoxification of lignocellulose-derived aldehydes; catalyzes the reduction of furan, aliphatic and aromatic aldehydes using either NADH or NADPH as co-factor; membrane of the quinone oxidoreductase subfamily of the medium-chain dehydrogenase/reductase family; null mutant displays sensitivity to DNA damaging agents; protein abundance increases in response to DNA replication stress","termid":"PBO:0082190"}


id: PBO:0081099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 24","termid":"PBO:0081099"}


id: PBO:0005587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase subunit Naa50 (predicted)","termid":"PBO:0005587"}


id: GO:0046303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2-nitropropane, a clear, colorless liquid with a mild, fruity odor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-nitropropane biosynthetic process (obsolete GO:0046303)","synonyms":[{"name":"2-nitropropane anabolism","type":"exact"},{"name":"2-nitropropane biosynthesis","type":"exact"},{"name":"2-nitropropane biosynthetic process","type":"exact"},{"name":"2-nitropropane formation","type":"exact"},{"name":"2-nitropropane synthesis","type":"exact"}],"termid":"GO:0046303"}


id: PBO:0044613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 15","termid":"PBO:0044613"}


id: PBO:0054303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1695","termid":"PBO:0054303"}


id: PBO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA ligase Trl1 (predicted)","termid":"PBO:0001502"}


id: GO:0032489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Cdc42 protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rho protein signal transduction","termid":"GO:0035023"},{"relation_name":"regulates","term_name":"Cdc42 protein signal transduction","termid":"GO:0032488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Cdc42 protein signal transduction","termid":"GO:0032489"}


id: MONDO:0015396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital laryngeal cyst is a rare larynx anomaly characterized by a cyst involving the larynx or supraglottis locations, such as the epiglottis and vallecula. Timing and severity of presentation depend on the size of the cyst and its proximity to the glottis and range from severe prenatal airway obstruction leading to polyhydramnios and pulmonary hypoplasia to postnatal inspiratory stridor associated with muffled cry, hoarseness and cyanotic episodes, and to feeding difficulties and failure to thrive. It can be associated with laryngomalacia.","definition_xrefs":["Orphanet:141124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital laryngeal cyst","secondary_identifiers":["GARD:19953","SCTID:765763007","icd11.foundation:591042640","UMLS:C0339880","MEDGEN:451040"],"termid":"MONDO:0015396","xrefs":{"Monarch":{"xref_id":"0015396"}}}


id: PBO:0074382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG5 nonsense mediated mRNA decay factor","termid":"PBO:0074382"}


id: PBO:0075712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP3 antisense RNA 1","termid":"PBO:0075712"}


id: PBO:0080827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 associated factor 2","termid":"PBO:0080827"}


id: FYPO:0001897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer cytoplasmic mRNA processing bodies (P-bodies) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"P-bodies present in decreased numbers","termid":"FYPO:0001898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"P-bodies present in decreased numbers during vegetative growth","synonyms":[{"name":"P bodies present in decreased numbers during vegetative growth","type":"exact"},{"name":"P-bodies present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"P-bodies present in reduced numbers during vegetative growth","type":"exact"},{"name":"cytoplasmic mRNA processing bodies present in decreased numbers during vegetative growth","type":"exact"},{"name":"decreased P-body formation during vegetative growth","type":"related"},{"name":"decreased P-body number during vegetative growth","type":"exact"},{"name":"decreased number of P-bodies present during vegetative growth","type":"related"},{"name":"fewer P-bodies present during vegetative growth","type":"exact"}],"termid":"FYPO:0001897"}


id: PBO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.5","termid":"PBO:0000100"}


id: MONDO:0958257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriatic arthritis-pyoderma gangrenosum-acne-hidradenitis suppurativa syndrome","secondary_identifiers":["Orphanet:641390","MEDGEN:1853239","UMLS:C5816786"],"synonyms":[{"name":"PSAPASH syndrome","type":"exact"}],"termid":"MONDO:0958257","xrefs":{"Monarch":{"xref_id":"0958257"}}}


id: PBO:0061057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nischarin","termid":"PBO:0061057"}


id: PBO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.86","termid":"PBO:0002283"}


id: PBO:0084371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid raft associated protein; overexpression restores Pma1p localization to lipid rafts which is required for targeting of Pma1p to the plasma membrane; sometimes classified in the medium-chain dehydrogenase/reductases (MDRs) superfamily; AST2 has a paralog, AST1, that arose from the whole genome duplication","termid":"PBO:0084371"}


id: MOD:00487
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:115#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized proline biotinylated with biotin-LC-hydrazide","synonyms":[{"name":"OxProBiotin","type":"related"},{"name":"Oxidized Proline biotinylated with biotin-LC-hydrazide","type":"related"}],"termid":"MOD:00487"}


id: PBO:0044946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 1","termid":"PBO:0044946"}


id: GO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates the transition from the initiation to the elongation phases of transcription by RNA polymerase II, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase and making contacts with elongation specific factors.","definition_xrefs":["PMID:15020047","PMID:22982364","GOC:txnOH","PMID:31628251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter clearance during DNA-templated transcription","termid":"GO:0001109"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA polymerase II promoter clearance","synonyms":[{"name":"promoter clearance from RNA polymerase II promoter","type":"exact"},{"name":"promoter escape from RNA polymerase II promoter","type":"exact"},{"name":"promoter-paused RNA polymerase II release","type":"exact"}],"termid":"GO:0001111"}


id: MONDO:0018677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic disorder in which symptoms are generally secondary to the abnormal location of the organs within the thoracic, abdominal, or peritoneal cavities. Anatomic and functional problems can include cardiac defects, intestinal malrotation leading to volvulus, biliary atresia, and various defects of the central nervous system, urinary tract, and skeleton.","definition_xrefs":["NCIT:C117273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visceral heterotaxy","secondary_identifiers":["Orphanet:450","GARD:10875","Orphanet:157769","icd11.foundation:780273165","DOID:0050545","MEDGEN:465273","MedDRA:10059119","MedDRA:10067265","UMLS:C3178805","OMIMPS:306955","SCTID:14821001"],"synonyms":[{"name":"heterotaxia","type":"exact"},{"name":"heterotaxia syndrome","type":"exact"},{"name":"heterotaxy syndrome","type":"exact"},{"name":"heterotaxy, visceral","type":"exact"},{"name":"incomplete situs inversus","type":"exact"},{"name":"lateralization defect","type":"exact"},{"name":"partial situs inversus","type":"exact"},{"name":"situs ambiguous","type":"exact"},{"name":"situs ambiguus","type":"exact"},{"name":"visceral heterotaxy","type":"exact"}],"termid":"MONDO:0018677","xrefs":{"Monarch":{"xref_id":"0018677"}}}


id: PBO:0044391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 8","termid":"PBO:0044391"}


id: MONDO:0004530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cervical adenocarcinoma with minimal stromal invasion. The risk of local lymph node metastasis is insignificant and the prognosis is excellent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"early invasive cervical adenocarcinoma","secondary_identifiers":["NCIT:C36096","DOID:8307","UMLS:C1333369","MEDGEN:232144"],"synonyms":[{"name":"cervical microinvasive adenocarcinoma","type":"exact"}],"termid":"MONDO:0004530","xrefs":{"Monarch":{"xref_id":"0004530"}}}


id: PBO:0084913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic exit network regulator; forms GTPase-activating Bfa1p-Bub2p complex that binds Tem1p and spindle pole bodies, blocks cell cycle progression before anaphase in response to spindle and kinetochore damage","termid":"PBO:0084913"}


id: PBO:0074618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 18","termid":"PBO:0074618"}


id: PBO:0000770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L38 (predicted)","termid":"PBO:0000770"}


id: GO:0098851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to double-stranded miRNA. double-stranded miRNA is formed by processing of pre-miRNA stem-loop structures.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:BHF_miRNA","PMID:19966796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded RNA binding","termid":"GO:0003725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"double-stranded miRNA binding","synonyms":[{"name":"miRNA duplex binding","type":"exact"}],"termid":"GO:0098851"}


id: PBO:0043857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium release activated channel regulator 2B","termid":"PBO:0043857"}


id: PBO:0039434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANK3 divergent transcript","termid":"PBO:0039434"}


id: PR:Q10269
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- are1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol O-acyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.05","synonyms":[{"name":"Spom972h-are1","type":"exact"},{"name":"sterol-ester synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10269"}


id: PBO:0072361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 47","termid":"PBO:0072361"}


id: GO:0018940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen, and synthesized, probably as a fungicide, by some higher plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orcinol metabolic process","secondary_identifiers":["MetaCyc:P342-PWY","UM-BBD_pathwayID:orc"],"synonyms":[{"name":"orcin metabolic process","type":"exact"},{"name":"orcin metabolism","type":"exact"},{"name":"orcinol metabolism","type":"exact"}],"termid":"GO:0018940"}


id: GO:0060261
data:
  {"annotated_genes":["SJAG_00342","SJAG_02391","SJAG_00150","SJAG_02494","SJAG_03061","SJAG_04099","SJAG_04705","SJAG_02849","SJAG_03573","SJAG_02551","SJAG_00297","SJAG_00909","SJAG_03421","SJAG_05341","SJAG_03622","SJAG_04647","SJAG_00766","SJAG_01771","SJAG_01952","SJAG_00904","SJAG_05203","SJAG_03590","SJAG_04820","SJAG_01403"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86972,89879,90194,93845,93955,94884,95367,98180,98528,101447,102901,103162,105161,105511,105706,105839,108182,108209,108494,114176,114741,118367],"is_not":false,"summary":null,"term":"GO:0060261"},{"annotations":[114630,89221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:tb","GOC:dph","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription initiation","termid":"GO:2000144"},{"relation_name":"positively_regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060261","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: PBO:0065772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Q-nucleotide N-glycosylase 1","termid":"PBO:0065772"}


id: PBO:0045928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain containing 1","termid":"PBO:0045928"}


id: GO:0046189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol-containing compound biosynthetic process","synonyms":[{"name":"phenol-containing compound anabolism","type":"exact"},{"name":"phenol-containing compound biosynthesis","type":"exact"},{"name":"phenol-containing compound formation","type":"exact"},{"name":"phenol-containing compound synthesis","type":"exact"}],"termid":"GO:0046189"}


id: MONDO:0859228
data:
  {"annotated_genes":["SJAG_03014"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86636],"is_not":false,"summary":null,"term":"MONDO:0859228"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 55","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619743","DOID:0070428","MEDGEN:1806598","UMLS:C5676915"],"termid":"MONDO:0859228","terms_by_termid":{"MONDO:0859228":null},"xrefs":{"Monarch":{"xref_id":"0859228"}}}


id: PBO:0052307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0319","termid":"PBO:0052307"}


id: PR:O43060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03575","PANTHER:PTHR10540:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.07","secondary_identifiers":["UniProtKB:O43060"],"synonyms":[{"name":"Spom972h-EIF3F","type":"exact"},{"name":"eIF3f (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43060"}


id: PBO:0053968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1278","termid":"PBO:0053968"}


id: MONDO:0017008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome X","secondary_identifiers":["GARD:20916","UMLS:C5679687","Orphanet:263768","MEDGEN:1825971"],"synonyms":[{"name":"partial duplication of chromosome type X","type":"exact"},{"name":"partial trisomy of chromosome X","type":"exact"}],"termid":"MONDO:0017008","xrefs":{"Monarch":{"xref_id":"0017008"}}}


id: PBO:0030303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_activation_of_monopolar_cell_growth","termid":"PBO:0030303"}


id: PBO:0051527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor antagonist","termid":"PBO:0051527"}


id: PBO:0036354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated WD repeat protein Atg18c","termid":"PBO:0036354"}


id: MONDO:0859363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 79A, autosomal dominant, with ataxia","secondary_identifiers":["DOID:0070455","UMLS:C5774300","MEDGEN:1824073","OMIM:620221"],"termid":"MONDO:0859363","xrefs":{"Monarch":{"xref_id":"0859363"}}}


id: PATO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000497 relative rhythym value (obsolete PATO:0000497)","termid":"PATO:0000497"}


id: GO:0043114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which blood vessels can be pervaded by fluid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular permeability","termid":"GO:0043114"}


id: MONDO:0016931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 10 disorder","termid":"MONDO:0700017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 10","secondary_identifiers":["SCTID:726349006","MEDGEN:1384114","Orphanet:262648","UMLS:C4518498","GARD:20851"],"synonyms":[{"name":"partial trisomy of chromosome 10","type":"exact"}],"termid":"MONDO:0016931","xrefs":{"Monarch":{"xref_id":"0016931"}}}


id: PBO:0031755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromatin_during_vegetative_growth","termid":"PBO:0031755"}


id: MONDO:0054739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Fraser syndrome","termid":"MONDO:0009046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"Fraser syndrome 3","secondary_identifiers":["DOID:0111406","MEDGEN:1621907","UMLS:C4540040","OMIM:617667"],"synonyms":[{"name":"FRASRS3","type":"related"},{"name":"Fraser syndrome 3","type":"exact"}],"termid":"MONDO:0054739","xrefs":{"Monarch":{"xref_id":"0054739"}}}


id: MONDO:0019887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 16q is a rare chromosomal anomaly syndrome, resulting from the partial trisomy of the long arm of chromosome 16, with variable phenotype principally characterized by developmental delay, severe intellectual disability, hypotonia, facial dysmorphism (incl. high, prominent forehead, epicanthic folds, dysplastic ears, broad/depressed nasal bridge, malar hypoplasia, narrow and arched palate, thin upper lip vermilion, micrognathia) and hand/feet anomalies (e.g. arachnodactyly, talipes equinovarus). Cardiac defects, genitourinary malformations and vertebral anomalies are also associated. Thrombocytopenia and recurrent infections have also been reported.","definition_xrefs":["Orphanet:96106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy of the long arm of chromosome 16","termid":"MONDO:0016966"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 16q","secondary_identifiers":["SCTID:764459008","MEDGEN:1633675","UMLS:C4706934","GARD:19320"],"synonyms":[{"name":"distal duplication 16q","type":"exact"},{"name":"distal trisomy type 16q","type":"exact"},{"name":"telomeric duplication 16q","type":"exact"},{"name":"trisomy 16qter","type":"exact"}],"termid":"MONDO:0019887","xrefs":{"Monarch":{"xref_id":"0019887"}}}


id: GO:0031012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure lying external to one or more cells, which provides structural support, biochemical or biomechanical cues for cells or tissues.","definition_xrefs":["PMID:28089324","GOC:BHF","GOC:mah","NIF_Subcellular:nlx_subcell_20090513","GOC:rph","PMID:21123617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extracellular matrix","secondary_identifiers":["GO:0005578","Wikipedia:Extracellular_matrix"],"synonyms":[{"name":"matrisome","type":"narrow"},{"name":"proteinaceous extracellular matrix","type":"exact"}],"termid":"GO:0031012"}


id: PBO:0087019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribose-5-phosphate ketol-isomerase; catalyzes the interconversion of ribose 5-phosphate and ribulose 5-phosphate in the pentose phosphate pathway; participates in pyridoxine biosynthesis","termid":"PBO:0087019"}


id: GO:0102302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + mycinamicin VI = S-adenosyl-L-homocysteine + mycinamicin III(1+) + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"mycinamicin VI 2''-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12801","RHEA:31643"],"termid":"GO:0102302"}


id: MONDO:0021640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of malignant gliomas that includes anaplastic astrocytoma, anaplastic oligodendroglioma, anaplastic oligoastrocytoma, and anaplastic ependymoma.","definition_xrefs":["NCIT:C127816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"grade III glioma","secondary_identifiers":["MEDGEN:925529","UMLS:C4287997"],"synonyms":[{"name":"WHO grade III glioma","type":"exact"},{"name":"anaplastic glioma","type":"exact"}],"termid":"MONDO:0021640","xrefs":{"Monarch":{"xref_id":"0021640"}}}


id: PBO:0086740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; partially overlaps verified gene YAK1/YJL141C but does not share all phenotypes; null mutant displays increased levels of spontaneous Rad52p foci, increased sporulation efficiency, and small defect in vacuolar fragmentation","termid":"PBO:0086740"}


id: FYPO:0002729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the total amount of DNA in a cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered DNA level","termid":"FYPO:0004320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"DNA content increased","synonyms":[{"name":"increased DNA content","type":"exact"},{"name":"increased DNA level","type":"exact"}],"termid":"FYPO:0002729"}


id: GO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic gene regulation mechanism that positively regulates gene expression by demethylation of cytosine residues in chromosomal CpG islands. CpG islands are genomic regions that contain a high frequency of the CG dinucleotide and are often associated with the transcription start site of genes.","definition_xrefs":["PMID:36150101","Wikipedia:Cpg_island"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription initiation-coupled chromatin remodeling","termid":"GO:0045815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325","GO:0006351"],"is_obsolete":false,"name":"positive regulation of gene expression via chromosomal CpG island demethylation","synonyms":[{"name":"DNA demethylation","type":"broad"},{"name":"DNA hypomethylation of CpG island","type":"exact"},{"name":"hypomethylation of CpG island","type":"exact"},{"name":"positive regulation of gene expression via chromosomal CpG dinucleotide demethylation","type":"exact"}],"termid":"GO:0044029"}


id: PBO:0082039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-deoxyglucose-6-phosphate phosphatase; member of a family of low molecular weight phosphatases, induced by oxidative and osmotic stress, confers 2-deoxyglucose resistance when overexpressed; DOG2 has a paralog, DOG1, that arose from a single-locus duplication; the last half of DOG1 and DOG2 are subject to gene conversions among S. cerevisiae, S. paradoxus, and S. mikatae","termid":"PBO:0082039"}


id: PBO:0046603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 5","termid":"PBO:0046603"}


id: MONDO:0016678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete maternal disease-related embryofetopathy (obsolete MONDO:0016678)","secondary_identifiers":["Orphanet:251535"],"termid":"MONDO:0016678","xrefs":{"Monarch":{"xref_id":"0016678"}}}


id: MONDO:0004974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neuroendocrine neoplasm of the sympathetic nervous system that secretes catecholamines. It arises from the chromaffin cells of the adrenal medulla. Clinical presentation includes headaches, palpitations, chest and abdominal pain, hypertension, fever, and tremor. Microscopically, a characteristic nesting (zellballen) growth pattern is usually seen. Other growth patterns including trabecular pattern may also be present.","definition_xrefs":["NCIT:C3326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sympathetic paraganglioma","termid":"MONDO:0021072"},{"relation_name":"is_a","term_name":"adrenal medulla neoplasm","termid":"MONDO:0021237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal gland pheochromocytoma","secondary_identifiers":["MEDGEN:1636437","EFO:0000239","DOID:0050892","ICDO:8700/0","NANDO:2200078","UMLS:C4551683"],"synonyms":[{"name":"Intraadrenal paraganglioma","type":"exact"},{"name":"PCC","type":"exact"},{"name":"adrenal gland Chromaffinoma","type":"exact"},{"name":"adrenal gland chromaffin paraganglioma","type":"exact"},{"name":"adrenal gland paraganglioma","type":"exact"},{"name":"adrenal gland pheochromocytoma","type":"exact"},{"name":"adrenal medullary paraganglioma","type":"exact"},{"name":"adrenal medullary pheochromocytoma","type":"exact"},{"name":"adrenal pheochromocytoma","type":"exact"},{"name":"chromaffin paraganglioma of the adrenal gland","type":"exact"},{"name":"pheochromocytoma","type":"broad"},{"name":"pheochromocytoma (adrenal)","type":"exact"}],"termid":"MONDO:0004974","xrefs":{"Monarch":{"xref_id":"0004974"}}}


id: GO:0042321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the duration or quality of sleep, a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals.","definition_xrefs":["GOC:go_curators","ISBN:0192800981","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of circadian rhythm","termid":"GO:0042754"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, sleep","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, sleep","type":"narrow"},{"name":"negative regulation of sleep","type":"exact"}],"termid":"GO:0042321"}


id: PBO:0068114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 421","termid":"PBO:0068114"}


id: MONDO:0004591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An impetigo that is characterized as a form of severe pustular psoriasis occurring in pregnancy.","definition_xrefs":["DOID:8503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impetigo","termid":"MONDO:0004592"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"impetigo herpetiformis","secondary_identifiers":["SCTID:65539006","UMLS:C1314968","NANDO:1200243","MEDGEN:727290","ICD9:694.3"],"termid":"MONDO:0004591","xrefs":{"Monarch":{"xref_id":"0004591"}}}


id: MONDO:0008381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that is characterized pigmentary retinal degeneration with onset in the teens leading to blindness in the sixth ans seventh decades of life.","definition_xrefs":["DOID:0110420","PMID:3618160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"dominant pericentral pigmentary retinopathy","secondary_identifiers":["MESH:C566713","MEDGEN:357237","UMLS:C1867261","ICD10CM:H35.5","OMIM:180210","GARD:15111"],"synonyms":[{"name":"retinopathy, pericentral pigmentary, dominant","type":"related"}],"termid":"MONDO:0008381","xrefs":{"Monarch":{"xref_id":"0008381"}}}


id: GO:0060330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a response to type II interferon (interferon-gamma). Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"response to type II interferon","termid":"GO:0034341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to type II interferon","synonyms":[{"name":"regulation of response to gamma-interferon","type":"related"},{"name":"regulation of response to immune interferon","type":"exact"},{"name":"regulation of response to interferon-gamma","type":"broad"},{"name":"regulation of response to type II IFN","type":"exact"}],"termid":"GO:0060330"}


id: MONDO:0018767
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85542],"is_not":false,"summary":null,"term":"MONDO:0018767"}]},"cv_name":"mondo","definition":"Any trimethylaminuria in which the cause of the disease is a mutation in the FMO3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"trimethylaminuria","termid":"MONDO:0011182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"severe primary trimethylaminuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5575503","DOID:0080361","MEDGEN:1814174","OMIM:602079","MESH:C536561","GARD:6447","HP:0003614","Orphanet:468726"],"synonyms":[{"name":"TMAU","type":"related"},{"name":"TMAuria","type":"related"},{"name":"fish malodor syndrome","type":"related"},{"name":"fish odor syndrome","type":"related"},{"name":"fish odour syndrome","type":"related"},{"name":"fish-odor syndrome","type":"related"},{"name":"stale fish syndrome","type":"related"},{"name":"trimethylaminuria","type":"broad"}],"termid":"MONDO:0018767","terms_by_termid":{"MONDO:0018767":null},"xrefs":{"Monarch":{"xref_id":"0018767"}}}


id: PBO:0109816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi ceramide transport protein, lipocalin superfamily Svf2","termid":"PBO:0109816"}


id: PBO:0086904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative type-1 protein phosphatase targeting subunit; tethers Glc7p type-1 protein phosphatase to Gsy2p glycogen synthase; PIG2 has a paralog, GIP2, that arose from the whole genome duplication","termid":"PBO:0086904"}


id: GO:1901693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of compound eye retinal cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","PMID:12021768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of compound eye retinal cell apoptotic process","termid":"GO:1901692"},{"relation_name":"negatively_regulates","term_name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye retinal cell apoptotic process","synonyms":[{"name":"down regulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"down-regulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"downregulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"inhibition of compound eye retinal cell apoptotic process","type":"narrow"}],"termid":"GO:1901693"}


id: PR:O13849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cpy1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Y (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.10c","synonyms":[{"name":"CPY (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cpy1","type":"exact"}],"termid":"PR:O13849"}


id: GO:0019302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-ribose, (ribo-pentose).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-ribose metabolic process","termid":"GO:0006014"},{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-ribose biosynthetic process","synonyms":[{"name":"D-ribose anabolism","type":"exact"},{"name":"D-ribose biosynthesis","type":"exact"},{"name":"D-ribose formation","type":"exact"},{"name":"D-ribose synthesis","type":"exact"}],"termid":"GO:0019302"}


id: MONDO:0008217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelvis-shoulder dysplasia is a rare focal skeletal dysostosis characterized by symmetrical hypoplasia of the scapulae and the iliac wings of the pelvis.","definition_xrefs":["Orphanet:2839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"pelvis-shoulder dysplasia","secondary_identifiers":["UMLS:C1868508","MEDGEN:356991","OMIM:169550","GARD:16611","MESH:C566811","SCTID:719298001"],"synonyms":[{"name":"Kosenow syndrome","type":"exact"},{"name":"Scapuloiliac dysostosis","type":"exact"},{"name":"pelvis-shoulder dysplasia","type":"exact"}],"termid":"MONDO:0008217","xrefs":{"Monarch":{"xref_id":"0008217"}}}


id: MONDO:0013079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary biliary cholangitis","termid":"MONDO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"primary biliary cholangitis 2","secondary_identifiers":["GARD:15601","MESH:C567817","OMIM:613007","MEDGEN:442791","DOID:0070359","UMLS:C2751696"],"synonyms":[{"name":"PBC2","type":"related"},{"name":"biliary cirrhosis, primary, 2","type":"related"}],"termid":"MONDO:0013079","xrefs":{"Monarch":{"xref_id":"0013079"}}}


id: PBO:0061450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NR4A1 antisense RNA","termid":"PBO:0061450"}


id: PBO:0034479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_synthase_(NADH)_activity","termid":"PBO:0034479"}


id: GO:0002847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immune response to tumor cell","termid":"GO:0002841"},{"relation_name":"is_a","term_name":"negative regulation of tolerance induction to tumor cell","termid":"GO:0002844"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction to tumor cell","termid":"GO:0002846"},{"relation_name":"is_a","term_name":"negative regulation of peripheral T cell tolerance induction","termid":"GO:0002850"},{"relation_name":"negatively_regulates","term_name":"T cell tolerance induction to tumor cell","termid":"GO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell tolerance induction to tumor cell","synonyms":[{"name":"down regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"down-regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"downregulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"inhibition of T cell tolerance induction to tumor cell","type":"narrow"}],"termid":"GO:0002847"}


id: PR:O60187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sid4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation initiation protein sid4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC244.01c","synonyms":[{"name":"Spom972h-sid4","type":"exact"}],"termid":"PR:O60187"}


id: PBO:0065612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 6","termid":"PBO:0065612"}


id: GO:0002554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a platelet or group of platelets.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion involved in inflammatory response","termid":"GO:0002442"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"platelet degranulation","termid":"GO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"serotonin secretion by platelet","synonyms":[{"name":"serotonin release by platelet","type":"related"}],"termid":"GO:0002554"}


id: MONDO:0017135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Olivopontocerebellar atrophy-deafness syndrome is characterized by infancy-onset olivopontocerebellar atrophy, sensorineural deafness and speech impairment. It has been described in less than 15 children. Most cases were sporadic, but autosomal recessive inheritance was suggested in three cases.","definition_xrefs":["Orphanet:2732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olivopontocerebellar atrophy-deafness syndrome","secondary_identifiers":["MEDGEN:905095","UMLS:C4275113","GARD:4070"],"synonyms":[{"name":"olivopontocerebellar atrophy deafness","type":"related"}],"termid":"MONDO:0017135","xrefs":{"Monarch":{"xref_id":"0017135"}}}


id: PR:O94258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exportin-T that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03793","PANTHER:PTHR15952:SF11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin-T (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.09c","secondary_identifiers":["UniProtKB:O94258"],"synonyms":[{"name":"Spom972h-XPOT","type":"exact"},{"name":"exportin(tRNA) (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA exportin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94258"}


id: MONDO:0009198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare skin disorder characterized by erythrodermic, peeling skin from birth with no obvious nail or hair-shaft abnormalities and other associated anomalies including diarrhea, failure to thrive and severe hypoalbuminaemia resistant to correction by enteral or intravenous supplementation. An autosomal recessive mode of inheritance is highly probable. The prognosis is poor and infants die in the first months of life. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:1954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"congenital lethal erythroderma","secondary_identifiers":["MEDGEN:384008","MESH:C535513","OMIM:227090","UMLS:C1856898","GARD:2192","SCTID:722391005"],"synonyms":[{"name":"congenital exfoliative erythroderma resistant to treatment","type":"related"},{"name":"erythroderma lethal congenital","type":"related"},{"name":"erythroderma, lethal congenital","type":"related"},{"name":"lethal congenital erythroderma","type":"related"}],"termid":"MONDO:0009198","xrefs":{"Monarch":{"xref_id":"0009198"}}}


id: PBO:0069795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1081, pseudogene","termid":"PBO:0069795"}


id: PBO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein Dni1","termid":"PBO:0001828"}


id: PBO:0058079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4297","termid":"PBO:0058079"}


id: PBO:0076447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 3","termid":"PBO:0076447"}


id: PBO:0078656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 9-1","termid":"PBO:0078656"}


id: PBO:0087486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cohesin loading factor (Scc2p-Scc4p); complex is required for the loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during double-strand break repair via phosphorylated histone H2AX","termid":"PBO:0087486"}


id: MONDO:0100169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"polyneuropathy, inflammatory demyelinating, chronic","synonyms":[{"name":"CIDP","type":"exact"}],"termid":"MONDO:0100169","xrefs":{"Monarch":{"xref_id":"0100169"}}}


id: PBO:0031672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_secretion","termid":"PBO:0031672"}


id: PBO:0034702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Gup1 (predicted)","termid":"PBO:0034702"}


id: GO:0044642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation via the alternative pathway in the bitten/stung organism.","definition_xrefs":["GOC:fj","PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation, alternative pathway in another organism (obsolete GO:0044642)","synonyms":[{"name":"envenomation resulting in modulation of complement activation, alternative pathway in other organism","type":"exact"},{"name":"envenomation resulting in regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044642"}


id: MONDO:0020144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebrovascular dementia (obsolete MONDO:0020144)","secondary_identifiers":["Orphanet:98549"],"synonyms":[{"name":"rare cerebrovascular dementia","type":"related"}],"termid":"MONDO:0020144","xrefs":{"Monarch":{"xref_id":"0020144"}}}


id: MOD:00100
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to L-leucine amide.","definition_xrefs":["PubMed:2578459","RESID:AA0091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-leucine amide","synonyms":[{"name":"(2S)-2-amino-4-methylpentanamide","type":"exact"},{"name":"2-amino-4-methylvaleramide","type":"exact"},{"name":"2-azanyl-4-methylpentanamide","type":"exact"},{"name":"L-leucine amide","type":"exact"},{"name":"LeuN","type":"exact"},{"name":"MOD_RES Leucine amide","type":"exact"},{"name":"alpha-aminoisocaproamide","type":"exact"},{"name":"amidated L-leucine","type":"exact"},{"name":"leucinamide","type":"exact"}],"termid":"MOD:00100"}


id: MONDO:0015441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 7 syndrome is a rare chromosomal anomaly syndrome, with highly variable phenotype, principally characterized by growth failure, short stature, intellectual disability, dermatological abnormalities (nevus flammeus, dark pigmented nevi, café-au-lait spots), microcephaly and facial dysmorphism (incl. facial asymmetry, small ears, abnormal palpebral fissures, ptosis, epicanthic folds, hyper/hypotelorism). Additional reported features include convulsions, cleft lip and palate, clinodactyly, kyphoscoliosis and genital anomalies (i.e. cryptorchidism, hypospadias, micropenis).","definition_xrefs":["Orphanet:1449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 7 disorder","termid":"MONDO:0700014"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 7","secondary_identifiers":["MEDGEN:419454","UMLS:C2931622","GARD:1345","MESH:C537813","NCIT:C121986","SCTID:765489006"],"synonyms":[{"name":"R7","type":"related"},{"name":"Ring 7","type":"related"},{"name":"Ring chromosome 7 syndrome","type":"related"},{"name":"Ring chromosome type 7","type":"exact"},{"name":"chromosome 7 ring","type":"related"},{"name":"rose cluster 7","type":"exact"}],"termid":"MONDO:0015441","xrefs":{"Monarch":{"xref_id":"0015441"}}}


id: PBO:0044871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 3","termid":"PBO:0044871"}


id: GO:2001058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a D-tagatose 6-phosphate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-tagatose 6-phosphate metabolic process","synonyms":[{"name":"D-tagatose 6-phosphate metabolism","type":"exact"}],"termid":"GO:2001058"}


id: GO:2000652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary cell wall biogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"regulates","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"regulation of secondary cell wall biogenesis","synonyms":[{"name":"regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"regulation of secondary cell wall anabolism","type":"related"},{"name":"regulation of secondary cell wall biosynthetic process","type":"related"},{"name":"regulation of secondary cell wall formation","type":"related"},{"name":"regulation of secondary cell wall synthesis","type":"related"}],"termid":"GO:2000652"}


id: PBO:0066908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 209","termid":"PBO:0066908"}


id: PBO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endodeoxyribonuclease Pnu1","termid":"PBO:0002543"}


id: GO:0102541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-D-galactose 6-phosphate = beta-D-galactose 6-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete D-galactose 6-phosphate 1-epimerase activity (obsolete GO:0102541)","termid":"GO:0102541"}


id: FYPO:0003504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the plasma membrane is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"},{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"},{"relation_name":"is_a","term_name":"altered level of substance in plasma membrane","termid":"FYPO:0008331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level in plasma membrane","synonyms":[{"name":"increased plasma membrane protein level during vegetative growth","type":"exact"},{"name":"increased protein level in cell membrane during vegetative growth","type":"exact"},{"name":"increased protein level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"increased protein level in plasma membrane during vegetative growth","type":"exact"},{"name":"protein accumulation in plasma membrane","type":"exact"}],"termid":"FYPO:0003504"}


id: FYPO:0002902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during vegetative growth","synonyms":[{"name":"decreased protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"decreased protein localization to kinetochore during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to kinetochore during vegetative growth","type":"exact"}],"termid":"FYPO:0002902"}


id: PBO:0076856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TET2 antisense RNA 1","termid":"PBO:0076856"}


id: GO:0070584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of a mitochondrion are generated and organized.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrion morphogenesis (obsolete GO:0070584)","termid":"GO:0070584"}


id: GO:0036434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethylnitronate + FMNH(2) + O2 = acetaldehyde + FMN + H2O + H+ + nitrite.","definition_xrefs":["RHEA:26458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitronate monooxygenase (FMN-linked) activity","secondary_identifiers":["KEGG_REACTION:R00025"],"termid":"GO:0036434"}


id: SO:1000058
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA point mutation that causes a substitution of an amino acid by an other.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000058 sequence_variant_causing_non_synonymous_codon_change_in_transcript (obsolete SO:1000058)","synonyms":[{"name":"mutation causing non synonymous codon change in transcript","type":"related"},{"name":"non-synonymous codon change in transcript","type":"exact"},{"name":"sequence variant causing non synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000058"}


id: GO:0061031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the endodermal digestive tract are generated and organized. The endodermal digestive tract includes those portions of the digestive tract that are derived from endoderm.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive tract morphogenesis","termid":"GO:0048546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal digestive tract morphogenesis","termid":"GO:0061031"}


id: PBO:0031758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_centromere","termid":"PBO:0031758"}


id: PBO:0075790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 10 pseudogene 1","termid":"PBO:0075790"}


id: GO:0004728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.","definition_xrefs":["EC:3.1.3.48"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer, downstream of receptor, with protein tyrosine phosphatase activity (obsolete GO:0004728)","synonyms":[{"name":"receptor signaling protein tyrosine phosphatase activity","type":"exact"},{"name":"receptor signalling protein tyrosine phosphatase activity","type":"exact"}],"termid":"GO:0004728"}


id: GO:1903336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vacuolar transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"negatively_regulates","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of vacuolar transport","synonyms":[{"name":"down regulation of vacuolar transport","type":"exact"},{"name":"down-regulation of vacuolar transport","type":"exact"},{"name":"downregulation of vacuolar transport","type":"exact"},{"name":"inhibition of vacuolar transport","type":"narrow"}],"termid":"GO:1903336"}


id: PBO:0051918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGB2 antisense RNA 1","termid":"PBO:0051918"}


id: FYPO:0003305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which polar microtubules fail to interdigitate properly, and two partially or completely separated microtubule structures, usually V-shaped, each corresponding to one half of the spindle, are present.","definition_xrefs":["PomBase:mah","PMID:9348288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"output_of","term_name":"abnormal mitotic spindle midzone assembly","termid":"FYPO:0003304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000337","FYPO:0000054","FYPO:0000631","FYPO:0000120","FYPO:0005447","FYPO:0000641","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"separate mitotic half spindles present","synonyms":[{"name":"broken spindle interzone","type":"related"},{"name":"broken spindle midzone","type":"related"},{"name":"loss of interdigitation between mitotic half spindles","type":"exact"},{"name":"separate half spindles present during mitosis","type":"exact"},{"name":"separate half spindles present during mitotic cell cycle","type":"related"},{"name":"separate mitotic half spindles present during vegetative growth","type":"exact"},{"name":"spindle fraying","type":"related"}],"termid":"FYPO:0003305"}


id: PBO:0030365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_vegetative_cell,_septa_grouped","termid":"PBO:0030365"}


id: MONDO:0005552
data:
  {"annotated_genes":["SJAG_00495","SJAG_02063","SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[86453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010557"},{"annotations":[85981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[86589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"}]},"cv_name":"mondo","definition":"A disorder that is caused by pathologic changes in the ocular vasculature.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_02063":null,"SJAG_02286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular vascular disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0948522","EFO:0005753","NCIT:C35664","MEDGEN:182689"],"synonyms":[{"name":"disease of vasculature of eye","type":"exact"},{"name":"disease or disorder of vasculature of eye","type":"exact"},{"name":"disorder of vasculature of eye","type":"exact"},{"name":"ocular vascular disorder","type":"exact"},{"name":"vasculature of eye disease","type":"exact"},{"name":"vasculature of eye disease or disorder","type":"exact"}],"termid":"MONDO:0005552","terms_by_termid":{"MONDO:0009796":null,"MONDO:0010557":null,"MONDO:0013644":null,"MONDO:0013805":null},"xrefs":{"Monarch":{"xref_id":"0005552"}}}


id: GO:0102058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-leucine + ATP(4-) + a jasmonic acid = AMP(2-) + diphosphoric acid + a jasmonoyl-leucine.","definition_xrefs":["GOC:pz","PMID:17291501"],"gene_count":0,"genotype_count":0,"name":"obsolete jasmonoyl-leucine synthetase activity (obsolete GO:0102058)","termid":"GO:0102058"}


id: MONDO:0000076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuropathy, hereditary sensory and autonomic (obsolete MONDO:0000076)","termid":"MONDO:0000076","xrefs":{"Monarch":{"xref_id":"0000076"}}}


id: PBO:0043021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 1A","termid":"PBO:0043021"}


id: GO:1903092
data:
  {"annotated_genes":["SJAG_02962","SJAG_03808","SJAG_02152","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89654,89655,116913,118186],"is_not":false,"summary":null,"term":"GO:1903092"}]},"cv_name":"biological_process","definition":"The process in which pyridoxine is transported across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:15701794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine transport","termid":"GO:0031923"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"pyridoxine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903092","terms_by_termid":{"GO:1903092":null}}


id: PBO:0029443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_abnormal_cell_morphology_(obsolete_FYPO:0002272)","termid":"PBO:0029443"}


id: GO:0070943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a symbiont target cell by a neutrophil. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing by host of symbiont cells","termid":"GO:0051873"},{"relation_name":"is_a","term_name":"neutrophil mediated cytotoxicity","termid":"GO:0070942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of symbiont cell","synonyms":[{"name":"neutrophil mediated killing of symbiont cell","type":"exact"}],"termid":"GO:0070943"}


id: MONDO:0015159
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id: GO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by cells expressing specific receptors for antigens produced through a somatic diversification process, and allowing for an enhanced secondary response to subsequent exposures to the same antigen (immunological memory).","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune response","secondary_identifiers":["Wikipedia:Adaptive_immune_system","Reactome:R-HSA-1280218"],"synonyms":[{"name":"acquired immune response","type":"exact"},{"name":"immune memory response","type":"exact"}],"termid":"GO:0002250"}


id: PBO:0076418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9b pseudogene 1","termid":"PBO:0076418"}


id: MONDO:0001092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed benign smooth muscle neoplasm arising from the colon. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C5492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign colon neoplasm","termid":"MONDO:0002278"},{"relation_name":"is_a","term_name":"colorectal leiomyoma","termid":"MONDO:0003299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colon leiomyoma","secondary_identifiers":["UMLS:C1333092","DOID:10656","MEDGEN:232379"],"synonyms":[{"name":"colon leiomyoma","type":"exact"},{"name":"colonic leiomyoma","type":"exact"},{"name":"leiomyoma of colon","type":"exact"},{"name":"leiomyoma of the colon","type":"exact"}],"termid":"MONDO:0001092","xrefs":{"Monarch":{"xref_id":"0001092"}}}


id: PR:Q92373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication protein A 32 kDa subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13989:SF7","PRO:DNx","OMA:SCHPO04720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor A protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1753.01c","secondary_identifiers":["UniProtKB:Q92373"],"synonyms":[{"name":"Spom972h-RPA2","type":"exact"},{"name":"single-stranded DNA-binding protein P30 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92373"}


id: PBO:0050628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 2 binding protein","termid":"PBO:0050628"}


id: SO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytologically observable heterochromatic regions of chromosomes away from centromeres that contain predominatly large tandem repeats and retrotransposons.","definition_xrefs":["PMID:6439888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"knob","synonyms":[{"name":"Heterochromatin Knob","type":"exact"}],"termid":"SO:0002257"}


id: PR:Q9P7E3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SAM decarboxylase proenzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03455","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine decarboxylase proenzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.05c","secondary_identifiers":["UniProtKB:Q9P7E3"],"synonyms":[{"name":"AdoMetDC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SAMDC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AMD1","type":"exact"}],"termid":"PR:Q9P7E3"}


id: PBO:0011456
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli alkA/tag","termid":"PBO:0011456"}


id: GO:0043306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mast cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of mast cell degranulation","termid":"GO:0043304"},{"relation_name":"positively_regulates","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of mast cell degranulation","synonyms":[{"name":"activation of mast cell degranulation","type":"narrow"},{"name":"positive regulation of mast cell granule exocytosis","type":"exact"},{"name":"stimulation of mast cell degranulation","type":"narrow"},{"name":"up regulation of mast cell degranulation","type":"exact"},{"name":"up-regulation of mast cell degranulation","type":"exact"},{"name":"upregulation of mast cell degranulation","type":"exact"}],"termid":"GO:0043306"}


id: MONDO:0015826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spondylocostal dysostosis is a very rare and mild form of spondylocostal dysostosis characterized by vertebral and costal segmentation defects, often with a reduction in the number of ribs.","definition_xrefs":["Orphanet:1797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylocostal dysostosis","termid":"MONDO:0000359"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"autosomal dominant spondylocostal dysostosis","secondary_identifiers":["GARD:12806","MEDGEN:902919","SCTID:716232002","UMLS:C4274761"],"synonyms":[{"name":"autosomal dominant spondylocostal dysplasia","type":"exact"},{"name":"spondylocostal dysostosis, autosomal dominant","type":"exact"}],"termid":"MONDO:0015826","xrefs":{"Monarch":{"xref_id":"0015826"}}}


id: GO:0110137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of imaginal disc-derived leg joint morphogenesis, the process in which the anatomical structure of the imaginal disc-derived leg joint is generated and organized.","definition_xrefs":["PMID:25329825","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"imaginal disc-derived leg morphogenesis","termid":"GO:0007480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc-derived leg joint morphogenesis","termid":"GO:0110137"}


id: PBO:0010259
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by D. melanogaster HMT1(CG4225)","termid":"PBO:0010259"}


id: GO:1900216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in metanephric collecting duct development.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","PMID:17314325","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in metanephric collecting duct development","termid":"GO:1900214"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in metanephric collecting duct development","termid":"GO:1900204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"activation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"activation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"activation of apoptotic process involved in metanephric collecting duct development","type":"narrow"},{"name":"activation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"activation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"activation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"activation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"activation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"activation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"positive regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"positive regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"positive regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"positive regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"up regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"up regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"up regulation of apoptotic process involved in metanephric collecting duct development","type":"exact"},{"name":"up regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"up regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"up regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"up regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"up regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"up regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"up-regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"up-regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of apoptotic process involved in metanephric collecting duct development","type":"exact"},{"name":"up-regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"up-regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"up-regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"upregulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"upregulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"upregulation of apoptotic process involved in metanephric collecting duct development","type":"exact"},{"name":"upregulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"upregulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"upregulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"upregulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"upregulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"upregulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900216"}


