# terms

id: MONDO:0023543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Katsantoni-Papadakou-Lagoyanni syndrome","secondary_identifiers":["UMLS:C2931394","MEDGEN:419400","MESH:C537012"],"synonyms":[{"name":"Katsantoni Papadakou Lagoyanni syndrome","type":"related"},{"name":"Trichodermal syndrome and intellectual disability","type":"related"},{"name":"Trichodermal syndrome and mental retardation","type":"related"}],"termid":"MONDO:0023543","xrefs":{"Monarch":{"xref_id":"0023543"}}}


id: FYPO:0002050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which vegetative a cell is branched, elongated, has no septum, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated cell","termid":"FYPO:0001512"},{"relation_name":"is_a","term_name":"elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"branched elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"branched elongated multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"branched elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002050"}


id: PR:Q10181
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rit1 gene.","definition_xrefs":["UniProtKB:Q10181","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3F10.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.06c","synonyms":[{"name":"Spom972h-rit1","type":"exact"}],"termid":"PR:Q10181"}


id: FYPO:0005830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules is abnormal. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein transport along microtubule during vegetative growth","synonyms":[{"name":"abnormal protein movement along microtubule during vegetative growth","type":"exact"},{"name":"abnormal protein transport along microtubule during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005830"}


id: PBO:0085241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; plays a role in determining prion variants; binds to Hsp82p and contributes to chaperone activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0085241"}


id: MONDO:0015049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solitary necrotic tumor of the liver is a rare nonmalignant hepatic lesion characterized by a mass with a completely necrotic core often partially calcified, surrounded by a dense hyalinized fibrous capsule containing elastin fibers. Patients are usually asymptomatic but some may suffer from intermittent abdominal pain or discomfort.","definition_xrefs":["Orphanet:100035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"solitary necrotic nodule of the liver","secondary_identifiers":["GARD:19743","MEDGEN:755361","SCTID:447058001","UMLS:C2960192","icd11.foundation:209168589"],"synonyms":[{"name":"hepatic solitary necrotic nodule","type":"exact"}],"termid":"MONDO:0015049","xrefs":{"Monarch":{"xref_id":"0015049"}}}


id: PBO:0051801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing GTPase activating protein 3","termid":"PBO:0051801"}


id: GO:0018194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-alanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-alanine modification","termid":"GO:0018194"}


id: PBO:0082910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine desulphydrase, enables growth on cysteine as nitrogen source; involved in the production of thiols; null mutant displays increased levels of spontaneous Rad52p foci; expression induced by nitrogen limitation in a GLN3, GAT1-dependent manner and by copper levels in a Mac1-dependent manner","termid":"PBO:0082910"}


id: MONDO:0020552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Placental site trophoblastic tumor is a rare gestational trophoblastic tumor (GTT) which develops from the placental implantation site and always occurs following pregnancy, voluntary termination of pregnancy (VTP) or miscarriage.","definition_xrefs":["Orphanet:99928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"},{"relation_name":"is_a","term_name":"gestational trophoblastic neoplasm","termid":"MONDO:0018944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placental site trophoblastic tumor","secondary_identifiers":["DOID:3596","GARD:7403","ICDO:9104/1","EFO:1001111","MESH:D018245","NCIT:C3757","MEDGEN:104914","ONCOTREE:PSTT","SCTID:237252008","UMLS:C0206666"],"synonyms":[{"name":"PSST","type":"exact"},{"name":"placental site gestational trophoblastic tumor","type":"exact"},{"name":"placental site gestational trophoblastic tumour","type":"exact"},{"name":"placental site trophoblastic tumor","type":"exact"},{"name":"placental site trophoblastic tumor (morphologic abnormality)","type":"exact"},{"name":"placental site trophoblastic tumour (morphologic abnormality)","type":"exact"},{"name":"placental-site GTT","type":"exact"},{"name":"placental-site gestational trophoblastic neoplasm","type":"exact"},{"name":"placental-site gestational trophoblastic tumor","type":"exact"},{"name":"placental-site gestational trophoblastic tumour","type":"exact"}],"termid":"MONDO:0020552","xrefs":{"Monarch":{"xref_id":"0020552"}}}


id: GO:1901752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of leukotriene A4.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene catabolic process","termid":"GO:0036100"},{"relation_name":"is_a","term_name":"long-chain fatty acid catabolic process","termid":"GO:0042758"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"},{"relation_name":"is_a","term_name":"leukotriene A4 metabolic process","termid":"GO:1901751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene A4 catabolic process","synonyms":[{"name":"leukotriene A4 breakdown","type":"exact"},{"name":"leukotriene A4 catabolism","type":"exact"},{"name":"leukotriene A4 degradation","type":"exact"}],"termid":"GO:1901752"}


id: FYPO:0005131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to ethanol.","definition_xrefs":["PMID:24623719","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spores sensitive to ethanol","termid":"FYPO:0005131"}


id: MONDO:0013596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nonsyndromic congenital nail disorder 10 (obsolete MONDO:0013596)","secondary_identifiers":["OMIM:614157"],"termid":"MONDO:0013596","xrefs":{"Monarch":{"xref_id":"0013596"}}}


id: PBO:0067085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 121, pseudogene","termid":"PBO:0067085"}


id: GO:2000630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of miRNA metabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"positively_regulates","term_name":"miRNA metabolic process","termid":"GO:0010586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of miRNA metabolic process","synonyms":[{"name":"positive regulation of microRNA metabolic process","type":"exact"}],"termid":"GO:2000630"}


id: PBO:0069241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 496, pseudogene","termid":"PBO:0069241"}


id: GO:0000511
data:
  {"annotated_genes":["SJAG_02314","SJAG_00942","SJAG_02035","SJAG_03128","SJAG_02416"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97647,107568,110728,110729,113049,113050,116351],"is_not":false,"summary":null,"term":"GO:0000511"}]},"cv_name":"molecular_function","definition":"A histone chaperone that carries a H2A-H2B histone complex.","definition_xrefs":["PMID:28053344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone chaperone activity","termid":"GO:0140713"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00942":null,"SJAG_02035":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_03128":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140104","GO:0140597"],"is_obsolete":false,"name":"H2A-H2B histone complex chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H2A-H2B histone carrier activity","type":"exact"}],"termid":"GO:0000511","terms_by_termid":{"GO:0000511":null}}


id: MONDO:0957790
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85751],"is_not":false,"summary":null,"term":"MONDO:0957790"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"immune dysregulation, autoimmunity, and autoinflammation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1847968","OMIM:620514","UMLS:C5848750"],"termid":"MONDO:0957790","terms_by_termid":{"MONDO:0957790":null},"xrefs":{"Monarch":{"xref_id":"0957790"}}}


id: PBO:0041225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf21 divergent transcript","termid":"PBO:0041225"}


id: PBO:0063462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor D","termid":"PBO:0063462"}


id: PBO:0058508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5698","termid":"PBO:0058508"}


id: PBO:0070372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 10","termid":"PBO:0070372"}


id: PBO:0005802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0005802"}


id: PBO:0063280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 6","termid":"PBO:0063280"}


id: GO:0046536
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein or protein-RNA complex that localizes to one or more of the sex chromosome(s), where it acts to normalize transcription between different sexes.","definition_xrefs":["GOC:mah","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"},{"relation_name":"part_of","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"dosage compensation complex","termid":"GO:0046536"}


id: PBO:0039642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 associated regulatory protein","termid":"PBO:0039642"}


id: PBO:0053371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 294","termid":"PBO:0053371"}


id: MONDO:0010667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by intellectual deficit associated with facial dysmorphism, patella luxation, and abnormal growth of the teeth.","definition_xrefs":["Orphanet:2958"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prieto syndrome","secondary_identifiers":["DOID:0060805","MESH:C535274","OMIM:309610","GARD:4482","MEDGEN:374294","SCTID:719140001","UMLS:C1839730"],"synonyms":[{"name":"MRXS2","type":"related"},{"name":"PRS","type":"related"},{"name":"Prieto X-linked intellectual disability syndrome","type":"related"},{"name":"Prieto X-linked mental retardation syndrome","type":"related"},{"name":"Prieto syndrome, X-linked recessive","type":"exact"},{"name":"Prieto-Badia-Mulas syndrome","type":"exact"},{"name":"X-linked intellectual disability-dysmorphism-cerebral atrophy syndrome","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 2","type":"related"},{"name":"intellectual disability, X-linked, with Dysmorphism and cerebral atrophy","type":"related"},{"name":"mental retardation, X-linked, syndromic 2","type":"related"},{"name":"mental retardation, X-linked, with Dysmorphism and cerebral atrophy","type":"related"}],"termid":"MONDO:0010667","xrefs":{"Monarch":{"xref_id":"0010667"}}}


id: GO:1900980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phenazine biosynthetic process","synonyms":[{"name":"regulation of acridizine biosynthesis","type":"related"},{"name":"regulation of acridizine biosynthetic process","type":"related"},{"name":"regulation of azophenylene biosynthesis","type":"related"},{"name":"regulation of azophenylene biosynthetic process","type":"related"},{"name":"regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"regulation of dibenzopyrazine biosynthetic process","type":"related"}],"termid":"GO:1900980"}


id: PBO:0079936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream transcription factor 1 pseudogene 1","termid":"PBO:0079936"}


id: PBO:0076879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX28 pseudogene 3","termid":"PBO:0076879"}


id: PBO:0081868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 807, pseudogene","termid":"PBO:0081868"}


id: GO:0070748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-35 receptor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-35 receptor binding","synonyms":[{"name":"IL-35","type":"narrow"},{"name":"interleukin-35 receptor ligand","type":"narrow"}],"termid":"GO:0070748"}


id: MONDO:0014030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the CCDC114 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 20","secondary_identifiers":["UMLS:C3540844","GARD:15902","MEDGEN:761920","OMIM:615067","DOID:0110625"],"synonyms":[{"name":"CCDC114 primary ciliary dyskinesia","type":"exact"},{"name":"CILD20","type":"exact"},{"name":"ciliary dyskinesia, primary, 20","type":"related"},{"name":"ciliary dyskinesia, primary, 20, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 20","type":"exact"},{"name":"primary ciliary dyskinesia 20 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in CCDC114","type":"exact"},{"name":"primary ciliary dyskinesia type 20","type":"exact"}],"termid":"MONDO:0014030","xrefs":{"Monarch":{"xref_id":"0014030"}}}


id: MONDO:0008239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 4","secondary_identifiers":["UMLS:C1868356","OMIM:172110","MEDGEN:358301"],"synonyms":[{"name":"Pgm4","type":"related"},{"name":"milk PGM","type":"related"},{"name":"phosphoglucomutase 4","type":"exact"},{"name":"phosphoglucomutase type 4","type":"exact"}],"termid":"MONDO:0008239","xrefs":{"Monarch":{"xref_id":"0008239"}}}


id: PBO:0084012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen synthase; expression induced by glucose limitation, nitrogen starvation, environmental stress, and entry into stationary phase; GSY1 has a paralog, GSY2, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0084012"}


id: GO:0019396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid (3,4,5-trihydroxybenzoic acid).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"gallate catabolic process","secondary_identifiers":["GO:0018918","UM-BBD_pathwayID:gal"],"synonyms":[{"name":"gallate breakdown","type":"exact"},{"name":"gallate catabolism","type":"exact"},{"name":"gallate degradation","type":"exact"},{"name":"gallate metabolic process","type":"related"},{"name":"gallate metabolism","type":"related"},{"name":"gallic acid catabolic process","type":"exact"},{"name":"gallic acid catabolism","type":"exact"},{"name":"gallic acid metabolic process","type":"related"},{"name":"gallic acid metabolism","type":"related"}],"termid":"GO:0019396"}


id: PBO:0086953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of filamentous growth; interacts with FLO11 promoter and regulates FLO11 expression; binds to transcription factors Flo8p and Mss11p; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YDL233W is not an essential gene","termid":"PBO:0086953"}


id: PBO:0013743
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S pombe Heme Utilization","termid":"PBO:0013743"}


id: PBO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase (predicted)","termid":"PBO:0002234"}


id: PBO:0027143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_resistant_to_ionizing_radiation","termid":"PBO:0027143"}


id: PBO:0087236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Separase/separin, a caspase-like cysteine protease; cleaves Mcd1p/Scc1p, a mitotic cohesin complex subunit, resulting in the dissociation of cohesin from chromatin and sister chromatid separation; cleaves meiotic-cohesin subunit Rec8p along chromosome arms in meiosis I and at centromeric sites during meiosis II; inhibits PP2A-Cdc55p to promote mitotic exit; inhibited by Pds1p (securin); relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087236"}


id: GO:1904420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomeric loop formation.","definition_xrefs":["PMID:22579284","GO_REF:0000058","GOC:TermGenie","GOC:BHF_telomere","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomeric loop formation","termid":"GO:1904418"},{"relation_name":"positively_regulates","term_name":"telomeric loop formation","termid":"GO:0031627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"positive regulation of telomeric loop formation","synonyms":[{"name":"activation of t-loop biosynthesis","type":"narrow"},{"name":"activation of t-loop formation","type":"narrow"},{"name":"activation of telomeric loop formation","type":"narrow"},{"name":"positive regulation of t-loop biosynthesis","type":"exact"},{"name":"positive regulation of t-loop formation","type":"exact"},{"name":"up regulation of t-loop biosynthesis","type":"exact"},{"name":"up regulation of t-loop formation","type":"exact"},{"name":"up regulation of telomeric loop formation","type":"exact"},{"name":"up-regulation of t-loop biosynthesis","type":"exact"},{"name":"up-regulation of t-loop formation","type":"exact"},{"name":"up-regulation of telomeric loop formation","type":"exact"},{"name":"upregulation of t-loop biosynthesis","type":"exact"},{"name":"upregulation of t-loop formation","type":"exact"},{"name":"upregulation of telomeric loop formation","type":"exact"}],"termid":"GO:1904420"}


id: FYPO:0006510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which chromosome structure is abnormal at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology","termid":"FYPO:0006508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal telomere structure","synonyms":[{"name":"abnormal chromosome structure at telomere during vegetative growth","type":"exact"},{"name":"abnormal telomere structure during mitotic cell cycle","type":"related"},{"name":"abnormal telomeric region structure during vegetative growth","type":"exact"}],"termid":"FYPO:0006510"}


id: GO:1905411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitotic cohesin unloading.","definition_xrefs":["PMID:26687354","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitotic cohesin unloading (obsolete GO:1905411)","termid":"GO:1905411"}


id: GO:0034353
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91209],"is_not":false,"summary":null,"term":"GO:0034353"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a 5' terminal diphosphate from the 5'-triphosphate end of an mRNA, leaving a 5'-monophosphate end.","definition_xrefs":["GOC:jh2","PMID:17612492","PMID:18202662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"mRNA 5'-diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA pyrophosphohydrolase activity","type":"broad"}],"termid":"GO:0034353","terms_by_termid":{"GO:0034353":null}}


id: PBO:0017457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inheres_in","termid":"PBO:0017457"}


id: GO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the transition from the initiation to the elongation phases of transcription by a DNA-dependent RNA polymerase, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase and making contacts with elongation specific factors.","definition_xrefs":["GOC:txnOH","PMID:15020047","PMID:18280161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"promoter clearance during DNA-templated transcription","secondary_identifiers":["GO:0001122"],"synonyms":[{"name":"promoter clearance during DNA-dependent transcription","type":"exact"},{"name":"promoter clearance from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"promoter escape","type":"broad"}],"termid":"GO:0001109"}


id: MONDO:0019608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XX disorder of sex development induced by maternal-derived androgen (obsolete MONDO:0019608)","secondary_identifiers":["Orphanet:91144","icd11.foundation:293874628"],"synonyms":[{"name":"46,XX DSD induced by maternal-derived androgen","type":"exact"}],"termid":"MONDO:0019608","xrefs":{"Monarch":{"xref_id":"0019608"}}}


id: GO:0006449
data:
  {"annotated_genes":["SJAG_02812","SJAG_00642","SJAG_05265","SJAG_02189"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111165],"is_not":false,"summary":null,"term":"GO:0006449"},{"annotations":[108624,108625,94310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translational termination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"translational termination","termid":"GO:0006415"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00642":null,"SJAG_02189":null,"SJAG_02812":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational termination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006449","terms_by_termid":{"GO:0006449":null,"GO:0045905":null}}


id: SO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA that catalyzes its own cleavage.","direct_ancestors":[{"relation_name":"has_quality","term_name":"ribonuclease_site","termid":"SO:0001977"},{"relation_name":"is_a","term_name":"ribozyme","termid":"SO:0000374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"self_cleaving_ribozyme","synonyms":[{"name":"self cleaving ribozyme","type":"exact"}],"termid":"SO:0002231"}


id: GO:0045896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription during mitotic cell cycle (obsolete GO:0045896)","synonyms":[{"name":"mitotic regulation of transcription","type":"exact"},{"name":"regulation of transcription, mitotic","type":"exact"}],"termid":"GO:0045896"}


id: GO:0070318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that activates or increases the rate or extent of the transition from the G0 quiescent state to the G1 phase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G0 to G1 transition","termid":"GO:0070316"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"G0 to G1 transition","termid":"GO:0045023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of G0 to G1 transition","termid":"GO:0070318"}


id: GO:0102426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: myricetin 3-O-beta-D-glucopyranoside + UDP-alpha-D-glucose = myricetin 3-O-gentiobioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete myricetin-3-O-glucoside 1,6-glucosyltransferase activity (obsolete GO:0102426)","termid":"GO:0102426"}


id: GO:0048398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an intermediate mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"intermediate mesodermal cell fate commitment","termid":"GO:0048393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell fate specification","synonyms":[{"name":"intermediate mesoderm cell fate specification","type":"exact"}],"termid":"GO:0048398"}


id: FYPO:0000553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pseudohyphal growth is increased during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased pseudohyphal growth","termid":"FYPO:0003776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased pseudohyphal growth during cellular hyperosmotic response","secondary_identifiers":["FYPO:0000438"],"synonyms":[{"name":"increased filamentous growth during cellular hyperosmotic response","type":"broad"}],"termid":"FYPO:0000553"}


id: PBO:0017426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_integral_part","termid":"PBO:0017426"}


id: MONDO:0000779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Malus domestica.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete apple allergy (obsolete MONDO:0000779)","secondary_identifiers":["DOID:0060504"],"synonyms":[{"name":"Malus domestica allergic disease","type":"exact"},{"name":"Malus domestica caused allergic disease","type":"exact"},{"name":"Malus domestica fruit allergy","type":"exact"},{"name":"allergy of Malus domestica","type":"exact"}],"termid":"MONDO:0000779","xrefs":{"Monarch":{"xref_id":"0000779"}}}


id: MONDO:0005866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by Mycobacterium avium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycobacterium avium complex disease","secondary_identifiers":["MESH:D015270","DOID:2755","UMLS:C0026916","NCIT:C36197","SCTID:373436002","EFO:0007386","MEDGEN:6478","ICD9:031.8"],"synonyms":[{"name":"DMAC","type":"related"},{"name":"MAC disease","type":"exact"},{"name":"Mycobacterium avium Complex","type":"exact"},{"name":"Mycobacterium avium complex caused disease or disorder","type":"exact"},{"name":"Mycobacterium avium complex disease or disorder","type":"exact"},{"name":"Mycobacterium avium complex infectious disease","type":"exact"},{"name":"Mycobacterium avium infection","type":"exact"},{"name":"disseminated infection with mycobacterium avium complex","type":"related"},{"name":"infection due to Mycobacterium intracellulare","type":"exact"}],"termid":"MONDO:0005866","xrefs":{"Monarch":{"xref_id":"0005866"}}}


id: FYPO:0008274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which glutamate biosynthesis is abnormal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased glutamate biosynthesis","termid":"FYPO:0008274"}


id: MONDO:0700107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 19q13.11 deletion syndrome in which the distal region was deleted.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 19q13.11 deletion syndrome","termid":"MONDO:0013090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19q13.11 deletion syndrome, distal","secondary_identifiers":["OMIM:613026","UMLS:C4311048","MEDGEN:935015"],"termid":"MONDO:0700107","xrefs":{"Monarch":{"xref_id":"0700107"}}}


id: MONDO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma of the colon that has invaded into the submucosa.","definition_xrefs":["NCIT:C38760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenocarcinoma","termid":"MONDO:0002271"},{"relation_name":"is_a","term_name":"invasive carcinoma","termid":"MONDO:0040677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"submucosal invasive colon adenocarcinoma","secondary_identifiers":["UMLS:C1515024","DOID:3038","MEDGEN:271523"],"synonyms":[{"name":"submucosal invasive colon adenocarcinoma","type":"exact"}],"termid":"MONDO:0002496","xrefs":{"Monarch":{"xref_id":"0002496"}}}


id: GO:1900399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pyrimidine nucleotide biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide biosynthetic process","termid":"GO:0030810"},{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleotide biosynthetic process","termid":"GO:1900397"},{"relation_name":"positively_regulates","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyrimidine nucleotide biosynthetic process","synonyms":[{"name":"activation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"activation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"activation of pyrimidine nucleotide biosynthetic process","type":"narrow"},{"name":"activation of pyrimidine nucleotide formation","type":"exact"},{"name":"activation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"positive regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"positive regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"positive regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"positive regulation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"up regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"up regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"up regulation of pyrimidine nucleotide biosynthetic process","type":"exact"},{"name":"up regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"up regulation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"up-regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"up-regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"up-regulation of pyrimidine nucleotide biosynthetic process","type":"exact"},{"name":"up-regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"up-regulation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"upregulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"upregulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"upregulation of pyrimidine nucleotide biosynthetic process","type":"exact"},{"name":"upregulation of pyrimidine nucleotide formation","type":"exact"},{"name":"upregulation of pyrimidine nucleotide synthesis","type":"exact"}],"termid":"GO:1900399"}


id: PBO:0109373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 7","termid":"PBO:0109373"}


id: PBO:0067839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 141","termid":"PBO:0067839"}


id: PBO:0070692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 1","termid":"PBO:0070692"}


id: PBO:0088755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone Nap2","termid":"PBO:0088755"}


id: GO:0052066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The invasion by a symbiont of a host organism cell by utilizing the host phagocytosis mechanism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete entry of symbiont into host cell by promotion of host phagocytosis (obsolete GO:0052066)","synonyms":[{"name":"entry of organism into cell of other organism by promotion of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"entry of organism into cell of other organism by promotion of phagocytosis in other organism involved in symbiotic interaction","type":"related"},{"name":"entry of organism into host cell by promotion of host phagocytosis","type":"exact"},{"name":"penetration of organism into host cell by promotion of host phagocytosis","type":"exact"},{"name":"penetration of symbiont into host cell by promotion of host phagocytosis","type":"exact"}],"termid":"GO:0052066"}


id: PBO:0069149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 400, pseudogene","termid":"PBO:0069149"}


id: PBO:0108511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 and Rpd3L histone deacetylase complex subunit Sds3","termid":"PBO:0108511"}


id: PBO:0055498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2932","termid":"PBO:0055498"}


id: MONDO:0002453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes involving the vestibulocochlear nerve; brainstem; or central nervous system. When hearing loss is due to retrocochlear pathology, it is called retrocochlear hearing loss.","definition_xrefs":["MESH:D012181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrocochlear disease","secondary_identifiers":["UMLS:C0035352","DOID:2889","MEDGEN:11216"],"termid":"MONDO:0002453","xrefs":{"Monarch":{"xref_id":"0002453"}}}


id: GO:0036027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and urokinase-type plasminogen activator (PLAU); formation of the complex inhibits the serine protease activity of urokinase-type plasminogen activator.","definition_xrefs":["PMID:3501295","PMID:8536714","GOC:ans","PMID:10340997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein C inhibitor-PLAU complex","synonyms":[{"name":"PCI-PLAU complex","type":"exact"},{"name":"SERPINA5-PLAU complex","type":"exact"},{"name":"plasma serine protease inhibitor-PLAU complex","type":"exact"},{"name":"protein C inhibitor-U-plasminogen activator complex","type":"exact"},{"name":"protein C inhibitor-uPA complex","type":"exact"},{"name":"protein C inhibitor-urokinase-type plasminogen activator complex","type":"exact"},{"name":"serpin A5-PLAU complex","type":"exact"}],"termid":"GO:0036027"}


id: PBO:0058180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4474","termid":"PBO:0058180"}


id: GO:0050297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopa + O2 = 4-(L-alanin-3-yl)-2-hydroxy-cis,cis-muconate 6-semialdehyde + H+.","definition_xrefs":["RHEA:21220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"stizolobate synthase activity","secondary_identifiers":["MetaCyc:RXN-8460","EC:1.13.11.29"],"synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine:oxygen 4,5-oxidoreductase (recyclizing)","type":"related"},{"name":"DOPA dioxygenase activity","type":"exact"}],"termid":"GO:0050297"}


id: PBO:0083949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins; Ost3p is important for N-glycosylation of a subset of proteins including modification of Pmt2p at N131 and N403","termid":"PBO:0083949"}


id: MONDO:0005860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0005860 (obsolete MONDO:0005860)","termid":"MONDO:0005860","xrefs":{"Monarch":{"xref_id":"0005860"}}}


id: FYPO:0007195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mitochondria are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"large mitochondria","synonyms":[{"name":"enlarged mitochondria","type":"exact"},{"name":"large mitochondria during mitotic cell cycle","type":"related"},{"name":"large mitochondria during vegetative growth","type":"exact"}],"termid":"FYPO:0007195"}


id: MONDO:0012866
data:
  {"annotated_genes":["SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86570],"is_not":false,"summary":null,"term":"MONDO:0012866"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 35 is a rare form of hereditary spastic paraplegia characterized by childhood (exceptionally adolescent) onset of a complex phenotype presenting with lower limb (followed by upper limb) spasticity with hyperreflexia and extensor plantar responses, with additional manifestations including progressive dysarthria, dystonia, mild cognitive decline, extrapyramidal features, optic atrophy and seizures. White matter abnormalities and brain iron accumulation have also been observed on brain magnetic resonance imaging.","definition_xrefs":["Orphanet:171629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 35","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567311","OMIM:612319","UMLS:C3496228","DOID:0110786","SCTID:764688002","MEDGEN:501249","NANDO:1200541","GARD:10538"],"synonyms":[{"name":"FA2H hereditary spastic paraplegia","type":"exact"},{"name":"SPG35","type":"exact"},{"name":"autosomal recessive spastic paraplegia 35","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 35","type":"exact"},{"name":"hereditary spastic paraplegia 35","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in FA2H","type":"exact"},{"name":"hereditary spastic paraplegia type 35","type":"exact"},{"name":"leukodystrophy, dysmyelinating and spastic paraparesis with or without dystonia","type":"exact"},{"name":"leukodystrophy, dysmyelinating, and spastic paraparesis with or without dystonia","type":"related"},{"name":"spastic paraplegia 35, autosomal recessive","type":"related"}],"termid":"MONDO:0012866","terms_by_termid":{"MONDO:0012866":null},"xrefs":{"Monarch":{"xref_id":"0012866"}}}


id: GO:0044664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cellular process of the reversion of cells to their original cell type, occurring as part of the process of phenotypic switching. Phenotypic switching begins with changes in cell morphology and altered gene expression patterns and ends when the morphology of a population of cells has reverted back to the default state, accompanied by altered expression patterns.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete reversion of cell type to default state involved in phenotypic switching (obsolete GO:0044664)","termid":"GO:0044664"}


id: GO:0018946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organosilicons, organic compounds that contain silicon, in the presence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organosilicon metabolic process","termid":"GO:0018945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerobic organosilicon metabolic process","secondary_identifiers":["UM-BBD_pathwayID:osi"],"synonyms":[{"name":"aerobic organosilicon metabolism","type":"exact"},{"name":"aerobic organosilicone metabolic process","type":"exact"},{"name":"aerobic organosilicone metabolism","type":"exact"}],"termid":"GO:0018946"}


id: PBO:0089214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, meiotic Mug117","termid":"PBO:0089214"}


id: PBO:0111822
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAT repeat protein","termid":"PBO:0111822"}


id: PBO:0069416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 678, pseudogene","termid":"PBO:0069416"}


id: GO:0072414
data:
  {"annotated_genes":["SJAG_04140","SJAG_00082","SJAG_04332","SJAG_01805","SJAG_03048","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93307,101871,110654,89510,116122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[89515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[101883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[101884,94051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072455","GO:0072473"],"synonyms":[{"name":"mitotic G2/M transition checkpoint effector process","type":"related"},{"name":"mitotic cell cycle G1/S checkpoint effector process","type":"related"},{"name":"mitotic cell cycle checkpoint effector process","type":"exact"},{"name":"response to mitotic G2/M transition checkpoint signal","type":"related"},{"name":"response to mitotic cell cycle G1/S checkpoint signaling","type":"related"},{"name":"response to signal involved in mitotic G2/M transition checkpoint","type":"related"},{"name":"response to signal involved in mitotic cell cycle G1/S checkpoint","type":"related"},{"name":"response to signal involved in mitotic cell cycle checkpoint","type":"related"}],"termid":"GO:0072414","terms_by_termid":{"GO:0072435":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: GO:0097340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the activation of an inactive cysteine-type endopeptidase.","definition_xrefs":["PMID:20383739","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibition of cysteine-type endopeptidase activity (obsolete GO:0097340)","synonyms":[{"name":"inhibition of caspase activity","type":"narrow"},{"name":"prevention of caspase activity","type":"narrow"},{"name":"prevention of cysteine-type endopeptidase activity","type":"exact"}],"termid":"GO:0097340"}


id: GO:0070795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of conidiophore development, a process that leads to the formation of a conidiophore. The conidiophore is a specialized hypha that extends aerially from the growth substrate and bears conidia, or asexual spores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conidiophore development","termid":"GO:0070793"},{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"positively_regulates","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of conidiophore development","termid":"GO:0070795"}


id: GO:0062038
data:
  {"annotated_genes":["SJAG_00781","SJAG_01978","SJAG_03453","SJAG_00845","SJAG_02486"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87658,90360,103190,114068,115031],"is_not":false,"summary":null,"term":"GO:0062038"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a pheromone response MAPK cascade.","definition_xrefs":["PMID:9315645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"regulation of pheromone response MAPK cascade","termid":"GO:0180039"},{"relation_name":"positively_regulates","term_name":"pheromone response MAPK cascade","termid":"GO:0071507"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00781":null,"SJAG_00845":null,"SJAG_01978":null,"SJAG_02486":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pheromone response MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062038","terms_by_termid":{"GO:0062038":null}}


id: PBO:0086073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; periodically expressed during the yeast metabolic cycle; phosphorylated in vitro by the mitotic exit network (MEN) kinase complex, Dbf2p/Mob1p","termid":"PBO:0086073"}


id: PR:Q09921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F7.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F7.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.10","synonyms":[{"name":"Spom972h-SPAC1F7.10","type":"exact"}],"termid":"PR:Q09921"}


id: PBO:0074137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A2","termid":"PBO:0074137"}


id: MONDO:0100096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with severe acute respiratory syndrome coronavirus 2.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Orthocoronavirinae infectious disease","termid":"MONDO:0020753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COVID-19","secondary_identifiers":["DOID:0080600","ICD10CM:U07.1","MESH:D000086382","MEDGEN:1699653","icd11.foundation:1730556128","SCTID:840539006","UMLS:C5203670","MESH:C000657245"],"synonyms":[{"name":"2019 novel coronavirus","type":"related"},{"name":"2019 novel coronavirus infection","type":"exact"},{"name":"2019-nCoV","type":"related"},{"name":"2019-nCoV infection","type":"exact"},{"name":"SARS-CoV-2","type":"related"},{"name":"SARS-coronavirus 2","type":"related"},{"name":"beta-CoV","type":"related"},{"name":"beta-CoVs","type":"related"},{"name":"betacoronavirus","type":"related"},{"name":"coronavirus disease 2019","type":"exact"},{"name":"severe acute respiratory syndrome coronavirus 2","type":"related"},{"name":"severe acute respiratory syndrome coronavirus 2 infectious disease","type":"exact"},{"name":"β-CoV","type":"related"},{"name":"β-CoVs","type":"related"},{"name":"β-coronavirus","type":"related"}],"termid":"MONDO:0100096","xrefs":{"Monarch":{"xref_id":"0100096"}}}


id: MONDO:0019866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 5 is a rare chromosomal anomaly syndrome with a variable phenotype ranging from clinically normal to patients presenting intrauterine growth retardation, congenital heart anomalies (mainly ventricular septal defect), multiple dysmorphic features (e.g. hypertelorism, prominent nasal bridge) and other congenital anomalies (incl. eventration of diaphragm, agenesis of corpus callosum, cloverleaf skull, clinodactyly, anteriorly placed anus). Psychomotor development may be normal in spite of low growth parameters being associated.","definition_xrefs":["Orphanet:96060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 5 disorder","termid":"MONDO:0700012"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 5","secondary_identifiers":["SCTID:764629008","UMLS:C2931603","MESH:C537762","GARD:19301","MEDGEN:419849"],"synonyms":[{"name":"Mosaic trisomy chromosome 5","type":"exact"},{"name":"Mosaic trisomy type 5","type":"exact"},{"name":"trisomy 5 mosaicism","type":"exact"}],"termid":"MONDO:0019866","xrefs":{"Monarch":{"xref_id":"0019866"}}}


id: PBO:0089221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L5","termid":"PBO:0089221"}


id: PBO:0045755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin converting enzyme 2","termid":"PBO:0045755"}


id: GO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of an enzyme.","definition_xrefs":["GOC:jl","GOC:ebc","GOC:vw","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catalytic activity","secondary_identifiers":["GO:0048554"],"synonyms":[{"name":"activation of enzyme activity","type":"narrow"},{"name":"activation of metalloenzyme activity","type":"narrow"},{"name":"positive regulation of enzyme activity","type":"exact"},{"name":"positive regulation of metalloenzyme activity","type":"narrow"},{"name":"stimulation of enzyme activity","type":"narrow"},{"name":"stimulation of metalloenzyme activity","type":"narrow"},{"name":"up regulation of enzyme activity","type":"exact"},{"name":"up regulation of metalloenzyme activity","type":"narrow"},{"name":"up-regulation of enzyme activity","type":"exact"},{"name":"up-regulation of metalloenzyme activity","type":"narrow"},{"name":"upregulation of enzyme activity","type":"exact"},{"name":"upregulation of metalloenzyme activity","type":"narrow"}],"termid":"GO:0043085"}


id: MONDO:0016878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 16 disorder","termid":"MONDO:0700023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 16","secondary_identifiers":["MEDGEN:1826015","Orphanet:261826","UMLS:C5679657","GARD:20801"],"synonyms":[{"name":"partial deletion of chromosome type 16","type":"exact"},{"name":"partial monosomy of chromosome 16","type":"exact"}],"termid":"MONDO:0016878","xrefs":{"Monarch":{"xref_id":"0016878"}}}


id: SO:0000477
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is polycistronic.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000477 polycistronic_gene (obsolete SO:0000477)","termid":"SO:0000477"}


id: FYPO:0007788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of macroautophagy is increased.","definition_xrefs":["PMID:17121544","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased macroautophagy","termid":"FYPO:0000384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased macroautophagy during vegetative growth","synonyms":[{"name":"increased macroautophagy during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007788"}


id: MONDO:0006200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A uveal melanoma characterized by the presence of malignant large epithelioid melanocytes.","definition_xrefs":["NCIT:C35780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelioid cell melanoma","termid":"MONDO:0002973"},{"relation_name":"is_a","term_name":"uveal melanoma","termid":"MONDO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"epithelioid cell uveal melanoma","secondary_identifiers":["UMLS:C1333422","DOID:7040","MEDGEN:234223","EFO:1000244"],"synonyms":[{"name":"epithelioid cell melanoma of uvea","type":"exact"},{"name":"epithelioid cell uveal melanoma","type":"exact"},{"name":"uvea epithelioid cell melanoma","type":"exact"},{"name":"uveal epithelioid cell melanoma","type":"exact"}],"termid":"MONDO:0006200","xrefs":{"Monarch":{"xref_id":"0006200"}}}


id: MONDO:0100342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A grade III or grade IV glioma arising from the central nervous system. This category includes glioblastoma, anaplastic astrocytoma, anaplastic ependymoma, anaplastic oligodendroglioma, and anaplastic oligoastrocytoma.","definition_xrefs":["NCIT:C4822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"high grade malignant neoplasm","termid":"MONDO:0020665"},{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant glioma","secondary_identifiers":["ICDO:9380/3","DOID:3070","UMLS:C0555198","MEDGEN:107826","MedDRA:10018338"],"synonyms":[{"name":"glial cell tumor","type":"exact"},{"name":"glial cell tumour","type":"exact"},{"name":"glioma","type":"broad"},{"name":"glioma, malignant","type":"exact"},{"name":"high grade glioma","type":"exact"},{"name":"high-grade glioma","type":"exact"},{"name":"malignant glial neoplasm","type":"exact"},{"name":"malignant glial tumor","type":"exact"},{"name":"malignant glial tumour","type":"exact"},{"name":"malignant glioma","type":"exact"},{"name":"malignant neuroglial neoplasm","type":"exact"},{"name":"malignant neuroglial tumor","type":"exact"},{"name":"malignant neuroglial tumour","type":"exact"},{"name":"neuroglial tumor","type":"broad"},{"name":"neuroglial tumour","type":"broad"}],"termid":"MONDO:0100342","xrefs":{"Monarch":{"xref_id":"0100342"}}}


id: PBO:0089675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 catalytic subunit Sds21","termid":"PBO:0089675"}


id: MONDO:0700055
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012476"},{"annotations":[85365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013656"},{"annotations":[85342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013634"}]},"cv_name":"mondo","definition":"KIF1A-associated neurological disorder (KAND) encompasses a group of rare neurodegenerative conditions caused by variants in KIF1A","definition_xrefs":["PMID:3388045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"is_obsolete":false,"name":"KIF1A related neurological disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["PMID:37259299"],"synonyms":[{"name":"KAND","type":"exact"},{"name":"KIF1A neurological disorder","type":"exact"},{"name":"neurological disorder caused by mutation in KIF1A","type":"exact"},{"name":"neurological disorder caused by variation in KIF1A","type":"exact"}],"termid":"MONDO:0700055","terms_by_termid":{"MONDO:0012476":null,"MONDO:0013634":null,"MONDO:0013656":null},"xrefs":{"Monarch":{"xref_id":"0700055"}}}


id: FYPO:0006431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"enlarged mitotic spindle pole body","synonyms":[{"name":"enlarged mitotic SPB","type":"exact"},{"name":"enlarged spindle pole body during mitotic cell cycle","type":"exact"},{"name":"enlarged spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0006431"}


id: GO:0010057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of a trichoblast.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell fate specification","termid":"GO:0090628"},{"relation_name":"part_of","term_name":"trichoblast differentiation","termid":"GO:0010054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichoblast fate specification","termid":"GO:0010057"}


id: MONDO:0005124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leprosy is a chronic infectious disease affecting primarily the skin and peripheral nervous system.","definition_xrefs":["Orphanet:548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leprosy","secondary_identifiers":["ICD10CM:A30","MedDRA:10024229","MESH:D007918","NCIT:C84824","ICD9:030.8","MEDGEN:6049","ICD9:030","icd11.foundation:149072669","DOID:1024","EFO:0001054","SCTID:81004002","ICD9:030.9","NORD:1362","UMLS:C0023343","GARD:6886"],"synonyms":[{"name":"Hansen disease","type":"exact"},{"name":"Hansen's disease","type":"exact"},{"name":"Mycobacterium leprae caused disease or disorder","type":"exact"},{"name":"Mycobacterium leprae disease or disorder","type":"exact"},{"name":"Mycobacterium leprae infectious disease","type":"exact"}],"termid":"MONDO:0005124","xrefs":{"Monarch":{"xref_id":"0005124"}}}


id: PR:000050503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TOG/XMAP215 microtubule plus end tracking polymerase Dis1 that has been phosphorylated at the positions equivalent to Thr-279, Ser-293, Ser-300, Ser-551, Ser-556, and Ser-590 of the amino acid sequence represented by UniProtKB:Q09933. Example: UniProtKB:Q09933, Thr-279, MOD:00047|Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, MOD:00046.","definition_xrefs":["PomBase:VW","PMID:16920624","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1 (Schizosaccharomyces pombe)","termid":"PR:000050502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis1/Phos(T279,S293,S300,S551,S556,S590)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"PomBase_original_PRO_term_name: TOG/XMAP215 microtubule plus end tracking polymerase Dis1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-dis1/Phos:1","type":"exact"},{"name":"UniProtKB:Q09933, Thr-279, MOD:00047|Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, MOD:00046","type":"narrow"},{"name":"dis1/Phos(T279,S293,S300,S551,S556,S590)","type":"exact"}],"termid":"PR:000050503"}


id: PBO:0069603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 880, pseudogene","termid":"PBO:0069603"}


id: MONDO:0006709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumor or cancer of the common bile duct including the ampulla of vater and the sphincter of oddi.","definition_xrefs":["MESH:D003138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct disorder","termid":"MONDO:0002886"},{"relation_name":"is_a","term_name":"extrahepatic bile duct neoplasm","termid":"MONDO:0021385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"common bile duct neoplasm","secondary_identifiers":["UMLS:C0009442","SCTID:126857009","MEDGEN:3178","DOID:4608"],"synonyms":[{"name":"common bile duct neoplasm (disease)","type":"exact"},{"name":"common bile duct tumor","type":"exact"},{"name":"common bile duct tumour","type":"exact"},{"name":"neoplasm of common bile duct","type":"exact"},{"name":"tumor of common bile duct","type":"exact"},{"name":"tumour of common bile duct","type":"exact"}],"termid":"MONDO:0006709","xrefs":{"Monarch":{"xref_id":"0006709"}}}


id: PBO:0048444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 7","termid":"PBO:0048444"}


id: FYPO:0002018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain a detectable mitotic spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0000120"],"is_obsolete":false,"name":"mitotic spindle absent from cell","synonyms":[{"name":"absent mitotic spindle","type":"exact"},{"name":"mitotic spindle absent from cell during vegetative growth","type":"exact"},{"name":"spindle absent from cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002018"}


id: PBO:0060285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 2","termid":"PBO:0060285"}


id: GO:0000212
data:
  {"annotated_genes":["SJAG_01215","SJAG_03915","SJAG_03073","SJAG_01760","SJAG_04745","SJAG_01805","SJAG_04901","SJAG_01546","SJAG_02529","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108310],"is_not":false,"summary":null,"term":"GO:0000212"},{"annotations":[96270,94275,98723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090306"},{"annotations":[100922],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051232"},{"annotations":[98724,100923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140642"},{"annotations":[93300,114567],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990395"},{"annotations":[96374,113373,90806],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a meiotic cell cycle.","definition_xrefs":["GOC:go_curators","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01760":null,"SJAG_01805":null,"SJAG_02529":null,"SJAG_03073":null,"SJAG_03915":null,"SJAG_04745":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"meiotic spindle organization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043147"],"synonyms":[{"name":"meiotic spindle organisation","type":"exact"},{"name":"meiotic spindle organization and biogenesis","type":"related"},{"name":"meiotic spindle stabilization","type":"related"},{"name":"spindle organization during meiosis","type":"exact"}],"termid":"GO:0000212","terms_by_termid":{"GO:0000212":null,"GO:0051232":null,"GO:0090306":null,"GO:0140642":null,"GO:1902441":null,"GO:1990395":null}}


id: GO:0060649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland bud grows along its axis.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"mammary gland bud morphogenesis","termid":"GO:0060648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland bud elongation","termid":"GO:0060649"}


id: GO:1900727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of osmoregulated periplasmic glucan.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"osmoregulated periplasmic glucan metabolic process","termid":"GO:1900725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"osmoregulated periplasmic glucan biosynthetic process","synonyms":[{"name":"osmoregulated periplasmic glucan anabolism","type":"exact"},{"name":"osmoregulated periplasmic glucan biosynthesis","type":"exact"},{"name":"osmoregulated periplasmic glucan formation","type":"exact"},{"name":"osmoregulated periplasmic glucan synthesis","type":"exact"}],"termid":"GO:1900727"}


id: PR:O13948
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H4.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H4.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.05c","synonyms":[{"name":"Spom972h-SPAC23H4.05c","type":"exact"}],"termid":"PR:O13948"}


id: PBO:0085400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein involved in maintaining membrane organization; involved in maintaining organization during stress conditions; induced by heat shock, oxidative stress, osmostress, stationary phase, glucose depletion, oleate and alcohol; protein abundance increased in response to DNA replication stress and dietary restriction; regulated by the HOG and Ras-Pka pathways; required for dietary restriction-induced lifespan extension","termid":"PBO:0085400"}


id: PBO:0084828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for outer membrane protein import; cooperates with Tom70p to import the subset of proteins with multiple alpha-helical transmembrane segments, including Ugo1p, Tom20p, and others; forms a complex with Mim2p in the outer membrane that functions as cation-selective channel for translocation of positively charged precursor segments; also has a role in assembly of Tom20p into the TOM complex","termid":"PBO:0084828"}


id: GO:0042868
data:
  {"annotated_genes":["SJAG_01176","SJAG_03680","SJAG_03745","SJAG_03047","SJAG_01717","SJAG_00266","SJAG_02621","SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107435],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060195"},{"annotations":[101898,105735,91755,109937,113430,117528,87888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01176":null,"SJAG_01717":null,"SJAG_02621":null,"SJAG_03047":null,"SJAG_03680":null,"SJAG_03745":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antisense RNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"antisense RNA metabolism","type":"exact"}],"termid":"GO:0042868","terms_by_termid":{"GO:0060195":null,"GO:0071040":null}}


id: GO:1990779
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane signaling receptor complex found exclusively on platelets. Involved in haemostasis and thrombosis where it aids blood coagulation.","definition_xrefs":["PMID:25297919","GOC:bhm","PMID:1730602","PMID:23336709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein complex","termid":"GO:0090665"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"glycoprotein Ib-IX-V complex","synonyms":[{"name":"CD42","type":"exact"},{"name":"GPIb-IX-V complex","type":"exact"},{"name":"GPIb-V-IX complex","type":"exact"}],"termid":"GO:1990779"}


id: GO:0033978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphonopyruvate + H2O = H+ + phosphate + pyruvate.","definition_xrefs":["RHEA:16673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-phosphorus bonds","termid":"GO:0016827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphonopyruvate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R08200","EC:3.11.1.3","MetaCyc:3.11.1.3-RXN"],"synonyms":[{"name":"PPH","type":"related"}],"termid":"GO:0033978"}


id: GO:0031599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The regulatory subcomplex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle (obsolete GO:0031599)","termid":"GO:0031599"}


id: PBO:0085834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery; protein abundance increases in response to DNA replication stress; has potential orthologs in Saccharomyces species and in Yarrowia lipolytica","termid":"PBO:0085834"}


id: PBO:0041309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 49","termid":"PBO:0041309"}


id: GO:1990554
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100846],"is_not":false,"summary":null,"term":"GO:1990554"}]},"cv_name":"biological_process","definition":"The process in which 3'-phospho-5'-adenylyl sulfate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:24296033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-phospho-5'-adenylyl sulfate transmembrane transport","termid":"GO:1902559"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"mitochondrial 3'-phospho-5'-adenylyl sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990554","terms_by_termid":{"GO:1990554":null}}


id: PATO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An accumulation which is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"accumulation","termid":"PATO:0002269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased accumulation","termid":"PATO:0002271"}


id: PBO:0065807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3A, member RAS oncogene family","termid":"PBO:0065807"}


id: PBO:0078109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator of GLUT4 (SLC2A4) 1","termid":"PBO:0078109"}


id: GO:0005221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when intracellular cyclic nucleotide has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"cyclic nucleotide-activated monoatomic ion channel activity","termid":"GO:0043855"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","secondary_identifiers":["Reactome:R-HSA-2514867"],"synonyms":[{"name":"intracellular cyclic nucleotide activated cation channel activity","type":"broad"},{"name":"intracellular cyclic nucleotide activated monoatomic cation channel activity","type":"exact"},{"name":"intracellular cyclic nucleotide-activated monoatomic cation channel activity","type":"exact"}],"termid":"GO:0005221"}


id: PBO:0057691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1281","termid":"PBO:0057691"}


id: GO:0097454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Small finger-like extension of a Schwann cell that contacts the nodal membrane.","definition_xrefs":["NIF_Subcellular:sao1890444066","PMID:15988042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus","termid":"GO:0005902"},{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schwann cell microvillus","termid":"GO:0097454"}


id: FYPO:0000837
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118973],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in any part of interphase. Includes normal and abnormal occurrences of arrest.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle arrest phenotype","termid":"FYPO:0004040"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest in mitotic interphase","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle arrest in interphase during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest in mitotic interphase during vegetative growth","type":"exact"},{"name":"interphase block","type":"related"},{"name":"mitotic cell cycle arrest in interphase","type":"exact"},{"name":"mitotic interphase cell cycle arrest","type":"exact"}],"termid":"FYPO:0000837","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0039644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit beta 1","termid":"PBO:0039644"}


id: GO:0005294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a neutral L-amino acid from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"neutral L-amino acid secondary active transmembrane transporter activity","synonyms":[{"name":"neutral L-amino acid porter activity","type":"related"}],"termid":"GO:0005294"}


id: GO:0021897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an astrocyte that resides in the forebrain, from initial commitment of the cell to its fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte development","termid":"GO:0014002"},{"relation_name":"part_of","term_name":"forebrain astrocyte differentiation","termid":"GO:0021896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain astrocyte development","termid":"GO:0021897"}


id: PBO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase (predicted)","termid":"PBO:0002196"}


id: GO:0043116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the extent to which blood vessels can be pervaded by fluid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular permeability","termid":"GO:0043114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular permeability","synonyms":[{"name":"down regulation of vascular permeability","type":"exact"},{"name":"down-regulation of vascular permeability","type":"exact"},{"name":"downregulation of vascular permeability","type":"exact"},{"name":"inhibition of vascular permeability","type":"narrow"}],"termid":"GO:0043116"}


id: PBO:0079642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 13","termid":"PBO:0079642"}


id: PBO:0068198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 505","termid":"PBO:0068198"}


id: PBO:0113497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4G and scaffold protein; subunit of the mRNA cap-binding protein complex (eIF4F) with eIF4E (Cdc33p) and eIF4A (Tif1p/Tif2p); stimulates the ATPase and helicase activities of eIF4A synergistically with eIF4G; required with eIF4E for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; association with Pab1p mediates poly(A) tail-stimulated translation; role in assembly of PET region in biogenesis of 60S ribosomal subunit","termid":"PBO:0113497"}


id: PBO:0017513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconate transmembrane transporter inducer Gti1","termid":"PBO:0017513"}


id: PBO:0059044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMS19 homolog, cytosolic iron-sulfur assembly component","termid":"PBO:0059044"}


id: PBO:0060137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melatonin receptor 1A","termid":"PBO:0060137"}


id: FYPO:0002401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more microtubule bundles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"microtubule bundles present in increased numbers","synonyms":[{"name":"extra microtubule bundles","type":"exact"},{"name":"increased level of MT bundles","type":"exact"},{"name":"increased microtubule bundling","type":"related"},{"name":"increased number of microtubule bundles","type":"exact"},{"name":"microtubule arrays present in increased numbers","type":"related"},{"name":"microtubule bundles present in greater numbers","type":"exact"}],"termid":"FYPO:0002401"}


id: PBO:0054693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2102","termid":"PBO:0054693"}


id: GO:0062243
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double membrane vesicle viral factory membrane","termid":"GO:0062242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory outer membrane","synonyms":[{"name":"outer membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062243"}


id: PBO:0078131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 12-2","termid":"PBO:0078131"}


id: PBO:0030690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_pheromone","termid":"PBO:0030690"}


id: MONDO:1011365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urinary system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary system disorder, non-human animal","termid":"MONDO:1011365","xrefs":{"Monarch":{"xref_id":"1011365"}}}


id: GO:0043496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.","definition_xrefs":["GOC:jl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein homodimerization activity","termid":"GO:0043496"}


id: PBO:0072358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 44","termid":"PBO:0072358"}


id: MONDO:1011426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctionalis epidermolysis bullosa that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, non-human animal","termid":"MONDO:1010129"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctionalis epidermolysis bullosa , non-human animal","secondary_identifiers":["OMIA:000342"],"termid":"MONDO:1011426","xrefs":{"Monarch":{"xref_id":"1011426"}}}


id: PBO:0081941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger HIT-type containing 6","termid":"PBO:0081941"}


id: PBO:NCBI Taxonomy id
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase organism property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxon_id","termid":"PBO:NCBI Taxonomy id"}


id: GO:0015578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mannose from one side of a membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"mannose transmembrane transporter activity","secondary_identifiers":["GO:0015589"],"synonyms":[{"name":"mannose permease activity","type":"exact"}],"termid":"GO:0015578"}


id: PBO:0089428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe Mug125 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0089428"}


id: PBO:0072355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 41","termid":"PBO:0072355"}


id: PBO:0060567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 3","termid":"PBO:0060567"}


id: MONDO:0011593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"},{"relation_name":"is_a","term_name":"PRRT2-associated paroxysmal movement disorder","termid":"MONDO:0100556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial infantile, 2","secondary_identifiers":["MEDGEN:381313","OMIM:605751","UMLS:C1853995","GARD:16504","MESH:C565296","DOID:0081115"],"synonyms":[{"name":"BFIS2","type":"related"},{"name":"convulsions, benign familial infantile, 2","type":"related"},{"name":"seizures, benign familial infantile, 2","type":"exact"},{"name":"seizures, benign familial infantile, type 2","type":"exact"}],"termid":"MONDO:0011593","xrefs":{"Monarch":{"xref_id":"0011593"}}}


id: FYPO:0001970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased when cells are grown in medium containing aculeacin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity during growth on aculeacin A","termid":"FYPO:0001970"}


id: PBO:0080461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 5","termid":"PBO:0080461"}


id: MONDO:1012395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rupture of the cranial cruciate ligament, non-human animal","termid":"MONDO:1011960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rupture of the cranial cruciate ligament, dog","secondary_identifiers":["OMIA:001474-9615"],"termid":"MONDO:1012395","xrefs":{"Monarch":{"xref_id":"1012395"}}}


id: GO:0090609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms of the same species aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:tb","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species biofilm formation","termid":"GO:0044010"},{"relation_name":"is_a","term_name":"submerged biofilm formation","termid":"GO:0090605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species submerged biofilm formation","termid":"GO:0090609"}


id: GO:0060764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the mammary gland, from its initial state to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in mammary gland development","synonyms":[{"name":"cell-cell signalling involved in mammary gland development","type":"exact"}],"termid":"GO:0060764"}


id: GO:0034914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trinitrophenol hydride Meisenheimer complex = 2,4-dinitrophenol + nitrite. Trinitrophenol is also known as TNP.","definition_xrefs":["UM-BBD_reactionID:r1448"],"gene_count":0,"genotype_count":0,"name":"obsolete trinitrophenol hydride denitratase activity (obsolete GO:0034914)","synonyms":[{"name":"2,4,6-trinitrophenol hydride denitratase activity","type":"exact"},{"name":"TNP hydride denitratase activity","type":"exact"}],"termid":"GO:0034914"}


id: MONDO:0003480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dysgerminoma (disease) that involves the pineal body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pineal area germ cell neoplasm","termid":"MONDO:0002073"},{"relation_name":"is_a","term_name":"dysgerminoma","termid":"MONDO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal region dysgerminoma","secondary_identifiers":["DOID:5510","UMLS:C1335415","MEDGEN:233328","NCIT:C7169"],"synonyms":[{"name":"pineal body dysgerminoma (disease)","type":"exact"},{"name":"pineal dysgerminoma","type":"exact"},{"name":"pineal region dysgerminoma","type":"exact"}],"termid":"MONDO:0003480","xrefs":{"Monarch":{"xref_id":"0003480"}}}


id: GO:0090420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving naphthalene-containing compounds.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene-containing compound metabolic process (obsolete GO:0090420)","termid":"GO:0090420"}


id: PBO:0063822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH domain and leucine rich repeat protein phosphatase 1","termid":"PBO:0063822"}


id: PBO:0064018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 52","termid":"PBO:0064018"}


id: GO:0052461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity (obsolete GO:0052461)","synonyms":[{"name":"modulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity","type":"exact"}],"termid":"GO:0052461"}


id: PBO:0076860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 10","termid":"PBO:0076860"}


id: MONDO:0009666
data:
  {"annotated_genes":["SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85808],"is_not":false,"summary":null,"term":"MONDO:0009666"}]},"cv_name":"mondo","definition":"A rare, early-onset and life-threatening, multiple carboxylase deficiency that when left untreated, is characterized by vomiting, tachypnea, irritability, lethargy, exfoliative dermatitis, and seizures that can worsen to coma and death.","definition_xrefs":["Orphanet:79242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"multiple carboxylase deficiency","termid":"MONDO:0015454"},{"relation_name":"is_a","term_name":"inborn disorder of branched-chain amino acid metabolism","termid":"MONDO:0019242"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"holocarboxylase synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:859","GARD:2721","MESH:D028922","NCIT:C98842","ICD9:270.8","NANDO:1200821","SCTID:15307001","OMIM:253270","UMLS:C0268581","MEDGEN:120653","SCTID:360369003"],"synonyms":[{"name":"HLCS deficiency","type":"related"},{"name":"biotin-(propionyl-CoA-carboxylase) ligase deficiency","type":"exact"},{"name":"early-onset multiple carboxylase deficiency","type":"exact"},{"name":"holocarboxylase synthase deficiency","type":"exact"},{"name":"holocarboxylase synthetase deficiency","type":"exact"},{"name":"multiple carboxylase deficiency","type":"broad"},{"name":"multiple carboxylase deficiency - neonatal onset","type":"exact"},{"name":"multiple carboxylase deficiency, early onset","type":"related"},{"name":"multiple carboxylase deficiency, neonatal form","type":"related"},{"name":"neonatal multiple carboxylase deficiency","type":"exact"}],"termid":"MONDO:0009666","terms_by_termid":{"MONDO:0009666":null},"xrefs":{"Monarch":{"xref_id":"0009666"}}}


id: PBO:0110199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitocondrial and nuclear tRNA (guanine-N2-)-methyltransferase Trm1.2","termid":"PBO:0110199"}


id: MONDO:0025556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"allergic asthma","termid":"MONDO:0004784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"isocyanate induced asthma","secondary_identifiers":["SCTID:404808000","UMLS:C1321273","ICD9:506.3","MEDGEN:729881","DOID:0040041"],"synonyms":[{"name":"isocyanates allergic asthma","type":"related"}],"termid":"MONDO:0025556","xrefs":{"Monarch":{"xref_id":"0025556"}}}


id: MONDO:0000447
data:
  {"annotated_genes":["SJAG_01950","SJAG_03535","SJAG_00175"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008265"},{"annotations":[85595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014860"},{"annotations":[84633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054743"}]},"cv_name":"mondo","definition":"An autosomal dominant inherited condition characterized by many cysts of various sizes scattered throughout the liver.","definition_xrefs":["GARD:0009457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_01950":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0000426","MONDO:0004335"],"is_obsolete":false,"name":"autosomal dominant polycystic liver disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:423904268","MedDRA:10048834","HP:0006557","GARD:9457","ICD10CM:Q44.6","SCTID:72925005","DOID:0050770","OMIMPS:174050","UMLS:C0158683","MEDGEN:56388","Orphanet:2924","icd11.foundation:1361740083","ICD9:751.62","MedDRA:10010427","NCIT:C82833","MedDRA:10083939"],"synonyms":[{"name":"AD polycystic liver disease","type":"exact"},{"name":"ADPLD","type":"exact"},{"name":"PCLD","type":"exact"},{"name":"congenital cystic liver disease","type":"related"},{"name":"congenital hepatic cyst","type":"related"},{"name":"fibrocystic liver disease","type":"related"},{"name":"isolated congenital polycystic liver disease","type":"exact"},{"name":"isolated polycystic liver disease","type":"exact"},{"name":"polycystic liver disease","type":"exact"}],"termid":"MONDO:0000447","terms_by_termid":{"MONDO:0008265":null,"MONDO:0014860":null,"MONDO:0054743":null},"xrefs":{"Monarch":{"xref_id":"0000447"}}}


id: PBO:0073332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 7 pseudogene 1","termid":"PBO:0073332"}


id: MONDO:0009717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic neuromuscular disease characterized by permanent myotonia, mask-like facies (with blepharospasm, narrow palpebral fissures, small mouth with pursed lips and puckered chin) , and chondrodysplasia (variably manifesting with short stature, pectus carinatum, kyphoscoliosis, bowing of long bones, epiphyseal, metaphyseal, and hip dysplasia).","definition_xrefs":["Orphanet:800"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of perlecan","termid":"MONDO:0016151"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"Schwartz-Jampel syndrome","secondary_identifiers":["icd11.foundation:1725668060","NANDO:2200876","NANDO:1200224","GARD:250","MEDGEN:19892","NORD:1697","SCTID:29145002","UMLS:C0036391","NANDO:2100235","ICD9:759.89","NCIT:C35008"],"synonyms":[{"name":"Aberfeld syndrome","type":"exact"},{"name":"Catel-Hempel syndrome","type":"exact"},{"name":"Catel-Hempel type dysostosis enchondralis metaepiphysaria","type":"exact"},{"name":"Osteochondromuscular dystrophy","type":"exact"},{"name":"SJS","type":"exact"},{"name":"Schwartz Jampel Aberfeld syndrome","type":"related"},{"name":"Schwartz Jampel Syndrome","type":"exact"},{"name":"Schwartz Jampel syndrome","type":"related"},{"name":"Schwartz-Jampel syndrome","type":"exact"},{"name":"Schwartz-Jampel-Aberfeld syndrome","type":"exact"},{"name":"burton skeletal dysplasia","type":"exact"},{"name":"burton syndrome","type":"exact"},{"name":"dysostosis enchondralis metaepiphysaria, Catel-Hempel type","type":"exact"},{"name":"myotonic chondrodystrophy","type":"exact"},{"name":"myotonic myopathy dwarfism chondrodystrophy and ocular and facial abnormalities","type":"related"},{"name":"myotonic myopathy, dwarfism, chondrodystrophy, and ocular and Facial abnormalities","type":"related"},{"name":"myotonic myopathy, dwarfism, chondrodystrophy, ocular and facial anomalies","type":"exact"},{"name":"osteochondromuscular dystrophy","type":"exact"}],"termid":"MONDO:0009717","xrefs":{"Monarch":{"xref_id":"0009717"}}}


id: PBO:0060905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 6","termid":"PBO:0060905"}


id: GO:0034026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + an L-amino acid + an L-amino acid = ADP + phosphate + L-aminoacyl-L-amino acid.","definition_xrefs":["EC:6.3.2.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"L-amino-acid alpha-ligase activity","secondary_identifiers":["RHEA:44332","MetaCyc:RXN-16296"],"synonyms":[{"name":"L-amino acid alpha-ligase activity","type":"exact"},{"name":"L-amino acid ligase activity","type":"exact"},{"name":"YwfE","type":"related"},{"name":"bacilysin synthetase activity","type":"exact"}],"termid":"GO:0034026"}


id: PBO:0003903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar copper transporter Ctr6","termid":"PBO:0003903"}


id: FYPO:0004419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is abolished, and the protein is instead present in the nucleus at a greater level than normal.","definition_xrefs":["PomBase:al","PMID:17362205","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to cytoplasm with increased protein localization to nucleus","synonyms":[{"name":"abolished protein localisation to cytoplasm with increased protein localisation to nucleus","type":"related"},{"name":"abolished protein localization to cytoplasm with increased protein localization to nucleus during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cytoplasm with increased protein localization to nucleus during vegetative growth","type":"exact"},{"name":"protein localization to cytoplasm abolished with increased protein localization to nucleus","type":"exact"}],"termid":"FYPO:0004419"}


id: MONDO:0009246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Friedreich ataxia and congenital glaucoma","secondary_identifiers":["UMLS:C1856688","MEDGEN:344787","MESH:C538061","OMIM:229310"],"synonyms":[{"name":"Friedreich ataxia and congenital glaucoma","type":"exact"}],"termid":"MONDO:0009246","xrefs":{"Monarch":{"xref_id":"0009246"}}}


id: PR:Q92356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle-associated membrane protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01364","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptobrevin homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.11","secondary_identifiers":["UniProtKB:Q92356"],"synonyms":[{"name":"Spom972h-VAMP4","type":"exact"}],"termid":"PR:Q92356"}


id: PBO:0065127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, DNA-activated, catalytic subunit","termid":"PBO:0065127"}


id: PBO:0018233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 assembly protein","termid":"PBO:0018233"}


id: GO:1905689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of diacylglycerol kinase activity.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:23091060","GOC:bc","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of diacylglycerol kinase activity (obsolete GO:1905689)","synonyms":[{"name":"activation of 1,2-diacylglycerol kinase (phosphorylating)","type":"narrow"},{"name":"activation of 1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"activation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"activation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"activation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"activation of DG kinase activity","type":"narrow"},{"name":"activation of DGK activity","type":"narrow"},{"name":"activation of arachidonoyl-specific diacylglycerol kinase activity","type":"narrow"},{"name":"activation of diacylglycerol kinase activity","type":"narrow"},{"name":"activation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"activation of diglyceride kinase activity","type":"narrow"},{"name":"activation of sn-1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"positive regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"positive regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"positive regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"positive regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"positive regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"positive regulation of DG kinase activity","type":"exact"},{"name":"positive regulation of DGK activity","type":"exact"},{"name":"positive regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"positive regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"positive regulation of diglyceride kinase activity","type":"exact"},{"name":"positive regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"up regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"up regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"up regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"up regulation of DG kinase activity","type":"exact"},{"name":"up regulation of DGK activity","type":"exact"},{"name":"up regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"up regulation of diglyceride kinase activity","type":"exact"},{"name":"up regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"up-regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"up-regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"up-regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"up-regulation of DG kinase activity","type":"exact"},{"name":"up-regulation of DGK activity","type":"exact"},{"name":"up-regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"up-regulation of diglyceride kinase activity","type":"exact"},{"name":"up-regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"upregulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"upregulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"upregulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"upregulation of DG kinase activity","type":"exact"},{"name":"upregulation of DGK activity","type":"exact"},{"name":"upregulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"upregulation of diglyceride kinase activity","type":"exact"},{"name":"upregulation of sn-1,2-diacylglycerol kinase activity","type":"exact"}],"termid":"GO:1905689"}


id: MONDO:1011624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xanthinuria that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthinuria, non-human animal","termid":"MONDO:1011450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthinuria, domestic cat","secondary_identifiers":["OMIA:001283-9685"],"termid":"MONDO:1011624","xrefs":{"Monarch":{"xref_id":"1011624"}}}


id: PR:O42859
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 28S ribosomal protein S14, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.07c","secondary_identifiers":["UniProtKB:O42859"],"synonyms":[{"name":"Spom972h-MRPS14","type":"exact"}],"termid":"PR:O42859"}


id: PBO:0066865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 165","termid":"PBO:0066865"}


id: PBO:0078737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 1","termid":"PBO:0078737"}


id: MONDO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastric linitis plastica (gastric LP) is a malignant, diffuse, infiltrative gastric adenocarcinoma.","definition_xrefs":["Orphanet:36273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse gastric adenocarcinoma","termid":"MONDO:0005017"},{"relation_name":"is_a","term_name":"cancer-related condition","termid":"MONDO:0045054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric linitis plastica","secondary_identifiers":["NCIT:C3190","MEDGEN:928895","DOID:4023","ICDO:8142/3","GARD:18822","MESH:D008039","UMLS:C4303226","SCTID:721629005"],"synonyms":[{"name":"Borrmann gastric cancer type 4","type":"exact"},{"name":"leather-bottle stomach","type":"exact"},{"name":"linitis plastica","type":"exact"},{"name":"linitis plastica (morphologic abnormality)","type":"exact"},{"name":"linitis plastica of the stomach","type":"exact"}],"termid":"MONDO:0018184","xrefs":{"Monarch":{"xref_id":"0018184"}}}


id: PBO:0087947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF-4B; RNA recognition motif containing single-stranded RNA binding protein that possesses RNA annealing and strand-exchange activities; stimulates the ATPase and unwinding activities of the RNA helicase eIF4A, in a synergistic manner with eIF4G; promotes assembly of the translation initiation factor complex eIF4F and the 48S preinitiation complex; interacts with Rps20p at the head of the 40S ribosomal subunit and alters the structure of the mRNA entry channel","termid":"PBO:0087947"}


id: PBO:0067162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 215, pseudogene","termid":"PBO:0067162"}


id: PBO:0071022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 24","termid":"PBO:0071022"}


id: PBO:0089685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box protein","termid":"PBO:0089685"}


id: PATO:0000870
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000870 relative neurobehavioral function value (obsolete PATO:0000870)","termid":"PATO:0000870"}


id: PBO:0077170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 2 pseudogene 1","termid":"PBO:0077170"}


id: MONDO:0033565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 9","secondary_identifiers":["OMIM:619011","MEDGEN:1724427","GARD:18499","UMLS:C5436599"],"synonyms":[{"name":"OOCYTE MATURATION DEFECT 9","type":"related"},{"name":"OOMD9","type":"related"}],"termid":"MONDO:0033565","xrefs":{"Monarch":{"xref_id":"0033565"}}}


id: GO:1900428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth","termid":"GO:0010570"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"}


id: RO:0002255
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has developmental contribution from","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_succeeded_by","termid":"RO:0002286"},{"relation_name":"is_a","term_name":"has_potential_to_developmentally_contribute_to","termid":"RO:0002385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_contributes_to","termid":"RO:0002255"}


id: GO:0046175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aldonic acid, a monocarboxylic acid with a chain of three or more carbon atoms, derived from an aldose by oxidation of the aldehydic group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"aldonic acid biosynthetic process","synonyms":[{"name":"aldonic acid anabolism","type":"exact"},{"name":"aldonic acid biosynthesis","type":"exact"},{"name":"aldonic acid formation","type":"exact"},{"name":"aldonic acid synthesis","type":"exact"}],"termid":"GO:0046175"}


id: PATO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001085 absolute acceleration value (obsolete PATO:0001085)","termid":"PATO:0001085"}


id: GO:0046003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the syncytial blastoderm mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytial blastoderm mitotic cell cycle","termid":"GO:0007348"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle, embryonic","termid":"GO:0045976"},{"relation_name":"negatively_regulates","term_name":"syncytial blastoderm mitotic cell cycle","termid":"GO:0035186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of syncytial blastoderm mitotic cell cycle","synonyms":[{"name":"down regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through syncytial blastoderm mitotic cell cycle","type":"narrow"},{"name":"negative regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"negative regulation of syncytial blastoderm cell cycle progression","type":"exact"}],"termid":"GO:0046003"}


id: PBO:0043342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride nucleotide-sensitive channel 1A pseudogene 1","termid":"PBO:0043342"}


id: PBO:0072782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAE1 pseudogene 1","termid":"PBO:0072782"}


id: PBO:0053743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 970","termid":"PBO:0053743"}


id: PR:O74343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pseudouridylate synthase 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13326:SF0","OMA:SCHPO03082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase C1A4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.09","secondary_identifiers":["UniProtKB:O74343"],"synonyms":[{"name":"Spom972h-PUS7","type":"exact"}],"termid":"PR:O74343"}


id: PBO:0089147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L17","termid":"PBO:0089147"}


id: FYPO:0006190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is longer than normal during anaphase A.","definition_xrefs":["PomBase:mah","PMID:12426374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle during anaphase","termid":"FYPO:0004438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000120","FYPO:0001320"],"is_obsolete":false,"name":"long mitotic spindle during anaphase A","synonyms":[{"name":"elongated mitotic spindle during anaphase A","type":"exact"},{"name":"increased mitotic spindle length during anaphase A","type":"exact"},{"name":"long bipolar mitotic spindle during anaphase A","type":"exact"},{"name":"long mitotic spindle during anaphase A during vegetative growth","type":"exact"},{"name":"long mitotic spindles during anaphase A","type":"exact"},{"name":"long spindle during anaphase A of mitosis","type":"exact"},{"name":"long spindle during mitotic anaphase A","type":"exact"}],"termid":"FYPO:0006190"}


id: PBO:0002639
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.3.4","termid":"PBO:0002639"}


id: GO:0050669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving homocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sulfur amino acid metabolic process","termid":"GO:0031336"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"regulation of homocysteine metabolic process","termid":"GO:0050666"},{"relation_name":"negatively_regulates","term_name":"homocysteine metabolic process","termid":"GO:0050667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0006520"],"is_obsolete":false,"name":"negative regulation of homocysteine metabolic process","synonyms":[{"name":"down regulation of homocysteine metabolic process","type":"exact"},{"name":"down-regulation of homocysteine metabolic process","type":"exact"},{"name":"downregulation of homocysteine metabolic process","type":"exact"},{"name":"inhibition of homocysteine metabolic process","type":"narrow"},{"name":"negative regulation of Hcy metabolic process","type":"exact"},{"name":"negative regulation of Hcy metabolism","type":"exact"},{"name":"negative regulation of homocysteine metabolism","type":"exact"}],"termid":"GO:0050669"}


id: GO:0033322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-homomethionine, a non-protein amino acid synthesized from L-methionine via chain elongation.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homomethionine metabolic process","termid":"GO:0033321"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-homomethionine biosynthetic process","synonyms":[{"name":"homomethionine anabolism","type":"exact"},{"name":"homomethionine biosynthesis","type":"exact"},{"name":"homomethionine biosynthetic process","type":"exact"},{"name":"homomethionine formation","type":"exact"},{"name":"homomethionine synthesis","type":"exact"}],"termid":"GO:0033322"}


id: PBO:0002920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIP zinc transporter 1 (predicted)","termid":"PBO:0002920"}


id: MONDO:0017636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemiparkinsonism-hemiatrophy syndrome is a rare parkinsonian disorder characterized by unilateral body atrophy and slowly progressive, ipsilateral hemiparkinsonian signs (bradykinesia, rigidity, and tremor). Patients typically present with unilateral, action-induced dystonia, in upper or lower limbs, that progresses and becomes bilateral or with tremor which occurs predominantly at rest and progresses to hemiparkinsonism. Scoliosis, scapular winging, raised shoulders, brisk reflexes and extensor plantars are frequently associated.","definition_xrefs":["Orphanet:306669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemiparkinsonism-hemiatrophy syndrome","secondary_identifiers":["MEDGEN:1627807","UMLS:C4545231","GARD:21262","icd11.foundation:193784690"],"synonyms":[{"name":"Hp-HA syndrome","type":"exact"}],"termid":"MONDO:0017636","xrefs":{"Monarch":{"xref_id":"0017636"}}}


id: GO:2000644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"regulation of receptor catabolic process","synonyms":[{"name":"regulation of receptor breakdown","type":"exact"},{"name":"regulation of receptor catabolism","type":"exact"},{"name":"regulation of receptor degradation","type":"exact"}],"termid":"GO:2000644"}


id: GO:0061400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to a calcium ion stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to calcium ion (obsolete GO:0061400)","termid":"GO:0061400"}


id: PBO:0069422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 685, pseudogene","termid":"PBO:0069422"}


id: FYPO:0003722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the removal of leader sequences to generate the mature 5'-end of a tRNA occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"decreased tRNA 5'-leader removal","synonyms":[{"name":"decreased tRNA 5'-leader removal during mitotic cell cycle","type":"related"},{"name":"decreased tRNA 5'-leader removal during vegetative growth","type":"exact"},{"name":"reduced tRNA 5'-leader removal","type":"related"}],"termid":"FYPO:0003722"}


id: PBO:0080171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 6","termid":"PBO:0080171"}


id: PBO:0012271
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdr1-related transcription factor","termid":"PBO:0012271"}


id: SO:0002004
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The ACS is an 11-bp sequence of the form 5'-WTTTAYRTTTW-3' which is at the core of every yeast ARS, and is necessary but not sufficient for recognition and binding by the origin recognition complex (ORC). Functional ARSs require an ACS, as well as other cis elements in the 5' (C domain) and 3' (B domain) flanking sequences of the ACS.","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"ARS","termid":"SO:0000436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS_consensus_sequence","synonyms":[{"name":"ACS","type":"exact"},{"name":"ARS consensus sequence","type":"exact"}],"termid":"SO:0002004"}


id: PBO:0076747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonic family member 2","termid":"PBO:0076747"}


id: PBO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR97","termid":"PBO:0000177"}


id: PBO:0084659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondria-associated F-box protein; involved in maintenance of normal mitochondrial morphology; interacts with Skp1p through the F-box motif; preferentially localizes to the mother cell during budding","termid":"PBO:0084659"}


id: GO:1900631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tridecane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tridecane metabolic process","synonyms":[{"name":"tridecane metabolism","type":"exact"}],"termid":"GO:1900631"}


id: PBO:0031674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_secretion","termid":"PBO:0031674"}


id: PBO:0081581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 510","termid":"PBO:0081581"}


id: MONDO:0100312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ataxia in which the causes of the disease is a perturbation of the vestibular system, leading to its dysfunction.","definition_xrefs":["PMID:32965955","MONDO:patterns/disease_by_dysfunctional_structure"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory ataxia","termid":"MONDO:0100311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular ataxia","secondary_identifiers":["UMLS:C4015052","MEDGEN:863489"],"termid":"MONDO:0100312","xrefs":{"Monarch":{"xref_id":"0100312"}}}


id: GO:0005991
data:
  {"annotated_genes":["SJAG_01209","SJAG_01531","SJAG_01646","SJAG_01862","SJAG_00129","SJAG_00182","SJAG_04859","SJAG_01427"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91360,91361,96025,110964],"is_not":false,"summary":null,"term":"GO:0005991"},{"annotations":[92849,96643,108360,62164,96024,100551,91359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"},{"annotations":[110963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["GOC:jl","ISBN:0028623819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"trehalose metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"mycose metabolic process","type":"exact"},{"name":"mycose metabolism","type":"exact"},{"name":"mykose metabolic process","type":"exact"},{"name":"mykose metabolism","type":"exact"},{"name":"trehalose metabolism","type":"exact"}],"termid":"GO:0005991","terms_by_termid":{"GO:0005991":null,"GO:0005992":null,"GO:0005993":null}}


id: GO:1990596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 4 of the histone.","definition_xrefs":["PMID:20299449"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 deacetylation (obsolete GO:1990596)","termid":"GO:1990596"}


id: PBO:0001178
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.17","termid":"PBO:0001178"}


id: PBO:0077230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 6","termid":"PBO:0077230"}


id: MONDO:0017374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polydactyly (obsolete MONDO:0017374)","termid":"MONDO:0017374","xrefs":{"Monarch":{"xref_id":"0017374"}}}


id: PBO:0055273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2700","termid":"PBO:0055273"}


id: PBO:0081497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 395","termid":"PBO:0081497"}


id: GO:0021828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of a gonadotrophin-releasing hormone producing neuron from the nasal placode to the hypothalamus.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"},{"relation_name":"is_a","term_name":"hypothalamic tangential migration using cell-axon interactions","termid":"GO:0021856"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron development","termid":"GO:0021888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gonadotrophin-releasing hormone neuronal migration to the hypothalamus","secondary_identifiers":["GO:0021857"],"synonyms":[{"name":"gonadotropin-releasing hormone neuronal migration to the hypothalamus","type":"exact"}],"termid":"GO:0021828"}


id: GO:0047132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + dihydrosanguinarine = H2O2 + sanguinarine.","definition_xrefs":["EC:1.5.3.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dihydrobenzophenanthridine oxidase activity","secondary_identifiers":["MetaCyc:1.5.3.12-RXN","RHEA:16621"],"synonyms":[{"name":"dihydrobenzophenanthridine:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047132"}


id: PBO:0042447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 5","termid":"PBO:0042447"}


id: PBO:0113249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oligomeric mitochondrial matrix chaperone; cooperates with Ssc1p in mitochondrial thermotolerance after heat shock; prevents the aggregation of misfolded proteins as well as resolubilize protein aggregates; involved in response to ethanol stress","termid":"PBO:0113249"}


id: PR:Q9HE06
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DHX35 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.09","secondary_identifiers":["UniProtKB:Q9HE06"],"synonyms":[{"name":"DEAH-box helicase C20H4.09 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DHX35","type":"exact"}],"termid":"PR:Q9HE06"}


id: PR:P0CT39
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-6 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.08","synonyms":[{"name":"Spom972h-Tf2-6","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT39"}


id: MONDO:0014223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the ERBB4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 19","secondary_identifiers":["GARD:15980","MEDGEN:811607","DOID:0060210","UMLS:C3715155","OMIM:615515"],"synonyms":[{"name":"ALS19","type":"exact"},{"name":"ERBB4 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 19","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in ERBB4","type":"exact"},{"name":"amyotrophic lateral sclerosis type 19","type":"exact"}],"termid":"MONDO:0014223","xrefs":{"Monarch":{"xref_id":"0014223"}}}


id: PBO:0015272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shuttle craft like transcriptional regulator/ ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0015272"}


id: GO:0002265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of an astrocyte resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","PMID:11138785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation involved in immune response","termid":"GO:0002263"},{"relation_name":"is_a","term_name":"astrocyte activation","termid":"GO:0048143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte activation involved in immune response","synonyms":[{"name":"astrocyte activation during immune response","type":"related"}],"termid":"GO:0002265"}


id: PBO:0064197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 5","termid":"PBO:0064197"}


id: MONDO:0012488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis B virus, susceptibility to","secondary_identifiers":["OMIM:610424","UMLS:C1864880","MEDGEN:400632"],"synonyms":[{"name":"HBV, resistance to","type":"related"},{"name":"HBV, susceptibility to","type":"related"},{"name":"Hepatitis B Virus, resistance to","type":"related"},{"name":"hepatitis B virus infection, susceptibility to","type":"exact"},{"name":"hepatitis b virus, susceptibility to","type":"exact"}],"termid":"MONDO:0012488","xrefs":{"Monarch":{"xref_id":"0012488"}}}


id: MONDO:0010582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diabetes insipidus, neurohypophyseal type, X-linked inheritance (obsolete MONDO:0010582)","secondary_identifiers":["DOID:0081059","OMIM:304900"],"synonyms":[{"name":"diabetes insipidus, neurohypophyseal type","type":"exact"}],"termid":"MONDO:0010582","xrefs":{"Monarch":{"xref_id":"0010582"}}}


id: PBO:0034507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_homologous_chromosome_biorientation_with_abnormal_kinetochore_orientation","termid":"PBO:0034507"}


id: PBO:0075493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 3","termid":"PBO:0075493"}


id: PATO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A balance quality inhering in a bearer by virtue of the bearer's having balance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"balance","termid":"PATO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"balanced","termid":"PATO:0000757"}


id: FYPO:0004222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H4-K20 trimethylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 trimethylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 trimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me3 during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004222"}


id: GO:0043640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of benzoate, by its hydroxylation to cis-1,2-dihydroxybenzoate followed by dehydrogenation to catechol.","definition_xrefs":["MetaCyc:PWY-2503","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzoate catabolic process","termid":"GO:0043639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"benzoate catabolic process via hydroxylation","synonyms":[{"name":"benzoate breakdown via hydroxylation","type":"exact"},{"name":"benzoate degradation via hydroxylation","type":"exact"}],"termid":"GO:0043640"}


id: PBO:0041520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C16orf46 divergent transcript","termid":"PBO:0041520"}


id: PBO:0040294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2","termid":"PBO:0040294"}


id: GO:2000402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell migration","termid":"GO:0071676"},{"relation_name":"is_a","term_name":"regulation of lymphocyte migration","termid":"GO:2000401"},{"relation_name":"negatively_regulates","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte migration","termid":"GO:2000402"}


id: PBO:0047870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q37.3)","termid":"PBO:0047870"}


id: PR:O94364
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wpl1 gene.","definition_xrefs":["UniProtKB:O94364","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wings apart-like protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.17c","synonyms":[{"name":"Spom972h-wpl1","type":"exact"}],"termid":"PR:O94364"}


id: MONDO:0700162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granular cell tumor occurring in a dog.","definition_xrefs":["NCIT:C158784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine glioma","termid":"MONDO:0700151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine granular cell tumor","termid":"MONDO:0700162","xrefs":{"Monarch":{"xref_id":"0700162"}}}


id: PBO:0005734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set5 (predicted)","termid":"PBO:0005734"}


id: GO:0045173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of O-sialoglycoproteins, glycoproteins which contain sialic acid as one of their carbohydrates. They are often found on or in the cell or tissue membranes and participate in a variety of biological activities.","definition_xrefs":["PMID:8824323","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"O-sialoglycoprotein catabolic process","synonyms":[{"name":"O-sialoglycoprotein breakdown","type":"exact"},{"name":"O-sialoglycoprotein catabolism","type":"exact"},{"name":"O-sialoglycoprotein degradation","type":"exact"}],"termid":"GO:0045173"}


id: PBO:0085395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane P2-type H+-ATPase; pumps protons out of cell; major regulator of cytoplasmic pH and plasma membrane potential; long-lived hexameric protein asymmetrically distributed at plasma membrane between mother cells and buds; accumulates at high levels in mother cells during aging, buds emerge with very low levels of Pma1p, newborn cells have low levels of Pma1p; Hsp30p plays a role in Pma1p regulation; interactions with Std1p appear to propagate [GAR+]","termid":"PBO:0085395"}


id: PBO:0087922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that is activated by a MAPK signaling cascade; activates genes involved in mating or pseudohyphal/invasive growth pathways; cooperates with Tec1p transcription factor to regulate genes specific for invasive growth","termid":"PBO:0087922"}


id: GO:0015209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cytosine, 4-amino-2-hydroxypyrimidine from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cytosine transmembrane transporter activity","termid":"GO:0015209"}


id: PBO:0041243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 116","termid":"PBO:0041243"}


id: PBO:0057712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1298","termid":"PBO:0057712"}


id: PBO:0064480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLH antisense RNA 1","termid":"PBO:0064480"}


id: PBO:0111815
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein","termid":"PBO:0111815"}


id: FYPO:0004444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased, and the protein is instead present in the plasma membrane, during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:21832151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II with protein mislocalized to plasma membrane","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to prospore membrane with protein mislocalized to plasma membrane during meiosis II","type":"related"},{"name":"reduced protein localization to prospore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"}],"termid":"FYPO:0004444"}


id: GO:0106356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + NADPH + O2 = 3,4-dihydroxybenzoate + H2O + NADP+.","definition_xrefs":["RHEA:19477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","termid":"GO:0018671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase (NADPH) activity","synonyms":[{"name":"4-hydroxybenzoate 3-monooxygenase [NADPH] activity","type":"exact"}],"termid":"GO:0106356"}


id: GO:1904999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte adhesion to arterial endothelial cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bc","GOC:BHF_miRNA","GOC:BHF","PMID:22267480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904996"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to arterial endothelial cell","termid":"GO:1904997"},{"relation_name":"positively_regulates","term_name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of leukocyte adhesion to arterial endothelial cell","synonyms":[{"name":"activation of leukocyte adhesion to arterial endothelial cell","type":"narrow"},{"name":"up regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"up-regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"upregulation of leukocyte adhesion to arterial endothelial cell","type":"exact"}],"termid":"GO:1904999"}


id: PBO:0060618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 4","termid":"PBO:0060618"}


id: PBO:0014282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit Mdm34 (predicted)","termid":"PBO:0014282"}


id: GO:0021741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the spinal trigeminal nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal sensory nucleus development","termid":"GO:0021730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal trigeminal nucleus development","termid":"GO:0021741"}


id: PBO:0063202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP1 antisense RNA 1","termid":"PBO:0063202"}


id: GO:0018158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by oxidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein oxidation","synonyms":[{"name":"protein amino acid oxidation","type":"exact"}],"termid":"GO:0018158"}


id: GO:0022821
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"}]},"cv_name":"molecular_function","definition":"Catalysis of the active transport of a potassium ion across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"solute:potassium antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"potassium ion antiporter activity","type":"exact"}],"termid":"GO:0022821","terms_by_termid":{"GO:0015386":null}}


id: GO:0005290
data:
  {"annotated_genes":["SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96865,103327],"is_not":false,"summary":null,"term":"GO:0005290"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-histidine from one side of a membrane to the other. L-histidine is 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-histidine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-histidine transporter activity","type":"broad"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"}],"termid":"GO:0005290","terms_by_termid":{"GO:0005290":null}}


id: PBO:0036220
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_protein_movement_within_plasma_membrane_at_cell_tip","termid":"PBO:0036220"}


id: PBO:0067942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 244","termid":"PBO:0067942"}


id: PBO:0079401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 8","termid":"PBO:0079401"}


id: PBO:0066907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 208","termid":"PBO:0066907"}


id: PBO:0061263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch receptor 3","termid":"PBO:0061263"}


id: PBO:0090389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase-like, unknown specificity","termid":"PBO:0090389"}


id: PBO:0041368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 46","termid":"PBO:0041368"}


id: GO:0008549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. An enzyme that is involved in endocytosis and is instrumental in pinching off membrane vesicles.","definition_xrefs":["EC:3.6.5.5","MetaCyc:3.6.1.50-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete dynamin GTPase activity (obsolete GO:0008549)","synonyms":[{"name":"dynamin GTPase activity","type":"exact"},{"name":"dynamine GTPase activity","type":"exact"}],"termid":"GO:0008549"}


id: MONDO:0859368
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85102],"is_not":false,"summary":null,"term":"MONDO:0859368"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"short QT syndrome","termid":"MONDO:0000453"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"short QT syndrome 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774304","MEDGEN:1824077","OMIM:620231"],"termid":"MONDO:0859368","terms_by_termid":{"MONDO:0859368":null},"xrefs":{"Monarch":{"xref_id":"0859368"}}}


id: FYPO:0008162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the incidence of mitotic cell cycle arrest or delay due to regulation by the mitotic S-phase DNA damage checkpoint is greater than in wild type under any specified set of conditions.","definition_xrefs":["PMID:18344406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal S-phase DNA damage checkpoint","termid":"FYPO:0000007"},{"relation_name":"is_a","term_name":"increased mitotic DNA damage checkpoint activation","termid":"FYPO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased activation of S-phase DNA damage checkpoint","termid":"FYPO:0008162"}


id: PBO:0001640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway protein Sec39 (predicted)","termid":"PBO:0001640"}


id: FYPO:0000257
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"},"SJAG_01680:allele-2":{"allele_type":"amino_acid_mutation","description":"P470L","gene_uniquename":"SJAG_01680","name":"chk1-P470L","synonyms":[{"name":"chk1- hyperactive (chk1-hyp)","reference":"PMID:23090706","type":"exact"},{"name":"chk1-hyperactive (chk1-hyp)","reference":"PMID:20368354","type":"exact"}],"uniquename":"SJAG_01680:allele-2"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118764,118762,118761,118760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"},{"annotations":[118599,118598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[118618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007790"}],"single_locus_phenotype":[{"annotations":[119017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"},{"annotations":[118936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004165"},{"annotations":[118634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"},{"annotations":[118591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[118576,118931,118608,118615,118930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007790"},{"annotations":[118927,118924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000760"},{"annotations":[118676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[118663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[118704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"},{"annotations":[118975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[118926,118929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000579"},{"annotations":[118928,118925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"},{"annotations":[118589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000596"},{"annotations":[118923,118868,118921,118922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001357"},{"annotations":[118633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004693"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype that shows no detectable differences from normal. In fission yeast, the characteristics of wild type cells of the sequenced strain (972 h-) or the isogenic h+ or h90 strains are regarded as normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"inheres_in","term_name":"phenotype","termid":"FYPO:0000001"},{"relation_name":"is_a","term_name":"phenotype","termid":"FYPO:0000001"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_00601":null,"SJAG_01143":null,"SJAG_01355":null,"SJAG_01458":null,"SJAG_01680":null,"SJAG_01946":null,"SJAG_02266":null,"SJAG_02486":null,"SJAG_02621":null,"SJAG_02763":null,"SJAG_02796":null,"SJAG_03118":null,"SJAG_03198":null,"SJAG_03250":null,"SJAG_03575":null,"SJAG_03689":null,"SJAG_03720":null,"SJAG_04287":null,"SJAG_04671":null,"SJAG_04883":null},"genotype_count":21,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]},"ago1delta__leo1delta":{"display_name":"ago1delta 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id: PBO:0087527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of MRX complex with Mre11p and Xrs2p; complex is involved in processing double-strand DNA breaks in vegetative cells, initiation of meiotic DSBs, telomere maintenance, and nonhomologous end joining; forms nuclear foci upon DNA replication stress","termid":"PBO:0087527"}


id: MONDO:0010549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth neuropathy that is inherited in an X-linked manner, and is associated with mutation(s) in the GJB1 gene, encoding gap junction beta-1 protein. The condition is characterized by moderate to severe motor and sensory neuropathy in males, and mild to no symptoms in females.","definition_xrefs":["NCIT:C129068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type X","termid":"MONDO:0018994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease X-linked dominant 1","secondary_identifiers":["SCTID:763455008","UMLS:C0393808","DOID:0110209","GARD:1258","MEDGEN:98290","OMIM:302800","Orphanet:101075"],"synonyms":[{"name":"CMT1X","type":"related"},{"name":"CMT2","type":"broad"},{"name":"CMT2, formerly","type":"broad"},{"name":"CMTX","type":"broad"},{"name":"CMTX 1","type":"exact"},{"name":"CMTX1","type":"exact"},{"name":"Charcot Marie Tooth disease X-linked 1","type":"exact"},{"name":"Charcot-Marie-Tooth disease X-linked dominant 1","type":"exact"},{"name":"Charcot-Marie-Tooth disease X-linked dominant type 1","type":"exact"},{"name":"Charcot-Marie-Tooth disease type X caused by mutation in GJB1","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked dominant, 1","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked dominant, type 1","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked, 1","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy X type 1","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy X-linked dominant 1","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, X-linked dominant, 1, X-linked dominant","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, X-linked, 1","type":"exact"},{"name":"Charcot-Marie-Tooth peroneal muscular atrophy, X-linked","type":"related"},{"name":"GJB1 Charcot-Marie-Tooth disease type X","type":"exact"},{"name":"HMSN, X-linked","type":"broad"},{"name":"X-linked Charcot-Marie-Tooth disease type 1","type":"exact"},{"name":"hereditary motor and sensory neuropathy, X-linked","type":"broad"}],"termid":"MONDO:0010549","xrefs":{"Monarch":{"xref_id":"0010549"}}}


id: FYPO:0000270
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119022,119034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to osmotic stress","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_02592"],"single_locus_genotype_uniquenames":["atf1delta","sty1delta"],"synonyms":[{"name":"hypersensitive to osmotic stress","type":"exact"},{"name":"osmotic stress resistance: decreased","type":"related"},{"name":"sensitive to osmotic stress during mitotic cell cycle","type":"related"},{"name":"sensitive to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000270","terms_by_termid":{"FYECO:0000207":null,"FYPO:0000271":null,"FYPO_EXT:0000001":null}}


id: MONDO:0030878
data:
  {"annotated_genes":["SJAG_01642"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85229],"is_not":false,"summary":null,"term":"MONDO:0030878"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01642":null},"genotype_count":0,"is_obsolete":false,"name":"Kaya-Barakat-Masson syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1725501","OMIM:619125","UMLS:C5436856","GARD:18537"],"synonyms":[{"name":"KABAMAS","type":"exact"}],"termid":"MONDO:0030878","terms_by_termid":{"MONDO:0030878":null},"xrefs":{"Monarch":{"xref_id":"0030878"}}}


id: MONDO:0000175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ataxia-telangiectasia-like disorder (obsolete MONDO:0000175)","termid":"MONDO:0000175","xrefs":{"Monarch":{"xref_id":"0000175"}}}


id: MONDO:0003137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the glomeruli, in which all glomeruli are affected, resulting in renal failure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"diffuse glomerulonephritis","secondary_identifiers":["UMLS:C0859036","DOID:4781","MEDGEN:163563","NCIT:C35799"],"termid":"MONDO:0003137","xrefs":{"Monarch":{"xref_id":"0003137"}}}


id: GO:0062198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A region of heterochromatin associated with sites in rDNA repeats where replication forks pause.","definition_xrefs":["PMID:25417108"],"gene_count":0,"genotype_count":0,"name":"obsolete rDNA replication pause site heterochromatin (obsolete GO:0062198)","termid":"GO:0062198"}


id: PBO:0088497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic lysine-tRNA ligase Krs1","termid":"PBO:0088497"}


id: PBO:0068494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 78, pseudogene","termid":"PBO:0068494"}


id: PBO:0052805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 72","termid":"PBO:0052805"}


id: MONDO:0015201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare developmental defect during embryogenesis malformation syndrome characterized by bands of extensile tissue connecting the margins of the upper and lower eyelids, in association with anal atresia. Patients may additionally present cleft palate, hydrocephalus and meningomyelocele. There have been no further descriptions in the literature since 1993.","definition_xrefs":["Orphanet:1074"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyloblepharon filiforme-imperforate anus syndrome","secondary_identifiers":["MEDGEN:1666000","GARD:697","UMLS:C4751231"],"synonyms":[{"name":"Aughton-Hufnagle syndrome","type":"exact"},{"name":"ankyloblepharon filiforme adnatum-imperforate anus syndrome","type":"related"}],"termid":"MONDO:0015201","xrefs":{"Monarch":{"xref_id":"0015201"}}}


id: PBO:0061104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurolysin","termid":"PBO:0061104"}


id: GO:0042157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any conjugated, water-soluble protein in which the covalently attached nonprotein group consists of a lipid or lipids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein metabolic process","synonyms":[{"name":"lipoprotein metabolism","type":"exact"}],"termid":"GO:0042157"}


id: PBO:0003140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor IF-2Mt (predicted)","termid":"PBO:0003140"}


id: GO:1900342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from dimethyl sulfide","termid":"GO:1900342"}


id: PBO:0013753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciclin domain protein Fsc1","termid":"PBO:0013753"}


id: PBO:0090407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid family protease","termid":"PBO:0090407"}


id: GO:0070946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a gram-positive bacterium by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"},{"relation_name":"part_of","term_name":"defense response to Gram-positive bacterium","termid":"GO:0050830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of gram-positive bacterium","synonyms":[{"name":"neutrophil mediated killing of gram-positive bacterium","type":"exact"}],"termid":"GO:0070946"}


id: PBO:0061521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P) dependent steroid dehydrogenase-like","termid":"PBO:0061521"}


id: PBO:0057337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 523","termid":"PBO:0057337"}


id: GO:0047894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin = adenosine 3',5'-diphosphate + H+ + quercetin 3-sulfate.","definition_xrefs":["EC:2.8.2.25","RHEA:13453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"flavonol 3-sulfotransferase activity","secondary_identifiers":["MetaCyc:FLAVONOL-3-SULFOTRANSFERASE-RXN","KEGG_REACTION:R02159"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin 3-sulfotransferase activity","type":"exact"},{"name":"flavonol 3-sulphotransferase activity","type":"exact"}],"termid":"GO:0047894"}


id: PBO:0066612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1 pseudogene 3","termid":"PBO:0066612"}


id: PBO:0058940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocyte inducing transcription factor","termid":"PBO:0058940"}


id: GO:0015282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH oxidase-associated cytochrome b558 hydrogen channel activity (obsolete GO:0015282)","synonyms":[{"name":"NADPH oxidase-associated cytochrome b558 hydrogen channel activity","type":"exact"},{"name":"NADPH oxidase-associated cytochrome b558 proton channel","type":"exact"}],"termid":"GO:0015282"}


id: MONDO:0850059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary persistence of fetal hemoglobin-intellectual disability syndrome","secondary_identifiers":["GARD:22458","Orphanet:619233"],"termid":"MONDO:0850059","xrefs":{"Monarch":{"xref_id":"0850059"}}}


id: PBO:0069720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1000, pseudogene","termid":"PBO:0069720"}


id: PBO:0067900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 202","termid":"PBO:0067900"}


id: PR:G2TRT5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC663.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCOCO-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.18","synonyms":[{"name":"Spom972h-SPCC663.18","type":"exact"}],"termid":"PR:G2TRT5"}


id: PBO:0038420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A1BG antisense RNA 1","termid":"PBO:0038420"}


id: GO:0050218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + propanoate + CoA = AMP + diphosphate + propanoyl-CoA.","definition_xrefs":["MetaCyc:PROPIONATE--COA-LIGASE-RXN","EC:6.2.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid-CoA ligase activity","termid":"GO:0031955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"propionate-CoA ligase activity","secondary_identifiers":["RHEA:20373"],"synonyms":[{"name":"propanoate:CoA ligase (AMP-forming)","type":"related"},{"name":"propionyl-CoA synthetase activity","type":"related"}],"termid":"GO:0050218"}


id: PBO:0072711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 4","termid":"PBO:0072711"}


id: GO:0036141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction L-phenylalanine + oxaloacetate = phenylpyruvate + aspartate.","definition_xrefs":["GOC:pde","PMID:15606768"],"gene_count":0,"genotype_count":0,"name":"obsolete L-phenylalanine-oxaloacetate transaminase activity (obsolete GO:0036141)","synonyms":[{"name":"L-phenylalanine:oxaloacetate transaminase activity","type":"exact"}],"termid":"GO:0036141"}


id: MOD:01858
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(N-acetylamino)glucosyl-L-cysteine.","definition_xrefs":["PubMed:21251913","ChEBI:61631","PubMed:21395300","RESID:AA0560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycosylated residue","termid":"MOD:00426"},{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905","MOD:00764"],"is_obsolete":false,"name":"S-(N-acetylamino)glucosyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(2-acetamido-2-deoxy-beta-D-glucopyranosylsulfanyl)propanoic acid","type":"exact"},{"name":"CARBOHYD S-linked (GlcNAc) cysteine","type":"exact"},{"name":"S-(N-acetylamino)glucosyl-L-cysteine","type":"exact"},{"name":"S-[(N-acetylamino)glycosyl]cysteine","type":"exact"},{"name":"S-[beta-D-(N-acetylamino)glucopyranosyl]cysteine","type":"exact"}],"termid":"MOD:01858"}


id: PBO:0066790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 89","termid":"PBO:0066790"}


id: PBO:0051982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jagged canonical Notch ligand 1","termid":"PBO:0051982"}


id: MONDO:0014207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An age related macular degeneration associated with variation at or near the C2 and CFB genes on chromosome 6p21.","definition_xrefs":["PMID:16518403","DOID:0110026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 14","secondary_identifiers":["MEDGEN:815983","OMIM:615489","UMLS:C3809653"],"synonyms":[{"name":"ARMD14","type":"exact"},{"name":"age related macular degeneration type 14","type":"exact"},{"name":"macular Degeneration, age-related, reduced risk of","type":"related"},{"name":"macular Degeneration, age-related, type 14","type":"exact"},{"name":"macular degeneration, age-related, 14","type":"related"},{"name":"macular degeneration, age-related, 14, reduced risk of, digenic dominant","type":"exact"}],"termid":"MONDO:0014207","xrefs":{"Monarch":{"xref_id":"0014207"}}}


id: PBO:0005400
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.29","termid":"PBO:0005400"}


id: PBO:0092019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tryptophan (cca), mitochondrial","termid":"PBO:0092019"}


id: PBO:0076526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 39","termid":"PBO:0076526"}


id: MONDO:0008114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by the presence of persistent and recurrent irrational thoughts (obsessions), resulting in marked anxiety and repetitive excessive behaviors (compulsions) as a way to try to decrease that anxiety.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anxiety disorder","termid":"MONDO:0005618"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obsessive-compulsive disorder","secondary_identifiers":["UMLS:C0028768","icd11.foundation:1582741816","EFO:0004242","OMIM:164230","DOID:10933","ICD10CM:F42","ICD9:300.3","MESH:D009771","SCTID:191736004","MEDGEN:14445","NCIT:C88411"],"synonyms":[{"name":"Anancastic neurosis","type":"exact"},{"name":"OCD","type":"related"},{"name":"obsessive compulsive disorder","type":"exact"},{"name":"obsessive-compulsive disorder","type":"exact"},{"name":"obsessive-compulsive disorder, susceptibility to","type":"exact"}],"termid":"MONDO:0008114","xrefs":{"Monarch":{"xref_id":"0008114"}}}


id: GO:1990820
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101883],"is_not":false,"summary":null,"term":"GO:1990820"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic DNA integrity checkpoint signaling.","definition_xrefs":["PMID:7548844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"},{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to signal involved in mitotic DNA integrity checkpoint","type":"exact"}],"termid":"GO:1990820","terms_by_termid":{"GO:1990820":null}}


id: MONDO:0016721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pineal tumor of neuroepithelial tissue (obsolete MONDO:0016721)","secondary_identifiers":["Orphanet:251905"],"termid":"MONDO:0016721","xrefs":{"Monarch":{"xref_id":"0016721"}}}


id: PBO:0033815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm3/Smc3","termid":"PBO:0033815"}


id: GO:0021624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the oculomotor nerve. This process pertains to the physical shaping of a rudimentary structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:dgh","GOC:cls","ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"oculomotor nerve morphogenesis","termid":"GO:0021622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve structural organization","synonyms":[{"name":"CN III structural organization","type":"related"},{"name":"oculomotor nerve structural organisation","type":"exact"}],"termid":"GO:0021624"}


id: GO:0052234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052234)","synonyms":[{"name":"negative aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052234"}


id: PBO:0035886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule-based_movement","termid":"PBO:0035886"}


id: PBO:0085453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible shared subunit of Cop9 signalosome (CSN) and eIF3; binds eIF3b subunit Prt1p, has possible dual functions in transcriptional and translational control, contains a PCI (Proteasome-COP9 signalosome (CSN)-eIF3) domain","termid":"PBO:0085453"}


id: MONDO:0002770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Normal or abnormal secretions from the vagina. Mucus produced by the cervical glands is discharged from the vagina naturally, especially during the childbearing years. Causes of abnormal vaginal discharge include infectious agents (e.g., Neisseria gonorrhea, Chlamydia trachomatis, Trichomonas, and Candida albicans), the presence of foreign bodies, and cervical or vaginal cancer.","definition_xrefs":["NCIT:C50795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal disorder","termid":"MONDO:0001433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal discharge","secondary_identifiers":["icd11.foundation:2123556104","MESH:D019522","DOID:3767","MEDGEN:65302","UMLS:C0227791"],"synonyms":[{"name":"Discharge, vaginal","type":"exact"}],"termid":"MONDO:0002770","xrefs":{"Monarch":{"xref_id":"0002770"}}}


id: PBO:0071428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 34","termid":"PBO:0071428"}


id: MONDO:0060629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal recessive","secondary_identifiers":["UMLS:C4693325","EFO:0009300","OMIM:617820","MEDGEN:1646665"],"synonyms":[{"name":"NDHMSR","type":"related"},{"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal recessive","type":"exact"}],"termid":"MONDO:0060629","xrefs":{"Monarch":{"xref_id":"0060629"}}}


id: PBO:0080229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin K epoxide reductase complex subunit 1 like 1","termid":"PBO:0080229"}


id: PBO:0091317
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana AtSGP2","termid":"PBO:0091317"}


id: MONDO:0010426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked endothelial corneal dystrophy (XECD) is a rare subtype of posterior corneal dystrophy characterized by congenital ground glass corneal clouding or a diffuse corneal haze, and blurred vision in male patients.","definition_xrefs":["Orphanet:293621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal endothelial dystrophy","termid":"MONDO:0000766"},{"relation_name":"is_a","term_name":"posterior corneal dystrophy","termid":"MONDO:0020214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked endothelial corneal dystrophy","secondary_identifiers":["SCTID:718579008","UMLS:C2749049","DOID:0060446","MEDGEN:413518","icd11.foundation:1842066261","GARD:17339","MESH:C567587","OMIM:300779"],"synonyms":[{"name":"XECD","type":"exact"},{"name":"corneal dystrophy, endothelial, X-linked","type":"related"},{"name":"corneal dystrophy, endothelial, X-linked, X-linked dominant","type":"exact"},{"name":"endothelial corneal dystrophy, X-linked","type":"related"}],"termid":"MONDO:0010426","xrefs":{"Monarch":{"xref_id":"0010426"}}}


id: PBO:0066498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFT1 homolog","termid":"PBO:0066498"}


id: PBO:0029028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_pole_body_during_interphase","termid":"PBO:0029028"}


id: FYPO:0003193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:23051734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of microtubule depolymerization during vegetative growth","synonyms":[{"name":"normal microtubule depolymerization rate","type":"exact"},{"name":"normal rate of microtubule catastrophe","type":"related"},{"name":"normal rate of microtubule depolymerisation","type":"exact"},{"name":"normal rate of microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"normal rate of microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"normal rate of microtubule shrinkage","type":"related"}],"termid":"FYPO:0003193"}


id: MONDO:0010323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atkin-Flaitz syndrome is characterized by moderate to severe intellectual deficit, short stature, macrocephaly, and characteristic facies. It has been described in 11 males and three females from three successive generations of the same family. The males also presented with postpubertal macroorchidism. Transmission is X-linked.","definition_xrefs":["Orphanet:1193"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atkin-Flaitz syndrome","secondary_identifiers":["OMIM:300431","GARD:3537","UMLS:C0796206","SCTID:718577005","MEDGEN:163230"],"synonyms":[{"name":"Atkin syndrome","type":"related"},{"name":"Atkin-Flaitz syndrome","type":"exact"},{"name":"X-linked intellectual disability, Atkin type","type":"exact"}],"termid":"MONDO:0010323","xrefs":{"Monarch":{"xref_id":"0010323"}}}


id: GO:0033984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate = indole + D-glyceraldehyde 3-phosphate.","definition_xrefs":["EC:4.1.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indole-3-glycerol-phosphate lyase activity","secondary_identifiers":["KEGG_REACTION:R02340","RHEA:14081","MetaCyc:RXN0-2381"],"synonyms":[{"name":"(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase (indole-forming) activity","type":"related"},{"name":"(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"BX1","type":"related"},{"name":"IGL","type":"related"},{"name":"TSA","type":"related"},{"name":"indole glycerol phosphate hydrolase activity","type":"related"},{"name":"indole synthase activity","type":"related"},{"name":"indole-3-glycerol phosphate lyase activity","type":"related"},{"name":"indole-3-glycerolphosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"indoleglycerolphosphate aldolase activity","type":"related"},{"name":"tryptophan synthase alpha activity","type":"narrow"},{"name":"tryptophan synthase alpha subunit activity","type":"narrow"}],"termid":"GO:0033984"}


id: PBO:0078619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM67 antisense RNA 1","termid":"PBO:0078619"}


id: PBO:0002953
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental disorders","termid":"PBO:0002953"}


id: PBO:0002392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 regulator Dap1","termid":"PBO:0002392"}


id: PBO:0080024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 10","termid":"PBO:0080024"}


id: PBO:0081597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 3","termid":"PBO:0081597"}


id: GO:0061291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contributes to the branching of the ureteric bud. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in ureteric bud branching (obsolete GO:0061291)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in ureteric bud branching","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in ureteric bud branching","type":"exact"}],"termid":"GO:0061291"}


id: GO:0106122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a cobalamin metabolic process.","definition_xrefs":["PMID:29056341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vitamin metabolic process","termid":"GO:0046137"},{"relation_name":"is_a","term_name":"regulation of cobalamin metabolic process","termid":"GO:0106064"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole metabolic process","termid":"GO:1901402"},{"relation_name":"negatively_regulates","term_name":"cobalamin metabolic process","termid":"GO:0009235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150","GO:0033013"],"is_obsolete":false,"name":"negative regulation of cobalamin metabolic process","termid":"GO:0106122"}


id: PBO:0057478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 597","termid":"PBO:0057478"}


id: PBO:0083528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SFL1/YOR140W","termid":"PBO:0083528"}


id: MONDO:0011126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute insulin response","secondary_identifiers":["UMLS:C1866503","MEDGEN:355729","OMIM:601676"],"synonyms":[{"name":"AIR","type":"exact"},{"name":"acute insulin response","type":"exact"}],"termid":"MONDO:0011126","xrefs":{"Monarch":{"xref_id":"0011126"}}}


id: GO:1903073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of death-inducing signaling complex assembly.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:21785459","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of death-inducing signaling complex assembly","termid":"GO:1903072"},{"relation_name":"is_a","term_name":"negative regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001237"},{"relation_name":"negatively_regulates","term_name":"death-inducing signaling complex assembly","termid":"GO:0071550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of death-inducing signaling complex assembly","synonyms":[{"name":"downregulation of DD-mediated complex assembly","type":"exact"},{"name":"downregulation of DISC assembly","type":"exact"},{"name":"downregulation of DISC formation","type":"exact"},{"name":"downregulation of death domain-mediated complex assembly","type":"exact"},{"name":"down regulation of DD-mediated complex assembly","type":"exact"},{"name":"down regulation of DISC assembly","type":"exact"},{"name":"down regulation of DISC formation","type":"exact"},{"name":"down regulation of death domain-mediated complex assembly","type":"exact"},{"name":"down regulation of death domain-mediated complex assembly involved in extrinsic apoptotic pathway","type":"exact"},{"name":"down regulation of death-inducing signaling complex assembly","type":"exact"},{"name":"down regulation of death-inducing signaling complex formation","type":"exact"},{"name":"down regulation of death-inducing signalling complex assembly","type":"exact"},{"name":"down-regulation of DD-mediated complex assembly","type":"exact"},{"name":"down-regulation of DISC assembly","type":"exact"},{"name":"down-regulation of DISC formation","type":"exact"},{"name":"down-regulation of death domain-mediated complex assembly","type":"exact"},{"name":"down-regulation of death domain-mediated complex assembly involved in extrinsic apoptotic pathway","type":"exact"},{"name":"down-regulation of death-inducing signaling complex assembly","type":"exact"},{"name":"down-regulation of death-inducing signaling complex formation","type":"exact"},{"name":"down-regulation of death-inducing signalling complex assembly","type":"exact"},{"name":"downregulation of death domain-mediated complex assembly involved in extrinsic apoptotic pathway","type":"exact"},{"name":"downregulation of death-inducing signaling complex assembly","type":"exact"},{"name":"downregulation of death-inducing signaling complex formation","type":"exact"},{"name":"downregulation of death-inducing signalling complex assembly","type":"exact"},{"name":"inhibition of DD-mediated complex assembly","type":"narrow"},{"name":"inhibition of DISC assembly","type":"narrow"},{"name":"inhibition of DISC formation","type":"narrow"},{"name":"inhibition of death domain-mediated complex assembly","type":"narrow"},{"name":"inhibition of death domain-mediated complex assembly involved in extrinsic apoptotic pathway","type":"narrow"},{"name":"inhibition of death-inducing signaling complex assembly","type":"narrow"},{"name":"inhibition of death-inducing signaling complex formation","type":"narrow"},{"name":"inhibition of death-inducing signalling complex assembly","type":"narrow"},{"name":"negative regulation of DD-mediated complex assembly","type":"exact"},{"name":"negative regulation of DISC assembly","type":"exact"},{"name":"negative regulation of DISC formation","type":"exact"},{"name":"negative regulation of death domain-mediated complex assembly","type":"exact"},{"name":"negative regulation of death domain-mediated complex assembly involved in extrinsic apoptotic pathway","type":"exact"},{"name":"negative regulation of death-inducing signaling complex formation","type":"exact"},{"name":"negative regulation of death-inducing signalling complex assembly","type":"exact"}],"termid":"GO:1903073"}


id: GO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glandular epithelial cell over time, from its formation to the mature structure. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell development","termid":"GO:0002066"},{"relation_name":"part_of","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glandular epithelial cell development","termid":"GO:0002068"}


id: FYPO:0002082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination during vegetative growth","termid":"FYPO:0000905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased protein ubiquitination during vegetative growth","synonyms":[{"name":"increased protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"increased protein ubiquitinylation during vegetative growth","type":"exact"},{"name":"increased protein ubiquitylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002082"}


id: PBO:0065862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB19, member RAS oncogene family","termid":"PBO:0065862"}


id: MONDO:0005584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Serious heritable structural anomalies of the left side of the heart, including hypoplastic left heart syndrome, aortic valve stenosis, coarctation of the aorta, mitral valve anomalies and bicuspid aortic valve, that are present from birth.","definition_xrefs":["EFO:0005938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital left-sided heart lesions","secondary_identifiers":["UMLS:C4022397","MEDGEN:868006"],"termid":"MONDO:0005584","xrefs":{"Monarch":{"xref_id":"0005584"}}}


id: PBO:0053630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 676","termid":"PBO:0053630"}


id: PBO:0053222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat LGI family member 2","termid":"PBO:0053222"}


id: PBO:0066881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 181","termid":"PBO:0066881"}


id: PBO:0070212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 141 pseudogene","termid":"PBO:0070212"}


id: MONDO:0013783
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86206],"is_not":false,"summary":null,"term":"MONDO:0013783"}]},"cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the ABCB6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614497","UMLS:C3281027","GARD:15811","MEDGEN:482657"],"synonyms":[{"name":"ABCB6 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"MCOPCB7","type":"related"},{"name":"microphthalmia, isolated, with coloboma 7","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in ABCB6","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 7","type":"exact"}],"termid":"MONDO:0013783","terms_by_termid":{"MONDO:0013783":null},"xrefs":{"Monarch":{"xref_id":"0013783"}}}


id: GO:0140813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: urate(out) + anion (in) = urate (in) + anion (out).","definition_xrefs":["PMID:18411268","PMID:12024214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"urate:monoatomic anion antiporter activity","synonyms":[{"name":"urate:anion antiporter activity","type":"broad"},{"name":"urate:organic anion antiporter activity","type":"narrow"}],"termid":"GO:0140813"}


id: GO:0071385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"cellular response to corticosteroid stimulus","termid":"GO:0071384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"}


id: PBO:0063949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIN2 (TERF1) interacting telomerase inhibitor 1","termid":"PBO:0063949"}


id: MONDO:0005475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A migraine disorder characterized by episodes that are preceded by focal neurological symptoms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migraine disorder","termid":"MONDO:0005277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with aura","secondary_identifiers":["UMLS:C0154723","NCIT:C117005","DOID:10024","ICD9:346.00","MEDGEN:57822","HP:0002077","ICD9:346.0","MESH:D020325","icd11.foundation:525744634","SCTID:4473006"],"synonyms":[{"name":"classic migraine","type":"exact"}],"termid":"MONDO:0005475","xrefs":{"Monarch":{"xref_id":"0005475"}}}


id: FYPO:0005402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the single-stranded telomeric 3' overhang is longer than normal.","definition_xrefs":["PMID:12861005","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during vegetative growth","termid":"FYPO:0002254"},{"relation_name":"is_a","term_name":"abnormal telomere structure","termid":"FYPO:0006510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"increased telomeric 3' overhang length during vegetative growth","synonyms":[{"name":"increased single-stranded telomeric 3' overhang length during vegetative growth","type":"exact"},{"name":"increased telomere 3' overhang length during vegetative growth","type":"exact"},{"name":"increased telomeric 3' overhang length during mitotic cell cycle","type":"related"},{"name":"increased telomeric G-strand overhang length during vegetative growth","type":"exact"}],"termid":"FYPO:0005402"}


id: PBO:0086333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proton-coupled oligopeptide transporter of the plasma membrane; also transports glutathione and phytochelatin; member of the OPT family","termid":"PBO:0086333"}


id: GO:0045567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 2.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of TRAIL receptor 2 biosynthetic process (obsolete GO:0045567)","synonyms":[{"name":"down regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"down-regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"downregulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"inhibition of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"negative regulation of TRAIL receptor 2 anabolism","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 formation","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 synthesis","type":"exact"}],"termid":"GO:0045567"}


id: GO:0009194
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[115022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate biosynthetic process","termid":"GO:0009139"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate biosynthetic process","termid":"GO:0009188"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside diphosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009194","terms_by_termid":{"GO:0006225":null,"GO:0046705":null}}


id: MONDO:0016288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glassy cell carcinoma of the cervix uteri (obsolete MONDO:0016288)","termid":"MONDO:0016288","xrefs":{"Monarch":{"xref_id":"0016288"}}}


id: GO:2000593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metanephric DCT cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of metanephric DCT cell differentiation","termid":"GO:2000592"},{"relation_name":"negatively_regulates","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric DCT cell differentiation","synonyms":[{"name":"negative regulation of metanephric distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:2000593"}


id: PBO:0045268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 5","termid":"PBO:0045268"}


id: GO:0031598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The regulatory subcomplex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle","termid":"GO:0005838"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome complex","termid":"GO:0031595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear proteasome regulatory particle","termid":"GO:0031598"}


id: GO:0035581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining an extracellular signaling ligand, such that the ligand is unable to bind to its cell surface receptor.","definition_xrefs":["GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular negative regulation of signal transduction","termid":"GO:1900116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sequestering of extracellular ligand from receptor","synonyms":[{"name":"extracellular sequestering of receptor ligand","type":"exact"},{"name":"negative regulation of protein bioavailability","type":"related"}],"termid":"GO:0035581"}


id: GO:0019081
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65265],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0075523"}]},"cv_name":"biological_process","definition":"A process by which viral mRNA is translated into viral protein, using the host cellular machinery.","definition_xrefs":["GOC:bf","GOC:jl","ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral gene expression","termid":"GO:0019080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral translation","references_by_uniquename":{"GO_REF:0000043":null},"secondary_identifiers":["Reactome:R-HSA-9683701","Reactome:R-HSA-9694635","Reactome:R-HSA-9727281"],"synonyms":[{"name":"viral protein anabolism","type":"exact"},{"name":"viral protein biosynthesis","type":"exact"},{"name":"viral protein biosynthetic process","type":"exact"},{"name":"viral protein formation","type":"exact"},{"name":"viral protein synthesis","type":"exact"}],"termid":"GO:0019081","terms_by_termid":{"GO:0075523":null}}


id: MONDO:0013697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 29","secondary_identifiers":["MEDGEN:482155","UMLS:C3280525","DOID:0081192","GARD:22554","OMIM:614333"],"synonyms":[{"name":"MRT29","type":"exact"},{"name":"intellectual disability, autosomal recessive 29","type":"exact"},{"name":"mental retardation, autosomal recessive 29","type":"related"}],"termid":"MONDO:0013697","xrefs":{"Monarch":{"xref_id":"0013697"}}}


id: MONDO:0100234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, cardiac rhythm disease characterized by ventricular fibrillation in the absence of any structural or functional heart disease, or known repolarization abnormalities. The presence of J waves is associated with a higher risk of nocturnal ventricular fibrillation events and a higher risk of recurrence.","definition_xrefs":["Orphanet:228140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular fibrillation","termid":"MONDO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"paroxysmal familial ventricular fibrillation","secondary_identifiers":["MEDGEN:83310","GARD:4227","UMLS:C0340493"],"synonyms":[{"name":"IVF","type":"exact"},{"name":"idiopathic ventricular fibrillation","type":"exact"},{"name":"idiopathic ventricular fibrillation, non Brugada type","type":"exact"},{"name":"paroxysmal familial ventricular fibrillation","type":"exact"},{"name":"paroxysmal familial ventricular fibrillation (disorder)","type":"exact"},{"name":"paroxysmal ventricular fibrillation","type":"exact"},{"name":"ventricular fibrillation, paroxysmal familial","type":"exact"}],"termid":"MONDO:0100234","xrefs":{"Monarch":{"xref_id":"0100234"}}}


id: PBO:0005204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec15 (predicted)","termid":"PBO:0005204"}


id: GO:1902354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any blood vessel endothelial cell delamination that is involved in blood vessel lumen ensheathment.","definition_xrefs":["GOC:dgh","GOC:TermGenie","PMID:23698350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell delamination","termid":"GO:0097497"},{"relation_name":"part_of","term_name":"blood vessel lumen ensheathment","termid":"GO:0097496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"blood vessel endothelial cell delamination involved in blood vessel lumen ensheathment","termid":"GO:1902354"}


id: PBO:0048683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 2","termid":"PBO:0048683"}


id: GO:0120313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oocyte karyosome formation, the chromosome organization process in which meiotic chromosomes in the oocyte nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["GOC:krc","GOC:ha","PMID:33382409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"oocyte karyosome formation","termid":"GO:0030717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of oocyte karyosome formation","termid":"GO:0120313"}


id: PBO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint kinase Bub1","termid":"PBO:0018175"}


id: PBO:0082178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase activating protein (ARF GAP); involved in ER-Golgi transport; required for prospore membrane formation; regulates phospholipase Spo14p; shares functional similarity with Glo3p; GCS1 has a paralog, SPS18, that arose from the whole genome duplication","termid":"PBO:0082178"}


id: SO:0001140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Gamma turns, defined for 3 residues i, i+1, i+2 if a hydrogen bond exists between residues i and i+2 and the phi and psi angles of residue i+1 fall within 40 degrees: phi(i+1)=-79.0 - psi(i+1)=69.0.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma_turn","termid":"SO:0001138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"gamma_turn_inverse","secondary_identifiers":["BS:00221"],"synonyms":[{"name":"gamma turn inverse","type":"exact"}],"termid":"SO:0001140"}


id: GO:0008405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-11,12-epoxyeicosatrienoic acid.","definition_xrefs":["RHEA:51480","PMID:10681399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate epoxygenase activity","termid":"GO:0008392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"arachidonate 11,12-epoxygenase activity","synonyms":[{"name":"arachidonic acid 11,12-epoxygenase activity","type":"exact"},{"name":"cytochrome P450 CYP2C38","type":"narrow"}],"termid":"GO:0008405"}


id: GO:0016894
data:
  {"annotated_genes":["SJAG_04907","SJAG_04752","SJAG_05237","SJAG_00754","SJAG_01044","SJAG_02708","SJAG_00623","SJAG_03675","SJAG_01260","SJAG_03328"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[94241,59418,96426,101017,116554,100666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"},{"annotations":[105398,100293,117121,100831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks to yield 3'-phosphomonoesters.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease activity","termid":"GO:0004519"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_00754":null,"SJAG_01044":null,"SJAG_01260":null,"SJAG_02708":null,"SJAG_03328":null,"SJAG_03675":null,"SJAG_04752":null,"SJAG_04907":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.31.1"],"synonyms":[{"name":"3'-endonuclease activity","type":"exact"},{"name":"endoribonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","type":"related"}],"termid":"GO:0016894","terms_by_termid":{"GO:0000213":null,"GO:0008821":null,"GO:0048257":null}}


id: MONDO:0024612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The manic phase of bipolar disorder.","definition_xrefs":["NCIT:C34805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manic bipolar affective disorder","secondary_identifiers":["MEDGEN:7460","SCTID:191618007","UMLS:C0024713"],"synonyms":[{"name":"bipolar affective disorder, current episode manic","type":"exact"},{"name":"manic bipolar affective disorder","type":"exact"},{"name":"manic-depressive - now manic","type":"related"}],"termid":"MONDO:0024612","xrefs":{"Monarch":{"xref_id":"0024612"}}}


id: MONDO:0031052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 106","secondary_identifiers":["MEDGEN:1823985","DOID:0070392","UMLS:C5774212","OMIM:620028"],"synonyms":[{"name":"DEE106","type":"exact"},{"name":"developmental and epileptic encephalopathy 106","type":"exact"}],"termid":"MONDO:0031052","xrefs":{"Monarch":{"xref_id":"0031052"}}}


id: GO:0043557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the frequency, rate or extent of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"},{"relation_name":"part_of","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}


id: GO:0070994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus indicating oxidative stress is received and converted into a molecular signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of oxidative stress","termid":"GO:0070994"}


id: GO:0032841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to calcitonin, a peptide hormone responsible for reducing serum calcium levels by inhibiting osteoclastic bone reabsorption and promoting renal calcium excretion. It is synthesized and released by the C cells of the thyroid.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family binding","termid":"GO:0097644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calcitonin binding","termid":"GO:0032841"}


id: GO:1902174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of keratinocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:rl","GOC:TermGenie","PMID:18938133","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of keratinocyte apoptotic process","termid":"GO:1902172"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"positively_regulates","term_name":"keratinocyte apoptotic process","termid":"GO:0097283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte apoptotic process","synonyms":[{"name":"activation of keratinocyte apoptosis","type":"narrow"},{"name":"activation of keratinocyte apoptotic process","type":"narrow"},{"name":"positive regulation of keratinocyte apoptosis","type":"narrow"},{"name":"up regulation of keratinocyte apoptosis","type":"narrow"},{"name":"up regulation of keratinocyte apoptotic process","type":"exact"},{"name":"up-regulation of keratinocyte apoptosis","type":"narrow"},{"name":"up-regulation of keratinocyte apoptotic process","type":"exact"},{"name":"upregulation of keratinocyte apoptosis","type":"narrow"},{"name":"upregulation of keratinocyte apoptotic process","type":"exact"}],"termid":"GO:1902174"}


id: GO:0005134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-2 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-2 receptor binding","synonyms":[{"name":"IL-2","type":"narrow"},{"name":"interleukin-2 receptor ligand","type":"narrow"}],"termid":"GO:0005134"}


id: GO:0045557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of the TRAIL (TNF-related apoptosis inducing ligand) receptor.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete TRAIL receptor biosynthetic process (obsolete GO:0045557)","synonyms":[{"name":"TRAIL receptor anabolism","type":"exact"},{"name":"TRAIL receptor biosynthesis","type":"exact"},{"name":"TRAIL receptor formation","type":"exact"},{"name":"TRAIL receptor synthesis","type":"exact"}],"termid":"GO:0045557"}


id: FYPO:0000600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuolar transport begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of vacuolar transport","synonyms":[{"name":"delayed onset of vacuolar protein transport","type":"narrow"},{"name":"delayed onset of vacuolar transport during mitotic cell cycle","type":"related"},{"name":"delayed onset of vacuolar transport during vegetative growth","type":"exact"},{"name":"delayed vacuolar transport","type":"exact"},{"name":"vacuolar transport: delayed","type":"related"}],"termid":"FYPO:0000600"}


id: FYPO:0002037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an endodeoxyribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endodeoxyribonuclease activity","termid":"FYPO:0002036"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased endodeoxyribonuclease activity","synonyms":[{"name":"reduced endodeoxyribonuclease activity","type":"exact"}],"termid":"FYPO:0002037"}


id: PBO:0087731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Shu complex (aka PCSS complex); Shu complex also includes Psy3, Shu1, Shu2, and promotes error-free DNA repair; Shu complex mediates inhibition of Srs2p anti-recombinase function; promotes formation of Rad51p filaments; Psy3p and Csm2p contain similar DNA-binding regions which work together to form a single DNA binding site; required for accurate chromosome segregation during meiosis","termid":"PBO:0087731"}


id: GO:0006143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete purine metabolic process (obsolete GO:0006143)","synonyms":[{"name":"purine metabolic process","type":"exact"}],"termid":"GO:0006143"}


id: PBO:0083343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene CMP2/YML057W","termid":"PBO:0083343"}


id: GO:0008135
data:
  {"annotated_genes":["SJAG_05271","SJAG_03996","SJAG_02017","SJAG_02164","SJAG_01851","SJAG_02812","SJAG_03678","SJAG_01659","SJAG_05332","SJAG_04772","SJAG_03223","SJAG_01487","SJAG_01643","SJAG_04900","SJAG_03472","SJAG_05003","SJAG_04283","SJAG_03147","SJAG_03232","SJAG_02995","SJAG_02601","SJAG_02471","SJAG_04981","SJAG_02856","SJAG_01954","SJAG_05221","SJAG_01518","SJAG_00466","SJAG_03629","SJAG_03433","SJAG_04891","SJAG_02376","SJAG_03461","SJAG_02180","SJAG_03788","SJAG_02189","SJAG_01576","SJAG_01117","SJAG_02738","SJAG_04635","SJAG_00507","SJAG_04157","SJAG_04744","SJAG_01696","SJAG_02353","SJAG_00662","SJAG_01438","SJAG_02493","SJAG_02628","SJAG_00786","SJAG_02390","SJAG_02307","SJAG_00338","SJAG_00308","SJAG_03732"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93110,112316,117920,94846,94628,108631,116398,102373,94629,117921,111594,97810,93112,108630,118394,114172,97811,117919,111855,111854,93111,118393,111853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003746"},{"annotations":[113421,97293,98432,94295,102700,110067,110153,110793,97313,104794,96167,97889,115063,96358,104237,106487,95375,102122,99997,103542,105059,87044,104891,97232,89876,106778,99598,105078,96089,89417,96738,105087,89454,92279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003743"},{"annotations":[116941,90608,115480,95442,106647,98157,101560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003747"},{"annotations":[98158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016150"},{"annotations":[90609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016149"},{"annotations":[94630,108633,94631,104185,108632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008079"}]},"cv_name":"molecular_function","definition":"Functions during translation by binding to RNA during polypeptide synthesis at the ribosome.","definition_xrefs":["GOC:vw","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation regulator activity, nucleic acid binding","termid":"GO:0090079"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00338":null,"SJAG_00466":null,"SJAG_00507":null,"SJAG_00662":null,"SJAG_00786":null,"SJAG_01117":null,"SJAG_01438":null,"SJAG_01487":null,"SJAG_01518":null,"SJAG_01576":null,"SJAG_01643":null,"SJAG_01659":null,"SJAG_01696":null,"SJAG_01851":null,"SJAG_01954":null,"SJAG_02017":null,"SJAG_02164":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02307":null,"SJAG_02353":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02471":null,"SJAG_02493":null,"SJAG_02601":null,"SJAG_02628":null,"SJAG_02738":null,"SJAG_02812":null,"SJAG_02856":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03223":null,"SJAG_03232":null,"SJAG_03433":null,"SJAG_03461":null,"SJAG_03472":null,"SJAG_03629":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03788":null,"SJAG_03996":null,"SJAG_04157":null,"SJAG_04283":null,"SJAG_04635":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null,"SJAG_05003":null,"SJAG_05221":null,"SJAG_05271":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0045182","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"translation factor activity, RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"translation factor activity, nucleic acid binding","type":"broad"}],"termid":"GO:0008135","terms_by_termid":{"GO:0003743":null,"GO:0003746":null,"GO:0003747":null,"GO:0008079":null,"GO:0016149":null,"GO:0016150":null}}


id: PBO:0046492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ERG","termid":"PBO:0046492"}


id: MONDO:0000936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious meningitis caused by infection with Treponema.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Treponema infectious disease","termid":"MONDO:0007000"},{"relation_name":"is_a","term_name":"bacterial meningitis caused by gram-negative bacteria","termid":"MONDO:0041825"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syphilitic meningitis","secondary_identifiers":["MESH:C536775","DOID:10073","ICD9:094.2","MEDGEN:57546","SCTID:301086002","UMLS:C0153166"],"synonyms":[{"name":"Treponema caused infectious meningitis","type":"exact"},{"name":"Treponema infectious meningitis","type":"exact"},{"name":"meningeal syphilis","type":"related"},{"name":"meningitis, syphilitic","type":"related"},{"name":"syphilitic aseptic meningitis","type":"related"}],"termid":"MONDO:0000936","xrefs":{"Monarch":{"xref_id":"0000936"}}}


id: PBO:0116300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; negative regulator of Mic10p oligomerization; Mic26p is a non-essential component of the complex; orthologous to human APOO and APOOL","termid":"PBO:0116300"}


id: FYPO:0002061
data:
  {"alleles_by_uniquename":{"SJAG_02409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02409","name":"stc1delta","uniquename":"SJAG_02409:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03916:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03916","name":"chp1delta","uniquename":"SJAG_03916:allele-1"},"SJAG_04061:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04061","name":"arb2delta","uniquename":"SJAG_04061:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118597],"is_not":false,"summary":null,"term":"FYPO:0002061"}],"single_locus_phenotype":[{"annotations":[118580,118581,118582,118583,118584,118585,118586,118596],"is_not":false,"summary":null,"term":"FYPO:0002061"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which all cells in the population are inviable in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell population","termid":"FYPO:0002059"}],"gene_count":9,"genes_by_uniquename":{"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03356":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04061":null,"SJAG_04574":null},"genotype_count":9,"genotypes_by_uniquename":{"ago1delta":{"display_name":"ago1delta","display_uniquename":"ago1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]}]},"arb1delta":{"display_name":"arb1delta","display_uniquename":"arb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02594:allele-1","expression":"Null"}]}]},"arb2delta":{"display_name":"arb2delta","display_uniquename":"arb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04061:allele-1","expression":"Null"}]}]},"chp1delta":{"display_name":"chp1delta","display_uniquename":"chp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03916:allele-1","expression":"Null"}]}]},"clr4delta":{"display_name":"clr4delta","display_uniquename":"clr4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]}]},"clr4delta__leo1delta":{"display_name":"clr4delta leo1delta","display_uniquename":"clr4delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"rdp1delta":{"display_name":"rdp1delta","display_uniquename":"rdp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03356:allele-1","expression":"Null"}]}]},"stc1delta":{"display_name":"stc1delta","display_uniquename":"stc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02409:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002059"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002059","FYPO:0002057"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_04574"],"name":"inviable vegetative cell population","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689","SJAG_03916","SJAG_02594","SJAG_03356","SJAG_02621","SJAG_04061","SJAG_02409","SJAG_04574"],"single_locus_genotype_uniquenames":["arb2delta","arb1delta","ago1delta","chp1delta","rdp1delta","dcr1delta","stc1delta","clr4delta"],"synonyms":[{"name":"essential in vegetative cell population","type":"related"},{"name":"inviable","type":"broad"},{"name":"inviable cell population during vegetative growth","type":"exact"},{"name":"inviable population","type":"broad"},{"name":"inviable vegetative cell population during mitotic cell cycle","type":"related"},{"name":"lethal","type":"broad"},{"name":"lethal in vegetative cell population","type":"exact"},{"name":"lethal population","type":"broad"}],"termid":"FYPO:0002061","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0002061":null}}


id: PBO:0039382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase","termid":"PBO:0039382"}


id: PBO:0029078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-third_meiotic_division","termid":"PBO:0029078"}


id: GO:0019042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which, after initial infection, a virus lies dormant within a cell and viral production ceases. The process ends when the virus switches from latency and starts to replicate.","definition_xrefs":["GOC:jl","VZ:3970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral latency","secondary_identifiers":["GO:0075710","GO:0030069"],"synonyms":[{"name":"latent virus infection","type":"exact"},{"name":"phage lysogeny","type":"exact"},{"name":"viral dormancy","type":"exact"}],"termid":"GO:0019042"}


id: PBO:0044189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsinogen B2","termid":"PBO:0044189"}


id: PBO:0058455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5094","termid":"PBO:0058455"}


id: GO:0033703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-beta-hydroxy-5-beta-pregnane-20-one + NADP+ = 5-beta-pregnan-3,20-dione + H+ + NADPH.","definition_xrefs":["RHEA:22944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-beta-hydroxy-5-beta-steroid dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:1.1.1.277-RXN","EC:1.1.1.277","KEGG_REACTION:R06166"],"synonyms":[{"name":"3beta-hydroxy-5beta-steroid:NADP+ 3-oxidoreductase activity","type":"related"},{"name":"3beta-hydroxysteroid 5beta-oxidoreductase activity","type":"related"},{"name":"3beta-hydroxysteroid 5beta-progesterone oxidoreductase activity","type":"related"}],"termid":"GO:0033703"}


id: PBO:0058650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6779","termid":"PBO:0058650"}


id: GO:0030860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polarized epithelial cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"polarized epithelial cell differentiation","termid":"GO:0030859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of polarized epithelial cell differentiation","termid":"GO:0030860"}


id: PBO:0064538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin B (pseudogene)","termid":"PBO:0064538"}


id: GO:0098978
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses glutamate as a neurotransmitter.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glutamatergic synapse","termid":"GO:0098978"}


id: PR:O94248
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A midasin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04871","PANTHER:PTHR22908:SF14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.08","secondary_identifiers":["UniProtKB:O94248"],"synonyms":[{"name":"MIDAS-containing protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MDN1","type":"exact"}],"termid":"PR:O94248"}


id: PBO:0064022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 56","termid":"PBO:0064022"}


id: PBO:0058402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4773-1","termid":"PBO:0058402"}


id: GO:0051230
data:
  {"annotated_genes":["SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"}]},"cv_name":"biological_process","definition":"The controlled breakdown of the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"spindle disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle breakdown","type":"exact"},{"name":"spindle catabolism","type":"exact"},{"name":"spindle degradation","type":"exact"}],"termid":"GO:0051230","terms_by_termid":{"GO:0051228":null}}


id: PBO:0056950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 16-2","termid":"PBO:0056950"}


id: PBO:0029765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_double-strand_break_site","termid":"PBO:0029765"}


id: SO:0001036
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has an arginine anticodon, and a 3' arginine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"arginine_tRNA_primary_transcript","termid":"SO:0000212"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginyl_tRNA","synonyms":[{"name":"arginyl tRNA","type":"exact"}],"termid":"SO:0001036"}


id: PBO:0074902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 74B","termid":"PBO:0074902"}


id: PBO:0076342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYT9 antisense RNA 1","termid":"PBO:0076342"}


id: GO:0045095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"keratin filament","synonyms":[{"name":"acidic keratin","type":"related"},{"name":"basic/neutral keratin","type":"related"}],"termid":"GO:0045095"}


id: PBO:0109352
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(16)","termid":"PBO:0109352"}


id: GO:0032276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a gonadotropin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"gonadotropin secretion","termid":"GO:0032274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of gonadotropin secretion","synonyms":[{"name":"regulation of gonadotrophin secretion","type":"exact"}],"termid":"GO:0032276"}


id: PBO:0082401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0082401"}


id: MONDO:0009333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mullerian derivatives-lymphangiectasia-polydactyly syndrome is characterized by prenatal linear growth deficiency, hypertrophied alveolar ridges, redundant nuchal skin, postaxial polydactyly and cryptorchidism. Mullerian duct remnants, lymphangiectasis, and renal anomalies are also present. Three cases have been described. A small penis was observed in two of these cases. The syndrome is likely to be an autosomal recessive or X-linked trait. All the reported patients died neonatally of hepatic failure.","definition_xrefs":["Orphanet:1655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"mullerian derivatives-lymphangiectasia-polydactyly syndrome","secondary_identifiers":["MEDGEN:343489","UMLS:C1856159","MESH:C536478","GARD:5430","OMIM:235255"],"synonyms":[{"name":"MULLERIAN derivatives, persistence of, with lymphangiectasia and postaxial polydactyly","type":"related"},{"name":"Müllerian derivatives-lymphangiectasia-polydactyly syndrome","type":"related"},{"name":"Urioste syndrome","type":"related"},{"name":"persistence of mullerian derivatives with lymphangiectasia and postaxial polydactyly","type":"related"},{"name":"renal and craniofacial anomalies with persistence of mullerian derivatives, lymphangiectasis, hepatic failure, postaxial polydactyly","type":"related"}],"termid":"MONDO:0009333","xrefs":{"Monarch":{"xref_id":"0009333"}}}


id: PBO:0073421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEZ6L antisense RNA 1","termid":"PBO:0073421"}


id: MOD:02072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-serine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}


id: GO:0035052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of dorsal vessel cardioblast cells to an aortic cell fate and their capacity to differentiate into aortic cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","PMID:12397110","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"embryonic heart tube anterior/posterior pattern specification","termid":"GO:0035054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal vessel aortic cell fate commitment","termid":"GO:0035052"}


id: MONDO:0019836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital anomaly of hepatic vein","secondary_identifiers":["UMLS:C3163825","MEDGEN:756237","Orphanet:95507","GARD:19282"],"termid":"MONDO:0019836","xrefs":{"Monarch":{"xref_id":"0019836"}}}


id: MOD:01655
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride, to form an alpha-amino-Dansyl-derivatized residue.","definition_xrefs":["Unimod:139#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dansyl chloride derivatized residue","termid":"MOD:01653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dansyl derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"N2DansylRes","type":"exact"}],"termid":"MOD:01655"}


id: PBO:0058108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4323","termid":"PBO:0058108"}


id: GO:0051518
data:
  {"annotated_genes":["SJAG_03581","SJAG_02392","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89375,94083,95351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of unidimensional cell growth","termid":"GO:0051512"},{"relation_name":"is_a","term_name":"regulation of bipolar cell growth","termid":"GO:0051516"},{"relation_name":"positively_regulates","term_name":"bipolar cell growth","termid":"GO:0042815"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stimulation of bipolar cell growth","type":"narrow"},{"name":"up regulation of bipolar cell growth","type":"exact"},{"name":"up-regulation of bipolar cell growth","type":"exact"},{"name":"upregulation of bipolar cell growth","type":"exact"}],"termid":"GO:0051518","terms_by_termid":{"GO:0051519":null}}


id: PBO:0063837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phosphohydroxy-L-lysine phospho-lyase","termid":"PBO:0063837"}


id: MONDO:1010793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in dogs in which the cause of the disease is a mutation in the COL5A1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, dog","termid":"MONDO:1011493"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic type, COL5A1-related, dog","secondary_identifiers":["OMIA:002165-9615"],"synonyms":[{"name":"cEDS","type":"exact"}],"termid":"MONDO:1010793","xrefs":{"Monarch":{"xref_id":"1010793"}}}


id: GO:0035873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which lactate is transported across a membrane. Lactate is 2-hydroxypropanoate, CH3-CHOH-COOH; L(+)-lactate is formed by anaerobic glycolysis in animal tissues, and DL-lactate is found in sour milk, molasses and certain fruit juices.","definition_xrefs":["ISBN:0198506732","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate transport","termid":"GO:0015727"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"lactate transmembrane transport","synonyms":[{"name":"lactate membrane transport","type":"exact"}],"termid":"GO:0035873"}


id: PBO:0071412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 18","termid":"PBO:0071412"}


id: MONDO:0015402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mandibular arteriovenous malformation is a rare vascular anomaly characterized by an abnormal connection of the arterial and venous vasculature, without capillary connections, in the mandibular area, commonly presenting with minor gingival bleeding, dental loosening, lower lip numbness, facial deformity and malocclusion. This usually high-flow vascular malformation may also present with potentially life-threatening, spontaneous, or tooth extraction-induced, hemorrhagic shock.","definition_xrefs":["Orphanet:141174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial arteriovenous malformation","termid":"MONDO:0015500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mandibular arteriovenous malformation","secondary_identifiers":["GARD:19957","icd11.foundation:113998538","SCTID:703334000","MEDGEN:825297","UMLS:C3839452"],"synonyms":[{"name":"arteriovenous malformation of mandible","type":"exact"}],"termid":"MONDO:0015402","xrefs":{"Monarch":{"xref_id":"0015402"}}}


id: MOD:01578
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01578"}


id: GO:0043833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [methyl-Co(III) methylamine-specific corrinoid protein] + coenzyme M = [Co(I) methylamine-specific corrinoid protein] + H+ + methyl-coenzyme M. This reaction is the transfer of the methyl group from the methylated corrinoid cofactor of a methylamine corrinoid protein to coenzyme M.","definition_xrefs":["RHEA:18773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"[methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase activity","secondary_identifiers":["EC:2.1.1.247"],"synonyms":[{"name":"MT2-A","type":"broad"},{"name":"methylamine-specific methylcobalamin:CoM methyltransferase activity","type":"exact"},{"name":"methylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"exact"},{"name":"methylcobamide:CoM methyltransferase activity","type":"broad"},{"name":"methylcobamide:coenzyme M methyltransferase activity","type":"broad"},{"name":"monomethylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"narrow"}],"termid":"GO:0043833"}


id: GO:0036388
data:
  {"annotated_genes":["SJAG_02607","SJAG_00247","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114464,110013,102806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the pre-replicative complex, a protein-DNA complex that forms at the origin of replication during the initial step of DNA replication and allows the origin to become competent, or 'licensed', for replication.","definition_xrefs":["GOC:bhm","GOC:jh2","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0044085","GO:0006260","GO:0065003","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"pre-replicative complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-68867"],"synonyms":[{"name":"pre-RC assembly","type":"exact"},{"name":"pre-replication complex assembly","type":"related"}],"termid":"GO:0036388","terms_by_termid":{"GO:1902985":null}}


id: MOD:01825
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-128 reporter+balance group.","definition_xrefs":["PubMed:18688235","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cysTMT6plex-128 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01825"}


id: PBO:0039108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AHNAK nucleoprotein","termid":"PBO:0039108"}


id: PBO:0045302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNM3 intronic transcript 1","termid":"PBO:0045302"}


id: PBO:0088406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7","termid":"PBO:0088406"}


id: PBO:0072458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 22","termid":"PBO:0072458"}


id: MONDO:0002785
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the skull base.","definition_xrefs":["NCIT:C4676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"skull base neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3842","MEDGEN:138208","MESH:D019292","UMLS:C0376527"],"synonyms":[{"name":"basicranium neoplasm","type":"exact"},{"name":"basicranium neoplasm (disease)","type":"exact"},{"name":"basicranium tumor","type":"exact"},{"name":"basicranium tumour","type":"exact"},{"name":"neoplasm of basicranium","type":"exact"},{"name":"neoplasm of skull base","type":"exact"},{"name":"neoplasm of the skull base","type":"exact"},{"name":"skull base cancer","type":"related"},{"name":"skull base neoplasm","type":"exact"},{"name":"skull base tumor","type":"exact"},{"name":"skull base tumour","type":"exact"},{"name":"tumor of basicranium","type":"exact"},{"name":"tumor of skull base","type":"exact"},{"name":"tumor of the skull base","type":"exact"},{"name":"tumors of skull base","type":"exact"},{"name":"tumour of basicranium","type":"exact"},{"name":"tumour of skull base","type":"exact"},{"name":"tumour of the skull base","type":"exact"},{"name":"tumours of skull base","type":"exact"}],"termid":"MONDO:0002785","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0002785"}}}


id: GO:0000156
data:
  {"annotated_genes":["SJAG_02472","SJAG_00318"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68923,111926],"is_not":false,"summary":null,"term":"GO:0000156"}]},"cv_name":"molecular_function","definition":"Responds to a phosphorelay sensor to initiate a change in cell state or activity. The activity of the response regulator is regulated by transfer of a phosphate from a histidine residue in the sensor, to an aspartate residue in the response regulator. Many but not all response regulators act as transcriptional regulators to elicit a response.","definition_xrefs":["PMID:10966457","PMID:11842140","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular transducer activity","termid":"GO:0060089"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00318":null,"SJAG_02472":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"phosphorelay response regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"two-component response regulator activity","type":"narrow"}],"termid":"GO:0000156","terms_by_termid":{"GO:0000156":null}}


id: GO:0051631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter acetylcholine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"regulates","term_name":"acetylcholine uptake","termid":"GO:0051630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of acetylcholine uptake","synonyms":[{"name":"regulation of acetylcholine import","type":"exact"}],"termid":"GO:0051631"}


id: MONDO:0007941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malocclusion due to protuberant upper front teeth","secondary_identifiers":["MEDGEN:331917","OMIM:154300","UMLS:C1835159"],"synonyms":[{"name":"malocclusion due to protuberant upper front teeth","type":"exact"}],"termid":"MONDO:0007941","xrefs":{"Monarch":{"xref_id":"0007941"}}}


id: PBO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualifier","termid":"PBO:0000049"}


id: PBO:0074654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 41B","termid":"PBO:0074654"}


id: PBO:0027963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_level_during_nitrogen_starvation","termid":"PBO:0027963"}


id: GO:0019241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrulline metabolic process","termid":"GO:0000052"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"citrulline catabolic process","secondary_identifiers":["MetaCyc:CITRULLINE-DEG-PWY"],"synonyms":[{"name":"citrulline breakdown","type":"exact"},{"name":"citrulline catabolism","type":"exact"},{"name":"citrulline degradation","type":"exact"}],"termid":"GO:0019241"}


id: FYECO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which iron was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited iron","termid":"FYECO:0000330"}


id: PR:Q9P6N6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 38 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01086","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 38 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.10c","secondary_identifiers":["UniProtKB:Q9P6N6"],"synonyms":[{"name":"Spom972h-SLC25A38","type":"exact"}],"termid":"PR:Q9P6N6"}


id: FYPO:0004960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in the mitochondria is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"},{"relation_name":"is_a","term_name":"normal level of substance in mitochondrion","termid":"FYPO:0004959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitochondrial RNA level","synonyms":[{"name":"normal mitochondrial RNA accumulation","type":"related"},{"name":"normal mitochondrial RNA level during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"normal mitochondrial transcript level","type":"exact"}],"termid":"FYPO:0004960"}


id: PBO:0076653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 10","termid":"PBO:0076653"}


id: PBO:0005443
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.3.2.6","termid":"PBO:0005443"}


id: PBO:0066382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radixin pseudogene 2","termid":"PBO:0066382"}


id: MONDO:0013280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liposarcoma characterized by the presence of round non-lipogenic primitive mesenchymal cells and small signet ring lipoblasts within a myxoid stoma with a branching vascular pattern. This category includes hypercellular lesions with round cell morphology, formerly known as round cell liposarcoma.","definition_xrefs":["NCIT:C27781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myxoid/round cell liposarcoma","termid":"MONDO:0020561"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxoid liposarcoma","secondary_identifiers":["MESH:D018208","DOID:5363","DOID:5709","UMLS:C0206634","ICDO:8852/3","SCTID:404069006","OMIM:613488","MEDGEN:104903","ICD9:171.9","EFO:0000613","GARD:15667"],"synonyms":[{"name":"Myxoliposarcoma","type":"related"},{"name":"mixed-type liposarcoma","type":"related"},{"name":"myxoid liposarcoma","type":"exact"},{"name":"myxoid liposarcoma (morphologic abnormality)","type":"exact"},{"name":"myxoid/round cell liposarcoma","type":"broad"}],"termid":"MONDO:0013280","xrefs":{"Monarch":{"xref_id":"0013280"}}}


id: PBO:0031549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_rDNA_separation","termid":"PBO:0031549"}


id: MONDO:0859254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatorenocardiac degenerative fibrosis","secondary_identifiers":["OMIM:619902","UMLS:C5676996","MEDGEN:1808950"],"termid":"MONDO:0859254","xrefs":{"Monarch":{"xref_id":"0859254"}}}


id: GO:0034924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-3,4-phenanthrenedihydrodiol-4-carboxylate = 3,4-dihydroxyphenanthrene + H+ + 2 e- + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-3,4-phenanthrenedihydrodiol-4-carboxylate dehydrogenase activity (obsolete GO:0034924)","termid":"GO:0034924"}


id: PBO:0045240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 8","termid":"PBO:0045240"}


id: PBO:0113003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease involved in regulation of pseudohyphal growth; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes human Rh factors; expression is under nitrogen catabolite repression regulation; activity is controlled by phospho-silencing; phosphorylation of Mep2 mediated by Npr1; dephosphorylation involves Psr1p and Psr2p; Twin-His motif ensures transport specificity","termid":"PBO:0113003"}


id: GO:0019679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate that occur in the methylcitrate cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"propionate metabolic process, methylcitrate cycle","secondary_identifiers":["MetaCyc:PWY0-42"],"synonyms":[{"name":"propionate metabolism, methylcitrate cycle","type":"exact"}],"termid":"GO:0019679"}


id: PBO:0114426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC6 antisense RNA 1","termid":"PBO:0114426"}


id: PBO:0035922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_acetylation_during_vegetative_growth","termid":"PBO:0035922"}


id: MONDO:0014331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Moyamoya disease with early-onset achalasia is an exceedingly rare autosomal recessive neurological disorder reported only in a few families so far. It is characterized by the association of early onset achalasia (manifesting in infancy) with severe intracranial angiopathy that is consistent with moyamoya angiopathy in most cases (moyamoya disease). Other variable associated manifestations include hypertension, Raynaud phenomenon, and livedo reticularis.","definition_xrefs":["Orphanet:401945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"Moyamoya disease","termid":"MONDO:0016820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Moyamoya disease with early-onset achalasia","secondary_identifiers":["SCTID:718551002","MEDGEN:816733","GARD:17664","OMIM:615750","UMLS:C3810403"],"synonyms":[{"name":"MYMY6","type":"related"},{"name":"Moyamoya disease 6 with achalasia","type":"related"},{"name":"moyamoya 6 with achalasia","type":"exact"}],"termid":"MONDO:0014331","xrefs":{"Monarch":{"xref_id":"0014331"}}}


id: GO:0060171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a stereocilium.","definition_xrefs":["GOC:rph","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"stereocilium membrane","termid":"GO:0060171"}


id: PBO:0030555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_lysine_import","termid":"PBO:0030555"}


id: MONDO:0033533
data:
  {"annotated_genes":["SJAG_05218"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84896],"is_not":false,"summary":null,"term":"MONDO:0033533"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05218":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 45","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112113","UMLS:C5436461","OMIM:618951","MEDGEN:1731010"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 45","type":"related"},{"name":"COXPD45","type":"related"}],"termid":"MONDO:0033533","terms_by_termid":{"MONDO:0033533":null},"xrefs":{"Monarch":{"xref_id":"0033533"}}}


id: GO:0062153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A protein adaptor that recognizes and binds an RNA molecule modified by C5-methylcytidine.","definition_xrefs":["PMID:28418038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"C5-methylcytidine-containing RNA reader activity","synonyms":[{"name":"C5-methylcytidine-containing RNA binding","type":"related"},{"name":"C5-methylcytosine-containing RNA binding","type":"related"}],"termid":"GO:0062153"}


id: GO:0102783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-carotene + 2 O2 = 2 beta-ionone + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-carotene oxygenase activity (obsolete GO:0102783)","termid":"GO:0102783"}


id: PBO:0053980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1293","termid":"PBO:0053980"}


id: GO:0009374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"biotin binding","synonyms":[{"name":"vitamin B7 binding","type":"exact"},{"name":"vitamin H binding","type":"exact"}],"termid":"GO:0009374"}


id: GO:1904255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of an iron transmembrane transporter activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:15514116","GO_REF:0000059","GOC:kom"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of iron ion transmembrane transporter activity (obsolete GO:1904255)","synonyms":[{"name":"down regulation of iron cation channel activity","type":"exact"},{"name":"down regulation of iron channel activity","type":"exact"},{"name":"down regulation of iron-specific channel activity","type":"exact"},{"name":"down-regulation of iron cation channel activity","type":"exact"},{"name":"down-regulation of iron channel activity","type":"exact"},{"name":"down-regulation of iron-specific channel activity","type":"exact"},{"name":"downregulation of iron cation channel activity","type":"exact"},{"name":"downregulation of iron channel activity","type":"exact"},{"name":"downregulation of iron-specific channel activity","type":"exact"},{"name":"inhibition of iron cation channel activity","type":"narrow"},{"name":"inhibition of iron channel activity","type":"narrow"},{"name":"inhibition of iron-specific channel activity","type":"narrow"},{"name":"negative regulation of iron cation channel activity","type":"exact"},{"name":"negative regulation of iron channel activity","type":"exact"},{"name":"negative regulation of iron-specific channel activity","type":"exact"}],"termid":"GO:1904255"}


id: GO:0070214
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the protein-tyrosine kinase CSK and the GTPase-activating protein (GAP)-associated p62 (GAP-A.p62); may mediate translocation of proteins, including GAP and CSK, to membrane or cytoskeletal regions upon c-Src activation.","definition_xrefs":["PMID:7544435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CSK-GAP-A.p62 complex","termid":"GO:0070214"}


id: PBO:0083652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease involved in DNA recombination and repair; subunit of a complex, with Slx4p, that hydrolyzes 5' branches from duplex DNA in response to stalled or converging replication forks; function overlaps with that of Sgs1p-Top3p","termid":"PBO:0083652"}


id: PR:O60138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wbp4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18H10.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.07","synonyms":[{"name":"Spom972h-wbp4","type":"exact"}],"termid":"PR:O60138"}


id: PR:Q9USY8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USY8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16H5.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.15","synonyms":[{"name":"Spom972h-SPBC16H5.15","type":"exact"}],"termid":"PR:Q9USY8"}


id: MONDO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the cerebral artery.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"},{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral arteritis","secondary_identifiers":["ICD9:437.4","UMLS:C0007773","MEDGEN:507535","DOID:11390","SCTID:28366008"],"synonyms":[{"name":"cerebral artery inflammation","type":"exact"},{"name":"inflammation of cerebral artery","type":"exact"}],"termid":"MONDO:0001277","xrefs":{"Monarch":{"xref_id":"0001277"}}}


id: FYPO:0004551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ionizing radiation exposure during mitotic S phase is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to ionizing radiation. The most common abnormality is for the cell cycle to progress as in the absence of ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0003489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during mitotic S phase","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to ionizing radiation during mitotic S phase","type":"exact"},{"name":"abnormal mitotic cell cycle delay following ionizing radiation during mitotic S phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to IR during mitotic S phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during mitotic S phase during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during mitotic S phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to ionizing radiation during mitotic S phase","type":"exact"}],"termid":"FYPO:0004551"}


id: PBO:0031336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_benomyl","termid":"PBO:0031336"}


id: PBO:0057775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2278","termid":"PBO:0057775"}


id: PBO:0059601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 13","termid":"PBO:0059601"}


id: GO:0072518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Rho GTPase-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:ecd","PMID:12778124","PMID:20230755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0004672","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"Rho-dependent protein serine/threonine kinase activity","synonyms":[{"name":"ROCK kinase activity","type":"exact"},{"name":"Rho-associated protein kinase activity","type":"exact"}],"termid":"GO:0072518"}


id: MONDO:0007963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial atypical multiple mole melanoma syndrome","termid":"MONDO:0018453"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 1","secondary_identifiers":["MEDGEN:320506","OMIM:155600","UMLS:C1835047","SCTID:254819008"],"synonyms":[{"name":"B-K Mole syndrome","type":"related"},{"name":"CMM1","type":"related"},{"name":"dysplastic Nevus syndrome, hereditary","type":"related"},{"name":"familial atypical Mole-malignant melanoma syndrome","type":"related"},{"name":"melanoma, cutaneous malignant","type":"related"},{"name":"melanoma, cutaneous malignant, 1","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 1","type":"exact"},{"name":"melanoma, familial","type":"related"},{"name":"melanoma, malignant","type":"related"},{"name":"melanoma, malignant, somatic","type":"exact"}],"termid":"MONDO:0007963","xrefs":{"Monarch":{"xref_id":"0007963"}}}


id: PBO:0089481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topoisomerase II-associated deadenylation-dependent mRNA-decapping factor Pdc2","termid":"PBO:0089481"}


id: GO:1901298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hydrogen peroxide-mediated programmed cell death.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901298"}


id: MONDO:0011143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the GUCY2D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"GUCY2D retinopathy","termid":"MONDO:0100454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 6","secondary_identifiers":["MESH:C538363","OMIM:601777","UMLS:C1866293","GARD:10656","DOID:0111011","MEDGEN:400963"],"synonyms":[{"name":"CORD6","type":"exact"},{"name":"GUCY2D cone-rod dystrophy","type":"exact"},{"name":"RCD2","type":"exact"},{"name":"cone-rod dystrophy 6","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in GUCY2D","type":"exact"},{"name":"cone-rod dystrophy type 6","type":"exact"},{"name":"retinal cone dystrophy 2","type":"exact"}],"termid":"MONDO:0011143","xrefs":{"Monarch":{"xref_id":"0011143"}}}


id: PBO:0051489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 6","termid":"PBO:0051489"}


id: FYPO:0008059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to K48-linked polyubiquitin occurs to a lower extent than normal.","definition_xrefs":["PMID:16138082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased K48-linked polyubiquitin binding","synonyms":[{"name":"decreased K48-linked polyUb binding","type":"exact"}],"termid":"FYPO:0008059"}


id: FYPO:0002355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0002355"}


id: MONDO:0100544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous condition characterized by the gradual, clonal expansion of hematopoietic stem and progenitor cells carrying specific, disruptive, and recurrent genetic variants, in individuals without clear diagnosis of hematological malignancies. It is associated with an increased risk of developing hematologic cancers.","definition_xrefs":["NCIT:C155821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clonal hematopoiesis","termid":"MONDO:0100542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"age-related clonal hematopoiesis","secondary_identifiers":["MEDGEN:1670618","UMLS:C4722404"],"synonyms":[{"name":"ARCH","type":"exact"}],"termid":"MONDO:0100544","xrefs":{"Monarch":{"xref_id":"0100544"}}}


id: GO:0071175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch1 (ICN1), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN1 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch1 complex","type":"exact"}],"termid":"GO:0071175"}


id: PBO:0057522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 640","termid":"PBO:0057522"}


id: PBO:0091905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-galactosyltransferase Gma12","termid":"PBO:0091905"}


id: SO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_insert","synonyms":[{"name":"engineered insert","type":"exact"}],"termid":"SO:0000915"}


id: PR:000027715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spi1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:18422602","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1","synonyms":[{"name":"SPI1","type":"related"},{"name":"spi1","type":"exact"}],"termid":"PR:000027715"}


id: GO:0008074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses guanylate cyclase activity and is not bound to a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"guanylate cyclase complex, soluble","termid":"GO:0008074"}


id: PBO:0055666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 2","termid":"PBO:0055666"}


id: PBO:0062391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 12 pseudogene","termid":"PBO:0062391"}


id: PBO:0044474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 17 subfamily A member 1","termid":"PBO:0044474"}


id: PATO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001071 relative energy (obsolete PATO:0001071)","termid":"PATO:0001071"}


id: MONDO:0015729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 16 is a rare chromosomal anomaly syndrome with a highly variable phenotype ranging from minor anomalies with normal development to intrauterine growth retardation, abnormal skin pigmentation, craniofacial and body asymmetry, cardiac (e.g. ventricular septal defect) and genital (e.g. hypospadias, cryptorchidism) anomalies, scoliosis and hearing loss to neonatal death. Additional features observed include skeletal malformations (e.g. clino/polydactyly, talipes), mild facial dysmorphism, and developmental delay.","definition_xrefs":["Orphanet:1708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 16 trisomy","termid":"MONDO:0022180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 16","secondary_identifiers":["MESH:C538041","UMLS:C4707009","GARD:18741","MEDGEN:1633950","SCTID:764621006"],"synonyms":[{"name":"Mosaic trisomy chromosome 16","type":"exact"},{"name":"Mosaic trisomy type 16","type":"exact"},{"name":"trisomy 16 mosaicism","type":"exact"}],"termid":"MONDO:0015729","xrefs":{"Monarch":{"xref_id":"0015729"}}}


id: PBO:0069140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 391, pseudogene","termid":"PBO:0069140"}


id: PBO:0083861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Farnesyl-diphosphate farnesyl transferase (squalene synthase); joins two farnesyl pyrophosphate moieties to form squalene in the sterol biosynthesis pathway","termid":"PBO:0083861"}


id: PBO:0003087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor A subunit Ssb1","termid":"PBO:0003087"}


id: GO:0033571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lactoferrin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"lactoferrin transport","termid":"GO:0033571"}


id: GO:0004348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine.","definition_xrefs":["EC:3.2.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramidase activity","termid":"GO:0017042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"glucosylceramidase activity","secondary_identifiers":["MetaCyc:GLUCOSYLCERAMIDASE-RXN","RHEA:13269","Reactome:R-HSA-1605591","Reactome:R-HSA-1861788","Reactome:R-HSA-1861789"],"synonyms":[{"name":"D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"related"},{"name":"GlcCer-beta-glucosidase activity","type":"related"},{"name":"acid beta-glucosidase activity","type":"related"},{"name":"beta-D-glucocerebrosidase activity","type":"related"},{"name":"beta-glucocerebrosidase activity","type":"related"},{"name":"beta-glucosylceramidase activity","type":"related"},{"name":"ceramide glucosidase activity","type":"related"},{"name":"glucocerebrosidase activity","type":"related"},{"name":"glucosphingosine glucosylhydrolase activity","type":"related"},{"name":"glucosylcerebrosidase activity","type":"related"},{"name":"glucosylsphingosine beta-D-glucosidase activity","type":"related"},{"name":"glucosylsphingosine beta-glucosidase activity","type":"related"},{"name":"psychosine hydrolase activity","type":"related"}],"termid":"GO:0004348"}


id: PBO:0108624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1101/ mitochondrial ribosome assembly protein Rsm22 fusion protein","termid":"PBO:0108624"}


id: MONDO:0000077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nystagmus (obsolete MONDO:0000077)","synonyms":[{"name":"obsolete nystagmus (disease)","type":"exact"}],"termid":"MONDO:0000077","xrefs":{"Monarch":{"xref_id":"0000077"}}}


id: PBO:0065045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3A","termid":"PBO:0065045"}


id: MONDO:0013644
data:
  {"annotated_genes":["SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85351],"is_not":false,"summary":null,"term":"MONDO:0013644"}]},"cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease in which the cause of the disease is a mutation in the DYNC1H1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"},{"relation_name":"is_a","term_name":"dyneinopathy","termid":"MONDO:1040031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2O","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12434","OMIM:614228","Orphanet:284232","MEDGEN:481850","UMLS:C3280220","DOID:0110175"],"synonyms":[{"name":"CMT2O","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in DYNC1H1","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2O","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2O","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 20","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2O","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy axonal type 2O","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, axonal, type 2O","type":"related"},{"name":"DYNC1H1 Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2O","type":"exact"},{"name":"autosomal dominant axonal Charcot-Marie-Tooth disease type 2O","type":"exact"}],"termid":"MONDO:0013644","terms_by_termid":{"MONDO:0013644":null},"xrefs":{"Monarch":{"xref_id":"0013644"}}}


id: GO:0046936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyadenosine + H+ + H2O = 2'-deoxyinosine + NH4+.","definition_xrefs":["GOC:ai","RHEA:28190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2'-deoxyadenosine deaminase activity","secondary_identifiers":["MetaCyc:ADDALT-RXN"],"synonyms":[{"name":"deoxyadenosine deaminase reaction","type":"exact"}],"termid":"GO:0046936"}


id: PBO:0047746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 10","termid":"PBO:0047746"}


id: MONDO:0859149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypertriglyceridemia","termid":"MONDO:0005347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypertriglyceridemia 2","secondary_identifiers":["UMLS:C5543398","OMIM:619324","MEDGEN:1783778"],"termid":"MONDO:0859149","xrefs":{"Monarch":{"xref_id":"0859149"}}}


id: PBO:0029985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ubiquitin_ligase_activity","termid":"PBO:0029985"}


id: FYPO:0006699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylcysteine sulfoxide measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular hercynylcysteine sulfoxide level during vegetative growth","synonyms":[{"name":"decreased cellular hercynylcysteine sulfoxide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular hercynylcysteine sulphoxide level during vegetative growth","type":"exact"},{"name":"decreased hercynylcysteine sulfoxide level during vegetative growth","type":"exact"},{"name":"reduced cellular hercynylcysteine sulfoxide level during vegetative growth","type":"exact"}],"termid":"FYPO:0006699"}


id: PBO:0062574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 3","termid":"PBO:0062574"}


id: MOD:00345
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-phenylalanine residue by a thioether bond to form 2-(S-L-cysteinyl)-L-phenylalanine.","definition_xrefs":["PubMed:3936839","PubMed:12696888","RESID:AA0340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(S-L-cysteinyl)-L-phenylalanine","synonyms":[{"name":"(2R)-2-amino-2-[(2R)-2-amino-2-carboxyethyl]sulfanyl-3-phenylpropanoic acid","type":"exact"},{"name":"(2R,5R)-2,5-diamino-3-thia-2-phenylmethylhexanedioic acid","type":"exact"},{"name":"2-(L-cystein-S-yl)-L-phenylalanine","type":"exact"},{"name":"CROSSLNK 2-cysteinyl-L-phenylalanine (Cys-Phe)","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-L-phenylalanine","type":"exact"}],"termid":"MOD:00345"}


id: MONDO:0017899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant (AD) mendelian susceptibility to mycobacterial diseases (MSMD) due to a partial deficiency describes a group of variants of MSMD due to dominantly inherited partial deficiencies in interferon gamma receptor 1 (IFN-gammaR1), IFN-gammaR2, signal transducer and activator of transcription 1 (STAT1) or interferon regulator factor 8 (IRF8).","definition_xrefs":["Orphanet:319543"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency (obsolete MONDO:0017899)","synonyms":[{"name":"autosomal dominant MSMD due to a partial deficiency","type":"exact"},{"name":"mendelian susceptibility to mycobacterial diseases due to a partial deficiency, autosomal dominant","type":"exact"}],"termid":"MONDO:0017899","xrefs":{"Monarch":{"xref_id":"0017899"}}}


id: PBO:0077334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 71","termid":"PBO:0077334"}


id: PBO:0067615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 787, pseudogene","termid":"PBO:0067615"}


id: GO:0036302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the atrioventricular canal over time, from its formation to the mature structure. The atrioventricular canal is the part of the heart connecting the atrium to the cardiac ventricle.","definition_xrefs":["ZFA:0001315","GOC:gr","GOC:BHF","UBERON:0002087","PMID:14701881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular canal development","termid":"GO:0036302"}


id: GO:0062061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a TAP complex.","definition_xrefs":["PMID:17947644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TAP complex binding","termid":"GO:0062061"}


id: PBO:0088048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin C-terminal hydrolase; cleaves ubiquitin-protein fusions to generate monomeric ubiquitin; hydrolyzes the peptide bond at the C-terminus of ubiquitin; also the major processing enzyme for the ubiquitin-like protein Rub1p","termid":"PBO:0088048"}


id: GO:0016407
data:
  {"annotated_genes":["SJAG_04107","SJAG_02165","SJAG_01877","SJAG_04535","SJAG_02726","SJAG_04791","SJAG_02158","SJAG_02990","SJAG_00676","SJAG_04756","SJAG_05413","SJAG_01619","SJAG_00695","SJAG_02309","SJAG_03112","SJAG_02654","SJAG_03288","SJAG_00866","SJAG_03537","SJAG_02296","SJAG_04305","SJAG_01826","SJAG_02773","SJAG_00413","SJAG_00246","SJAG_01204","SJAG_03162","SJAG_01899","SJAG_03305","SJAG_00395","SJAG_04131","SJAG_04631","SJAG_01638","SJAG_01592","SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90759],"is_not":false,"summary":null,"term":"GO:0016407"},{"annotations":[100235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004313"},{"annotations":[105995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"},{"annotations":[100116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004059"},{"annotations":[92267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046941"},{"annotations":[87748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047198"},{"annotations":[86928,100117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004145"},{"annotations":[117896,113682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004742"},{"annotations":[70472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004343"},{"annotations":[102113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004358"},{"annotations":[69468,104358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016287"},{"annotations":[117981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[90924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010484"},{"annotations":[90925,90272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[90926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[98470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[108784,108783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[90927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[98471,117982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[87945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[87946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[87947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"},{"annotations":[110543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004414"},{"annotations":[111358,102114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004042"},{"annotations":[116696,102075,110567,102510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008080"},{"annotations":[103067,114792,117427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004596"},{"annotations":[98474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034212"},{"annotations":[88909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008999"},{"annotations":[88910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990190"},{"annotations":[103478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061733"},{"annotations":[103068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120518"},{"annotations":[88911,117983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990189"},{"annotations":[111515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046027"},{"annotations":[92124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990883"},{"annotations":[101383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009001"},{"annotations":[92126,106790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051392"},{"annotations":[94970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106261"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acetyl group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl 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id: GO:0035246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group onto a nitrogen atom of an arginine residue in a protein.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine methylation","termid":"GO:0018216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine N-methylation","termid":"GO:0035246"}


id: PBO:0088611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim9-Tim10 complex subunit Tim10","termid":"PBO:0088611"}


id: PBO:0054085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1436","termid":"PBO:0054085"}


id: PBO:0056568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipin TRP cation channel 3","termid":"PBO:0056568"}


id: SO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_secondary_structure","synonyms":[{"name":"INSDC_feature:misc_structure","type":"exact"},{"name":"sequence secondary structure","type":"exact"}],"termid":"SO:0000002"}


id: GO:0071655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of granulocyte colony-stimulating factor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor production","termid":"GO:1901256"},{"relation_name":"regulates","term_name":"granulocyte colony-stimulating factor production","termid":"GO:0071611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of granulocyte colony-stimulating factor production","synonyms":[{"name":"regulation of CSF3 production","type":"exact"},{"name":"regulation of G-CSF production","type":"exact"},{"name":"regulation of colony stimulating factor 3 (granulocyte) production","type":"exact"},{"name":"regulation of filgrastim production","type":"exact"},{"name":"regulation of granulocyte colony stimulating factor production","type":"exact"},{"name":"regulation of lenograstim production","type":"exact"},{"name":"regulation of pluripoietin production","type":"exact"}],"termid":"GO:0071655"}


id: PBO:0090149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear poly(A) binding protein Nab2","termid":"PBO:0090149"}


id: GO:0008144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a drug, a naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism;typically used in the diagnosis, prevention, or treatment of disease.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete drug binding (obsolete GO:0008144)","termid":"GO:0008144"}


id: PBO:0068542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 148, pseudogene","termid":"PBO:0068542"}


id: PBO:0086201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; likely functions in cristae junction formation; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086201"}


id: GO:0021886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron located in the hypothalamus. These neurons release gonadotrophin-releasing hormone as a neural transmitter.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothalamus cell differentiation","termid":"GO:0021979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron differentiation","type":"exact"}],"termid":"GO:0021886"}


