# terms

id: PBO:0070196
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 120 pseudogene","termid":"PBO:0070196"}


id: GO:0032920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of putrescine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine acetylation","termid":"GO:0032920"}


id: GO:0098876
data:
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id: PBO:0040870
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMI1 proto-oncogene, polycomb ring finger","termid":"PBO:0040870"}


id: PBO:0058124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4426","termid":"PBO:0058124"}


id: PBO:0030679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_size","termid":"PBO:0030679"}


id: PBO:0066993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 296","termid":"PBO:0066993"}


id: GO:0005251
data:
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id: MONDO:0003500
data:
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id: GO:0021891
data:
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id: GO:0046439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:jsg","GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-cysteine metabolic process","synonyms":[{"name":"L-cysteine metabolism","type":"exact"}],"termid":"GO:0046439"}


id: MONDO:0012448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the ZFYVE27 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 33","secondary_identifiers":["MEDGEN:339943","UMLS:C1853251","DOID:0110784","MESH:C565214","OMIM:610244"],"synonyms":[{"name":"SPG33","type":"exact"},{"name":"ZFYVE27 hereditary spastic paraplegia","type":"exact"},{"name":"autosomal dominant spastic paraplegia 33","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in ZFYVE27","type":"exact"},{"name":"hereditary spastic paraplegia type 33","type":"exact"},{"name":"spastic paraplegia 33, autosomal dominant","type":"related"}],"termid":"MONDO:0012448","xrefs":{"Monarch":{"xref_id":"0012448"}}}


id: PBO:0069808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1094, pseudogene","termid":"PBO:0069808"}


id: MONDO:0850445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peritoneal benign neoplasm that is characterized by the presence of prominent hemangiopericytoma-like vessels.","definition_xrefs":["DOID:0081026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal benign neoplasm","termid":"MONDO:0000650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign peritoneal solitary fibrous tumor","termid":"MONDO:0850445","xrefs":{"Monarch":{"xref_id":"0850445"}}}


id: PBO:0081506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 410","termid":"PBO:0081506"}


id: PBO:0055229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2655","termid":"PBO:0055229"}


id: GO:0016491
data:
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id: FYPO:0006576
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id: PATO:0000934
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000934 u v light sensitivity (obsolete PATO:0000934)","termid":"PATO:0000934"}


id: GO:0018327
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-histidine to form 1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine).","definition_xrefs":["RESID:AA0035"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 1'-phospho-L-histidine (obsolete GO:0018327)","termid":"GO:0018327"}


id: MOD:01013
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetramethylguanidinium termination by-product on amine","termid":"MOD:01013"}


id: GO:1902812
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["PMID:10499580","GO_REF:0000058","GOC:TermGenie","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1902812)","synonyms":[{"name":"regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1902812"}


id: MONDO:0013362
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id: GO:0051346
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrolase activity","synonyms":[{"name":"down regulation of hydrolase activity","type":"exact"},{"name":"down-regulation of hydrolase activity","type":"exact"},{"name":"downregulation of hydrolase activity","type":"exact"},{"name":"hydrolase inhibitor","type":"exact"},{"name":"inhibition of hydrolase activity","type":"narrow"}],"termid":"GO:0051346"}


id: GO:0042557
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme eukaryotic elongation factor-2 kinase.","definition_xrefs":["PMID:11904175","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic elongation factor-2 kinase regulator activity","termid":"GO:0042556"},{"relation_name":"is_a","term_name":"protein serine/threonine kinase activator activity","termid":"GO:0043539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"eukaryotic elongation factor-2 kinase activator activity","synonyms":[{"name":"eEF-2 kinase activator","type":"exact"}],"termid":"GO:0042557"}


id: MONDO:0020472
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Turner syndrome","termid":"MONDO:0019499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"Turner syndrome due to structural X chromosome anomalies","secondary_identifiers":["UMLS:C5681631","Orphanet:99413","GARD:19681","MEDGEN:1842425"],"termid":"MONDO:0020472","xrefs":{"Monarch":{"xref_id":"0020472"}}}


id: GO:0017161
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-myo-inositol 1,3,4-trisphosphate + H2O = myo-inositol 1,3-bisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"inositol-1,3,4-trisphosphate 4-phosphatase activity","secondary_identifiers":["RHEA:43392","Reactome:R-HSA-1855180"],"termid":"GO:0017161"}


id: GO:0046301
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-N-isopropylacetanilide biosynthetic process (obsolete GO:0046301)","synonyms":[{"name":"2-chloro-N-isopropylacetanilide anabolism","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthesis","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthetic process","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide formation","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide synthesis","type":"exact"}],"termid":"GO:0046301"}


id: PBO:0028152
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_multinucleate_aseptate_cell","termid":"PBO:0028152"}


id: GO:0060526
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the prostate glandular acini are generated and organized. The glandular acini are the saclike structures of the gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate gland epithelium morphogenesis","termid":"GO:0060740"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate glandular acinus morphogenesis","termid":"GO:0060526"}


id: MONDO:0001004
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumoconiosis caused by exposure to slate dust.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slate pneumoconiosis","secondary_identifiers":["NCIT:C35397","SCTID:1259003","MEDGEN:83300","DOID:10330","UMLS:C0340186","ICD9:502"],"synonyms":[{"name":"Schistosis","type":"exact"}],"termid":"MONDO:0001004","xrefs":{"Monarch":{"xref_id":"0001004"}}}


id: MONDO:0005754
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A generalized tonic-clonic seizure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adolescence-adult electroclinical syndrome","termid":"MONDO:0000415"},{"relation_name":"is_a","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"adolescent/adult-onset epilepsy syndrome","termid":"MONDO:0100030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy with generalized tonic-clonic seizures","secondary_identifiers":["DOID:7725","NCIT:C3022","SCTID:352818000","ICD9:345.10","EFO:0007262","MESH:D004830","UMLS:C0014549","MEDGEN:4987"],"synonyms":[{"name":"epileptic seizures, tonic-clonic","type":"exact"},{"name":"grand Mal epilepsy","type":"exact"},{"name":"tonic-clonic epilepsy","type":"exact"}],"termid":"MONDO:0005754","xrefs":{"Monarch":{"xref_id":"0005754"}}}


id: PBO:0061419
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide Y receptor Y4","termid":"PBO:0061419"}


id: PBO:0039136
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune regulator","termid":"PBO:0039136"}


id: PBO:0113184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-binding ER tricalbin involved in ER-plasma membrane tethering; one of at least 7 proteins (Ice2p, Ist2p, Scs2/Scs22p, Tcb1-Tcb3p) that affect cER tethering and contact with the plasma membrane (PM); regulates PI4P levels by controlling access of the Sac1p phosphatase to its substrate PI4P in the PM; regulates PM phospholipid homeostasis; contains 3 calcium and lipid binding domains; localizes to the cortical ER and to mitochondria; C-termini of Tcb1p, Tcb2p and Tcb3p interact","termid":"PBO:0113184"}


id: GO:0003820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete class I major histocompatibility complex antigen (obsolete GO:0003820)","synonyms":[{"name":"class I major histocompatibility complex antigen","type":"exact"}],"termid":"GO:0003820"}


id: FYPO:0008225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphate (Pi) measured in a cell (total or free) is higher than normal.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular phosphate (Pi) level","termid":"FYPO:0008225"}


id: PBO:0068178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 485","termid":"PBO:0068178"}


id: GO:1903837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:als","PMID:19575011"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA 3'-UTR binding (obsolete GO:1903837)","synonyms":[{"name":"regulation of mRNA 3' UTR binding","type":"exact"}],"termid":"GO:1903837"}


id: GO:0004972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A cation channel that opens in response to binding by extracellular glutmate, but only if glycine or D-serine is also bound and the membrane is depolarized. Voltage gating is indirect, due to ejection of bound magnesium from the pore at permissive voltages.","definition_xrefs":["PMID:7790891","PMID:10049997","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate-gated receptor activity","termid":"GO:0004970"},{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857","GO:0038023"],"is_obsolete":false,"name":"NMDA glutamate receptor activity","secondary_identifiers":["Wikipedia:NMDA_receptor"],"synonyms":[{"name":"N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"},{"name":"NMDA receptor","type":"exact"}],"termid":"GO:0004972"}


id: MONDO:0010863
data:
  {"annotated_genes":["SJAG_03843"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86877],"is_not":false,"summary":null,"term":"MONDO:0010863"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus in which the cause of the disease is a mutation in the SUMO4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03843":null},"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C563958","OMIM:600320","DOID:0110744","MEDGEN:325371","UMLS:C1838260"],"synonyms":[{"name":"IDDM5","type":"exact"},{"name":"SUMO4 type 1 diabetes mellitus","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 5","type":"related"},{"name":"diabetes mellitus, insulin-dependent, type 5","type":"exact"},{"name":"insulin-dependent diabetes mellitus 5","type":"exact"},{"name":"type 1 diabetes mellitus caused by mutation in SUMO4","type":"exact"}],"termid":"MONDO:0010863","terms_by_termid":{"MONDO:0010863":null},"xrefs":{"Monarch":{"xref_id":"0010863"}}}


id: PBO:0027857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology_during_prophase_I","termid":"PBO:0027857"}


id: GO:1901749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of leukotriene D4.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene catabolic process","termid":"GO:0036100"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"},{"relation_name":"is_a","term_name":"leukotriene D4 metabolic process","termid":"GO:1901748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044248","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"leukotriene D4 catabolic process","synonyms":[{"name":"leukotriene D4 breakdown","type":"exact"},{"name":"leukotriene D4 catabolism","type":"exact"},{"name":"leukotriene D4 degradation","type":"exact"}],"termid":"GO:1901749"}


id: MONDO:0001655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pathologic nystagmus","termid":"MONDO:0004843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissociated nystagmus","secondary_identifiers":["icd11.foundation:50035755","MEDGEN:56362","UMLS:C0155380","DOID:13174","ICD9:379.55","SCTID:9520006","ICD10CM:H55.04"],"synonyms":[{"name":"dissociated nystagmus","type":"exact"}],"termid":"MONDO:0001655","xrefs":{"Monarch":{"xref_id":"0001655"}}}


id: PBO:0060119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 20","termid":"PBO:0060119"}


id: MOD:01634
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-aspartic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid removal","termid":"MOD:01634"}


id: PBO:0042730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein I","termid":"PBO:0042730"}


id: PBO:0075756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine racemase","termid":"PBO:0075756"}


id: PBO:0067753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 52","termid":"PBO:0067753"}


id: GO:0106409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',3'-c-di-AMP + H2O = 5'-O-phosphonoadenylyl-(3'-5')-adenosine + H+.","definition_xrefs":["RHEA:54420","PMID:21909268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"cyclic-di-AMP phosphodiesterase activity","secondary_identifiers":["MetaCyc:RXN-19814","EC:3.1.4.59"],"termid":"GO:0106409"}


id: MONDO:0020289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tricuspid valve disorder","termid":"MONDO:0000471"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital tricuspid malformation","secondary_identifiers":["Orphanet:98721","GARD:19555","HP:0001702","MEDGEN:1842501","UMLS:C5681691"],"termid":"MONDO:0020289","xrefs":{"Monarch":{"xref_id":"0020289"}}}


id: MONDO:0010603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A","termid":"MONDO:0010602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemophilia A with vascular abnormality","secondary_identifiers":["MESH:C564415","UMLS:C1844137","OMIM:306800","MEDGEN:336105"],"synonyms":[{"name":"hemophilia A with vascular abnormality","type":"exact"}],"termid":"MONDO:0010603","xrefs":{"Monarch":{"xref_id":"0010603"}}}


id: PBO:0086714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant is deficient in cell wall mannosylphosphate and has long chronological lifespan; genetic interactions suggest a role in ER-associated protein degradation (ERAD); SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0086714"}


id: PBO:0034245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_assembly_of","termid":"PBO:0034245"}


id: MONDO:0002079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuroendocrine tumor (obsolete MONDO:0002079)","termid":"MONDO:0002079","xrefs":{"Monarch":{"xref_id":"0002079"}}}


id: GO:0180024
data:
  {"annotated_genes":["SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103220],"is_not":false,"summary":null,"term":"GO:0180024"}]},"cv_name":"molecular_function","definition":"An activity in which a protein, or group of proteins, acts to restrict the size of a fenestration in a membrane or membrane system (i.e. restrict the diameter of a hole in a membrane). An example of this is the molecular function is performed by ESCRT-III proteins at the nuclear envelope of fission yeast during anaphase B.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"membrane grommet activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180024","terms_by_termid":{"GO:0180024":null}}


id: PBO:0030207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell","termid":"PBO:0030207"}


id: PBO:0113258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Permease of basic amino acids in vacuolar membrane; targeted to vacuole via AP-3 pathway","termid":"PBO:0113258"}


id: GO:1902564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil activation.","definition_xrefs":["PMID:17588661","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of neutrophil activation","termid":"GO:1902563"},{"relation_name":"negatively_regulates","term_name":"neutrophil activation","termid":"GO:0042119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil activation","synonyms":[{"name":"down regulation of neutrophil activation","type":"exact"},{"name":"down-regulation of neutrophil activation","type":"exact"},{"name":"downregulation of neutrophil activation","type":"exact"},{"name":"inhibition of neutrophil activation","type":"narrow"}],"termid":"GO:1902564"}


id: GO:0039718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic viral factory that consists of a double-membrane bound vesicle. Has a diameter of 200-300nm and is derived from the endoplasmic reticulum or Golgi apparatus. Produced by Picornaviridae, Nidovirales, Arteriviridae and Coronaviridae.","definition_xrefs":["PMID:22440839","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory","synonyms":[{"name":"DMV viral factory","type":"exact"}],"termid":"GO:0039718"}


id: PBO:0066598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q pseudogene 1","termid":"PBO:0066598"}


id: PR:O60104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med7 gene.","definition_xrefs":["UniProtKB:O60104","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.08","synonyms":[{"name":"Spom972h-med7","type":"exact"},{"name":"mediator complex subunit 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60104"}


id: PBO:0029865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_spheroid_vegetative_cell_population_(obsolete_FYPO:0002372)","termid":"PBO:0029865"}


id: PBO:0042703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF2 divergent transript","termid":"PBO:0042703"}


id: PBO:0082192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldehyde reductase; substrates include both aromatic and aliphatic aldehydes; uses NADPH as cofactor; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0082192"}


id: PBO:0053756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 997","termid":"PBO:0053756"}


id: GO:1904203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iodide transport.","definition_xrefs":["GOC:TermGenie","PMID:20392814","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monoatomic anion transport","termid":"GO:1903793"},{"relation_name":"is_a","term_name":"regulation of iodide transport","termid":"GO:1904201"},{"relation_name":"positively_regulates","term_name":"iodide transport","termid":"GO:0015705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of iodide transport","synonyms":[{"name":"activation of iodide transport","type":"narrow"},{"name":"up regulation of iodide transport","type":"exact"},{"name":"up-regulation of iodide transport","type":"exact"},{"name":"upregulation of iodide transport","type":"exact"}],"termid":"GO:1904203"}


id: PBO:0076755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 5","termid":"PBO:0076755"}


id: GO:0140732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of production of amphiregulin.","definition_xrefs":["PMID:24463227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of amphiregulin production","termid":"GO:0140731"},{"relation_name":"positively_regulates","term_name":"amphiregulin production","termid":"GO:0140730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of amphiregulin production","synonyms":[{"name":"positive regulation of AREG production","type":"broad"}],"termid":"GO:0140732"}


id: PBO:0028557
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_astral_microtubule_during_mitosis","termid":"PBO:0028557"}


id: RO:0002229
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of ends with","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends","termid":"RO:0002229"}


id: GO:0003412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an epithelial cell that contributes to the shaping of a camera-type eye.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis","termid":"GO:0003412"}


id: PBO:0026960
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_localization","termid":"PBO:0026960"}


id: MONDO:0016071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile hyaline fibromatosis (JHF) is a rare soft tissue tumor, characterized by papulo-nodular skin lesions (especially around the head and neck), soft tissue masses, gingival hypertrophy, joint contractures, and osteolytic bone lesions in variable degrees. Joint contractures may cripple patients and delay normal motor development if occurring in infancy. Severe gingival hyperplasia can interfere with eating and delay dentition. Histopathology analysis of involved tissues reveals cords of spindle-shaped cells embedded in an amorphous, hyaline material. JHF is a mild form of infantile systemic hyalinosis.","definition_xrefs":["Orphanet:2028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"},{"relation_name":"is_a","term_name":"hyaline fibromatosis syndrome","termid":"MONDO:0009229"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"juvenile hyaline fibromatosis","secondary_identifiers":["SCTID:238861002","MEDGEN:411197","ICD9:733.29","UMLS:C2745948","GARD:16583","NCIT:C98297","icd11.foundation:1890146024"],"synonyms":[{"name":"Molluscum fibrosum","type":"exact"},{"name":"Murray-Puretic-Drescher syndrome","type":"exact"},{"name":"Puretic syndrome","type":"exact"},{"name":"mesenchymal dysplasia","type":"exact"}],"termid":"MONDO:0016071","xrefs":{"Monarch":{"xref_id":"0016071"}}}


id: FYPO:0006965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of HMG-CoA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular HMG-CoA level","synonyms":[{"name":"increased HMG-CoA accumulation","type":"related"},{"name":"increased cellular 3-hydroxy-3-methylglutaryl-CoA level","type":"exact"},{"name":"increased cellular HMG-CoA level during mitotic cell cycle","type":"related"},{"name":"increased cellular HMG-CoA level during vegetative growth","type":"exact"},{"name":"increased cellular hydroxymethylglutaryl-CoA level","type":"exact"}],"termid":"FYPO:0006965"}


id: GO:0019331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of ammonium (NH4) to nitrogen (N2) in the absence of oxygen, using nitrite (NO2) as the electron acceptor. It is suggested that hydroxylamine and ammonium are combined to yield hydrazine, which is subsequently oxidized to N2.","definition_xrefs":["MetaCyc:P303-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic respiration","termid":"GO:0009061"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"},{"relation_name":"is_a","term_name":"ammonia oxidation","termid":"GO:0019329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"anaerobic respiration, using ammonium as electron donor","secondary_identifiers":["Wikipedia:Anammox"],"synonyms":[{"name":"anaerobic ammonium oxidation","type":"broad"},{"name":"anammox","type":"exact"}],"termid":"GO:0019331"}


id: PBO:0025450
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GNB2L1","termid":"PBO:0025450"}


id: PBO:0045867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2","termid":"PBO:0045867"}


id: PBO:0070641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 12","termid":"PBO:0070641"}


id: PBO:0065142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin releasing hormone","termid":"PBO:0065142"}


id: PBO:0059920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 6","termid":"PBO:0059920"}


id: GO:0008551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cd2+(in) = ADP + phosphate + Cd2+(out).","definition_xrefs":["PMID:17326661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cadmium ion transmembrane transporter activity","termid":"GO:0015086"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"P-type cadmium transporter activity","secondary_identifiers":["EC:7.2.2.21","GO:0008561","MetaCyc:3.6.3.3-RXN","RHEA:12132"],"synonyms":[{"name":"Cd(2+)-exporting ATPase activity","type":"related"},{"name":"Cd2+-exporting ATPase activity","type":"related"},{"name":"cadmium exporting ATPase activity","type":"exact"},{"name":"cadmium transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"cadmium-exporting ATPase activity","type":"narrow"},{"name":"cadmium-translocating P-type ATPase activity","type":"exact"}],"termid":"GO:0008551"}


id: MONDO:0009960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the NOD2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 1","secondary_identifiers":["OMIM:266600","SCTID:34000006","ICD9:555.9","DOID:0110892"],"synonyms":[{"name":"Crohn disease","type":"related"},{"name":"Crohn disease-associated Growth failure, susceptibility to","type":"related"},{"name":"IBD1","type":"exact"},{"name":"NOD2 inflammatory bowel disease","type":"exact"},{"name":"crohn disease-associated growth failure","type":"exact"},{"name":"inflammatory bowel disease (Crohn disease) 1","type":"related"},{"name":"inflammatory bowel disease 1","type":"exact"},{"name":"inflammatory bowel disease 1, Crohn disease","type":"exact"},{"name":"inflammatory bowel disease caused by mutation in NOD2","type":"exact"},{"name":"inflammatory bowel disease type 1","type":"exact"},{"name":"paediatric ulcerative colitis","type":"related"},{"name":"pediatric ulcerative colitis","type":"related"},{"name":"regional enteritis","type":"related"},{"name":"ulcerative colitis","type":"related"},{"name":"ulcerative colitis, paediatric","type":"related"},{"name":"ulcerative colitis, pediatric","type":"related"}],"termid":"MONDO:0009960","xrefs":{"Monarch":{"xref_id":"0009960"}}}


id: MONDO:0003193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the bile duct","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"bile duct carcinoma","termid":"MONDO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"bile duct adenocarcinoma","secondary_identifiers":["DOID:4896","NCIT:C27813","MEDGEN:234585","UMLS:C1370800"],"synonyms":[{"name":"bile duct adenocarcinoma","type":"exact"}],"termid":"MONDO:0003193","xrefs":{"Monarch":{"xref_id":"0003193"}}}


id: GO:1904132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in neural plate elongation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:dph","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in neural plate elongation","termid":"GO:1904130"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in neural plate elongation","termid":"GO:0022007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in neural plate elongation","synonyms":[{"name":"activation of convergent extension involved in neural plate elongation","type":"narrow"},{"name":"up regulation of convergent extension involved in neural plate elongation","type":"exact"},{"name":"up-regulation of convergent extension involved in neural plate elongation","type":"exact"},{"name":"upregulation of convergent extension involved in neural plate elongation","type":"exact"}],"termid":"GO:1904132"}


id: GO:0140909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of doubling of the number of maxicircles and minicircles and distribution of the progeny into two daughter networks, which are identical to the parent kinetoplast DNA network.","definition_xrefs":["PMID:12455998","PMID:15967722","GOC:ach","PMID:8561456","PMID:8045928","PMID:17462016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"kinetoplast DNA replication","synonyms":[{"name":"kDNA replication","type":"exact"},{"name":"kinetoplast DNA synthesis","type":"exact"},{"name":"replication of kinetoplast DNA","type":"exact"}],"termid":"GO:0140909"}


id: PBO:0072422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 27","termid":"PBO:0072422"}


id: PBO:0076970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 1","termid":"PBO:0076970"}


id: MONDO:0044993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the sympathetic nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sympathetic nervous system disorder","secondary_identifiers":["UMLS:C0750946","SCTID:50330009","MEDGEN:148206"],"synonyms":[{"name":"disease of sympathetic nervous system","type":"exact"},{"name":"disease or disorder of sympathetic nervous system","type":"exact"},{"name":"disorder of sympathetic nervous system","type":"exact"},{"name":"sympathetic nervous system disease","type":"exact"},{"name":"sympathetic nervous system disease or disorder","type":"exact"}],"termid":"MONDO:0044993","xrefs":{"Monarch":{"xref_id":"0044993"}}}


id: GO:0032141
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97685],"is_not":false,"summary":null,"term":"GO:0032141"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single cytosine insertion or a deletion that results in an unpaired cytosine.","definition_xrefs":["GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"single cytosine insertion binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032141","terms_by_termid":{"GO:0032141":null}}


id: FYPO:0001154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of methylamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular methylamine level","synonyms":[{"name":"increased cellular methylamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular methylamine level during vegetative growth","type":"exact"},{"name":"increased methylamine accumulation","type":"related"}],"termid":"FYPO:0001154"}


id: PBO:0003421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med15 (predicted)","termid":"PBO:0003421"}


id: GO:0006609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a heterogeneous nuclear ribonucleoprotein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA-binding (hnRNP) protein import into nucleus (obsolete GO:0006609)","synonyms":[{"name":"mRNA-binding (hnRNP) protein import into cell nucleus","type":"exact"},{"name":"mRNA-binding (hnRNP) protein transport from cytoplasm to nucleus","type":"exact"},{"name":"mRNA-binding (hnRNP) protein-nucleus import","type":"exact"}],"termid":"GO:0006609"}


id: MONDO:0010498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"MEND syndrome","secondary_identifiers":["DOID:0111865","UMLS:C4085243","MEDGEN:905986","Orphanet:401973","OMIM:300960","GARD:17666"],"synonyms":[{"name":"MEND","type":"related"},{"name":"MEND syndrome","type":"exact"},{"name":"MEND syndrome, X-linked recessive","type":"exact"},{"name":"Male EBP disorder with neurologic defects","type":"related"},{"name":"Male EBP disorder with neurological defects","type":"exact"}],"termid":"MONDO:0010498","xrefs":{"Monarch":{"xref_id":"0010498"}}}


id: GO:0006276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of the integrity of extrachromosomal plasmid DNA; includes processes that ensure plasmids are retained in the daughter cells after cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmid maintenance","termid":"GO:0006276"}


id: GO:0035496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + lipopolysaccharide = UDP + 1,5 alpha-D-galactosyl-lipopolysaccharide.","definition_xrefs":["PMID:11304545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lipopolysaccharide-1,5-galactosyltransferase activity","synonyms":[{"name":"LPS-1,5-galactosyltransferase activity","type":"exact"},{"name":"UDP-D-galactose:(glucosyl)lipopolysaccharide-1,5-D-galactosyltransferase","type":"exact"}],"termid":"GO:0035496"}


id: MONDO:0002933
data:
  {"annotated_genes":["SJAG_01183","SJAG_00516","SJAG_02342","SJAG_00993","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009815"},{"annotations":[85017,85018,85016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007970"},{"annotations":[86090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957262"}]},"cv_name":"mondo","definition":"Abnormally high bone density.","definition_xrefs":["NCIT:C41236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone remodeling disease","termid":"MONDO:0000833"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01183":null,"SJAG_02342":null},"genotype_count":0,"is_obsolete":false,"name":"osteosclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:10502","NANDO:2201022","SCTID:49347007","MESH:D010026","UMLS:C0029464","DOID:4254","icd11.foundation:2061303143"],"termid":"MONDO:0002933","terms_by_termid":{"MONDO:0007970":null,"MONDO:0009815":null,"MONDO:0957262":null},"xrefs":{"Monarch":{"xref_id":"0002933"}}}


id: PBO:0075078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 128","termid":"PBO:0075078"}


id: PBO:0061546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IA","termid":"PBO:0061546"}


id: MONDO:0015366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of hereditary sensory and autonomic neuropathy.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive hereditary sensory and autonomic neuropathy (obsolete MONDO:0015366)","secondary_identifiers":["Orphanet:140477"],"synonyms":[{"name":"hereditary sensory and autonomic neuropathy, autosomal recessive","type":"exact"}],"termid":"MONDO:0015366","xrefs":{"Monarch":{"xref_id":"0015366"}}}


id: MONDO:0800380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"17-alpha-hydroxylase/17,20-lyase deficiency, combined partial","secondary_identifiers":["MEDGEN:865627","UMLS:C4017190"],"termid":"MONDO:0800380","xrefs":{"Monarch":{"xref_id":"0800380"}}}


id: PBO:0012542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_agent","termid":"PBO:0012542"}


id: MONDO:0850130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gastroesophageal adenocarcinoma","secondary_identifiers":["DOID:0080375"],"termid":"MONDO:0850130","xrefs":{"Monarch":{"xref_id":"0850130"}}}


id: GO:0102087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzoate + L-glutamate + ATP = H+ + N-benzoyl-L-glutamate + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete N-benzoyl-L-glutamate synthetase activity (obsolete GO:0102087)","termid":"GO:0102087"}


id: PBO:0048273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT9 antisense RNA 1","termid":"PBO:0048273"}


id: MONDO:1010031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Triploidy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder, non-human animal","termid":"MONDO:1011307"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triploidy, non-human animal","secondary_identifiers":["OMIA:001180"],"termid":"MONDO:1010031","xrefs":{"Monarch":{"xref_id":"1010031"}}}


id: PBO:0088229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type","termid":"PBO:0088229"}


id: GO:0003055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the suprachiasmatic nucleus modulates heart rate at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian regulation of heart rate","termid":"GO:0003053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of heart rate by the suprachiasmatic nucleus","synonyms":[{"name":"SCN regulation of heart rate","type":"exact"},{"name":"circadian regulation of heart contraction rate by the suprachiasmatic nucleus","type":"related"},{"name":"master pacemaker clock regulation of heart rate","type":"exact"}],"termid":"GO:0003055"}


id: GO:1904591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein import.","definition_xrefs":["PMID:11406629","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"is_a","term_name":"regulation of protein import","termid":"GO:1904589"},{"relation_name":"positively_regulates","term_name":"protein import","termid":"GO:0017038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein import","synonyms":[{"name":"activation of protein import","type":"narrow"},{"name":"activation of protein uptake","type":"narrow"},{"name":"positive regulation of protein uptake","type":"exact"},{"name":"up regulation of protein import","type":"exact"},{"name":"up regulation of protein uptake","type":"exact"},{"name":"up-regulation of protein import","type":"exact"},{"name":"up-regulation of protein uptake","type":"exact"},{"name":"upregulation of protein import","type":"exact"},{"name":"upregulation of protein uptake","type":"exact"}],"termid":"GO:1904591"}


id: PBO:0029891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0029891"}


id: MONDO:0032902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 36","secondary_identifiers":["MEDGEN:1684786","OMIM:618763","GARD:16376","UMLS:C5231493"],"synonyms":[{"name":"JBTS36","type":"related"},{"name":"JOUBERT SYNDROME 36","type":"related"}],"termid":"MONDO:0032902","xrefs":{"Monarch":{"xref_id":"0032902"}}}


id: GO:0047156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + acetoin = 1-deoxy-D-altro-heptulose 7-phosphate + acetaldehyde.","definition_xrefs":["RHEA:21504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016744","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"acetoin-ribose-5-phosphate transaldolase activity","secondary_identifiers":["EC:2.2.1.4","MetaCyc:2.2.1.4-RXN","KEGG_REACTION:R02345"],"synonyms":[{"name":"1-deoxy-D-altro-heptulose-7-phosphate synthase activity","type":"related"},{"name":"1-deoxy-D-altro-heptulose-7-phosphate synthetase activity","type":"related"},{"name":"3-hydroxybutan-2-one:D-ribose-5-phosphate aldehydetransferase activity","type":"related"},{"name":"3-hydroxybutan-3-one:D-ribose-5-phosphate aldehydetransferase activity","type":"related"}],"termid":"GO:0047156"}


id: PBO:0058581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715a","termid":"PBO:0058581"}


id: PBO:0038492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 3","termid":"PBO:0038492"}


id: MONDO:0010030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disorder in which immune cells attack and destroy the glands that produce tears and saliva. Sjögren syndrome is also associated with rheumatic disorders such as rheumatoid arthritis or systemic lupus erythematosus. The hallmark symptoms of Sjögren syndrome are dry mouth and dry eyes. In addition, Sjogren syndrome may cause skin, nose, and vaginal dryness. It also may affect other organs of the body including the kidneys, blood vessels, lungs, liver, pancreas, and brain","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of exocrine system","termid":"MONDO:0000586"},{"relation_name":"is_a","term_name":"salivary gland disorder","termid":"MONDO:0001142"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of lacrimal gland","termid":"MONDO:0024625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"Sjogren syndrome","secondary_identifiers":["GARD:10252","MESH:D012859","OMIM:270150","icd11.foundation:899463360","UMLS:C1527336","DOID:12894","Orphanet:378","NANDO:2200420","ICD9:710.2","MEDGEN:282890","SCTID:83901003","Orphanet:289390","NANDO:1200280","EFO:0000699","NANDO:1200279","NCIT:C26883"],"synonyms":[{"name":"Sjogren syndrome","type":"exact"},{"name":"Sjogren's syndrome","type":"related"},{"name":"Sjögren syndrome","type":"exact"},{"name":"Sjögren-Gougerot syndrome","type":"exact"},{"name":"primary Sjogren-Gougerot syndrome","type":"exact"},{"name":"primary Sjögren syndrome","type":"related"},{"name":"primary Sjögren-Gougerot syndrome","type":"exact"},{"name":"sicca syndrome","type":"exact"},{"name":"syndrome, Sjogren's","type":"exact"},{"name":"xerodermosteosis","type":"exact"}],"termid":"MONDO:0010030","xrefs":{"Monarch":{"xref_id":"0010030"}}}


id: PBO:0076576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 4","termid":"PBO:0076576"}


id: PBO:0083470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PRR1","termid":"PBO:0083470"}


id: PBO:0087869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional coactivator; bridges the DNA-binding region of Gcn4p and TATA-binding protein Spt15p; suppressor of frameshift mutations; protein abundance increases in response to DNA replication stress","termid":"PBO:0087869"}


id: MONDO:0021353
data:
  {"annotated_genes":["SJAG_02748","SJAG_01419","SJAG_01156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86790,84573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[86651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01156":null,"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"is_obsolete":false,"name":"tumor of uterus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0042138","ICD9:239.5","SCTID:126908007","NCIT:C3435","EFO:0003859","ONCOTREE:UTERUS","MEDGEN:12030"],"synonyms":[{"name":"neoplasm of the uterus","type":"exact"},{"name":"neoplasm of uterus","type":"exact"},{"name":"tumor of the uterus","type":"exact"},{"name":"tumor of uterus","type":"exact"},{"name":"tumour of the uterus","type":"exact"},{"name":"uterine neoplasm","type":"exact"},{"name":"uterine neoplasms","type":"exact"},{"name":"uterine tumor","type":"exact"},{"name":"uterine tumour","type":"exact"},{"name":"uterus neoplasm","type":"exact"},{"name":"uterus neoplasm (disease)","type":"exact"},{"name":"uterus tumor","type":"exact"},{"name":"uterus tumour","type":"exact"}],"termid":"MONDO:0021353","terms_by_termid":{"MONDO:0011962":null,"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0021353"}}}


id: PBO:0050641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 6, pseudogene","termid":"PBO:0050641"}


id: MONDO:0005368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete obsessive-compulsive disorder (obsolete MONDO:0005368)","termid":"MONDO:0005368","xrefs":{"Monarch":{"xref_id":"0005368"}}}


id: MONDO:0009709
data:
  {"annotated_genes":["SJAG_00185"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85005],"is_not":false,"summary":null,"term":"MONDO:0009709"}]},"cv_name":"mondo","definition":"Any centronuclear myopathy in which the cause of the disease is a mutation in the BIN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive centronuclear myopathy","termid":"MONDO:0015705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"myopathy, centronuclear, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:98049","GARD:15208","MESH:C562934","OMIM:255200","UMLS:C0410204","DOID:0111220"],"synonyms":[{"name":"BIN1 centronuclear myopathy","type":"exact"},{"name":"CNM2","type":"related"},{"name":"centronuclear myopathy 2","type":"exact"},{"name":"centronuclear myopathy caused by mutation in BIN1","type":"exact"},{"name":"myopathy, centronuclear, 2","type":"exact"},{"name":"myopathy, centronuclear, autosomal recessive","type":"related"},{"name":"myopathy, centronuclear, type 2","type":"exact"},{"name":"myotubular myopathy, autosomal recessive","type":"related"}],"termid":"MONDO:0009709","terms_by_termid":{"MONDO:0009709":null},"xrefs":{"Monarch":{"xref_id":"0009709"}}}


id: MONDO:0017758
data:
  {"annotated_genes":["SJAG_04459","SJAG_01466","SJAG_03712","SJAG_01199","SJAG_03447","SJAG_04425","SJAG_03362","SJAG_04042","SJAG_01616","SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011790"},{"annotations":[86172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013761"},{"annotations":[84870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[84800,84799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[84776,84777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[85388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[86208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[85632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032705"},{"annotations":[86551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013382"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of metabolite absorption and transport","termid":"MONDO:0017757"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_01199":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_03362":null,"SJAG_03447":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of vitamin and non-protein cofactor absorption and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681037","GARD:21350","Orphanet:309827","icd11.foundation:1112006621","MEDGEN:1842689"],"synonyms":[{"name":"disorder of vitamin and non-protein cofactor absorption and transport","type":"exact"}],"termid":"MONDO:0017758","terms_by_termid":{"MONDO:0009238":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null,"MONDO:0011790":null,"MONDO:0013382":null,"MONDO:0013761":null,"MONDO:0032705":null},"xrefs":{"Monarch":{"xref_id":"0017758"}}}


id: PBO:0001851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase (predicted)","termid":"PBO:0001851"}


id: GO:2000047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell-cell adhesion mediated by cadherin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"cell-cell adhesion mediated by cadherin","termid":"GO:0044331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-cell adhesion mediated by cadherin","secondary_identifiers":["Reactome:R-HSA-9764260"],"termid":"GO:2000047"}


id: PR:O94573
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1773.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.16c","synonyms":[{"name":"Spom972h-SPBC1773.16c","type":"exact"}],"termid":"PR:O94573"}


id: MONDO:0003881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An apocrine adenocarcinoma that arises from the sweat glands in the vulva.","definition_xrefs":["NCIT:C40308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apocrine adenocarcinoma","termid":"MONDO:0003214"},{"relation_name":"is_a","term_name":"vulvar adenocarcinoma","termid":"MONDO:0024336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"vulvar apocrine adenocarcinoma","secondary_identifiers":["MEDGEN:384494","DOID:6448","UMLS:C2202741"],"synonyms":[{"name":"apocrine adenocarcinoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva apocrine adenocarcinoma","type":"exact"},{"name":"vulvar apocrine adenocarcinoma","type":"exact"}],"termid":"MONDO:0003881","xrefs":{"Monarch":{"xref_id":"0003881"}}}


id: FYPO:0003380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of the first meiotic nuclear division, in which homologous chromosomes are normally paired and segregated from each other, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased frequency of meiosis","termid":"FYPO:0000476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased frequency of meiosis I","synonyms":[{"name":"decreased frequency of first meiotic nuclear division","type":"exact"},{"name":"decreased meiosis I","type":"exact"},{"name":"meiosis I: decreased frequency","type":"exact"},{"name":"reduced frequency of meiosis I","type":"exact"}],"termid":"FYPO:0003380"}


id: GO:2000034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed development","termid":"GO:0080050"},{"relation_name":"regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed maturation","termid":"GO:2000034"}


id: GO:1904425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of GTP binding.","definition_xrefs":["PMID:19066305","PMID:21454546","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of GTP binding","synonyms":[{"name":"down regulation of GTP binding","type":"exact"},{"name":"down-regulation of GTP binding","type":"exact"},{"name":"downregulation of GTP binding","type":"exact"},{"name":"inhibition of GTP binding","type":"narrow"}],"termid":"GO:1904425"}


id: GO:0140956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl79-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl79-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of up to three methyl group to the lysine residue at position 79 of the histone H3 protein, producing H3K79me3.","definition_xrefs":["PMID:15371351","RHEA:60328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K79 methyltransferase activity","termid":"GO:0031151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0008276","GO:0016741","GO:0140096"],"is_obsolete":false,"name":"histone H3K79 trimethyltransferase activity","secondary_identifiers":["EC:2.1.1.360"],"synonyms":[{"name":"histone H3-K79 trimethylation","type":"broad"},{"name":"histone H3K79 trimethylase activity","type":"exact"},{"name":"histone H3K79 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K79 specific)","type":"exact"},{"name":"histone trimethylase activity (H3-K79 specific)","type":"exact"},{"name":"histone trimethyltransferase activity (H3-K79 specific)","type":"exact"},{"name":"histone-H3K79 trimethyltransferase activity","type":"exact"}],"termid":"GO:0140956"}


id: PBO:0086380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent permease of the ABC transporter family","termid":"PBO:0086380"}


id: GO:0010330
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, multimeric protein complex, organized in a rosette, which catalyzes the biosynthesis of cellulose for the plant cell wall.","definition_xrefs":["PMID:21307367","PMID:12514238","PMID:18485800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cellulose synthase complex","synonyms":[{"name":"CESA complex","type":"exact"}],"termid":"GO:0010330"}


id: MONDO:0019807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesocardia","secondary_identifiers":["Orphanet:95443","GARD:19259","UMLS:C0265865","icd11.foundation:1251061251","HP:0011599","ICD9:746.87","MEDGEN:488817","SCTID:16567006"],"synonyms":[{"name":"Midline heart","type":"exact"},{"name":"mesocardia","type":"exact"},{"name":"mesocardia (disease)","type":"exact"}],"termid":"MONDO:0019807","xrefs":{"Monarch":{"xref_id":"0019807"}}}


id: GO:0036407
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mycolic acid-rich cell outer membrane containing a lipid bilayer and long-chain mycolic acids (hydroxylated branched-chain fatty acids) that are covalently linked to the cell wall peptidoglycan via an arabinogalactan network. Found in mycobacteria and related genera (e.g. corynebacteria).","definition_xrefs":["GOC:das","GOC:bf","PMID:18567661","GOC:md","PMID:18316738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mycolate outer membrane","synonyms":[{"name":"MOM","type":"exact"},{"name":"mycobacterial outer membrane","type":"exact"},{"name":"mycomembrane","type":"exact"}],"termid":"GO:0036407"}


id: PBO:0040791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beaded filament structural protein 2","termid":"PBO:0040791"}


id: GO:0003254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of membrane depolarization. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization","termid":"GO:0003254"}


id: PBO:0066895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 195","termid":"PBO:0066895"}


id: GO:0009453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates.","definition_xrefs":["GOC:jl","PMID:11029423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"energy taxis","synonyms":[{"name":"energytaxis","type":"exact"},{"name":"taxis in response to energy source","type":"exact"}],"termid":"GO:0009453"}


id: MONDO:0002816
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"}]},"cv_name":"mondo","definition":"A disease involving the adrenal cortex.","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"is_obsolete":false,"name":"adrenal cortex disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0001614","SCTID:129636003","MESH:D000303","MEDGEN:154","DOID:3952"],"synonyms":[{"name":"adrenal cortex disease","type":"exact"},{"name":"adrenal cortex disease or disorder","type":"exact"},{"name":"disease of adrenal cortex","type":"exact"},{"name":"disease or disorder of adrenal cortex","type":"exact"},{"name":"disorder of adrenal cortex","type":"exact"}],"termid":"MONDO:0002816","terms_by_termid":{"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0002816"}}}


id: PBO:0041949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby family member 1, beta catenin antagonist","termid":"PBO:0041949"}


id: MONDO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of breast fibroadenoma without clinical significance. It is characterized by distortion and compression of the ducts by proliferating stromal cells.","definition_xrefs":["NCIT:C4271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast fibroadenoma","termid":"MONDO:0002056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast intracanalicular fibroadenoma","secondary_identifiers":["MEDGEN:137772","ICDO:9011/0","UMLS:C0334496","DOID:2656"],"synonyms":[{"name":"breast intracanalicular fibroadenoma","type":"exact"},{"name":"intracanalicular breast fibroadenoma","type":"exact"},{"name":"intracanalicular fibroadenoma","type":"exact"},{"name":"intracanalicular fibroadenoma of breast","type":"exact"},{"name":"intracanalicular fibroadenoma of the breast","type":"exact"}],"termid":"MONDO:0002377","xrefs":{"Monarch":{"xref_id":"0002377"}}}


id: SO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A right handed helix is a region of peptide where the coiled conformation turns in a clockwise, right handed screw.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_helix","termid":"SO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"right_handed_peptide_helix","secondary_identifiers":["BS:0000339"],"synonyms":[{"name":"helix","type":"related"},{"name":"right handed helix","type":"exact"}],"termid":"SO:0001116"}


id: PBO:0084139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity cysteine-specific transporter; has similarity to the Dal5p family of transporters; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YCT1 is not an essential gene","termid":"PBO:0084139"}


id: GO:0005307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: choline(out) + Na+(out) = choline(in) + Na+(in).","definition_xrefs":["TC:2.A.22.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline transmembrane transporter activity","termid":"GO:0015220"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"choline:sodium symporter activity","secondary_identifiers":["RHEA:76443"],"synonyms":[{"name":"sodium/choline symporter activity","type":"exact"}],"termid":"GO:0005307"}


id: PBO:0114388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfate transmembrane transporter Sul1","termid":"PBO:0114388"}


id: PR:Q09886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug42 gene.","definition_xrefs":["UniProtKB:Q09886","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 42 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.12","synonyms":[{"name":"Spom972h-mug42","type":"exact"}],"termid":"PR:Q09886"}


id: SO:0001426
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by the polymerase based sequence by synthesis method.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymerase_synthesis_read","synonyms":[{"name":"polymerase synthesis read","type":"related"}],"termid":"SO:0001426"}


id: MOD:01244
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamioc acid residue to the potassium glutamate salt.","definition_xrefs":["Unimod:530#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"monopotassium salt","termid":"MOD:01072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium L-glutamate","synonyms":[{"name":"Cation:K","type":"related"},{"name":"Replacement of proton by potassium","type":"related"}],"termid":"MOD:01244"}


id: PBO:0060802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S6","termid":"PBO:0060802"}


id: PBO:0034625
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomerase_RNA_reverse_transcriptase_activity","termid":"PBO:0034625"}


id: PBO:0073111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 39U member 1","termid":"PBO:0073111"}


id: MONDO:1010569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes insipidus, non-human animal","termid":"MONDO:1010051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, horse","secondary_identifiers":["OMIA:000278-9796"],"termid":"MONDO:1010569","xrefs":{"Monarch":{"xref_id":"1010569"}}}


id: MONDO:0017511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split hand, unilateral is a rare, non-syndromic limb reduction defect, clinically and genetically heterogeneous, characterized by unilateral underdevelopment or absence of the central rays of the autopod, with absence of all, or just some, of the central phalanges and at least part of the associated metacarpal bones, yielding a cleft appearance of the hand. It is frequently associated with syndactyly and aplasia/hypoplasia of remaining digits and metacarpal bones. No other dysmorphic features are observed and development is appropriate for age.","definition_xrefs":["Orphanet:295120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split hand","termid":"MONDO:0017449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand, unilateral","secondary_identifiers":["icd11.foundation:1675694993"],"termid":"MONDO:0017511","xrefs":{"Monarch":{"xref_id":"0017511"}}}


id: GO:0006555
data:
  {"annotated_genes":["SJAG_01466","SJAG_03556","SJAG_04953","SJAG_00395","SJAG_03671","SJAG_03614","SJAG_00309","SJAG_04425","SJAG_04042","SJAG_02689","SJAG_00234","SJAG_00881","SJAG_03152","SJAG_03712","SJAG_01404","SJAG_03141","SJAG_02290","SJAG_03881","SJAG_04459","SJAG_02293","SJAG_03659","SJAG_02972","SJAG_00419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102876,110119,112145],"is_not":false,"summary":null,"term":"GO:0006555"},{"annotations":[64977,64976,105459,110540,109957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[100162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[113376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[99496,95067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[98517,89287,92166,100148,106473,111874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[98030,89536,115228,111419,96143,97912,110542,102220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"},{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00309":null,"SJAG_00395":null,"SJAG_00419":null,"SJAG_00881":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03556":null,"SJAG_03614":null,"SJAG_03659":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03881":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"methionine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["UM-BBD_pathwayID:met"],"synonyms":[{"name":"methionine and threonine metabolic process","type":"broad"},{"name":"methionine and threonine metabolism","type":"broad"},{"name":"methionine metabolism","type":"exact"}],"termid":"GO:0006555","terms_by_termid":{"GO:0006555":null,"GO:0009086":null,"GO:0019279":null,"GO:0019280":null,"GO:0019509":null,"GO:0071266":null,"GO:1990355":null}}


id: GO:0090317
data:
  {"annotated_genes":["SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed movement of proteins within cells.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"negatively_regulates","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090317","terms_by_termid":{"GO:0042308":null}}


id: GO:0034420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of an acetyl group to one or more amino acids in a protein, occurring before the protein has been completely translated and released from the ribosome.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete co-translational protein acetylation (obsolete GO:0034420)","synonyms":[{"name":"co-translational protein amino acid acetylation","type":"exact"},{"name":"cotranslational protein amino acid acetylation","type":"exact"}],"termid":"GO:0034420"}


id: GO:0019358
data:
  {"annotated_genes":["SJAG_04467","SJAG_00957","SJAG_03298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88534,90166,109078],"is_not":false,"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"The generation of nicotinate nucleotide without de novo synthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinate nucleotide biosynthetic process","termid":"GO:0019357"},{"relation_name":"is_a","term_name":"pyridine nucleotide salvage","termid":"GO:0019365"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_03298":null,"SJAG_04467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nicotinate nucleotide salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nicotinate nucleotide biosynthesis, salvage pathway","type":"exact"},{"name":"nicotinate nucleotide biosynthetic process, salvage pathway","type":"exact"}],"termid":"GO:0019358","terms_by_termid":{"GO:0019358":null}}


id: GO:0008593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the Notch signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"Notch signaling pathway","termid":"GO:0007219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Notch signaling pathway","synonyms":[{"name":"regulation of N signaling pathway","type":"exact"},{"name":"regulation of N signalling pathway","type":"exact"},{"name":"regulation of Notch signalling pathway","type":"exact"}],"termid":"GO:0008593"}


id: PBO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"links stress-activated MAPK (Sty1) pathway to cAMP-dependent protein kinase (Pka1) pathway","termid":"PBO:0002434"}


id: PBO:0054787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2200","termid":"PBO:0054787"}


id: PBO:0065117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C theta","termid":"PBO:0065117"}


id: FYPO:0003968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that has a larger diameter and volume than normal, then initiates growth from the opposite end of the spore body, and does not go on to form a viable dividing cell. The cell may undergo one or two rounds of nuclear division, but does not undergo cytokinesis.","definition_xrefs":["PMID:9105045","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with swollen elongated germ tube","termid":"FYPO:0002911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with swollen elongated germ tube and bidirectional cell growth from spore body","synonyms":[{"name":"inviable after spore germination, without cell division, with swollen elongated cell and bidirectional cell growth from spore body","type":"exact"},{"name":"lethal after spore germination, without cell division, with swollen elongated germ tube and bidirectional cell growth from spore body","type":"exact"}],"termid":"FYPO:0003968"}


id: MONDO:0010546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central incisors, absence of","secondary_identifiers":["OMIM:302400","MEDGEN:337110","UMLS:C1844886"],"synonyms":[{"name":"central incisors, absence of","type":"exact"}],"termid":"MONDO:0010546","xrefs":{"Monarch":{"xref_id":"0010546"}}}


id: PBO:0005685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol binding protein (predicted)","termid":"PBO:0005685"}


id: GO:0010787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of inter-Golgi cisterna transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COPI coating of Golgi vesicle","termid":"GO:0048205"},{"relation_name":"part_of","term_name":"vesicle targeting, inter-Golgi cisterna","termid":"GO:0048204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"COPI coating of Golgi vesicle, inter-Golgi cisterna","termid":"GO:0010787"}


id: PBO:0078789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 12-1","termid":"PBO:0078789"}


id: PBO:0030140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_GTP_binding","termid":"PBO:0030140"}


id: GO:0046353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-deoxystreptamine antibiotic + acetyl-CoA = an N(3')-acetyl-2-deoxystreptamine antibiotic + CoA + H+.","definition_xrefs":["RHEA:12665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"aminoglycoside 3-N-acetyltransferase activity","secondary_identifiers":["MetaCyc:AMINOGLYCOSIDE-N3-ACETYLTRANSFERASE-RXN","EC:2.3.1.81","GO:0016991"],"synonyms":[{"name":"3'-aminoglycoside acetyltransferase activity","type":"related"},{"name":"3-N-aminoglycoside acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:2-deoxystreptamine-antibiotic N3'-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:gentamicin-C N3'-acetyltransferase activity","type":"narrow"},{"name":"aminoglycoside acetyltransferase AAC(3)-1","type":"related"},{"name":"aminoglycoside acetyltransferase AAC(3)-I activity","type":"related"},{"name":"gentamicin 3'-N-acetyltransferase activity","type":"narrow"},{"name":"gentamicin acetyltransferase I activity","type":"narrow"},{"name":"gentamicin-(3)-N-acetyltransferase activity","type":"narrow"},{"name":"gentamycin 3'-N-acetyltransferase activity","type":"exact"},{"name":"gentamycin acetyltransferase I","type":"related"}],"termid":"GO:0046353"}


id: PATO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being on the same side in relation to another structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ipsilateral to","synonyms":[{"name":"ipsilateral","type":"exact"}],"termid":"PATO:0002035"}


id: PBO:0040595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated agonist of cell death","termid":"PBO:0040595"}


id: GO:0039019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric nephron over time, from its formation to the mature structure. A pronephric nephron is the functional unit of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10","XAO:00002785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron development","termid":"GO:0039019"}


id: FYPO:0004435
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tingenone. Cells stop growing (and may die) at a concentration of tingenone that allows wild type cells to grow.","definition_xrefs":["PMID:18204818","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to tingenone","synonyms":[{"name":"hypersensitive to tingenone","type":"exact"},{"name":"sensitive to tingenone during mitotic cell cycle","type":"related"},{"name":"sensitive to tingenone during vegetative growth","type":"exact"}],"termid":"FYPO:0004435"}


id: GO:1990804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation process that is required for double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:TermGenie","PMID:22563681","GOC:rb","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in double-strand break repair via nonhomologous end joining (obsolete GO:1990804)","synonyms":[{"name":"protein amino acid phosphorylation involved in NHEJ","type":"exact"},{"name":"protein amino acid phosphorylation involved in double-strand break repair via nonhomologous end joining","type":"exact"},{"name":"protein phosphorylation involved in NHEJ","type":"exact"}],"termid":"GO:1990804"}


id: PBO:0086383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase of the DEAD-box protein family; constituent of 66S pre-ribosomal particles; essential protein involved in ribosome biogenesis","termid":"PBO:0086383"}


id: MONDO:0005573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete type II hypersensitivity reaction disease (obsolete MONDO:0005573)","termid":"MONDO:0005573","xrefs":{"Monarch":{"xref_id":"0005573"}}}


id: GO:0042007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-18.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-18 binding","synonyms":[{"name":"IL-18 binding","type":"exact"}],"termid":"GO:0042007"}


id: PBO:0040972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BNIP3 pseudogene 43","termid":"PBO:0040972"}


id: GO:0072374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-carotene + O2 + reduced [NADPH--hemoprotein reductase] = alpha-cryptoxanthin + H(+) + H2O + oxidized [NADPH--hemoprotein reductase]. Zeinoxanthin may also be used as the substrate, in which case lutein is produced.","definition_xrefs":["EC:1.14.14.158","PMID:8837513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"carotene epsilon hydroxylase activity","termid":"GO:0072374"}


id: PBO:0031363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_brefeldin_A","termid":"PBO:0031363"}


id: GO:0120234
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A glycocalyx on the the endolymphatic surface of a cochlear hair cell that coats the external surface of each stereocilium and maintains a small distance between adjacent stereocilia in the bundle.","definition_xrefs":["GOC:krc","PMID:31444330","ISBN:9781461268918","PMID:3583936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium coat","synonyms":[{"name":"auditory hair cell glycocalyx","type":"broad"},{"name":"stereocilium glycocalyx","type":"exact"}],"termid":"GO:0120234"}


id: GO:0019076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissemination of mature viral particles from a host cell, e.g. by cell lysis or the budding of virus particles from the cell membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"is_a","term_name":"exit from host cell","termid":"GO:0035891"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral release from host cell","secondary_identifiers":["Reactome:R-HSA-168298","VZ:1076"],"synonyms":[{"name":"release of virus from host","type":"exact"},{"name":"viral exit","type":"exact"},{"name":"viral release","type":"exact"},{"name":"viral shedding","type":"exact"},{"name":"virus exit from host cell","type":"exact"}],"termid":"GO:0019076"}


id: SO:0001193
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of GNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"GNA","termid":"SO:0001192"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Glycerol_nucleic_acid"],"synonyms":[{"name":"GNA oligo","type":"exact"},{"name":"glycerol nucleic acid","type":"exact"},{"name":"glycol nucleic acid","type":"exact"}],"termid":"SO:0001193"}


id: MONDO:0017445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acheiria","secondary_identifiers":["Orphanet:294983","SCTID:371199008","GARD:21196","UMLS:C0265594","MEDGEN:488815","icd11.foundation:1428065029"],"synonyms":[{"name":"congenital absence of hand","type":"exact"}],"termid":"MONDO:0017445","xrefs":{"Monarch":{"xref_id":"0017445"}}}


id: GO:1903692
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92835],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"The directed movement of methionine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:17556368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methionine transport","termid":"GO:0015821"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"methionine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044690"],"synonyms":[{"name":"methionine import","type":"broad"},{"name":"methionine import into cell","type":"exact"}],"termid":"GO:1903692","terms_by_termid":{"GO:1905626":null}}


id: PBO:0090801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Spo14","termid":"PBO:0090801"}


id: SO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 2KB 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upstream_gene_variant","termid":"SO:0001631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2KB_upstream_variant","synonyms":[{"name":"2KB upstream variant","type":"exact"},{"name":"near-gene-5","type":"exact"}],"termid":"SO:0001636"}


id: MONDO:0013770
data:
  {"annotated_genes":["SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86184],"is_not":false,"summary":null,"term":"MONDO:0013770"}]},"cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the GATA6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"},{"relation_name":"is_a","term_name":"GATA6-related congenital heart disease with or without pancreatic agenesis or neonatal diabetes","termid":"MONDO:0100540"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02730":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614475","UMLS:C3280943","MEDGEN:482573","DOID:0110114"],"synonyms":[{"name":"ASD9","type":"exact"},{"name":"GATA6 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in GATA6","type":"exact"},{"name":"atrial heart septal defect type 9","type":"exact"},{"name":"atrial septal defect 9","type":"exact"},{"name":"atrial septal defect type 9","type":"exact"}],"termid":"MONDO:0013770","terms_by_termid":{"MONDO:0013770":null},"xrefs":{"Monarch":{"xref_id":"0013770"}}}


id: GO:0035597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the methylthiolation (-SCH3 addition) at the C2 of the adenosine ring of N6-isopentenyladenosine (i6A) in tRNA, to form 2-methylthio-N6-isopentenyladenosine (ms2i6A).","definition_xrefs":["PMID:20472640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylthiotransferase activity","termid":"GO:0035596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"N6-isopentenyladenosine methylthiotransferase activity","synonyms":[{"name":"i6A methylthiotransferase activity","type":"exact"}],"termid":"GO:0035597"}


id: MONDO:0007388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital shortness of the costocoracoid ligament is a rare anomaly characterized by fixation of the scapula to the first rib, resulting in a cosmetic deformity with rounding of the shoulders and loss of the anterior clavicular contour.","definition_xrefs":["Orphanet:2391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenitally short costocoracoid ligament","secondary_identifiers":["UMLS:C1852523","SCTID:725101002","MESH:C536448","MEDGEN:342257","GARD:1551","OMIM:122580"],"synonyms":[{"name":"congenital shortness of the costocoracoid ligament","type":"related"},{"name":"costocoracoid ligament congenitally short","type":"related"},{"name":"costocoracoid ligament, congenitally short","type":"related"},{"name":"fixation of the scapula to the first rib by a congenitally short costocoracoid ligament","type":"related"}],"termid":"MONDO:0007388","xrefs":{"Monarch":{"xref_id":"0007388"}}}


id: PBO:0060326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO1D divergent transcript","termid":"PBO:0060326"}


id: GO:0009404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["GOC:cab2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"toxin metabolic process","synonyms":[{"name":"toxin metabolism","type":"exact"}],"termid":"GO:0009404"}


id: PBO:0061214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 6","termid":"PBO:0061214"}


id: PBO:0088133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; member of the multidrug resistance family; YCR023C is not an essential gene","termid":"PBO:0088133"}


id: GO:0033282
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex of protein C inhibitor (SERPINA5) and acrosin; formation of the complex inhibits the protease activity of acrosin.","definition_xrefs":["GOC:pr","PMID:11120760","PMID:7521127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"acrosomal membrane","termid":"GO:0002080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"protein C inhibitor-acrosin complex","synonyms":[{"name":"PCI-ACR complex","type":"exact"},{"name":"PCI-acrosin complex","type":"exact"},{"name":"SERPINA5-acrosin complex","type":"exact"},{"name":"plasma serine protease inhibitor-acrosin complex","type":"exact"},{"name":"serpin A5-acrosin complex","type":"exact"}],"termid":"GO:0033282"}


id: PBO:0108683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp7","termid":"PBO:0108683"}


id: MONDO:0003854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tibial adamantinoma (obsolete MONDO:0003854)","termid":"MONDO:0003854","xrefs":{"Monarch":{"xref_id":"0003854"}}}


id: MOD:01272
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:89#K","PubMed:9750125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iminobiotinyl modified residue","termid":"MOD:00467"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iminobiotinylation - site K","synonyms":[{"name":"Iminobiotin","type":"related"},{"name":"Iminobiotinylation","type":"related"}],"termid":"MOD:01272"}


id: PBO:0065256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 22","termid":"PBO:0065256"}


id: GO:1905839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric D-loop disassembly.","definition_xrefs":["GO_REF:0000058","GOC:nc","GOC:TermGenie","PMID:15200954","GOC:BHF","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomeric loop disassembly","termid":"GO:1904534"},{"relation_name":"is_a","term_name":"regulation of telomeric D-loop disassembly","termid":"GO:1905838"},{"relation_name":"negatively_regulates","term_name":"telomeric D-loop disassembly","termid":"GO:0061820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of telomeric D-loop disassembly","synonyms":[{"name":"down regulation of telomeric D-loop disassembly","type":"exact"},{"name":"down-regulation of telomeric D-loop disassembly","type":"exact"},{"name":"downregulation of telomeric D-loop disassembly","type":"exact"},{"name":"inhibition of telomeric D-loop disassembly","type":"narrow"}],"termid":"GO:1905839"}


id: GO:0003327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a type B pancreatic cell fate and its capacity to differentiate into a type B pancreatic cell. A type B pancreatic cell is a cell located towards center of the islets of Langerhans that secretes insulin.","definition_xrefs":["GOC:dph","CL:0000169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"type B pancreatic cell differentiation","termid":"GO:0003309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type B pancreatic cell fate commitment","synonyms":[{"name":"pancreatic B cell fate commitment","type":"exact"}],"termid":"GO:0003327"}


id: SO:0001688
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The boundary at which a restriction enzyme breaks the nucleotide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_cleavage_site","termid":"SO:0002204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_cleavage_junction","synonyms":[{"name":"restriction enzyme cleavage junction","type":"exact"}],"termid":"SO:0001688"}


id: MONDO:0017947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cerebral hemorrhage with amyloidosis (HCHWA), Italian type is a form of HCHWA characterized by an age of onset of 50 years of age, dementia and lobar intracerebral hemorrhage.","definition_xrefs":["Orphanet:324713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy, APP-related","termid":"MONDO:0011583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"ABeta amyloidosis, Italian type","secondary_identifiers":["ICD10EXP:I68.0*","MEDGEN:854854","UMLS:C3888308","GARD:17491","ICD10EXP:E85.4+"],"synonyms":[{"name":"ABetaE22K amyloidosis","type":"exact"},{"name":"HCHWA, Italian type","type":"exact"},{"name":"cerebral amyloid angiopathy, APP-related, Italian variant","type":"exact"},{"name":"hereditary cerebral haemorrhage with amyloidosis, Italian type","type":"exact"},{"name":"hereditary cerebral hemorrhage with amyloidosis, Italian type","type":"exact"}],"termid":"MONDO:0017947","xrefs":{"Monarch":{"xref_id":"0017947"}}}


id: PBO:0038671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 5","termid":"PBO:0038671"}


id: PBO:0092761
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_throughput_type","termid":"PBO:0092761"}


id: PBO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex associated protein Kti2 (predicted)","termid":"PBO:0002495"}


id: GO:0044733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of an acid-sensing ion channel (ASIC) in the bitten organism.","definition_xrefs":["GOC:jl","PMID:23034652","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of ion channel activity in another organism","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of acid-sensing ion channel activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of ASIC channel activity in other organism","type":"exact"},{"name":"envenomation resulting in modulation of acid-sensing ion channel activity in other organism","type":"exact"}],"termid":"GO:0044733"}


id: MONDO:0015849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare vaginal malformation characterized by the presence of a complete or incomplete septum dividing the vagina into two parallel cavities, resulting from failure of reabsorption of the midline uterine septum between the two fused Müllerian ducts during embryogenesis. Patients are often asymptomatic, but may present with menorrhagia, dysmenorrhea, dyspareunia, infertility, or spontaneous abortion. The condition may occur as an isolated malformation or in association with other Müllerian duct anomalies (such as septate uterus or uterus didelphys) or renal abnormalities.","definition_xrefs":["Orphanet:180157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longitudinal vaginal septum","secondary_identifiers":["UMLS:C1841680","GARD:20190","MEDGEN:331104","icd11.foundation:1594393492","HP:0008740"],"termid":"MONDO:0015849","xrefs":{"Monarch":{"xref_id":"0015849"}}}


id: GO:0050054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-bis(4-hydroxy-3-methoxyphenyl)ethylene + O2 = 2 vanillin.","definition_xrefs":["EC:1.13.11.43","RHEA:21340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"lignostilbene alpha beta-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R00043","MetaCyc:LIGNOSTILBENE-ALPHA-BETA-DIOXYGENASE-RXN"],"synonyms":[{"name":"1,2-bis(4-hydroxy-3-methoxyphenyl)ethylene:oxygen oxidoreductase (alphabeta-bond-cleaving)","type":"related"},{"name":"lignostilbene ab-dioxygenase activity","type":"exact"},{"name":"lignostilbene alphabeta-dioxygenase activity","type":"related"}],"termid":"GO:0050054"}


id: PR:O59683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor IF-2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor IF-2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.15c","secondary_identifiers":["UniProtKB:O59683"],"synonyms":[{"name":"IF-2(Mt) (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IF-2Mt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IF2(mt) (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTIF2","type":"exact"}],"termid":"PR:O59683"}


id: PBO:0040416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 1","termid":"PBO:0040416"}


id: PBO:0042333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD59 molecule (CD59 blood group)","termid":"PBO:0042333"}


id: PATO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being roundish, flattish shape, possibly with a slightly angled edge.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flat","termid":"PATO:0000407"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelike","synonyms":[{"name":"plate-like","type":"exact"}],"termid":"PATO:0002253"}


id: PBO:0016913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 1","termid":"PBO:0016913"}


id: GO:0018189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the cofactor pyrroloquinoline quinone (PQQ); it is synthesized from a small peptide containing tyrosine and glutamic acid; these amino acids in the peptide are multiply cross-linked and the rest of the peptide is removed.","definition_xrefs":["PMID:7665488","RESID:AA0283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrroloquinoline quinone biosynthetic process","synonyms":[{"name":"PQQ biosynthesis","type":"exact"},{"name":"PQQ biosynthetic process","type":"exact"},{"name":"coenzyme pyrroloquinoline-quinone biosynthesis","type":"exact"},{"name":"coenzyme pyrroloquinoline-quinone biosynthetic process","type":"exact"},{"name":"pyrroloquinoline quinone anabolism","type":"exact"},{"name":"pyrroloquinoline quinone biosynthesis","type":"exact"},{"name":"pyrroloquinoline quinone formation","type":"exact"},{"name":"pyrroloquinoline quinone synthesis","type":"exact"},{"name":"pyrroloquinoline-quinone biosynthesis","type":"exact"},{"name":"pyrroloquinoline-quinone biosynthetic process","type":"exact"}],"termid":"GO:0018189"}


id: PBO:0072645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTF1 homolog, Paf1/RNA polymerase II complex component","termid":"PBO:0072645"}


id: PR:Q9UTQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyridoxine-5'-phosphate oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01911","PANTHER:PTHR10851:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.02","secondary_identifiers":["UniProtKB:Q9UTQ1"],"synonyms":[{"name":"PNP/PMP oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PNPOx (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PNPO","type":"exact"}],"termid":"PR:Q9UTQ1"}


id: MONDO:0024415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"duodenitis","termid":"MONDO:0004627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hemorrhagic duodenitis","secondary_identifiers":["MEDGEN:137951","SCTID:95531001","ICD9:535.61","UMLS:C0341245"],"synonyms":[{"name":"erosive duodenitis","type":"related"},{"name":"hemorrhagic duodenitis","type":"exact"},{"name":"multiple duodenal erosions","type":"related"}],"termid":"MONDO:0024415","xrefs":{"Monarch":{"xref_id":"0024415"}}}


id: MONDO:1011605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, pig","termid":"MONDO:1010577"},{"relation_name":"is_a","term_name":"type 2 diabetes mellitus, non-human animal","termid":"MONDO:1011402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, pig","secondary_identifiers":["OMIA:000284-9823"],"termid":"MONDO:1011605","xrefs":{"Monarch":{"xref_id":"1011605"}}}


id: PBO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APAF1 interacting protein","termid":"PBO:0039702"}


id: PBO:0063273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 19 pseudogene","termid":"PBO:0063273"}


id: MOD:01513
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins that are nominally equal (sometimes called isobaric) at a resolution below 0.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by isobaric sets","termid":"MOD:00538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.1 Da","termid":"MOD:01513"}


id: FYPO:0005570
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119001,119000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[118979,118972,118983,118971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell periphery is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to cell periphery during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta"],"synonyms":[{"name":"abnormal protein localisation to cell periphery during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell periphery during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005570","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: MONDO:1012246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone dysplasia, non-human animal","termid":"MONDO:1011982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone dysplasia, dog","secondary_identifiers":["OMIA:000881-9615"],"termid":"MONDO:1012246","xrefs":{"Monarch":{"xref_id":"1012246"}}}


id: GO:0035613
data:
  {"annotated_genes":["SJAG_04527","SJAG_04880"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101668,109397],"is_not":false,"summary":null,"term":"GO:0035613"}]},"cv_name":"molecular_function","definition":"Binding to a stem-loop in an RNA molecule. An RNA stem-loop is a secondary RNA structure consisting of a double-stranded RNA (dsRNA) stem and a terminal loop.","definition_xrefs":["GOC:sart","PMID:16568238","PMID:20455544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04527":null,"SJAG_04880":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA stem-loop binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA hairpin binding","type":"exact"},{"name":"RNA hairpin loop binding","type":"exact"}],"termid":"GO:0035613","terms_by_termid":{"GO:0035613":null}}


id: GO:1902836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline import into cell.","definition_xrefs":["GO_REF:0000058","PMID:24344203","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of proline import across plasma membrane","termid":"GO:1902834"},{"relation_name":"positively_regulates","term_name":"proline import across plasma membrane","termid":"GO:1905647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of proline import across plasma membrane","synonyms":[{"name":"activation of proline import into cell","type":"narrow"},{"name":"positive regulation of proline import into cell","type":"exact"},{"name":"up regulation of proline import into cell","type":"exact"},{"name":"up-regulation of proline import into cell","type":"exact"},{"name":"upregulation of proline import into cell","type":"exact"}],"termid":"GO:1902836"}


id: PBO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency of long tract gene conversion in the rhp57 delta single mutant was suppressed in the swi5delta rhp57delta double mutant, to a level similar to that observed in the rhp51 mutant","termid":"PBO:0001351"}


id: PBO:0085799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains an N-terminal epsin-like domain; proposed to be involved in the trafficking of Arn1p in the absence of ferrichrome","termid":"PBO:0085799"}


id: GO:0080167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a karrikin stimulus. Karrikins are signaling molecules in smoke from burning vegetation that trigger seed germination for many angiosperms (flowering plants).","definition_xrefs":["PMID:20351290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to karrikin","termid":"GO:0080167"}


id: GO:0015779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glucuronosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Glucuronosides are any compound formed by combination of glycosidic linkage of a hydroxy compound (e.g. an alcohol or a saccharide) with the anomeric carbon atom of glucuronate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"glucuronoside transport","synonyms":[{"name":"glucuronide transport","type":"exact"}],"termid":"GO:0015779"}


id: GO:0031660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G2/M transition of the cell cycle.","definition_xrefs":["GOC:pr","GOC:dph","GOC:tb","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle (obsolete GO:0031660)","synonyms":[{"name":"G2/M-specific regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"regulation of cyclin-dependent protein kinase activity during G2/M","type":"related"},{"name":"regulation of cyclin-dependent protein kinase activity involved in G2/M","type":"broad"}],"termid":"GO:0031660"}


id: PBO:0090263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Nop14","termid":"PBO:0090263"}


id: SO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of an operon, which is a set of genes transcribed together as a unit.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_array_member","termid":"SO:0000081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"operon_member","synonyms":[{"name":"operon member","type":"exact"}],"termid":"SO:0000080"}


id: PBO:0056991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 33a","termid":"PBO:0056991"}


id: GO:0042194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of quinate, the anion of quinic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinate metabolic process","termid":"GO:0019630"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"quinate biosynthetic process","synonyms":[{"name":"quinate anabolism","type":"exact"},{"name":"quinate biosynthesis","type":"exact"},{"name":"quinate formation","type":"exact"},{"name":"quinate synthesis","type":"exact"},{"name":"quinic acid biosynthesis","type":"exact"},{"name":"quinic acid biosynthetic process","type":"exact"}],"termid":"GO:0042194"}


id: MONDO:0018162
data:
  {"annotated_genes":["SJAG_04449","SJAG_02791","SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[86406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"},{"annotations":[86448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011152"},{"annotations":[86051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012596"},{"annotations":[85471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013531"}]},"cv_name":"mondo","definition":"Serine-deficiency syndrome is a very rare infantile-onset potentially treatable neurometabolic disorder characterized clinically by microcephaly, neurodevelopmental disorders and seizures. Three serine-deficiency syndromes have been described: 3-phosphoglycerate dehydrogenase (3-PGDH) deficiency, 3-phosphoserine phosphatase (3-PSP) deficiency, and phosphoserine aminotransferase deficiency.","definition_xrefs":["Orphanet:35705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn serine deficiency","termid":"MONDO:0000421"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"neurometabolic disorder due to serine deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18815","UMLS:C5680148","MEDGEN:1842451"],"synonyms":[{"name":"neurometabolic disorder due to serine deficiency","type":"exact"},{"name":"serine deficiency","type":"exact"}],"termid":"MONDO:0018162","terms_by_termid":{"MONDO:0009736":null,"MONDO:0011152":null,"MONDO:0012596":null,"MONDO:0013531":null,"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0018162"}}}


id: MONDO:0008428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Septooptic dysplasia (SOD) is a clinically heterogeneous disorder characterized by the classical triad of optic nerve hypoplasia, pituitary hormone abnormalities and midline brain defects.","definition_xrefs":["Orphanet:3157"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic developmental defect of the eye (obsolete MONDO:0015218)","termid":"MONDO:0015218"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with a central nervous system malformation as major feature (obsolete MONDO:0015220)","termid":"MONDO:0015220"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic optic nerve hypoplasia (obsolete MONDO:0015310)","termid":"MONDO:0015310"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"obsolete disease associated with non-acquired combined pituitary hormone deficiency (obsolete MONDO:0019827)","termid":"MONDO:0019827"},{"relation_name":"excluded_subClassOf","term_name":"obsolete developmental defect of the eye (obsolete MONDO:0020145)","termid":"MONDO:0020145"},{"relation_name":"is_a","term_name":"autosomal genetic disease","termid":"MONDO:0000429"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"septooptic dysplasia","secondary_identifiers":["UMLS:C0338503","MEDGEN:90926","SCTID:7611002","GARD:7627","OMIM:182230","DOID:0060857","NANDO:1200561","NANDO:2200820","MESH:D025962","MedDRA:10067159","NANDO:1200560","NCIT:C85063"],"synonyms":[{"name":"De Morsier syndrome","type":"exact"},{"name":"Growth hormone deficiency with pituitary anomalies","type":"related"},{"name":"SOD","type":"exact"},{"name":"hypopituitarism and septooptic 'dysplasia'","type":"related"},{"name":"pituitary hormone deficiency, combined, 5","type":"related"},{"name":"septo-optic dysplasia","type":"exact"},{"name":"septo-optic dysplasia sequence","type":"exact"},{"name":"septo-optic dysplasia spectrum","type":"related"},{"name":"septo-optic dysplasia with growth hormone deficiency","type":"related"},{"name":"septooptic dysplasia","type":"exact"}],"termid":"MONDO:0008428","xrefs":{"Monarch":{"xref_id":"0008428"}}}


id: PBO:0072419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 24","termid":"PBO:0072419"}


id: PATO:0001752
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A heterochronic growth quality inhering in an organism, structure, or group of organisms by virtue of the bearer's increased growth.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochronic growth","termid":"PATO:0001490"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peramorphic growth","synonyms":[{"name":"hyperplastic growth","type":"exact"}],"termid":"PATO:0001752"}


id: GO:0061515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a myeloid cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell development","termid":"GO:0061515"}


id: GO:0007441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anterior midgut (ectodermal) are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut (ectodermal) morphogenesis","termid":"GO:0007441"}


id: FYPO:0003191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to microtubules does not occur, and the protein is instead visible in one or a few foci or dots in the cytoplasm, during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:18799626","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to microtubule during mitotic interphase, with protein mislocalized to cytoplasmic foci","synonyms":[{"name":"abolished protein localisation to microtubule during mitotic interphase, with protein mislocalised to cytoplasmic foci","type":"exact"},{"name":"protein localization to microtubule abolished during interphase, with protein mislocalized to cytoplasmic foci, during vegetative growth","type":"exact"},{"name":"protein localization to microtubule abolished during mitotic interphase, with protein mislocalized to cytoplasmic foci","type":"exact"}],"termid":"FYPO:0003191"}


id: GO:0034060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a cyanelle.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle stroma","termid":"GO:0034060"}


id: GO:0018155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-protein cross-link between peptidyl-serine and peptidyl-cysteine by the synthesis of sn-(2S,6R)-lanthionine (meso-lanthione).","definition_xrefs":["RESID:AA0111"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via sn-(2S,6R)-lanthionine (obsolete GO:0018155)","termid":"GO:0018155"}


id: PBO:0035784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_degradation_during_vegetative_growth","termid":"PBO:0035784"}


id: FYPO:0003390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the medial cortex is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to medial cortex during vegetative growth","synonyms":[{"name":"ectopic protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalised to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to medial cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003390"}


id: PBO:0060307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL12B pseudogene 2","termid":"PBO:0060307"}


id: PBO:0087283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal recognition particle (SRP) receptor beta subunit; involved in SRP-dependent protein targeting; anchors the alpha subunit, Srp101p to the ER membrane","termid":"PBO:0087283"}


id: GO:0099537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling in either direction across the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling","termid":"GO:0099537"}


id: PBO:0084999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAP family histone chaperone; binds to histones and Rtt109p, stimulating histone acetyltransferase activity; possesses nucleosome assembly activity in vitro; proposed role in vacuolar protein sorting and in double-strand break repair; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084999"}


id: PBO:0081177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 27","termid":"PBO:0081177"}


id: PR:O74991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/TPR repeat protein pof3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.16","synonyms":[{"name":"Spom972h-pof3","type":"exact"}],"termid":"PR:O74991"}


id: GO:0046344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"},{"relation_name":"is_a","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"ecdysteroid catabolic process","synonyms":[{"name":"ecdysteroid breakdown","type":"exact"},{"name":"ecdysteroid catabolism","type":"exact"},{"name":"ecdysteroid degradation","type":"exact"}],"termid":"GO:0046344"}


id: MONDO:0014105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the DUSP6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 19 with or without anosmia","secondary_identifiers":["ICD10CM:E23.0","OMIM:615269","MEDGEN:815311","GARD:15931","UMLS:C3808981","DOID:0090090"],"synonyms":[{"name":"DUSP6 hypogonadotropic hypogonadism","type":"exact"},{"name":"HH19","type":"related"},{"name":"hypogonadotropic hypogonadism 19 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in DUSP6","type":"exact"}],"termid":"MONDO:0014105","xrefs":{"Monarch":{"xref_id":"0014105"}}}


id: RO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entity_and_a_process","termid":"RO:0002595"}


id: PBO:0042859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 77","termid":"PBO:0042859"}


id: MONDO:0013611
data:
  {"annotated_genes":["SJAG_02712","SJAG_03557"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85375,85376],"is_not":false,"summary":null,"term":"MONDO:0013611"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the MAK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"MAK-related retinopathy","termid":"MONDO:0700229"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02712":null,"SJAG_03557":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 62","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:481672","OMIM:614181","GARD:15767","UMLS:C3280042","ICD10CM:H35.5","DOID:0110380"],"synonyms":[{"name":"MAK retinitis pigmentosa","type":"exact"},{"name":"RP62","type":"exact"},{"name":"retinitis pigmentosa 62","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in MAK","type":"exact"},{"name":"retinitis pigmentosa type 62","type":"exact"}],"termid":"MONDO:0013611","terms_by_termid":{"MONDO:0013611":null},"xrefs":{"Monarch":{"xref_id":"0013611"}}}


id: PR:Q9UUA2-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent DNA helicase pfh1 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UUA2-1.","definition_xrefs":["UniProtKB:Q9UUA2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent DNA helicase pfh1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UUA2"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase pfh1 isoform Mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UUA2-1"],"synonyms":[{"name":"Spom972h-PIF1/iso:Mitochondrial","type":"exact"}],"termid":"PR:Q9UUA2-1"}


id: PBO:0072404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 9","termid":"PBO:0072404"}


id: GO:0060083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body.","definition_xrefs":["PMID:15827347","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder smooth muscle contraction","termid":"GO:0014832"},{"relation_name":"part_of","term_name":"micturition","termid":"GO:0060073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle contraction involved in micturition","synonyms":[{"name":"smooth muscle contraction involved in urination","type":"related"},{"name":"urinary bladder smooth muscle contraction involved in micturition","type":"related"}],"termid":"GO:0060083"}


id: GO:0051004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of the enzyme lipoprotein lipase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipoprotein lipase activity (obsolete GO:0051004)","termid":"GO:0051004"}


id: PBO:0040139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 2","termid":"PBO:0040139"}


id: FYPO:0004063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is normal (i.e. indistinguishable from wild type) during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoplasm","termid":"FYPO:0001788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to cytoplasm during cellular response to salt stress","synonyms":[{"name":"normal protein localisation to cytoplasm during cellular response to salt stress","type":"exact"},{"name":"normal protein localization to cytoplasm during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cytoplasm during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"normal protein localization to cytoplasm during salt stress","type":"exact"}],"termid":"FYPO:0004063"}


id: GO:0070227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a lymphocyte, a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196","CL:0000542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte apoptotic process","synonyms":[{"name":"lymphocyte apoptosis","type":"narrow"}],"termid":"GO:0070227"}


id: PR:Q10303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-specific chaperone cofactor E-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein alp21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.10","secondary_identifiers":["UniProtKB:Q10303"],"synonyms":[{"name":"Spom972h-TBCEL","type":"exact"},{"name":"altered polarity protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of tsm one protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10303"}


id: MONDO:0700243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by a variant in the CACNA1F gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"CACNA1F-related retinopathy","synonyms":[{"name":"CACNA1F-related retinopathy","type":"exact"}],"termid":"MONDO:0700243","xrefs":{"Monarch":{"xref_id":"0700243"}}}


id: PBO:0042826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 5A","termid":"PBO:0042826"}


id: PBO:0060401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-6 adenine-specific DNA methyltransferase 1","termid":"PBO:0060401"}


id: GO:0110166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitochondrial DNA replication.","definition_xrefs":["PMID:28408491","PMID:29931097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"},{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"part_of","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0007005","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"DNA synthesis involved in mitochondrial DNA replication","synonyms":[{"name":"DNA biosynthetic process involved in mitochondrial DNA replication","type":"exact"}],"termid":"GO:0110166"}


id: PBO:0069350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 610, pseudogene","termid":"PBO:0069350"}


id: PBO:0043088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesterol induced regulator of metabolism RNA","termid":"PBO:0043088"}


id: PBO:0072250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 25","termid":"PBO:0072250"}


id: MONDO:0044249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alkaline phosphatase, plasma level of, quantitative trait locus 1 (obsolete MONDO:0044249)","secondary_identifiers":["OMIM:171720"],"synonyms":[{"name":"Alpqtl1","type":"related"},{"name":"alkaline phosphatase, elevated serum","type":"related"},{"name":"alkaline phosphatase, plasma level OF, quantitative trait locus 1","type":"related"},{"name":"alkaline phosphatase, plasma level of, QTL1","type":"exact"},{"name":"hyperphosphatasemia, benign familial","type":"related"}],"termid":"MONDO:0044249","xrefs":{"Monarch":{"xref_id":"0044249"}}}


id: FYPO:0002191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is shaped in the form of a spheroid, has one or more septa, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen spheroid vegetative cell","termid":"FYPO:0002190"},{"relation_name":"is_a","term_name":"swollen septated spheroid vegetative cell","termid":"FYPO:0002240"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable swollen septated spheroid vegetative cell","synonyms":[{"name":"inviable enlarged septated spheroid vegetative cell","type":"related"},{"name":"inviable enlarged volume septated spheroid vegetative cell","type":"exact"},{"name":"inviable septated large spheroid vegetative cell","type":"related"},{"name":"inviable swollen septated rounded vegetative cell","type":"exact"},{"name":"inviable swollen septated spheroid cell during vegetative growth","type":"exact"},{"name":"inviable swollen septated spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable, septated, increased spheroid vegetative cell size","type":"related"},{"name":"inviable, septated, increased spheroid vegetative cell volume","type":"exact"},{"name":"lethal; swollen septated spheroid vegetative cell","type":"exact"}],"termid":"FYPO:0002191"}


id: PBO:0081012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 46","termid":"PBO:0081012"}


id: PBO:0054013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1343","termid":"PBO:0054013"}


id: MONDO:0014802
data:
  {"annotated_genes":["SJAG_03153","SJAG_02539"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85328,85329],"is_not":false,"summary":null,"term":"MONDO:0014802"}]},"cv_name":"mondo","definition":"Any Cowden disease in which the cause of the disease is a mutation in the SEC23B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02539":null,"SJAG_03153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"Cowden syndrome 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616858","DOID:0081003","UMLS:C4225179","GARD:16470","MEDGEN:908796"],"synonyms":[{"name":"CWS7","type":"related"},{"name":"Cowden disease caused by mutation in SEC23B","type":"exact"},{"name":"Cowden syndrome 7","type":"exact"},{"name":"Cowden syndrome type 7","type":"exact"},{"name":"SEC23B Cowden disease","type":"exact"}],"termid":"MONDO:0014802","terms_by_termid":{"MONDO:0014802":null},"xrefs":{"Monarch":{"xref_id":"0014802"}}}


id: PBO:0078282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 15-1","termid":"PBO:0078282"}


id: GO:0008918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + lipopolysaccharide = UDP + 1,3 alpha-D-galactosyl-lipopolysaccharide.","definition_xrefs":["EC:2.4.1.44","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lipopolysaccharide 3-alpha-galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-22172"],"synonyms":[{"name":"LPS 3-alpha-galactosyltransferase activity","type":"exact"},{"name":"UDP-galactose:lipopolysaccharide 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:lipopolysaccharide alpha,3-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:polysaccharide galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:lipopolysaccharide 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"lipopolysaccharide 1,3-galactosyltransferase activity","type":"related"},{"name":"lipopolysaccharide galactosyltransferase activity","type":"exact"},{"name":"lipopolysaccharide-alpha-1,3-D-galactosyltransferase","type":"narrow"},{"name":"uridine diphosphate galactose:lipopolysaccharide alpha-3-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-lipopolysaccharide alpha,3-galactosyltransferase activity","type":"related"}],"termid":"GO:0008918"}


id: PR:Q9Y806
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC146.04 gene.","definition_xrefs":["UniProtKB:Q9Y806","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-linked sulfhydryl oxidase erv2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.04","synonyms":[{"name":"Spom972h-SPBC146.04","type":"exact"}],"termid":"PR:Q9Y806"}


id: PBO:0057997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3921","termid":"PBO:0057997"}


id: GO:0070599
data:
  {"annotated_genes":["SJAG_04236","SJAG_04666","SJAG_00424","SJAG_02278","SJAG_04184","SJAG_02916","SJAG_00610","SJAG_03057","SJAG_01028"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108533,113822,88658,117230,103655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[88952,91935,94441,102335],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070597"},{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide metabolic process","termid":"GO:0071966"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"fungal-type cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall 1,3-alpha-glucan metabolic process","type":"exact"},{"name":"ascospore wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"ascospore wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"ascospore wall alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070599","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: PBO:0035957
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_checkpoint_complex_assembly","termid":"PBO:0035957"}


id: PBO:0060529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 2","termid":"PBO:0060529"}


id: PBO:0042118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 190","termid":"PBO:0042118"}


id: MONDO:0021202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A otitis media (disease) with a basis in a pathological type I hypersensitivity reaction.","definition_xrefs":["MONDO:patterns/allergic_form_of_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"},{"relation_name":"is_a","term_name":"otitis media","termid":"MONDO:0005441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"allergic otitis media","secondary_identifiers":["SCTID:26169004","UMLS:C0271447","MEDGEN:543352"],"synonyms":[{"name":"allergic form of otitis media (disease)","type":"exact"},{"name":"allergic otitis media (disease)","type":"exact"}],"termid":"MONDO:0021202","xrefs":{"Monarch":{"xref_id":"0021202"}}}


id: PBO:0071140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 3","termid":"PBO:0071140"}


id: PBO:0076175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1D member 1, pseudogene","termid":"PBO:0076175"}


id: PBO:0087364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific exo-1,3-beta-glucanase; contributes to ascospore thermoresistance; SPR1 has a paralog, EXG1, that arose from the whole genome duplication","termid":"PBO:0087364"}


id: PBO:0061293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 4","termid":"PBO:0061293"}


id: PBO:0002631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp8","termid":"PBO:0002631"}


id: PR:O42918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu7 gene.","definition_xrefs":["UniProtKB:O42918","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.13","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-meu7","type":"exact"},{"name":"meiotic expression up-regulated protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42918"}


id: PBO:0003410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki2","termid":"PBO:0003410"}


id: PBO:0080700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNT5A antisense RNA 1","termid":"PBO:0080700"}


id: PR:Q9UTB6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sds3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTB6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein sds3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.02","synonyms":[{"name":"Spom972h-sds3","type":"exact"},{"name":"clr6 histone deacetylase complex I subunit Sds3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTB6"}


id: GO:0072098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the kidney along the anterior/posterior axis to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification involved in kidney development","synonyms":[{"name":"anterior/posterior pattern formation involved in kidney development","type":"related"},{"name":"kidney anterior/posterior pattern formation","type":"related"},{"name":"kidney anterior/posterior pattern specification","type":"exact"}],"termid":"GO:0072098"}


id: GO:0019575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose, catalyzed by the enzyme beta-fructofuranosidase (EC:3.2.1.26).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using beta-fructofuranosidase (obsolete GO:0019575)","synonyms":[{"name":"sucrose breakdown, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolic process, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolism, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose degradation, using beta-fructofuranosidase","type":"exact"}],"termid":"GO:0019575"}


id: PBO:0044152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDNEP1 pseudogene 1","termid":"PBO:0044152"}


id: MONDO:0001100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excessive enlargement of one or both breasts. Causes include pregnancy, obesity, and penicillamine therapy. It may result in neck, back, and shoulder pain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophy of breast","secondary_identifiers":["icd11.foundation:2078176266","ICD10CM:N62","ICD9:611.1","SCTID:372281005","MEDGEN:43789","NCIT:C3125","DOID:10688","UMLS:C0020565"],"synonyms":[{"name":"breast Hypertrophy","type":"exact"},{"name":"breasts enlarged","type":"exact"},{"name":"drug-induced gigantomastia (subtype)","type":"related"},{"name":"gestational gigantomastia (subtype)","type":"related"},{"name":"gigantomastia","type":"exact"},{"name":"hypertrophy of the breast","type":"exact"},{"name":"idiopathic gigantomastia (subtype)","type":"related"},{"name":"juvenile gigantomastia (subtype)","type":"related"},{"name":"large breast","type":"exact"},{"name":"macromastia","type":"exact"},{"name":"medication-induced gigantomastia (subtype)","type":"related"},{"name":"pregnancy-induced gigantomastia (subtype)","type":"related"},{"name":"puberty-induced gigantomastia (subtype)","type":"related"}],"termid":"MONDO:0001100","xrefs":{"Monarch":{"xref_id":"0001100"}}}


id: PBO:0050055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, V (pseudogene)","termid":"PBO:0050055"}


id: GO:0106009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(4S)-4-hydroxy-2-oxoglutarate = pyruvate + glyoxylate. Specific for the (4S) enantiomer of 4-hydroxy-2-oxoglutarate.","definition_xrefs":["PMID:1098660","PMID:1339418","RHEA:35639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(4S)-4-hydroxy-2-oxoglutarate aldolase activity","secondary_identifiers":["EC:4.1.3.42"],"termid":"GO:0106009"}


id: MONDO:0002805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm arising from the sweat glands. Variants include the clear cell and nodular hidradenoma.","definition_xrefs":["NCIT:C7563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland adenoma","termid":"MONDO:0021110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hidradenoma","secondary_identifiers":["UMLS:C5848251","DOID:3896","MEDGEN:1851798","SCTID:400099008"],"synonyms":[{"name":"acrospiroma","type":"related"},{"name":"eccrine acrospiroma","type":"related"},{"name":"hidradenoma","type":"exact"},{"name":"hidradenoma of skin","type":"exact"},{"name":"sweat gland adenoma","type":"related"},{"name":"syringoadenoma","type":"exact"}],"termid":"MONDO:0002805","xrefs":{"Monarch":{"xref_id":"0002805"}}}


id: RO:HOM0000013
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Syntenic homology that involves chromosomes of different species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_syntenic_homology_relationship_with","termid":"RO:HOM0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_syntenic_orthology_relationship_with","synonyms":[{"name":"syntenic orthologous to","type":"exact"}],"termid":"RO:HOM0000013"}


id: GO:2000254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of male germ cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of germ cell proliferation","termid":"GO:1905936"},{"relation_name":"regulates","term_name":"male germ cell proliferation","termid":"GO:0002176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of male germ cell proliferation","termid":"GO:2000254"}


id: PBO:0049212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 3B","termid":"PBO:0049212"}


id: PBO:0076992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP7 antisense RNA 1","termid":"PBO:0076992"}


id: FYPO:0003554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of degradation of RNA transcribed from middle meiotic genes is increased during late meiosis. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PMID:20531409","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA catabolic process","termid":"FYPO:0003553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased degradation of middle meiotic gene mRNA during late meiosis","synonyms":[{"name":"increased breakdown of middle meiotic gene mRNA during late meiosis","type":"exact"},{"name":"increased catabolism of middle meiotic gene mRNA during late meiosis","type":"exact"},{"name":"increased degradation of middle meiosis gene mRNA during late meiosis","type":"exact"},{"name":"increased degradation of middle meiotic gene RNA during late meiosis","type":"exact"},{"name":"increased degradation of middle meiotic gene mRNA during late meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003554"}


id: GO:0102722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-hydroxybutyrate + NAD(P) = 4-oxobutanoate + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-hydroxybutyrate dehydrogenase activity (NAD(P)-dependent (obsolete GO:0102722)","termid":"GO:0102722"}


id: PBO:0049058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 63","termid":"PBO:0049058"}


id: PBO:0042429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 37, HSP90 cochaperone","termid":"PBO:0042429"}


id: MONDO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CD3delta deficiency (obsolete MONDO:0000576)","termid":"MONDO:0000576","xrefs":{"Monarch":{"xref_id":"0000576"}}}


id: FYECO:0000324
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which latrunculin B was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ latB","synonyms":[{"name":"+ latrunculin B","type":"exact"}],"termid":"FYECO:0000324"}


id: PBO:0059976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 21","termid":"PBO:0059976"}


id: GO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the site where a daughter cell will form, in organisms that reproduce by budding. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0007163","GO:0007049"],"is_obsolete":false,"name":"cellular bud site selection","synonyms":[{"name":"bud site selection/establishment of cell polarity","type":"broad"}],"termid":"GO:0000282"}


id: PBO:0074467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submaxillary gland androgen regulated protein 3A","termid":"PBO:0074467"}


id: MONDO:0005325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the radius bone in which the continuity of the bone is broken.","definition_xrefs":["EFO:0003957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radius fracture","secondary_identifiers":["SCTID:12676007","MESH:D011885"],"termid":"MONDO:0005325","xrefs":{"Monarch":{"xref_id":"0005325"}}}


id: GO:0055048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart, in the absence of centrosomes. Formation is initiated by the nucleation of microtubules (MTs) in the vicinity of condensed chromatin. MTs then attach to and congress around the chromatin due to activity of microtubule motors. A bipolar spindle is formed by focusing of the terminal ends of the MT array into spindle poles by molecular motors and cross-linking proteins.","definition_xrefs":["GOC:mtg_sensu","PMID:15034926","GOC:expert_rg","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0044085","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"anastral spindle assembly","termid":"GO:0055048"}


id: PR:Q9P7Z8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC26H8.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Z8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26H8.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.13c","synonyms":[{"name":"Spom972h-SPBC26H8.13c","type":"exact"}],"termid":"PR:Q9P7Z8"}


id: GO:2000497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000495"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000497"}


id: MONDO:0021017
data:
  {"annotated_genes":["SJAG_00924","SJAG_03056","SJAG_04821","SJAG_00826","SJAG_04728","SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012518"},{"annotations":[85697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013883"},{"annotations":[84940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014543"},{"annotations":[84937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014542"},{"annotations":[84779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014590"},{"annotations":[85565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012157"},{"annotations":[85806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032596"}]},"cv_name":"mondo","definition":"A disease caused by dysfunction of synapses.","definition_xrefs":["Wikipedia:Synaptopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00826":null,"SJAG_00924":null,"SJAG_01872":null,"SJAG_03056":null,"SJAG_04728":null,"SJAG_04821":null},"genotype_count":0,"is_obsolete":false,"name":"synaptopathy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0021017","terms_by_termid":{"MONDO:0012157":null,"MONDO:0012518":null,"MONDO:0013883":null,"MONDO:0014542":null,"MONDO:0014543":null,"MONDO:0014590":null,"MONDO:0032596":null},"xrefs":{"Monarch":{"xref_id":"0021017"}}}


id: GO:0005373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transporter of heavy metal ions that utilizes a carrier-mediated process to catalyze uniport, symport or antiport between aqueous phases on either side of a lipid membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion porter activity (obsolete GO:0005373)","synonyms":[{"name":"heavy metal ion porter activity","type":"exact"},{"name":"metal ion transporter","type":"broad"}],"termid":"GO:0005373"}


id: GO:0043530
data:
  {"annotated_genes":["SJAG_01231"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114136],"is_not":false,"summary":null,"term":"GO:0043530"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine 5'-monophosphoramidate + H2O = AMP + NH4+. Other substrates include AMP-morpholidate, AMP-N-alanine methyl ester and AMP-alpha-acetyl lysine methyl ester.","definition_xrefs":["PMID:11805111","RHEA:67916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"adenosine 5'-monophosphoramidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5' monophosphoramidase activity","type":"exact"},{"name":"adenosine 5'-monophosphoramidate hydrolase activity","type":"exact"}],"termid":"GO:0043530","terms_by_termid":{"GO:0043530":null}}


id: FYPO:0003511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-ergothioneine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"},{"relation_name":"is_a","term_name":"decreased cellular L-ergothioneine level","termid":"FYPO:0003521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"L-ergothioneine absent from cell","termid":"FYPO:0003511"}


id: PBO:0046700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS2 pseudogene 1","termid":"PBO:0046700"}


id: PBO:0048313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 24","termid":"PBO:0048313"}


id: PBO:0002092
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAs Like","termid":"PBO:0002092"}


id: FYPO:0001459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the level of transcription from a calcineurin-dependent response element (CDRE)-containing promoter is higher than normal in the absence of a calcium ion stimulus.","definition_xrefs":["PMID:21811607","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased basal transcription from CDRE promoter (obsolete FYPO:0001459)","synonyms":[{"name":"increased basal transcription from CDRE promoter during mitotic cell cycle","type":"related"},{"name":"increased basal transcription from CDRE promoter during vegetative growth","type":"exact"},{"name":"increased transcription from CRDE promoter in the absence of calcium","type":"exact"}],"termid":"FYPO:0001459"}


id: GO:1990668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane of the ERGIC. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane","synonyms":[{"name":"vesicle fusion with ER-Golgi intermediate compartment (ERGIC) membrane","type":"exact"},{"name":"vesicle fusion with ER-Golgi intermediate compartment membrane","type":"exact"},{"name":"vesicle fusion with ERGIC membrane","type":"exact"},{"name":"vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:1990668"}


id: PBO:0039200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 3","termid":"PBO:0039200"}


id: PBO:0003120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin homolog (predicted)","termid":"PBO:0003120"}


id: PR:O74733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cleavage and polyadenylation specificity factor subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02722","PANTHER:PTHR10644:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.08","secondary_identifiers":["UniProtKB:O74733"],"synonyms":[{"name":"Spom972h-CPSF1","type":"exact"},{"name":"cleavage factor two protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74733"}


id: PBO:0052864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-7","termid":"PBO:0052864"}


id: MONDO:0008594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, skin tumor disorder characterized by childhood-onset of multiple, benign, asymptomatic, white to flesh-colored papules predominantly located on the face, ears, neck and trunk, not associated with systemic organ involvement, associated malignancies or FLCN gene locus mutation.","definition_xrefs":["Orphanet:538756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial multiple discoid fibromas","secondary_identifiers":["GARD:8479","MESH:C536847","OMIM:190340","UMLS:C1860850","MEDGEN:348201"],"synonyms":[{"name":"FMDF","type":"exact"},{"name":"discoid fibromas, familial multiple","type":"related"},{"name":"familial multiple trichodiscomas","type":"related"},{"name":"hereditary multiple trichodiscomas","type":"related"},{"name":"small benign fibrovascular tumor of the dermal part of the hair disk","type":"related"},{"name":"small benign fibrovascular tumour of the dermal part of the hair disc","type":"related"},{"name":"trichodiscomas, familial multiple","type":"related"}],"termid":"MONDO:0008594","xrefs":{"Monarch":{"xref_id":"0008594"}}}


id: MOD:01742
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01742"}


id: MONDO:0859526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 109 with lymphoproliferation","secondary_identifiers":["MEDGEN:1840982","UMLS:C5830346","OMIM:620282"],"termid":"MONDO:0859526","xrefs":{"Monarch":{"xref_id":"0859526"}}}


id: PBO:0018051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase, involved in regulation of autophagy Ppm1 (predicted)","termid":"PBO:0018051"}


id: PBO:0003204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sid2-Mob1 kinase complex regulatory subunit Mob1","termid":"PBO:0003204"}


id: PBO:0054021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1352","termid":"PBO:0054021"}


id: PBO:0084414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Magnesium-dependent acid phosphatase; member of the haloacid dehalogenase superfamily; non-essential gene","termid":"PBO:0084414"}


id: MONDO:0024607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital muscular dystrophy characterized by onset of progressive muscle weakness in early childhood with autosomal recessive inheritance that has material basis in homozygous or compound heterozygous mutation in the INPP5K gene (607875) on chromosome 17p13.","definition_xrefs":["DOID:0080197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy with cataracts and intellectual disability","secondary_identifiers":["MEDGEN:1382291","OMIM:617404","UMLS:C4479410","Orphanet:662184"],"synonyms":[{"name":"MDCCAID","type":"related"},{"name":"muscular dystrophy, congenital, with cataracts and intellectual disability","type":"related"}],"termid":"MONDO:0024607","xrefs":{"Monarch":{"xref_id":"0024607"}}}


id: PBO:0071539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 4","termid":"PBO:0071539"}


id: PBO:0067088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 124, pseudogene","termid":"PBO:0067088"}


id: PBO:0070995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 19","termid":"PBO:0070995"}


id: PBO:0084177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone acetyltransferase; critical for cell survival in presence of DNA damage during S phase, required for recovery after DSB repair; acetylates H3K56, H3K9; H3K56 acetylation activity required for expression homeostasis, buffering of mRNA synthesis rate against changes in gene dosage during S phase; involved in non-homologous end joining and regulation of Ty1 transposition; prevents hyper-amplification of rDNA; interacts physically with Vps75p","termid":"PBO:0084177"}


id: GO:0033524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ester derivatives of sinapate, (2E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"sinapate ester metabolic process","synonyms":[{"name":"sinapate ester metabolism","type":"exact"}],"termid":"GO:0033524"}


id: MONDO:1011344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Perinatal disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perinatal disease, non-human animal","termid":"MONDO:1011344","xrefs":{"Monarch":{"xref_id":"1011344"}}}


id: PBO:0062901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase NAD binding domain containing 1","termid":"PBO:0062901"}


id: PR:O74767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10805:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.05","secondary_identifiers":["UniProtKB:O74767"],"synonyms":[{"name":"SPBC24C6.05","type":"related"},{"name":"Spom972h-COPE","type":"exact"},{"name":"epsilon-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"epsilon-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74767"}


id: MONDO:0018390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to sperm disorder (obsolete MONDO:0018390)","secondary_identifiers":["Orphanet:399771"],"termid":"MONDO:0018390","xrefs":{"Monarch":{"xref_id":"0018390"}}}


id: GO:0019583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactonate, the anion of galactonic acid, an organic acid derived from the sugar galactose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galactonate metabolic process","synonyms":[{"name":"galactonate metabolism","type":"exact"}],"termid":"GO:0019583"}


id: PR:O59666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A copper-exporting P-type ATPase A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03101","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-transporting ATPase ccc2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.01","secondary_identifiers":["UniProtKB:O59666"],"synonyms":[{"name":"Cu(2+)-ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-copA","type":"exact"}],"termid":"PR:O59666"}


id: MOD:01145
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to N-tau-(ADP-ribosyl)diphthamide.","definition_xrefs":["DeltaMass:0","ChEBI:82697"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine","termid":"MOD:00049"},{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-tau-(ADP-ribosyl)diphthamide","synonyms":[{"name":"MOD_RES ADP-ribosyldiphthamide","type":"exact"}],"termid":"MOD:01145"}


id: GO:1901671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of superoxide dismutase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of superoxide dismutase activity","termid":"GO:1901668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of superoxide dismutase activity","synonyms":[{"name":"activation of Cu,Zn-SOD","type":"related"},{"name":"activation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"activation of Fe-SOD","type":"related"},{"name":"activation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"activation of Mn-SOD","type":"related"},{"name":"activation of SOD","type":"related"},{"name":"activation of SOD-1","type":"related"},{"name":"activation of SOD-2","type":"related"},{"name":"activation of SOD-3","type":"related"},{"name":"activation of SOD-4","type":"related"},{"name":"activation of SODF","type":"related"},{"name":"activation of SODS","type":"related"},{"name":"activation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"activation of cuprein","type":"related"},{"name":"activation of cytocuprein","type":"related"},{"name":"activation of erythrocuprein","type":"related"},{"name":"activation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"activation of hemocuprein","type":"related"},{"name":"activation of hepatocuprein","type":"related"},{"name":"activation of iron superoxide dismutase activity","type":"narrow"},{"name":"activation of iron superoxide oxidoreductase","type":"related"},{"name":"activation of manganese superoxide dismutase activity","type":"narrow"},{"name":"activation of manganese superoxide oxidoreductase","type":"related"},{"name":"activation of nickel superoxide dismutase activity","type":"narrow"},{"name":"activation of nickel superoxide oxidoreductase","type":"related"},{"name":"activation of superoxide dismutase I","type":"related"},{"name":"activation of superoxide dismutase II","type":"related"},{"name":"activation of superoxide dismutase activity","type":"narrow"},{"name":"activation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"activation of zinc superoxide oxidoreductase","type":"related"},{"name":"positive regulation of Cu,Zn-SOD","type":"related"},{"name":"positive regulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"positive regulation of Fe-SOD","type":"related"},{"name":"positive regulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"positive regulation of Mn-SOD","type":"related"},{"name":"positive regulation of SOD","type":"related"},{"name":"positive regulation of SOD-1","type":"related"},{"name":"positive regulation of SOD-2","type":"related"},{"name":"positive regulation of SOD-3","type":"related"},{"name":"positive regulation of SOD-4","type":"related"},{"name":"positive regulation of SODF","type":"related"},{"name":"positive regulation of SODS","type":"related"},{"name":"positive regulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"positive regulation of cuprein","type":"related"},{"name":"positive regulation of cytocuprein","type":"related"},{"name":"positive regulation of erythrocuprein","type":"related"},{"name":"positive regulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"positive regulation of hemocuprein","type":"related"},{"name":"positive regulation of hepatocuprein","type":"related"},{"name":"positive regulation of iron superoxide dismutase activity","type":"narrow"},{"name":"positive regulation of iron superoxide oxidoreductase","type":"related"},{"name":"positive regulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"positive regulation of manganese superoxide oxidoreductase","type":"related"},{"name":"positive regulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"positive regulation of nickel superoxide oxidoreductase","type":"related"},{"name":"positive regulation of superoxide dismutase I","type":"related"},{"name":"positive regulation of superoxide dismutase II","type":"related"},{"name":"positive regulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"positive regulation of zinc superoxide oxidoreductase","type":"related"},{"name":"up regulation of Cu,Zn-SOD","type":"related"},{"name":"up regulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"up regulation of Fe-SOD","type":"related"},{"name":"up regulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"up regulation of Mn-SOD","type":"related"},{"name":"up regulation of SOD","type":"related"},{"name":"up regulation of SOD-1","type":"related"},{"name":"up regulation of SOD-2","type":"related"},{"name":"up regulation of SOD-3","type":"related"},{"name":"up regulation of SOD-4","type":"related"},{"name":"up regulation of SODF","type":"related"},{"name":"up regulation of SODS","type":"related"},{"name":"up regulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"up regulation of cuprein","type":"related"},{"name":"up regulation of cytocuprein","type":"related"},{"name":"up regulation of erythrocuprein","type":"related"},{"name":"up regulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"up regulation of hemocuprein","type":"related"},{"name":"up regulation of hepatocuprein","type":"related"},{"name":"up regulation of iron superoxide dismutase activity","type":"narrow"},{"name":"up regulation of iron superoxide oxidoreductase","type":"related"},{"name":"up regulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"up regulation of manganese superoxide oxidoreductase","type":"related"},{"name":"up regulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"up regulation of nickel superoxide oxidoreductase","type":"related"},{"name":"up regulation of superoxide dismutase I","type":"related"},{"name":"up regulation of superoxide dismutase II","type":"related"},{"name":"up regulation of superoxide dismutase activity","type":"exact"},{"name":"up regulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"up regulation of zinc superoxide oxidoreductase","type":"related"},{"name":"up-regulation of Cu,Zn-SOD","type":"related"},{"name":"up-regulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"up-regulation of Fe-SOD","type":"related"},{"name":"up-regulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"up-regulation of Mn-SOD","type":"related"},{"name":"up-regulation of SOD","type":"related"},{"name":"up-regulation of SOD-1","type":"related"},{"name":"up-regulation of SOD-2","type":"related"},{"name":"up-regulation of SOD-3","type":"related"},{"name":"up-regulation of SOD-4","type":"related"},{"name":"up-regulation of SODF","type":"related"},{"name":"up-regulation of SODS","type":"related"},{"name":"up-regulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"up-regulation of cuprein","type":"related"},{"name":"up-regulation of cytocuprein","type":"related"},{"name":"up-regulation of erythrocuprein","type":"related"},{"name":"up-regulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"up-regulation of hemocuprein","type":"related"},{"name":"up-regulation of hepatocuprein","type":"related"},{"name":"up-regulation of iron superoxide dismutase activity","type":"narrow"},{"name":"up-regulation of iron superoxide oxidoreductase","type":"related"},{"name":"up-regulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"up-regulation of manganese superoxide oxidoreductase","type":"related"},{"name":"up-regulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"up-regulation of nickel superoxide oxidoreductase","type":"related"},{"name":"up-regulation of superoxide dismutase I","type":"related"},{"name":"up-regulation of superoxide dismutase II","type":"related"},{"name":"up-regulation of superoxide dismutase activity","type":"exact"},{"name":"up-regulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"up-regulation of zinc superoxide oxidoreductase","type":"related"},{"name":"upregulation of Cu,Zn-SOD","type":"related"},{"name":"upregulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"upregulation of Fe-SOD","type":"related"},{"name":"upregulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"upregulation of Mn-SOD","type":"related"},{"name":"upregulation of SOD","type":"related"},{"name":"upregulation of SOD-1","type":"related"},{"name":"upregulation of SOD-2","type":"related"},{"name":"upregulation of SOD-3","type":"related"},{"name":"upregulation of SOD-4","type":"related"},{"name":"upregulation of SODF","type":"related"},{"name":"upregulation of SODS","type":"related"},{"name":"upregulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"upregulation of cuprein","type":"related"},{"name":"upregulation of cytocuprein","type":"related"},{"name":"upregulation of erythrocuprein","type":"related"},{"name":"upregulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"upregulation of hemocuprein","type":"related"},{"name":"upregulation of hepatocuprein","type":"related"},{"name":"upregulation of iron superoxide dismutase activity","type":"narrow"},{"name":"upregulation of iron superoxide oxidoreductase","type":"related"},{"name":"upregulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"upregulation of manganese superoxide oxidoreductase","type":"related"},{"name":"upregulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"upregulation of nickel superoxide oxidoreductase","type":"related"},{"name":"upregulation of superoxide dismutase I","type":"related"},{"name":"upregulation of superoxide dismutase II","type":"related"},{"name":"upregulation of superoxide dismutase activity","type":"exact"},{"name":"upregulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"upregulation of zinc superoxide oxidoreductase","type":"related"}],"termid":"GO:1901671"}


id: PR:O74325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain-containing protein C1685.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.05","synonyms":[{"name":"Spom972h-SPBC1685.05","type":"exact"}],"termid":"PR:O74325"}


id: GO:0097382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a deoxynucleoside diphosphate + H2O = a deoxynucleotide + phosphate.","definition_xrefs":["GOC:pde"],"gene_count":0,"genotype_count":0,"name":"obsolete deoxynucleoside-diphosphatase activity (obsolete GO:0097382)","termid":"GO:0097382"}


id: PBO:0051761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 7","termid":"PBO:0051761"}


id: MONDO:0001121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membrane of the frontal sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinusitis","termid":"MONDO:0005961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontal sinusitis","secondary_identifiers":["MESH:D015522","SCTID:78737005","DOID:10791","UMLS:C0016735","MEDGEN:8919","NCIT:C34626"],"termid":"MONDO:0001121","xrefs":{"Monarch":{"xref_id":"0001121"}}}


id: GO:0140769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + tetradecanoyl-[ACP] = H+ + holo-[ACP] + N(6)-tetradecanoyl-L-lysyl-[protein].","definition_xrefs":["RHEA:70611","PMID:32461253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0018030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"ACP-dependent peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0140769"}


id: GO:0017032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + K+(out) = amino acid(in) + K+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:monoatomic cation symporter activity","termid":"GO:0005416"},{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"amino acid:potassium symporter activity","synonyms":[{"name":"potassium:amino acid symporter activity","type":"exact"}],"termid":"GO:0017032"}


id: PBO:0085559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing GATA family zinc finger motifs; involved in spore wall assembly; sequence similarity to GAT3, and the double mutant gat3 gat4 exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085559"}


id: GO:0046177
data:
  {"annotated_genes":["SJAG_00633","SJAG_03852"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79525,79884],"is_not":false,"summary":null,"term":"GO:0046177"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"D-gluconate metabolic process","termid":"GO:0019521"},{"relation_name":"is_a","term_name":"aldonic acid catabolic process","termid":"GO:0046176"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00633":null,"SJAG_03852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"D-gluconate catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLUCONSUPER-PWY"],"synonyms":[{"name":"D-gluconate breakdown","type":"exact"},{"name":"D-gluconate catabolism","type":"exact"},{"name":"D-gluconate degradation","type":"exact"}],"termid":"GO:0046177","terms_by_termid":{"GO:0046177":null}}


id: MONDO:0017806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"15q overgrowth syndrome is a rare partial autosomal trisomy/tetrasomy characterized by facial dysmorphism (long thin face, prominent forehead, down-slanting palpebral fissures, prominent nose with broad nasal bridge, prominent chin), pre- and postnatal overgrowth, renal anomalies (e.g. horseshoe kidney, renal agenesis, hydronephrosis), mild to severe learning difficulties and behavioral abnormalities. Additional features may include craniosynostosis and macrocephaly.","definition_xrefs":["Orphanet:314585"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 15","termid":"MONDO:0016965"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15q overgrowth syndrome","secondary_identifiers":["DECIPHER:81","UMLS:C4749920","GARD:17423","MEDGEN:1661769"],"synonyms":[{"name":"15q26 overgrowth syndrome","type":"exact"}],"termid":"MONDO:0017806","xrefs":{"Monarch":{"xref_id":"0017806"}}}


id: SO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a small temporal RNA (stRNA). Found in roundworm development.","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stRNA_encoding","synonyms":[{"name":"stRNA encoding","type":"exact"}],"termid":"SO:0000656"}


id: PBO:0003448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidyl-N-methylethanolamine N-methyltransferase (predicted)","termid":"PBO:0003448"}


id: PBO:0055110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2529","termid":"PBO:0055110"}


id: MONDO:0009340
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85995,85996],"is_not":false,"summary":null,"term":"MONDO:0009340"}]},"cv_name":"mondo","definition":"Nonspherocytic hemolytic anemia due to hexokinase deficiency (NSHA due to HK1 deficiency) is a very rare conditionmainly characterized by severe, chronic hemolysis, beginning in infancy. Approximately 20 cases of this condition have been described to date. Signs and symptoms of hexokinase deficiency are very similar to those of pyruvate kinase deficiency but anemia is generally more severe. Some affected individuals reportedly have had various abnormalities in addition to NSHA including multiple malformations, panmyelopathy, and latent diabetes.Itcan be caused by mutations in the HK1 gene and is inherited in an autosomal recessive manner. Treatment may include red cell transfusions for those with severe anemia.","definition_xrefs":["GARD:0003672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005570","MONDO:0002280","MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"non-spherocytic hemolytic anemia due to hexokinase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:90031","GARD:3672","MEDGEN:461693","OMIM:235700","UMLS:C3150343","MESH:C562995"],"synonyms":[{"name":"hemolytic anaemia due to hexokinase deficiency","type":"exact"},{"name":"hemolytic anemia due to hexokinase deficiency","type":"exact"},{"name":"hemolytic anemia, nonspherocytic, due to hexokinase deficiency","type":"related"},{"name":"hexokinase deficiency hemolytic anaemia","type":"related"},{"name":"hexokinase deficiency hemolytic anemia","type":"related"},{"name":"nonspherocytic hemolytic anaemia due to hexokinase deficiency","type":"related"},{"name":"nonspherocytic hemolytic anemia due to hexokinase deficiency","type":"related"}],"termid":"MONDO:0009340","terms_by_termid":{"MONDO:0009340":null},"xrefs":{"Monarch":{"xref_id":"0009340"}}}


id: GO:0048312
data:
  {"annotated_genes":["SJAG_01741","SJAG_04003","SJAG_00655"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106682,106891,110323],"is_not":false,"summary":null,"term":"GO:0048312"}]},"cv_name":"biological_process","definition":"Any process that establishes the spatial arrangement of mitochondria within the cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion distribution","termid":"GO:0048311"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00655":null,"SJAG_01741":null,"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intracellular distribution of mitochondria","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondria positioning within cell","type":"exact"},{"name":"mitochondrion positioning within cell","type":"exact"}],"termid":"GO:0048312","terms_by_termid":{"GO:0048312":null}}


id: GO:0031290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:ejs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal ganglion cell axon guidance","synonyms":[{"name":"retinal ganglion cell axon pathfinding","type":"exact"}],"termid":"GO:0031290"}


id: PBO:0028526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridine_biosynthesis","termid":"PBO:0028526"}


id: GO:0030153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates resistance to a bacteriocin: any of a heterogeneous group of polypeptide antibiotics that are secreted by certain bacterial strains and are able to kill cells of other susceptible (frequently related) strains after adsorption at specific receptors on the cell surface. They include the colicins, and their mechanisms of action vary.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"bacteriocin immunity","termid":"GO:0030153"}


id: PBO:0064059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 93","termid":"PBO:0064059"}


id: PBO:0079333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 19","termid":"PBO:0079333"}


id: PBO:0085929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mitochondrial-dependent role in the extension of chronological lifespan; overexpression increases oxygen consumption and respiratory activity while deletion results in reduced oxygen consumption under conditions of caloric restriction; induced by iron homeostasis transcription factor Aft2p; multicopy suppressor of temperature sensitive hsf1 mutant; induced by treatment with 8-methoxypsoralen and UVA irradiation","termid":"PBO:0085929"}


id: PBO:0082288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF-like small GTPase of the RAS superfamily; required for recruitment of Arl1p, a GTPase that regulates membrane traffic, to the Golgi apparatus; NatC-catalyzed N-terminal acetylation regulates Golgi membrane association mediated by interaction with membrane receptor, Sys1p; similar to ADP-ribosylation factor and orthologous to mammalian ARFRP1","termid":"PBO:0082288"}


id: PBO:0087356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor required for the first step of pre-mRNA splicing; binding to the spliceosome requires Prp2p and Yju2p; heat-stable protein; has similarity to S. pombe Cwf25p","termid":"PBO:0087356"}


id: GO:0006219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyuridine, 2-deoxyribosyluracil, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyuridine metabolic process","termid":"GO:0046096"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside catabolic process","termid":"GO:0046127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyuridine catabolic process","synonyms":[{"name":"deoxyuridine breakdown","type":"exact"},{"name":"deoxyuridine catabolism","type":"exact"},{"name":"deoxyuridine degradation","type":"exact"}],"termid":"GO:0006219"}


id: PBO:0047958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(22)(q13)","termid":"PBO:0047958"}


id: GO:0048537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of mucosal-associated lymphoid tissue over time, from its formation to the mature structure. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosa-associated lymphoid tissue development","synonyms":[{"name":"BALT development","type":"narrow"},{"name":"GALT development","type":"narrow"},{"name":"NALT development","type":"narrow"},{"name":"bronchial-associated lymphoid tissue development","type":"narrow"},{"name":"gut-associated lymphoid tissue development","type":"narrow"},{"name":"mucosal-associated lymphoid tissue development","type":"exact"},{"name":"nasopharyngeal-associated lymphoid tissue development","type":"narrow"}],"termid":"GO:0048537"}


id: MONDO:0000290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease involving the Naegleria fowleri.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary amebic meningoencephalitis","secondary_identifiers":["UMLS:C0300934","SCTID:721816008","GARD:9554","DOID:0050242","MEDGEN:81253","MESH:C535275"],"synonyms":[{"name":"Naegleria fowleri infection","type":"exact"},{"name":"infections, Naegleria fowleri","type":"related"}],"termid":"MONDO:0000290","xrefs":{"Monarch":{"xref_id":"0000290"}}}


id: MOD:01947
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-threonine residue and an L-aspartic acid residue with an ester bond to form  O-(L-isoaspartyl)-L-threonine.","definition_xrefs":["PubMed:17157318","PubMed:8706862","RESID:AA0525#TDX"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"O-(L-isoaspartyl)-L-threonine","termid":"MOD:01978"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoaspartyl)-L-threonine (cross-link)","synonyms":[{"name":"(2S)-2-amino-4-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-3-amino-3-carboxypropanoyl]oxy)propanoic acid","type":"exact"},{"name":"CROSSLNK isoaspartyl threonine ester (Thr-Asp)","type":"exact"},{"name":"O(beta)-(beta-aspartyl)threonine","type":"exact"},{"name":"O-(L-isoaspartyl)-L-threonine","type":"exact"},{"name":"O3-(isoaspartyl)-threonine","type":"exact"}],"termid":"MOD:01947"}


id: PBO:0046172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK1","termid":"PBO:0046172"}


id: MONDO:0032618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 13","secondary_identifiers":["OMIM:618235","UMLS:C4748770","DOID:0112076","GARD:18371","MEDGEN:1648370"],"synonyms":[{"name":"MC1DN13","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 13","type":"related"}],"termid":"MONDO:0032618","xrefs":{"Monarch":{"xref_id":"0032618"}}}


id: PR:O74555
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11208:SF6","PRO:DNx","OMA:SCHPO04361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchpoint-bridging protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.06c","secondary_identifiers":["UniProtKB:O74555"],"synonyms":[{"name":"Spom972h-SF1","type":"exact"},{"name":"splicing factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"zinc finger protein bpb1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74555"}


id: PBO:0084980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; reduces many aldehyde compounds including glycolaldehyde, formaldehyde and furfural; transcription unregulated by furfural, 5-hydroxymethylfurfural (HMF) and the mycotoxin patulin; expression increased by multidrug resistance transcription factors Yrm1p and Yrr1p; member of atypical subgroup 7 of the short-chain dehydrogenase/reductase (SDR) family; localizes to the cytoplasm; SWAT-GFP and mCherry fusion proteins localize to the ER and vacuole respectively","termid":"PBO:0084980"}


id: PBO:0109297
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon-optimization decreases protein concentration","termid":"PBO:0109297"}


id: PR:P07334
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P07334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inducer protein kinase cdr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.06c","synonyms":[{"name":"Spom972h-cdr1","type":"exact"},{"name":"protein kinase nim1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P07334"}


id: GO:0033490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, via the intermediate lathosterol.","definition_xrefs":["GOC:mah","MetaCyc:PWY66-341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol biosynthetic process","termid":"GO:0006695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cholesterol biosynthetic process via lathosterol","secondary_identifiers":["Reactome:R-HSA-6807062"],"synonyms":[{"name":"cholesterol anabolism via lathosterol","type":"exact"},{"name":"cholesterol biosynthesis via lathosterol","type":"exact"},{"name":"cholesterol formation via lathosterol","type":"exact"},{"name":"cholesterol synthesis via lathosterol","type":"exact"}],"termid":"GO:0033490"}


id: PBO:0081855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger family member 788, pseudogene","termid":"PBO:0081855"}


id: PBO:0070272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 7","termid":"PBO:0070272"}


id: PR:Q92462
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pub1 gene.","definition_xrefs":["UniProtKB:Q92462","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase pub1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.02","synonyms":[{"name":"Spom972h-pub1","type":"exact"}],"termid":"PR:Q92462"}


id: PATO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a teardrop.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bulbous","synonyms":[{"name":" bulblike","type":"exact"},{"name":"bulb-shaped","type":"exact"},{"name":"swollen","type":"related"}],"termid":"PATO:0002210"}


id: FYPO:0003157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the growing cell tip, but then remains there for a longer or shorter time than normal.","definition_xrefs":["PMID:24146635","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal maintenance of protein location at cell tip during vegetative growth","termid":"FYPO:0005464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal maintenance of protein location at growing cell tip","synonyms":[{"name":"abnormal maintenance of protein localization at growing cell tip","type":"exact"},{"name":"abnormal maintenance of protein location at growing cell end","type":"exact"},{"name":"abnormal maintenance of protein location at growing cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal maintenance of protein location at growing cell tip during vegetative growth","type":"exact"},{"name":"unstable protein localisation to growing cell tip","type":"exact"},{"name":"unstable protein localization to growing cell tip","type":"exact"}],"termid":"FYPO:0003157"}


id: PBO:0055992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and WD repeat domain containing 1","termid":"PBO:0055992"}


id: MONDO:0010235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-psychosis-macroorchidism syndrome","secondary_identifiers":["DOID:0060827","SCTID:702356009","MEDGEN:163232","OMIM:300055","GARD:3506","UMLS:C0796222","Orphanet:3077","ICD9:758.89"],"synonyms":[{"name":"Lindsay-Burn syndrome","type":"exact"},{"name":"MRXS13","type":"exact"},{"name":"PPM-X","type":"exact"},{"name":"PPM-X syndrome","type":"related"},{"name":"X-linked intellectual disability 79","type":"exact"},{"name":"X-linked intellectual disability with spasticity","type":"exact"},{"name":"X-linked mental retardation 79","type":"exact"},{"name":"X-linked mental retardation with spasticity","type":"exact"},{"name":"intellectual deficit, X-linked - psychosis - macroorchidism","type":"related"},{"name":"intellectual developmental disorder, X-linked, syndromic 13, X-linked recessive","type":"exact"},{"name":"intellectual disability psychosis macroorchidism","type":"related"},{"name":"intellectual disability with psychosis, pyramidal signs, and macroorchidism","type":"exact"},{"name":"intellectual disability, X-linked 16","type":"related"},{"name":"intellectual disability, X-linked 79","type":"related"},{"name":"intellectual disability, X-linked, syndromic 13","type":"exact"},{"name":"intellectual disability, X-linked, syndromic type 13","type":"exact"},{"name":"intellectual disability, X-linked, with spasticity","type":"related"},{"name":"mental retardation psychosis macroorchidism","type":"related"},{"name":"mental retardation with psychosis, pyramidal signs, and macroorchidism","type":"exact"},{"name":"mental retardation, X-linked 16","type":"related"},{"name":"mental retardation, X-linked 79","type":"related"},{"name":"mental retardation, X-linked, syndromic 13","type":"exact"},{"name":"mental retardation, X-linked, syndromic type 13","type":"exact"},{"name":"mental retardation, X-linked, with spasticity","type":"related"}],"termid":"MONDO:0010235","xrefs":{"Monarch":{"xref_id":"0010235"}}}


id: GO:0006788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the loss of electrons from one or more atoms in heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"},{"relation_name":"part_of","term_name":"porphyrin-containing compound catabolic process","termid":"GO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"part_of","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme oxidation","synonyms":[{"name":"haem oxidation","type":"exact"}],"termid":"GO:0006788"}


id: PBO:0040383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting accessory protein 1 like (pseudogene)","termid":"PBO:0040383"}


id: MONDO:0030964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 67","secondary_identifiers":["OMIM:619927","UMLS:C5677006","MEDGEN:1805690"],"synonyms":[{"name":"MRD67","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 67","type":"exact"},{"name":"mental retardation, autosomal dominant 67","type":"exact"}],"termid":"MONDO:0030964","xrefs":{"Monarch":{"xref_id":"0030964"}}}


id: PBO:0044493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 51 subfamily A member 1 pseudogene 1","termid":"PBO:0044493"}


id: PBO:0036200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubule_bundles_present_in_decreased_numbers_during_mitotic_interphase","termid":"PBO:0036200"}


id: PBO:0063472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 2","termid":"PBO:0063472"}


id: GO:0090211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of establishment of blood-brain barrier","termid":"GO:0090210"},{"relation_name":"positively_regulates","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of blood-brain barrier","synonyms":[{"name":"positive regulation of establishment of BBB","type":"exact"}],"termid":"GO:0090211"}


id: PBO:0041618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 4","termid":"PBO:0041618"}


id: PBO:0048215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit rho2","termid":"PBO:0048215"}


id: GO:0032655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-12 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-12 production","termid":"GO:0032615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-12 production","secondary_identifiers":["GO:2001182","GO:0045075"],"synonyms":[{"name":"regulation of CLMF production","type":"related"},{"name":"regulation of IL-12 production","type":"exact"},{"name":"regulation of NKSF production","type":"related"},{"name":"regulation of interleukin-12 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-12 secretion","type":"narrow"}],"termid":"GO:0032655"}


id: GO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a galactosylceramide = adenosine 3',5'-bisphosphate + a galactosylceramidesulfate.","definition_xrefs":["RHEA:20613","PMID:10727929","EC:2.8.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose 3-O-sulfotransferase activity","termid":"GO:0050694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"galactosylceramide sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-9844587","MetaCyc:GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenosine-5'-phosphosulfate-cerebroside sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:galactosylceramide 3'-sulfotransferase activity","type":"related"},{"name":"GSase","type":"related"},{"name":"cerebroside sulfotransferase activity","type":"exact"},{"name":"galactocerebroside sulfotransferase activity","type":"related"},{"name":"galactolipid sulfotransferase activity","type":"related"},{"name":"galactosylceramide sulphotransferase activity","type":"exact"},{"name":"glycolipid sulfotransferase activity","type":"related"},{"name":"glycosphingolipid sulfotransferase activity","type":"related"}],"termid":"GO:0001733"}


id: PBO:0075328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and oogenesis specific basic helix-loop-helix 1","termid":"PBO:0075328"}


id: PBO:0062588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 3","termid":"PBO:0062588"}


id: MONDO:0003224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spindle cell hemangioma (obsolete MONDO:0003224)","termid":"MONDO:0003224","xrefs":{"Monarch":{"xref_id":"0003224"}}}


id: GO:0100013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates fatty acid beta-oxidation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of fatty acid beta-oxidation by transcription from RNA polymerase II promoter (obsolete GO:0100013)","termid":"GO:0100013"}


id: GO:0030877
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic protein complex containing glycogen synthase kinase-3-beta (GSK-3-beta), the adenomatous polyposis coli protein (APC), and the scaffolding protein axin, among others; phosphorylates beta-catenin, targets it for degradation by the proteasome.","definition_xrefs":["PMID:14600025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"beta-catenin destruction complex","secondary_identifiers":["GO:0034742","GO:0034747"],"synonyms":[{"name":"23S APC complex","type":"narrow"},{"name":"APC-Axin-1-beta-catenin complex","type":"exact"},{"name":"Axin-APC-beta-catenin-GSK3B complex","type":"exact"},{"name":"BDC","type":"exact"},{"name":"beta-catenin degradation complex","type":"exact"}],"termid":"GO:0030877"}


id: PBO:0002211
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.31","termid":"PBO:0002211"}


id: GO:0019439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of aromatic compounds, any substance containing an aromatic carbon ring.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete aromatic compound catabolic process (obsolete GO:0019439)","termid":"GO:0019439"}


id: MONDO:0014912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"infantile-onset periodic fever-panniculitis-dermatosis syndrome","secondary_identifiers":["MEDGEN:934581","OMIM:617099","GARD:13198","Orphanet:500062","SCTID:765435009","UMLS:C4310614","DOID:0080163"],"synonyms":[{"name":"AIPDS","type":"exact"},{"name":"AUTOINFLAMMATION, panniculitis, and dermatosis syndrome","type":"related"},{"name":"Autoinflammation, panniculitis, and dermatosis syndrome","type":"exact"},{"name":"ORAS","type":"exact"},{"name":"autoinflammation, panniculitis and dermatosis syndrome","type":"exact"},{"name":"otulin deficiency","type":"exact"},{"name":"otulin-related autoinflammatory syndrome","type":"exact"},{"name":"otulipenia","type":"exact"}],"termid":"MONDO:0014912","xrefs":{"Monarch":{"xref_id":"0014912"}}}


id: PBO:0034339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_branching_part","termid":"PBO:0034339"}


id: MONDO:1011825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroid plexus tumour, non-human animal","secondary_identifiers":["OMIA:002403"],"termid":"MONDO:1011825","xrefs":{"Monarch":{"xref_id":"1011825"}}}


id: PBO:0036526
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jalili syndrome","termid":"PBO:0036526"}


id: PBO:0048234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 2E","termid":"PBO:0048234"}


id: PBO:0068937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 180, pseudogene","termid":"PBO:0068937"}


id: PATO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture that is uniformly covered in short, oblong, or trench-like depressions.","definition_xrefs":["Book:Book"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scrobiculate","termid":"PATO:0002294"}


id: GO:0047201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1-O-galloyl-beta-D-glucose = 1,6-bis-O-galloyl-beta-D-glucose + D-glucose.","definition_xrefs":["EC:2.3.1.90","RHEA:11416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"beta-glucogallin O-galloyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.90-RXN","KEGG_REACTION:R00049"],"synonyms":[{"name":"1-O-galloyl-beta-D-glucose:1-O-galloyl-beta-D-glucose O-galloyltransferase activity","type":"related"}],"termid":"GO:0047201"}


id: GO:0009071
data:
  {"annotated_genes":["SJAG_03641","SJAG_01271","SJAG_03861","SJAG_03290","SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[112472,86946,88187,95907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01271":null,"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"serine family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid breakdown","type":"exact"},{"name":"serine family amino acid catabolism","type":"exact"},{"name":"serine family amino acid degradation","type":"exact"}],"termid":"GO:0009071","terms_by_termid":{"GO:0006546":null,"GO:0019464":null}}


id: GO:0009001
data:
  {"annotated_genes":["SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101383],"is_not":false,"summary":null,"term":"GO:0009001"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + acetyl-CoA = O-acetyl-L-serine + CoA.","definition_xrefs":["RHEA:24560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine O-acyltransferase activity","termid":"GO:0016412"},{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"serine O-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.30","MetaCyc:SERINE-O-ACETTRAN-RXN","KEGG_REACTION:R00586"],"synonyms":[{"name":"L-serine acetyltransferase activity","type":"related"},{"name":"SATase activity","type":"related"},{"name":"acetyl-CoA:L-serine O-acetyltransferase activity","type":"related"},{"name":"serine acetyltransferase activity","type":"related"},{"name":"serine transacetylase activity","type":"related"}],"termid":"GO:0009001","terms_by_termid":{"GO:0009001":null}}


id: PBO:0005665
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.5.3","termid":"PBO:0005665"}


id: PBO:0043072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 1 subunit","termid":"PBO:0043072"}


id: MONDO:0036781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the structures of the axilla.","definition_xrefs":["NCIT:C35750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"axillary neoplasm","termid":"MONDO:0036779"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign axillary neoplasm","secondary_identifiers":["MEDGEN:146338","UMLS:C0684828"],"synonyms":[{"name":"axillary neoplasm, benign","type":"exact"},{"name":"benign axillary neoplasm","type":"exact"}],"termid":"MONDO:0036781","xrefs":{"Monarch":{"xref_id":"0036781"}}}


id: PBO:0030567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_alanine_level","termid":"PBO:0030567"}


id: GO:0120165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a perithecium over time, from its formation to the mature structure. Peritheicum is a flask-shaped fruiting body of certain molds and ascomycetous fungi having a pore for the escape of spores. In the ascomycetous fungi such as Neurospora crassa and Sordaria macrospora, these perithecia are formed in the sexual phase and they discharge ascospores through the ostiolum at the tip of the perithecial neck.","definition_xrefs":["PMID:25311923","PMID:125266","DOI:10.1007/978-3-642-00286-1_2","PMID:20739093","PMID:19547974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perithecium development","termid":"GO:0120165"}


id: GO:0021598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the abducens nerve is generated and organized. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"abducens nerve development","termid":"GO:0021560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve morphogenesis","synonyms":[{"name":"CN VI development","type":"related"}],"termid":"GO:0021598"}


id: SO:0001611
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An elongation of a polypeptide sequence at the N terminus deriving from a sequence variant extending the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"CDS_five_prime_extension","termid":"SO:0002228"},{"relation_name":"is_a","term_name":"elongated_polypeptide","termid":"SO:0001609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_polypeptide_N_terminal","synonyms":[{"name":"elongated polypeptide N terminal","type":"exact"}],"termid":"SO:0001611"}


id: MOD:01605
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl 2-aminoadipic acid.","definition_xrefs":["ChEBI:78503","PubMed:19620981","RESID:AA0502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl 2-aminoadipic acid","synonyms":[{"name":"(2S)-2-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanedioic acid","type":"exact"},{"name":"5-glutamyl 2-aminoadipic acid","type":"exact"},{"name":"MOD_RES 5-glutamyl 2-aminoadipic acid","type":"exact"},{"name":"N2-(gamma-glutamyl)-2-aminoadipic acid","type":"exact"},{"name":"N2-(isoglutamyl)-2-aminoadipic acid","type":"exact"}],"termid":"MOD:01605"}


id: MONDO:0010836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nanophthalmia","termid":"MONDO:0005514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nanophthalmos 1","secondary_identifiers":["GARD:18625","MESH:C563983","MEDGEN:325037","OMIM:600165","UMLS:C1838502"],"synonyms":[{"name":"NNO1","type":"exact"},{"name":"Nanophthalmia 1","type":"related"},{"name":"microphthalmos, simple, autosomal dominant","type":"related"},{"name":"nanophthalmos 1","type":"exact"},{"name":"nanophthalmos with high hyperopia and angle-closure glaucoma","type":"related"},{"name":"nanophthalmos, autosomal dominant","type":"related"},{"name":"nanophthalmos-1","type":"exact"}],"termid":"MONDO:0010836","xrefs":{"Monarch":{"xref_id":"0010836"}}}


id: MONDO:0001437
data:
  {"annotated_genes":["SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014206"}]},"cv_name":"mondo","definition":"A rare lung disorder characterized by the filling of the pulmonary alveoli with proteinaceous material which stains positive with periodic acid-Schiff stain. It may be idiopathic or secondary due to hematologic malignancies or the inhalation of mineral dusts. Signs and symptoms include dyspnea, cough and low grade fever.","definition_xrefs":["NCIT:C85037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01159":null},"genotype_count":0,"is_obsolete":false,"name":"pulmonary alveolar proteinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5400698","DOID:12120","NANDO:1200746","SCTID:10501004","ICD9:516.0","MESH:D011649","MEDGEN:1763046","icd11.foundation:1869739196"],"synonyms":[{"name":"PAP","type":"broad"},{"name":"pulmonary alveolar proteinosis","type":"exact"}],"termid":"MONDO:0001437","terms_by_termid":{"MONDO:0014206":null},"xrefs":{"Monarch":{"xref_id":"0001437"}}}


id: GO:0044045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance in the symbiont cell outer membrane - a lipid bilayer that forms the outermost layer of the symbiont cell envelope. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance in symbiont cell outer membrane (obsolete GO:0044045)","termid":"GO:0044045"}


id: GO:1904556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tryptophan across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:kmv","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan transport","termid":"GO:0015827"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-tryptophan transmembrane transport","termid":"GO:1904556"}


id: MONDO:0007459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilution, pigmentary","secondary_identifiers":["MEDGEN:406294","MESH:C566872","OMIM:126070","SCTID:23006000","UMLS:C1876214"],"synonyms":[{"name":"Albinoidism, oculocutaneous, autosomal dominant","type":"related"},{"name":"albinism, partial","type":"related"},{"name":"dilution, pigmentary","type":"exact"},{"name":"hypomelanotic disorder","type":"related"},{"name":"hypopigmentation","type":"related"}],"termid":"MONDO:0007459","xrefs":{"Monarch":{"xref_id":"0007459"}}}


id: GO:0090494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dopamine into a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine transport","termid":"GO:0015872"},{"relation_name":"is_a","term_name":"catecholamine uptake","termid":"GO:0090493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"dopamine uptake","termid":"GO:0090494"}


id: PBO:0061149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 1","termid":"PBO:0061149"}


id: PBO:0045519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"denticleless E3 ubiquitin protein ligase homolog","termid":"PBO:0045519"}


id: PBO:0084715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane m-AAA protease component; mediates degradation of misfolded or unassembled proteins; also required for correct assembly of mitochondrial enzyme complexes; involved in cytoplasmic mRNA translation and aging; expression of human homolog AFG3L2 can complement yeast yta12 afg3 double mutant","termid":"PBO:0084715"}


id: GO:0036028
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and thrombin (F2); formation of the complex inhibits the serine protease activity of thrombin.","definition_xrefs":["GOC:ans","PMID:6323392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein C inhibitor-thrombin complex","synonyms":[{"name":"PCI-thrombin complex","type":"exact"},{"name":"SERPINA5-thrombin complex","type":"exact"},{"name":"plasma serine protease inhibitor-thrombin complex","type":"exact"},{"name":"protein C inhibitor-F2 complex","type":"exact"},{"name":"protein C inhibitor-coagulation factor II complex","type":"exact"},{"name":"serpin A5-thrombin complex","type":"exact"}],"termid":"GO:0036028"}


id: PBO:0069492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 759, pseudogene","termid":"PBO:0069492"}


id: GO:0009825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size in two or three [spatial] dimensions or along two or three axes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multidimensional cell growth","synonyms":[{"name":"cell growth in three dimensions","type":"exact"},{"name":"cell growth in two dimensions","type":"narrow"}],"termid":"GO:0009825"}


id: PBO:0017080
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements human SLC35A2","termid":"PBO:0017080"}


id: PR:O42866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbonyl reductase family member 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01330","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.02","secondary_identifiers":["UniProtKB:O42866"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CBR4","type":"exact"}],"termid":"PR:O42866"}


id: GO:0004140
data:
  {"annotated_genes":["SJAG_04288","SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91732,114284],"is_not":false,"summary":null,"term":"GO:0004140"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-dephospho-CoA + ATP = ADP + CoA + 2 H+.","definition_xrefs":["EC:2.7.1.24","RHEA:18245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04288":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dephospho-CoA kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00130","MetaCyc:DEPHOSPHOCOAKIN-RXN","Reactome:R-HSA-196773","Reactome:R-HSA-9837337"],"synonyms":[{"name":"3'-dephospho-CoA kinase activity","type":"related"},{"name":"ATP:dephospho-CoA 3'-phosphotransferase activity","type":"related"},{"name":"dephosphocoenzyme A kinase (phosphorylating)","type":"related"},{"name":"dephosphocoenzyme A kinase activity","type":"related"}],"termid":"GO:0004140","terms_by_termid":{"GO:0004140":null}}


id: PBO:0068586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 37, pseudogene","termid":"PBO:0068586"}


id: PBO:0050722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 8","termid":"PBO:0050722"}


id: GO:0098973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic actin cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cytoskeleton","termid":"GO:0005200"},{"relation_name":"is_a","term_name":"structural constituent of postsynapse","termid":"GO:0099186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of postsynaptic actin cytoskeleton","termid":"GO:0098973"}


id: MONDO:0030707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"balanoposthitis","termid":"MONDO:0001618"},{"relation_name":"is_a","term_name":"trichomoniasis","termid":"MONDO:0002154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichomonas balanoposthitis","secondary_identifiers":["NCIT:C35406","UMLS:C0341769","MEDGEN:83327"],"synonyms":[{"name":"Trichomonas balanoposthitis","type":"exact"}],"termid":"MONDO:0030707","xrefs":{"Monarch":{"xref_id":"0030707"}}}


id: PBO:0053549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 556","termid":"PBO:0053549"}


id: FYPO:0001169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which proton (H+) transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal proton transport","synonyms":[{"name":"normal hydrogen ion transport","type":"exact"},{"name":"normal proton transmembrane transport","type":"exact"},{"name":"normal proton transport during mitotic cell cycle","type":"related"},{"name":"normal proton transport during vegetative growth","type":"exact"}],"termid":"FYPO:0001169"}


id: GO:0045848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nitrogen utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitrogen utilization","termid":"GO:0006808"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"positively_regulates","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitrogen utilization","synonyms":[{"name":"activation of nitrogen utilization","type":"narrow"},{"name":"stimulation of nitrogen utilization","type":"narrow"},{"name":"up regulation of nitrogen utilization","type":"exact"},{"name":"up-regulation of nitrogen utilization","type":"exact"},{"name":"upregulation of nitrogen utilization","type":"exact"}],"termid":"GO:0045848"}


id: GO:0033340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pelvic fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin development","termid":"GO:0033333"},{"relation_name":"is_a","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pelvic fin development","termid":"GO:0033340"}


id: PBO:0068902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 144, pseudogene","termid":"PBO:0068902"}


id: GO:0048109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl serine cross-link through a process of forming first an intermediate cysteine sulfenic acid by peroxide oxidation, followed by condensation with the alpha-amido of the following serine residue and the release of water.","definition_xrefs":["PMID:12802339","RESID:AA0344","PMID:12802338","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-amino-3-isothiazolidinone-L-serine (obsolete GO:0048109)","termid":"GO:0048109"}


id: PBO:0065494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 3","termid":"PBO:0065494"}


id: GO:1901422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a butan-1-ol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:24014527","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to butan-1-ol","secondary_identifiers":["GO:1990336"],"synonyms":[{"name":"process resulting in tolerance to butan-1-ol","type":"narrow"}],"termid":"GO:1901422"}


id: MOD:00774
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 243.02-243.03 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 243.02-243.03 Da","termid":"MOD:00774"}


id: GO:0062087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of vein smooth muscle contraction.","definition_xrefs":["PMID:8428203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vein smooth muscle contraction","termid":"GO:0062086"},{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle contraction","termid":"GO:1904695"},{"relation_name":"positively_regulates","term_name":"vein smooth muscle contraction","termid":"GO:0014826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vein smooth muscle contraction","termid":"GO:0062087"}


id: GO:1904305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gastro-intestinal system smooth muscle contraction.","definition_xrefs":["PMID:10821044","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"is_a","term_name":"regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904304"},{"relation_name":"negatively_regulates","term_name":"gastro-intestinal system smooth muscle contraction","termid":"GO:0014831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of gastro-intestinal system smooth muscle contraction","synonyms":[{"name":"down regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"down-regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"downregulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"inhibition of gastro-intestinal system smooth muscle contraction","type":"narrow"}],"termid":"GO:1904305"}


id: PBO:0078120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-2","termid":"PBO:0078120"}


id: PBO:0078747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 10B","termid":"PBO:0078747"}


id: PBO:0051070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-12","termid":"PBO:0051070"}


id: PBO:0078870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 4","termid":"PBO:0078870"}


id: PBO:0083465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MRPL38","termid":"PBO:0083465"}


id: PBO:0078950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 2-1","termid":"PBO:0078950"}


id: PBO:0068127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 434","termid":"PBO:0068127"}


id: PBO:0076374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1 (MAP3K7) binding protein 2","termid":"PBO:0076374"}


id: GO:0043519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly, arrangement of constituent parts, or disassembly of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of myosin II filament organization","synonyms":[{"name":"regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"regulation of myosin II filament organisation","type":"exact"}],"termid":"GO:0043519"}


id: GO:1903886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokine (C-C motif) ligand 20 production.","definition_xrefs":["GOC:krc","GO_REF:0000058","PMID:20054338","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 20 production","termid":"GO:1903884"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 20 production","termid":"GO:0036392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 20 production","synonyms":[{"name":"activation of C-C motif chemokine 20 production","type":"narrow"},{"name":"activation of CCL-20 production","type":"narrow"},{"name":"activation of CCL20 production","type":"narrow"},{"name":"activation of chemokine (C-C motif) ligand 20 production","type":"narrow"},{"name":"positive regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"positive regulation of CCL-20 production","type":"exact"},{"name":"positive regulation of CCL20 production","type":"exact"},{"name":"up regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"up regulation of CCL-20 production","type":"exact"},{"name":"up regulation of CCL20 production","type":"exact"},{"name":"up regulation of chemokine (C-C motif) ligand 20 production","type":"exact"},{"name":"up-regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"up-regulation of CCL-20 production","type":"exact"},{"name":"up-regulation of CCL20 production","type":"exact"},{"name":"up-regulation of chemokine (C-C motif) ligand 20 production","type":"exact"},{"name":"upregulation of C-C motif chemokine 20 production","type":"exact"},{"name":"upregulation of CCL-20 production","type":"exact"},{"name":"upregulation of CCL20 production","type":"exact"},{"name":"upregulation of chemokine (C-C motif) ligand 20 production","type":"exact"}],"termid":"GO:1903886"}


id: GO:0016165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate.","definition_xrefs":["EC:1.13.11.12","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"linoleate 13S-lipoxygenase activity","secondary_identifiers":["RHEA:22780","MetaCyc:LIPOXYGENASE-RXN"],"synonyms":[{"name":"carotene oxidase activity","type":"narrow"},{"name":"fat oxidase activity","type":"related"},{"name":"linoleate:oxygen 13-oxidoreductase activity","type":"related"},{"name":"lionoleate:O2 oxidoreductase activity","type":"related"},{"name":"lipoperoxidase activity","type":"related"},{"name":"lipoxidase activity","type":"related"},{"name":"lipoxydase activity","type":"related"},{"name":"lipoxygenase activity","type":"broad"}],"termid":"GO:0016165"}


id: PBO:0085539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9A has a paralog, RPS9B, that arose from the whole genome duplication","termid":"PBO:0085539"}


id: GO:0052125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis on or near host (obsolete GO:0052125)","termid":"GO:0052125"}


id: MONDO:1011843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal hydrocephalus, non-human animal","secondary_identifiers":["OMIA:000489"],"termid":"MONDO:1011843","xrefs":{"Monarch":{"xref_id":"1011843"}}}


id: PBO:0042634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 9 pseudogene","termid":"PBO:0042634"}


id: PBO:0078458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 10 (non-functional)","termid":"PBO:0078458"}


id: PBO:0050776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine (serotonin) oxygenase regulator","termid":"PBO:0050776"}


id: GO:0034662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains ezrin, Na+/H+ exchanger regulatory factor (NHERF, also called EBP50), and two copies of the cystic fibrosis transmembrane conductance regulator (CFTR). The CFTR molecules interact with NHERF via their cytoplasmic tail domains; the complex is thought to link the CFTR channel to the actin cytoskeleton and contribute to the regulation of channel activity.","definition_xrefs":["PMID:16926444","PMID:16798722","PMID:16129695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"CFTR-NHERF-ezrin complex","termid":"GO:0034662"}


id: GO:0051781
data:
  {"annotated_genes":["SJAG_04597","SJAG_00082","SJAG_04776","SJAG_05290","SJAG_00845","SJAG_01787","SJAG_03704","SJAG_02392","SJAG_01188","SJAG_02838","SJAG_01805","SJAG_03631","SJAG_01114","SJAG_03581","SJAG_00514","SJAG_03936","SJAG_04468","SJAG_04666","SJAG_03342"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89508,93917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[93918,87052,109975,94086,112803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[93304,89509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903490"},{"annotations":[110217,95359,103189,118986,90282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[114914,89380,106513,104650,105852,91927,112804,117331,88753,93305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[93921,87053,91928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"positively_regulates","term_name":"cell division","termid":"GO:0051301"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell division","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"activation of cell division","type":"narrow"},{"name":"stimulation of cell division","type":"narrow"},{"name":"up regulation of cell division","type":"exact"},{"name":"up-regulation of cell division","type":"exact"},{"name":"upregulation of cell division","type":"exact"}],"termid":"GO:0051781","terms_by_termid":{"GO:0140281":null,"GO:1903473":null,"GO:1903490":null,"GO:1903501":null,"GO:1903617":null,"GO:1905758":null}}


id: MONDO:0014578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the LRP4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 17","secondary_identifiers":["MEDGEN:895078","OMIM:616304","UMLS:C4225377","DOID:0110674","GARD:16080"],"synonyms":[{"name":"CMS17","type":"exact"},{"name":"LRP4 congenital myasthenic syndrome","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in LRP4","type":"exact"},{"name":"congenital myasthenic syndrome type 17","type":"exact"},{"name":"myasthenic syndrome, congenital, 17","type":"related"},{"name":"myasthenic syndrome, congenital, type 17","type":"exact"}],"termid":"MONDO:0014578","xrefs":{"Monarch":{"xref_id":"0014578"}}}


id: MONDO:0023071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"enterovirus infectious disease","termid":"MONDO:0005747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enterovirus antenatal infection","termid":"MONDO:0023071","xrefs":{"Monarch":{"xref_id":"0023071"}}}


id: GO:0038073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation and activation of a MAP kinase kinase (MAPKK), as part of a MAPK signaling cascade that contributes to cell wall biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase kinase activity involved in conjugation with cellular fusion (obsolete GO:0038073)","synonyms":[{"name":"MAP3K activity involved in conjugation with cellular fusion","type":"exact"},{"name":"MAPKKK activity involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0038073"}


id: GO:0002878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an acute inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of acute inflammatory response","termid":"GO:0002674"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to non-antigenic stimulus","termid":"GO:0002877"},{"relation_name":"negatively_regulates","term_name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acute inflammatory response to non-antigenic stimulus","synonyms":[{"name":"down regulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"down-regulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"downregulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"inhibition of acute inflammatory response to non-antigenic stimulus","type":"narrow"}],"termid":"GO:0002878"}


id: PBO:0085511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S13 and bacterial S15","termid":"PBO:0085511"}


id: PBO:0003884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carboxylic acid transporter (predicted)","termid":"PBO:0003884"}


id: PBO:0091582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosomal protein Rsm2202, fusion protein","termid":"PBO:0091582"}


id: MONDO:1011687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic neutropenia, non-human animal","secondary_identifiers":["OMIA:000248"],"termid":"MONDO:1011687","xrefs":{"Monarch":{"xref_id":"1011687"}}}


id: PBO:0038449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0038449"}


id: PBO:0088861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein, protein kinase inhibitor Nif1","termid":"PBO:0088861"}


id: MONDO:1010496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus venosus that occurs in gray wolf.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent ductus venosus, non-human animal","termid":"MONDO:1010023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus venosus, gray wolf","secondary_identifiers":["OMIA:001173-9612"],"termid":"MONDO:1010496","xrefs":{"Monarch":{"xref_id":"1010496"}}}


id: GO:0007345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Formation and development of an embryo and its organized structures.","definition_xrefs":["GOC:ems","ISBN:0070524300","ISBN:0140512888"],"gene_count":0,"genotype_count":0,"name":"obsolete embryogenesis and morphogenesis (obsolete GO:0007345)","synonyms":[{"name":"embryogenesis and morphogenesis","type":"exact"}],"termid":"GO:0007345"}


id: PBO:0018238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med11","termid":"PBO:0018238"}


id: GO:0010289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the pectidic homogalacturonan, characterized by a backbone of (1->4)-linked alpha-D-GalpA residues that can be methyl-esterified at C-6 and carry acetyl groups on O-2 and O-3.","definition_xrefs":["PMID:12913136","PMID:16540543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogalacturonan metabolic process","termid":"GO:0010394"},{"relation_name":"is_a","term_name":"cell wall pectin biosynthetic process","termid":"GO:0052325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"homogalacturonan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1061"],"termid":"GO:0010289"}


id: MONDO:0007250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly of fingers is a rare, genetic, non-syndromic, congenital limb malformation characterized by a painless, non-traumatic, non-neurogenic, often bilateral, permanent flexion contracture at the proximal interphalangeal joint of a postaxial finger, resulting in permanent volar inclination of the affected digit. The fifth finger is always involved, but additional digits might also be affected.","definition_xrefs":["Orphanet:295016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly of fingers","secondary_identifiers":["icd11.foundation:1449348512","ICD9:755.59","MESH:C536852","OMIM:114200","SCTID:29271008","GARD:9448","MEDGEN:416550","MESH:C567780","UMLS:C2751430"],"synonyms":[{"name":"CAMPD1","type":"related"},{"name":"camptodactyly 1","type":"related"},{"name":"camptodactyly and knuckle pads","type":"related"},{"name":"crooked little finger, familial","type":"related"},{"name":"familial streblodactyly","type":"related"},{"name":"minor streblomicrodactyly, familial","type":"related"},{"name":"streblodactyly","type":"related"}],"termid":"MONDO:0007250","xrefs":{"Monarch":{"xref_id":"0007250"}}}


id: SO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_acceptor_variant (SO:0001574) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_acceptor_variant","termid":"SO:0001574"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_acceptor_variant_NMD_triggering","synonyms":[{"name":"splice acceptor variant-NMD triggering","type":"exact"},{"name":"splice acceptor variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002327"}


id: PR:P40377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02759","PANTHER:PTHR11630:SF44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.04c","secondary_identifiers":["UniProtKB:P40377"],"synonyms":[{"name":"Spom972h-MCM2","type":"exact"},{"name":"cell division control protein 19 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"minichromosome maintenance protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40377"}


id: PBO:0111682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase/lipase implicated in lipid catobolism or detoxification","termid":"PBO:0111682"}


id: MONDO:0001431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease with basis in optic nerve damage secondary to a toxic substance and/or nutritional deficiency.","definition_xrefs":["Wikipedia:Toxic_and_nutritional_optic_neuropathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic neuritis","termid":"MONDO:0005885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"toxic or nutritional optic neuropathy","secondary_identifiers":["DOID:1209","SCTID:82108004","UMLS:C0155302","MEDGEN:509902","ICD9:377.33","ICD10CM:H46.2"],"synonyms":[{"name":"nutritional optic neuropathy","type":"broad"}],"termid":"MONDO:0001431","xrefs":{"Monarch":{"xref_id":"0001431"}}}


id: PR:Q96WW4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ivn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WW4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invasion protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.07c","synonyms":[{"name":"Spom972h-ivn1","type":"exact"}],"termid":"PR:Q96WW4"}


id: GO:0140027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the contractile vacuole to a specific location.","definition_xrefs":["PMID:19687255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"vacuolar localization","termid":"GO:1990849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"contractile vacuole localization","synonyms":[{"name":"establishment of contractile vacuole localization","type":"narrow"}],"termid":"GO:0140027"}


id: GO:0060636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0032953"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"negatively_regulates","term_name":"(1->3)-beta-D-glucan biosynthetic process","termid":"GO:0006075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of (1->3)-beta-D-glucan biosynthetic process","synonyms":[{"name":"negative regulation of 1,3-beta-D-glucan biosynthetic process","type":"exact"}],"termid":"GO:0060636"}


id: PBO:0087851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transaldolase of unknown function; transcription is repressed by Mot1p and induced by alpha-factor and during diauxic shift; NQM1 has a paralog, TAL1, that arose from the whole genome duplication","termid":"PBO:0087851"}


id: PBO:0040017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 6","termid":"PBO:0040017"}


id: GO:0042630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of deprivation of water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to water deprivation","synonyms":[{"name":"behavioral response to drought","type":"exact"},{"name":"behavioral response to thirst","type":"exact"},{"name":"behavioural response to water deprivation","type":"exact"}],"termid":"GO:0042630"}


id: GO:1903086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sinapate ester biosynthesis.","definition_xrefs":["GOC:TermGenie","PMID:11080161","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of sinapate ester biosynthetic process","termid":"GO:1903085"},{"relation_name":"negatively_regulates","term_name":"sinapate ester biosynthetic process","termid":"GO:0033525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sinapate ester biosynthetic process","synonyms":[{"name":"down regulation of sinapate ester anabolism","type":"exact"},{"name":"down regulation of sinapate ester biosynthesis","type":"exact"},{"name":"down regulation of sinapate ester biosynthetic process","type":"exact"},{"name":"down regulation of sinapate ester formation","type":"exact"},{"name":"down regulation of sinapate ester synthesis","type":"exact"},{"name":"down-regulation of sinapate ester anabolism","type":"exact"},{"name":"down-regulation of sinapate ester biosynthesis","type":"exact"},{"name":"down-regulation of sinapate ester biosynthetic process","type":"exact"},{"name":"down-regulation of sinapate ester formation","type":"exact"},{"name":"down-regulation of sinapate ester synthesis","type":"exact"},{"name":"downregulation of sinapate ester anabolism","type":"exact"},{"name":"downregulation of sinapate ester biosynthesis","type":"exact"},{"name":"downregulation of sinapate ester biosynthetic process","type":"exact"},{"name":"downregulation of sinapate ester formation","type":"exact"},{"name":"downregulation of sinapate ester synthesis","type":"exact"},{"name":"inhibition of sinapate ester anabolism","type":"narrow"},{"name":"inhibition of sinapate ester biosynthesis","type":"narrow"},{"name":"inhibition of sinapate ester biosynthetic process","type":"narrow"},{"name":"inhibition of sinapate ester formation","type":"narrow"},{"name":"inhibition of sinapate ester synthesis","type":"narrow"},{"name":"negative regulation of sinapate ester anabolism","type":"exact"},{"name":"negative regulation of sinapate ester biosynthesis","type":"exact"},{"name":"negative regulation of sinapate ester formation","type":"exact"},{"name":"negative regulation of sinapate ester synthesis","type":"exact"}],"termid":"GO:1903086"}


id: PBO:0028760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_nitric_oxide_level","termid":"PBO:0028760"}


id: MONDO:0957247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 22A, classic","secondary_identifiers":["DOID:0081354","MEDGEN:1841089","OMIM:620351","UMLS:C5830453"],"termid":"MONDO:0957247","xrefs":{"Monarch":{"xref_id":"0957247"}}}


id: PBO:0084618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metallothionein; binds copper and mediates resistance to high concentrations of copper and cadmium; locus is variably amplified in different strains, with two copies, CUP1-1 and CUP1-2, in the genomic sequence reference strain S288C; CUP1-2 has a paralog, CUP1-1, that arose from a segmental duplication","termid":"PBO:0084618"}


id: PBO:0041020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 3","termid":"PBO:0041020"}


id: PBO:0004883
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as cwc27 in error","termid":"PBO:0004883"}


id: FYPO:0007994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cohesion protection during anaphase of the first meiotic nuclear division is normal.","definition_xrefs":["PMID:18716626","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic sister chromatid cohesion","termid":"FYPO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic sister chromatid cohesion protection during meiotic anaphase I","termid":"FYPO:0007994"}


id: PBO:0088606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear bridge Ish domain protein Les1","termid":"PBO:0088606"}


id: GO:0002887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"negatively_regulates","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid leukocyte mediated immunity","synonyms":[{"name":"down regulation of myeloid leukocyte mediated immunity","type":"exact"},{"name":"down-regulation of myeloid leukocyte mediated immunity","type":"exact"},{"name":"downregulation of myeloid leukocyte mediated immunity","type":"exact"},{"name":"inhibition of myeloid leukocyte mediated immunity","type":"narrow"}],"termid":"GO:0002887"}


id: FYPO:0000943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by normal spore morphology, i.e. the size, shape, and structure of the spore are indistinguishable from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell morphology","termid":"FYPO:0000672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spore morphology","termid":"FYPO:0000943"}


id: FYPO:0007729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle is decreased during anaphase.","definition_xrefs":["PMID:16920624","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle","termid":"FYPO:0002825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle during anaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle during anaphase","type":"exact"},{"name":"decreased protein localization to elongating mitotic spindle","type":"related"},{"name":"decreased protein localization to mitotic spindle during anaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle during anaphase of mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle during mitotic anaphase","type":"exact"},{"name":"reduced protein localization to mitotic spindle during anaphase","type":"exact"}],"termid":"FYPO:0007729"}


id: GO:0018865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving acrylonitrile, a colorless, volatile liquid with a pungent odor. Acrylonitrile is used in the production of acrylic fibers, plastics, and synthetic rubbers.","definition_xrefs":["PMID:3830164","PMID:1390687"],"gene_count":0,"genotype_count":0,"name":"obsolete acrylonitrile metabolic process (obsolete GO:0018865)","synonyms":[{"name":"acrylonitrile metabolism","type":"broad"}],"termid":"GO:0018865"}


id: PBO:0000597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"export adaptor Nmd3 (predicted)","termid":"PBO:0000597"}


id: FYPO:0006176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin cortical patch localization is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased rate of actin cortical patch localization","synonyms":[{"name":"decreased rate of actin cortical patch localisation","type":"exact"},{"name":"decreased rate of actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin cortical patch localization during vegetative growth","type":"exact"},{"name":"decreased rate of actin cortical patch movement","type":"related"},{"name":"decreased rate of actin patch localization","type":"exact"},{"name":"reduced rate of actin cortical patch localization","type":"exact"}],"termid":"FYPO:0006176"}


id: GO:0043415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increase the rate of skeletal muscle regeneration.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue regeneration","termid":"GO:0043416"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"positively_regulates","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle tissue regeneration","synonyms":[{"name":"activation of skeletal muscle regeneration","type":"narrow"},{"name":"stimulation of skeletal muscle regeneration","type":"narrow"},{"name":"up regulation of skeletal muscle regeneration","type":"exact"},{"name":"up-regulation of skeletal muscle regeneration","type":"exact"},{"name":"upregulation of skeletal muscle regeneration","type":"exact"}],"termid":"GO:0043415"}


id: PBO:0064785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1F","termid":"PBO:0064785"}


id: GO:0046164
data:
  {"annotated_genes":["SJAG_04954","SJAG_04870","SJAG_00244","SJAG_00237","SJAG_04048","SJAG_03786","SJAG_04192","SJAG_04320"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[100356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006068"},{"annotations":[92568,115798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[88123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[88229,114488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[61212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[104518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_03786":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"alcohol catabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"alcohol breakdown","type":"exact"},{"name":"alcohol catabolism","type":"exact"},{"name":"alcohol degradation","type":"exact"}],"termid":"GO:0046164","terms_by_termid":{"GO:0006062":null,"GO:0006068":null,"GO:0016095":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null,"GO:0071545":null}}


id: PBO:0089166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family Rio2","termid":"PBO:0089166"}


id: GO:1904788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of induction of conjugation with cellular fusion.","definition_xrefs":["GOC:TermGenie","PMID:22144909","GO_REF:0000063"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of induction of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter (obsolete GO:1904788)","synonyms":[{"name":"positive regulation of induction of conjugation with cellular fusion by global transcription regulation from Pol II promoter","type":"related"},{"name":"positive regulation of induction of conjugation with cellular fusion by regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of induction of conjugation with cellular fusion by regulation of global transcription from Pol II promoter","type":"related"},{"name":"positive regulation of induction of conjugation with cellular fusion by regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of induction of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter, global","type":"related"}],"termid":"GO:1904788"}


id: PBO:0061906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optineurin","termid":"PBO:0061906"}


id: PBO:0052378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 21A","termid":"PBO:0052378"}


id: PBO:0075647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY4 intronic transcript 1","termid":"PBO:0075647"}


id: GO:0006521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amino acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of amino acid metabolic process","secondary_identifiers":["Reactome:R-HSA-350562"],"synonyms":[{"name":"regulation of amino acid metabolism","type":"exact"}],"termid":"GO:0006521"}


id: PBO:0046534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 3 member 1, envelope","termid":"PBO:0046534"}


